Tan0002476 (gene) Snake gourd v1

Overview
NameTan0002476
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCCHC-type domain-containing protein
LocationLG11: 39559201 .. 39561413 (+)
RNA-Seq ExpressionTan0002476
SyntenyTan0002476
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACCAAGAGGGACTAATCGAGGATTGGAGTAAGCTGAACTTGACTACAGAGGATGAGGAAGTCTCAGTTGATGTAAGAGTGGGAACTGATCAGTCTACCGAATTGTTATTTGAAGGATGTATGGTCGGGAAGCTTCTTTCTTCAAGAGTTGTTTCAGCTGAGGTAATTCGAAAAACCTTTAAAACAACTTGGAAAATAGATAATGGGTTAGAGGTTGAAGTTATTGGGAAAAATCAATTCATCTTTAGGTTTCCAAGCGAAATAGATCGATTTCTAGTTGTACGTAATGGCCCTTGGTTGTTTGATCGCTTCCTACTCGTCTTTGAAAAACCACAACCGTTTGTAAAACCCTCTCAGATGCAGTTTAATTTTGTTGCGTTTTGGGTCCATTTTCTTGATATCCCATTAACCTGCTTTAACAAAGAGATGGCAGAGAGGCTGGGGAATGCAATGGGTGTGTTTGAAGAGTTCGATGACAAAGAGGGAACTTTATGCTGGGGGGCGAGTATGAGAGTTAAAATCCGTATAAATATCAGGAAACCATTGAGAAGAGGAATTAAGTTGAACTTAGAGGGACCTATGGGAGGAGTTCTTATCCCAATTAAGTATGAAAAACTACCACATTTTTGCTCCCATTGTGGCATCATAGGTCACCACTTTAAGGATTGCAATTTCTTCTACAAAAATGCCGACCCAAAATTGAACTTCCATCAGTATGGTCAAGGTCTAAGGTATAATGGGAGATTCACGTCGGTTGCCCGATCCCCTACGAATAATTCCGACTTCCGCATAAATGGAGACAAAGCAGAAACAAACTTAGGAAGGGAAAGAGTGAGCCCGACGAATGGTCCTCCATCTGGAACTCACAAGCAGAGGCAGAATATGGGAAGCAAGGAGAAGATCGGTGTACCTGGTTCGAACGATCAGATGGATGTTGGCGAGTCACTGGCGTCTGACCGTTTCCCATCGCCGATCAGCATTGATGGCATCATTAATTCATCTGCTAATATTTCGGAGTGCTCATTGATGGAGCAATCTCCGGAATTAATGTCGCCCGCCATCTCCGGAGGAATTGTAGCAGCAGAGGAACAAAAGAGAAACGGCTGTGCAAGGAAGCTAGATTTTGGGAATGAGGGAGGAAACGTTTCGGGGAGGAAATCTAACCCTGATTTTAAAAAAGTGAATGGGCCTGAGATGGTGGACCTGGCGGTTGAGGAGGTTTCCATGAAAGGCAAGGGACTGGCAGATATGGGCCAGGTATTCAAATCCCTTGGGCCTCTGCCGGATGGTGCATTGCCATCAACTGAGGAAAATTCGAACCTGCTGCACGATCAACCCAACAAGTCTGCAAATCTAGTAATACAACCGAATGATTCAAAGGTGAATGGTAGCAATTTCCTCACTCCTGCTAACAATAAAATTCACAGCCCCTTTTATAATGACTTCAGGGGAAATGAAAGAAAGTGGAAGCGAATGGCTCGAGATTCTCCGAAGACCTGGCAGAATGATGGGCAGATGGAAATGGCGGGGAAGCGCAAGGGGCAAGATAAAGAAGACATGGTTGGGCCGAAGAAGCCAAAATTGGTGGACCCTAAGGTGACGACTCACAATGAACAAGCAATATCGGTGGAGGCTGCAGGTCAGCCCCGCCGGGCACAATGAGAATAATTTGTTGGAATGTCCATGGTTTGGGGAGTACACGGGCATTCCGTGACGTTCACGAAAACTTACAAATTTTAAACCCCGATTTATGTTTTTTGTTGGAAACTAAGTGTAATCCCTTTATTTTGAATAAGTTAAAGAACTGCTTACATTATGTTGGTTGTTTTGTAGTAGAACGTACTGGCCTAGGGGGTGGGTTATGTCTCCTTTGGCGCGAAAATATGGTTGTTTCAATTCGTTCCTATTCACAATCTCATATTGACGCGGGGATCAAATGGCAAAATAAGTGGTGGAGGTTCACAGGGATATATGGCCAACCTGAGCATACCTTGAGGTGGAAAACCTGGGAATTATTGCGAATATTAAGGGGTCATCATAATGAACCGTGGGTGGTGGGAGGTGATTTGAACGAAATCCTATGGGATTTTGAGAAGAGAGGAGGGAGGGATAGAGAAAGAGGATTGATATATAACTTCAGATCAATGTTAGATGATTGCAATTTACAGGATTTGGGGTTTGAGGGTGATGCCTACACCTGGTGCAACTGA

mRNA sequence

ATGGACCAAGAGGGACTAATCGAGGATTGGAGTAAGCTGAACTTGACTACAGAGGATGAGGAAGTCTCAGTTGATGTAAGAGTGGGAACTGATCAGTCTACCGAATTGTTATTTGAAGGATGTATGGTCGGGAAGCTTCTTTCTTCAAGAGTTGTTTCAGCTGAGGTAATTCGAAAAACCTTTAAAACAACTTGGAAAATAGATAATGGGTTAGAGGTTGAAGTTATTGGGAAAAATCAATTCATCTTTAGGTTTCCAAGCGAAATAGATCGATTTCTAGTTGTACGTAATGGCCCTTGGTTGTTTGATCGCTTCCTACTCGTCTTTGAAAAACCACAACCGTTTGTAAAACCCTCTCAGATGCAGTTTAATTTTGTTGCGTTTTGGGTCCATTTTCTTGATATCCCATTAACCTGCTTTAACAAAGAGATGGCAGAGAGGCTGGGGAATGCAATGGGTGTGTTTGAAGAGTTCGATGACAAAGAGGGAACTTTATGCTGGGGGGCGAGTATGAGAGTTAAAATCCGTATAAATATCAGGAAACCATTGAGAAGAGGAATTAAGTTGAACTTAGAGGGACCTATGGGAGGAGTTCTTATCCCAATTAAGTATGAAAAACTACCACATTTTTGCTCCCATTGTGGCATCATAGGTCACCACTTTAAGGATTGCAATTTCTTCTACAAAAATGCCGACCCAAAATTGAACTTCCATCAGTATGGTCAAGGTCTAAGGTATAATGGGAGATTCACGTCGGTTGCCCGATCCCCTACGAATAATTCCGACTTCCGCATAAATGGAGACAAAGCAGAAACAAACTTAGGAAGGGAAAGAGTGAGCCCGACGAATGGTCCTCCATCTGGAACTCACAAGCAGAGGCAGAATATGGGAAGCAAGGAGAAGATCGGTGTACCTGGTTCGAACGATCAGATGGATGTTGGCGAGTCACTGGCGTCTGACCGTTTCCCATCGCCGATCAGCATTGATGGCATCATTAATTCATCTGCTAATATTTCGGAGTGCTCATTGATGGAGCAATCTCCGGAATTAATGTCGCCCGCCATCTCCGGAGGAATTGTAGCAGCAGAGGAACAAAAGAGAAACGGCTGTGCAAGGAAGCTAGATTTTGGGAATGAGGGAGGAAACGTTTCGGGGAGGAAATCTAACCCTGATTTTAAAAAAGTGAATGGGCCTGAGATGGTGGACCTGGCGGTTGAGGAGGTTTCCATGAAAGGCAAGGGACTGGCAGATATGGGCCAGGTATTCAAATCCCTTGGGCCTCTGCCGGATGGTGCATTGCCATCAACTGAGGAAAATTCGAACCTGCTGCACGATCAACCCAACAAGTCTGCAAATCTAGTAATACAACCGAATGATTCAAAGGTGAATGGTAGCAATTTCCTCACTCCTGCTAACAATAAAATTCACAGCCCCTTTTATAATGACTTCAGGGGAAATGAAAGAAAGTGGAAGCGAATGGCTCGAGATTCTCCGAAGACCTGGCAGAATGATGGGCAGATGGAAATGGCGGGGAAGCGCAAGGGGCAAGATAAAGAAGACATGGTTGGGCCGAAGAAGCCAAAATTGGTGGACCCTAAGGATTTGGGGTTTGAGGGTGATGCCTACACCTGGTGCAACTGA

Coding sequence (CDS)

ATGGACCAAGAGGGACTAATCGAGGATTGGAGTAAGCTGAACTTGACTACAGAGGATGAGGAAGTCTCAGTTGATGTAAGAGTGGGAACTGATCAGTCTACCGAATTGTTATTTGAAGGATGTATGGTCGGGAAGCTTCTTTCTTCAAGAGTTGTTTCAGCTGAGGTAATTCGAAAAACCTTTAAAACAACTTGGAAAATAGATAATGGGTTAGAGGTTGAAGTTATTGGGAAAAATCAATTCATCTTTAGGTTTCCAAGCGAAATAGATCGATTTCTAGTTGTACGTAATGGCCCTTGGTTGTTTGATCGCTTCCTACTCGTCTTTGAAAAACCACAACCGTTTGTAAAACCCTCTCAGATGCAGTTTAATTTTGTTGCGTTTTGGGTCCATTTTCTTGATATCCCATTAACCTGCTTTAACAAAGAGATGGCAGAGAGGCTGGGGAATGCAATGGGTGTGTTTGAAGAGTTCGATGACAAAGAGGGAACTTTATGCTGGGGGGCGAGTATGAGAGTTAAAATCCGTATAAATATCAGGAAACCATTGAGAAGAGGAATTAAGTTGAACTTAGAGGGACCTATGGGAGGAGTTCTTATCCCAATTAAGTATGAAAAACTACCACATTTTTGCTCCCATTGTGGCATCATAGGTCACCACTTTAAGGATTGCAATTTCTTCTACAAAAATGCCGACCCAAAATTGAACTTCCATCAGTATGGTCAAGGTCTAAGGTATAATGGGAGATTCACGTCGGTTGCCCGATCCCCTACGAATAATTCCGACTTCCGCATAAATGGAGACAAAGCAGAAACAAACTTAGGAAGGGAAAGAGTGAGCCCGACGAATGGTCCTCCATCTGGAACTCACAAGCAGAGGCAGAATATGGGAAGCAAGGAGAAGATCGGTGTACCTGGTTCGAACGATCAGATGGATGTTGGCGAGTCACTGGCGTCTGACCGTTTCCCATCGCCGATCAGCATTGATGGCATCATTAATTCATCTGCTAATATTTCGGAGTGCTCATTGATGGAGCAATCTCCGGAATTAATGTCGCCCGCCATCTCCGGAGGAATTGTAGCAGCAGAGGAACAAAAGAGAAACGGCTGTGCAAGGAAGCTAGATTTTGGGAATGAGGGAGGAAACGTTTCGGGGAGGAAATCTAACCCTGATTTTAAAAAAGTGAATGGGCCTGAGATGGTGGACCTGGCGGTTGAGGAGGTTTCCATGAAAGGCAAGGGACTGGCAGATATGGGCCAGGTATTCAAATCCCTTGGGCCTCTGCCGGATGGTGCATTGCCATCAACTGAGGAAAATTCGAACCTGCTGCACGATCAACCCAACAAGTCTGCAAATCTAGTAATACAACCGAATGATTCAAAGGTGAATGGTAGCAATTTCCTCACTCCTGCTAACAATAAAATTCACAGCCCCTTTTATAATGACTTCAGGGGAAATGAAAGAAAGTGGAAGCGAATGGCTCGAGATTCTCCGAAGACCTGGCAGAATGATGGGCAGATGGAAATGGCGGGGAAGCGCAAGGGGCAAGATAAAGAAGACATGGTTGGGCCGAAGAAGCCAAAATTGGTGGACCCTAAGGATTTGGGGTTTGAGGGTGATGCCTACACCTGGTGCAACTGA

Protein sequence

MDQEGLIEDWSKLNLTTEDEEVSVDVRVGTDQSTELLFEGCMVGKLLSSRVVSAEVIRKTFKTTWKIDNGLEVEVIGKNQFIFRFPSEIDRFLVVRNGPWLFDRFLLVFEKPQPFVKPSQMQFNFVAFWVHFLDIPLTCFNKEMAERLGNAMGVFEEFDDKEGTLCWGASMRVKIRINIRKPLRRGIKLNLEGPMGGVLIPIKYEKLPHFCSHCGIIGHHFKDCNFFYKNADPKLNFHQYGQGLRYNGRFTSVARSPTNNSDFRINGDKAETNLGRERVSPTNGPPSGTHKQRQNMGSKEKIGVPGSNDQMDVGESLASDRFPSPISIDGIINSSANISECSLMEQSPELMSPAISGGIVAAEEQKRNGCARKLDFGNEGGNVSGRKSNPDFKKVNGPEMVDLAVEEVSMKGKGLADMGQVFKSLGPLPDGALPSTEENSNLLHDQPNKSANLVIQPNDSKVNGSNFLTPANNKIHSPFYNDFRGNERKWKRMARDSPKTWQNDGQMEMAGKRKGQDKEDMVGPKKPKLVDPKDLGFEGDAYTWCN
Homology
BLAST of Tan0002476 vs. NCBI nr
Match: XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia])

HSP 1 Score: 243.8 bits (621), Expect = 3.4e-60
Identity = 139/350 (39.71%), Postives = 198/350 (56.57%), Query Frame = 0

Query: 1   MDQEGLIEDWSKLNLTTEDEEVSVDVRVGTDQSTELLFEGCMVGKLLSSRVVSAEVIRKT 60
           MD E L+ DW K  LT+E++E+++DV V   +  E      +VGKLL+ R++SA+V+ + 
Sbjct: 1   MDHENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRV 60

Query: 61  FKTTWKIDNGLEVEVIGKNQFIFRFPSEIDRFLVVRNGPWLFDRFLLVFEKPQPFVKPSQ 120
               WK+++ L VE IGKN F+F F  E D   V++ GPW FD+ L+V +KP      S+
Sbjct: 61  LLLAWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISE 120

Query: 121 MQFNFVAFWVHFLDIPLTCFNKEMAERLGNAMGVFEEFDDKEGTLCWGASMRVKIRINIR 180
           ++FN VAFW+H  D+P++  NK MA RLGNA+G F + D  E    WGAS+R+++ I+I 
Sbjct: 121 LEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDIT 180

Query: 181 KPLRRGIKLNLEGPMGGVLIPIKYEKLPHFCSHCGIIGHHFKDCNFFYKNA-DPKLNFHQ 240
           KPLRRGIK+N++GPMGG  IPI+YE+LP FC  CG+IGH   DC+  Y  A D      +
Sbjct: 181 KPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATSE 240

Query: 241 YGQGLRYNGRFTSVARSPTNNSDFRINGDKAETNLGRERVSPTNGPPSGTHKQRQNMGSK 300
           YG  LR+                    G KA    GR+  SP      G+     +M SK
Sbjct: 241 YGPWLRF-------------------VGSKAGAQKGRKGKSPAREDSCGS----SSMNSK 300

Query: 301 EKIGVPGSNDQMDVGESLASDRFPSPISID--GIINSSANISECSLMEQS 348
           E+ GV  +  Q+   E    D F S  + +  G     A+ + C+L  +S
Sbjct: 301 ER-GVEETKQQL--SEQTNQDGFQSQAAAEQTGDAGGRASATGCALGMES 324

BLAST of Tan0002476 vs. NCBI nr
Match: XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia])

HSP 1 Score: 229.2 bits (583), Expect = 8.7e-56
Identity = 110/253 (43.48%), Postives = 154/253 (60.87%), Query Frame = 0

Query: 1   MDQEGLIEDWSKLNLTTEDEEVSVDVRVGTDQSTELLFEGCMVGKLLSSRVVSAEVIRKT 60
           M    L+E+W    LT+E+++++VD+     + T    E  ++ KLLS R +S  V++ T
Sbjct: 1   MAASNLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNT 60

Query: 61  FKTTWKID-NGLEVEVIGKNQFIFRFPSEIDRFLVVRNGPWLFDRFLLVFEKPQPFVKPS 120
            K  WK+D     V++IG N F+F F    DR  ++R GPW FDR L++ + P    KP 
Sbjct: 61  LKIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPL 120

Query: 121 QMQFNFVAFWVHFLDIPLTCFNKEMAERLGNAMGVFEEFDDKEGTLCWGASMRVKIRINI 180
            M F  V+ WVHF D+ L C NK MA RLGNA+G+FE+ +      CWG+ +RV++R ++
Sbjct: 121 DMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDV 180

Query: 181 RKPLRRGIKLNLEGPMGGVLIPIKYEKLPHFCSHCGIIGHHFKDCNFFYKNADPKLNFHQ 240
            KPL RGIKLNL+GPMGG  IPI+YE+LP F  HCG + H  KDC+    ++  K N  Q
Sbjct: 181 MKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCCVDSVSK-NL-Q 240

Query: 241 YGQGLRYNGRFTS 253
           YG  LR+ G   S
Sbjct: 241 YGPWLRFQGHKNS 251

BLAST of Tan0002476 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])

HSP 1 Score: 216.9 bits (551), Expect = 4.5e-52
Identity = 127/354 (35.88%), Postives = 184/354 (51.98%), Query Frame = 0

Query: 6   LIEDWSKLNLTTEDEEVSVDVRVGTDQSTELLFEGCMVGKLLSSRVVSAEVIRKTFKTTW 65
           L+E+W    LT+E+EE ++DV      +T    E  +VGKL   R ++  V++ T +T W
Sbjct: 6   LLEEWKNFKLTSEEEETAIDVDASAPATTGSRLEQILVGKLFIKRPITCPVMKNTMRTAW 65

Query: 66  KID-NGLEVEVIGKNQFIFRFPSEIDRFLVVRNGPWLFDRFLLVFEKPQPFVKPSQMQFN 125
           K++ N  EV+ +G N F+F F   +DR  + ++GPW FDR L++  KP   + PS++ F 
Sbjct: 66  KLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPWTFDRTLVLINKPVALIPPSELDFT 125

Query: 126 FVAFWVHFLDIPLTCFNKEMAERLGNAMGVFEEFDDKEGTLCWGASMRVKIRINIRKPLR 185
            +  WV F D+PL C  ++MA RLGNA+G FEE D  +    WG+++RV++ ++I KPLR
Sbjct: 126 KLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADCDDLNPDWGSNLRVRVMLDISKPLR 185

Query: 186 RGIKLNLEGPMGGVLIPIKYEKLPHFCSHCGIIGHHFKDCNFFYKNADPKLNFHQYGQGL 245
           RGIKLNL+GP+GG  IPI+YE+LP FC HCG+     K               HQYG  L
Sbjct: 186 RGIKLNLDGPIGGAWIPIQYERLPDFCYHCGLSSSRKK---------------HQYGSWL 245

Query: 246 RYNGRFTSVARSPTNNSDFRINGDKAETNLGRERVSPTNGPPSGTHKQRQNMGSKEKIGV 305
           RY G  T     P          DK+  N      SP      G     Q+  +   I +
Sbjct: 246 RYQG--TVKPTMPQMKQPQEDLLDKSGNNSFSSSTSPVGAGSQGV----QSAPATGPIAI 305

Query: 306 PGSNDQMDVGESLA--SDRFPSPISIDGIINSSANISECSLMEQSPELMSPAIS 357
           P  +   +  +  A  S +  SP+ ID        I+   +   +P L S A S
Sbjct: 306 PMESPVTETPKKGAEPSQQGKSPVLID---EGEQRINVKEISNLNPPLKSGAPS 335

BLAST of Tan0002476 vs. NCBI nr
Match: XP_028124075.1 (uncharacterized protein LOC114321128 [Camellia sinensis])

HSP 1 Score: 187.2 bits (474), Expect = 3.8e-43
Identity = 96/246 (39.02%), Postives = 153/246 (62.20%), Query Frame = 0

Query: 4   EGLIEDWSKLNLTTEDEEVSVDVRVGTDQSTELLF---EGCMVGKLLSSRVVSAEVIRKT 63
           + L++    L+LT+E++ V   VR+G D ST L+    + C+VGKLL+ R  + E ++ T
Sbjct: 3   DSLVDLTRTLSLTSEEDAV---VRIGGD-STSLMMGKSDMCLVGKLLTRRPFNVEAMKNT 62

Query: 64  FKTTWKIDNGLEVEVIGKNQFIFRFPSEIDRFLVVRNGPWLFDRFLLVFEKPQPFVKPSQ 123
             + W+   G++V VIG N F+F F   +D+  V+ NGPW FD+ LL+  +  P V+PS 
Sbjct: 63  LLSVWQPTKGMQVRVIGDNLFVFVFGHVVDKRRVLSNGPWTFDKHLLMLGEMDPNVQPSD 122

Query: 124 MQFNFVAFWVHFLDIPLTCFNKEMAERLGNAMGVFEEFDDKEGTLCWGASMRVKIRINIR 183
           +Q   V FWVH  ++PL   NK++ + +GNA+G F + D ++G + WG +MR+++ I++R
Sbjct: 123 IQLTGVQFWVHVCNLPLVLMNKQVGQIVGNAVGQFIDMDYEDGGIAWGRTMRIRVAIDVR 182

Query: 184 KPLRRGIKLNLEGPMGGVLIPIKYEKLPHFCSHCGIIGHHFKDCNFFYKNAD-PKLNFHQ 243
           KPLRRG+KL L      + +  KYE+LP +C  CG +GH  ++C+     AD  +++  Q
Sbjct: 183 KPLRRGMKLALSS-ADPIWVDFKYERLPIYCYFCGRLGHSDRECDDKLSFADGTRVDSLQ 242

Query: 244 YGQGLR 246
           YG  LR
Sbjct: 243 YGAWLR 243

BLAST of Tan0002476 vs. NCBI nr
Match: XP_028122006.1 (uncharacterized protein LOC114319195 [Camellia sinensis])

HSP 1 Score: 184.5 bits (467), Expect = 2.5e-42
Identity = 94/246 (38.21%), Postives = 154/246 (62.60%), Query Frame = 0

Query: 4   EGLIEDWSKLNLTTEDEEVSVDVRVGTDQSTELLF---EGCMVGKLLSSRVVSAEVIRKT 63
           + L++    L+LT+E++ V   VR+G  +ST L+    + C+VGKLL+ R  + E ++ T
Sbjct: 3   DSLLDLTRTLSLTSEEDAV---VRIG-GESTSLMMGKSDMCLVGKLLTRRPFNVEAMKNT 62

Query: 64  FKTTWKIDNGLEVEVIGKNQFIFRFPSEIDRFLVVRNGPWLFDRFLLVFEKPQPFVKPSQ 123
             + W+   G++V VIG N F+F F   +D+  V+ +GPW FD+ LL+  +  P V+PS 
Sbjct: 63  LLSVWQPTKGMQVRVIGDNLFVFVFGHVVDKRRVLSDGPWTFDKHLLMLGEMDPNVQPSD 122

Query: 124 MQFNFVAFWVHFLDIPLTCFNKEMAERLGNAMGVFEEFDDKEGTLCWGASMRVKIRINIR 183
           +Q   V FWVH  ++PL   NK++ E +GNA+G F + D ++G + WG +MR+++ +++R
Sbjct: 123 IQLTRVQFWVHVCNLPLVLMNKKVGEIVGNAVGQFIDMDYEDGGIVWGRTMRIRVALDVR 182

Query: 184 KPLRRGIKLNLEGPMGGVLIPIKYEKLPHFCSHCGIIGHHFKDCNFFYKNAD-PKLNFHQ 243
           KPLRRG+KL L      + +  KYE+LP +C  CG +GH  ++C+    +AD  +++  Q
Sbjct: 183 KPLRRGMKLALSS-AEPIWVDFKYERLPIYCYFCGRLGHSERECDDKLSSADGSRVDSLQ 242

Query: 244 YGQGLR 246
           YG  LR
Sbjct: 243 YGAWLR 243

BLAST of Tan0002476 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 1.7e-60
Identity = 139/350 (39.71%), Postives = 198/350 (56.57%), Query Frame = 0

Query: 1   MDQEGLIEDWSKLNLTTEDEEVSVDVRVGTDQSTELLFEGCMVGKLLSSRVVSAEVIRKT 60
           MD E L+ DW K  LT+E++E+++DV V   +  E      +VGKLL+ R++SA+V+ + 
Sbjct: 1   MDHENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRV 60

Query: 61  FKTTWKIDNGLEVEVIGKNQFIFRFPSEIDRFLVVRNGPWLFDRFLLVFEKPQPFVKPSQ 120
               WK+++ L VE IGKN F+F F  E D   V++ GPW FD+ L+V +KP      S+
Sbjct: 61  LLLAWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISE 120

Query: 121 MQFNFVAFWVHFLDIPLTCFNKEMAERLGNAMGVFEEFDDKEGTLCWGASMRVKIRINIR 180
           ++FN VAFW+H  D+P++  NK MA RLGNA+G F + D  E    WGAS+R+++ I+I 
Sbjct: 121 LEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDIT 180

Query: 181 KPLRRGIKLNLEGPMGGVLIPIKYEKLPHFCSHCGIIGHHFKDCNFFYKNA-DPKLNFHQ 240
           KPLRRGIK+N++GPMGG  IPI+YE+LP FC  CG+IGH   DC+  Y  A D      +
Sbjct: 181 KPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATSE 240

Query: 241 YGQGLRYNGRFTSVARSPTNNSDFRINGDKAETNLGRERVSPTNGPPSGTHKQRQNMGSK 300
           YG  LR+                    G KA    GR+  SP      G+     +M SK
Sbjct: 241 YGPWLRF-------------------VGSKAGAQKGRKGKSPAREDSCGS----SSMNSK 300

Query: 301 EKIGVPGSNDQMDVGESLASDRFPSPISID--GIINSSANISECSLMEQS 348
           E+ GV  +  Q+   E    D F S  + +  G     A+ + C+L  +S
Sbjct: 301 ER-GVEETKQQL--SEQTNQDGFQSQAAAEQTGDAGGRASATGCALGMES 324

BLAST of Tan0002476 vs. ExPASy TrEMBL
Match: A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 4.2e-56
Identity = 110/253 (43.48%), Postives = 154/253 (60.87%), Query Frame = 0

Query: 1   MDQEGLIEDWSKLNLTTEDEEVSVDVRVGTDQSTELLFEGCMVGKLLSSRVVSAEVIRKT 60
           M    L+E+W    LT+E+++++VD+     + T    E  ++ KLLS R +S  V++ T
Sbjct: 1   MAASNLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNT 60

Query: 61  FKTTWKID-NGLEVEVIGKNQFIFRFPSEIDRFLVVRNGPWLFDRFLLVFEKPQPFVKPS 120
            K  WK+D     V++IG N F+F F    DR  ++R GPW FDR L++ + P    KP 
Sbjct: 61  LKIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPL 120

Query: 121 QMQFNFVAFWVHFLDIPLTCFNKEMAERLGNAMGVFEEFDDKEGTLCWGASMRVKIRINI 180
            M F  V+ WVHF D+ L C NK MA RLGNA+G+FE+ +      CWG+ +RV++R ++
Sbjct: 121 DMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDV 180

Query: 181 RKPLRRGIKLNLEGPMGGVLIPIKYEKLPHFCSHCGIIGHHFKDCNFFYKNADPKLNFHQ 240
            KPL RGIKLNL+GPMGG  IPI+YE+LP F  HCG + H  KDC+    ++  K N  Q
Sbjct: 181 MKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCCVDSVSK-NL-Q 240

Query: 241 YGQGLRYNGRFTS 253
           YG  LR+ G   S
Sbjct: 241 YGPWLRFQGHKNS 251

BLAST of Tan0002476 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 2.2e-52
Identity = 127/354 (35.88%), Postives = 184/354 (51.98%), Query Frame = 0

Query: 6   LIEDWSKLNLTTEDEEVSVDVRVGTDQSTELLFEGCMVGKLLSSRVVSAEVIRKTFKTTW 65
           L+E+W    LT+E+EE ++DV      +T    E  +VGKL   R ++  V++ T +T W
Sbjct: 6   LLEEWKNFKLTSEEEETAIDVDASAPATTGSRLEQILVGKLFIKRPITCPVMKNTMRTAW 65

Query: 66  KID-NGLEVEVIGKNQFIFRFPSEIDRFLVVRNGPWLFDRFLLVFEKPQPFVKPSQMQFN 125
           K++ N  EV+ +G N F+F F   +DR  + ++GPW FDR L++  KP   + PS++ F 
Sbjct: 66  KLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPWTFDRTLVLINKPVALIPPSELDFT 125

Query: 126 FVAFWVHFLDIPLTCFNKEMAERLGNAMGVFEEFDDKEGTLCWGASMRVKIRINIRKPLR 185
            +  WV F D+PL C  ++MA RLGNA+G FEE D  +    WG+++RV++ ++I KPLR
Sbjct: 126 KLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADCDDLNPDWGSNLRVRVMLDISKPLR 185

Query: 186 RGIKLNLEGPMGGVLIPIKYEKLPHFCSHCGIIGHHFKDCNFFYKNADPKLNFHQYGQGL 245
           RGIKLNL+GP+GG  IPI+YE+LP FC HCG+     K               HQYG  L
Sbjct: 186 RGIKLNLDGPIGGAWIPIQYERLPDFCYHCGLSSSRKK---------------HQYGSWL 245

Query: 246 RYNGRFTSVARSPTNNSDFRINGDKAETNLGRERVSPTNGPPSGTHKQRQNMGSKEKIGV 305
           RY G  T     P          DK+  N      SP      G     Q+  +   I +
Sbjct: 246 RYQG--TVKPTMPQMKQPQEDLLDKSGNNSFSSSTSPVGAGSQGV----QSAPATGPIAI 305

Query: 306 PGSNDQMDVGESLA--SDRFPSPISIDGIINSSANISECSLMEQSPELMSPAIS 357
           P  +   +  +  A  S +  SP+ ID        I+   +   +P L S A S
Sbjct: 306 PMESPVTETPKKGAEPSQQGKSPVLID---EGEQRINVKEISNLNPPLKSGAPS 335

BLAST of Tan0002476 vs. ExPASy TrEMBL
Match: A0A5C7ICE5 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_008162 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.7e-36
Identity = 98/307 (31.92%), Postives = 157/307 (51.14%), Query Frame = 0

Query: 1   MDQEGLIEDWSKLNLTTEDEEVSVDVRVGTDQSTELLFEGCMVGKLLSSRVVSAEVIRKT 60
           MDQE +    + L+L  +DE +   VR     S     + C+VGK+L+++ V+ E  R  
Sbjct: 1   MDQEEIARLCASLSLQNKDETL-WSVRETLKDSAGRKLDLCLVGKVLTNKHVNREAFRTV 60

Query: 61  FKTTWKIDNGLEVEVIGKNQFIFRFPSEIDRFLVVRNGPWLFDRFLLVFEKPQPFVKPSQ 120
               W+    L+VEV+  N F+F F ++ DRF ++  GPW FD  LLV EKP        
Sbjct: 61  MPKIWQ--TTLDVEVVQDNTFLFYFRNQGDRFWILSGGPWTFDNCLLVLEKPSGVRDIIS 120

Query: 121 MQFNFVAFWVHFLDIPLTCFNKEMAERLGNAMGVFEEFDDKEGTLCWGASMRVKIRINIR 180
           + FN VAFW+   + PL C  KEM E +G+ +G   + D      C+G  MR+K+ +++ 
Sbjct: 121 LAFNRVAFWLQIPNAPLLCMTKEMGEFIGHLIGELRDIDVGITGECFGKYMRLKVAVDVS 180

Query: 181 KPLRRGIKLNLEGPMGGVLIPIKYEKLPHFCSHCGIIGHHFKDCNFFYKNADPKLNFHQY 240
           KPL+R ++L LE     +L+ ++YEKLP +C HCGIIGH ++DC              +Y
Sbjct: 181 KPLKRFLRLELEKGKESILL-LRYEKLPEYCFHCGIIGHSYQDCGQRRGEDIGGSKDFEY 240

Query: 241 GQGLRYNGRFTSVARSPTNNS---DFRINGDKAETNLGRERVSPTNGPPSGTHKQRQNMG 300
           G  +R        +  P  N+    +R+ G+ +++  G  R        +G H +++   
Sbjct: 241 GPWMR-------ASDPPGRNNVTGSYRLRGEGSKSGFGGARFH------NGGHSRKEESW 290

Query: 301 SKEKIGV 305
              ++ V
Sbjct: 301 RSRRVSV 290

BLAST of Tan0002476 vs. ExPASy TrEMBL
Match: A0A5C7IHI0 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_003470 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 6.3e-36
Identity = 84/212 (39.62%), Postives = 120/212 (56.60%), Query Frame = 0

Query: 14  NLTTEDEEVSV-DVRVGTDQSTELLFEGCMVGKLLSSRVVSAEVIRKTFKTTWKIDNGLE 73
           NL+ +DE+  V  V  G D+      + C+VGK+LS + V+ E  +   +  W     +E
Sbjct: 12  NLSIKDEDNEVRQVSEGIDRDGVEDVDHCLVGKVLSGKRVNREAFKTVIEQLWSPFGNVE 71

Query: 74  VEVIGKNQFIFRFPSEIDRFLVVRNGPWLFDRFLLVFEKPQPFVKPSQMQFNFVAFWVHF 133
           +EV+G N F+F F +  DR  + + GPW FDR L+V EKP+     SQ+ FN   FWV  
Sbjct: 72  IEVVGDNTFMFYFNNPEDRDRIWQRGPWHFDRSLIVLEKPEGMGDISQLCFNKAEFWVQI 131

Query: 134 LDIPLTCFNKEMAERLGNAMGVFEEFDDKEGTLCWGASMRVKIRINIRKPLRRGIKLNLE 193
            DIP+ C NK MA+ L   +G   E    E   CWG  +RVK+ I+I KPL+R ++L L+
Sbjct: 132 HDIPIMCMNKRMAKWLAEQIGRVVEI-PMESRECWGKFLRVKVLIDISKPLKRWLRLKLD 191

Query: 194 GPMGGVLIPIKYEKLPHFCSHCGIIGHHFKDC 225
                V++ +KYE+LP FC  CG +GH    C
Sbjct: 192 RSDNIVVVGLKYERLPEFCYACGKVGHGINKC 222

BLAST of Tan0002476 vs. TAIR 10
Match: AT5G36228.1 (nucleic acid binding;zinc ion binding )

HSP 1 Score: 82.4 bits (202), Expect = 1.2e-15
Identity = 46/185 (24.86%), Postives = 85/185 (45.95%), Query Frame = 0

Query: 42  MVGKLLSSRVVSAEVIRKTFKTTWKIDNGLEVEVIGKNQFIFRFPSEIDRFLVVRNGPWL 101
           ++G++L+ +  S E         W +   +   ++    F  RF SEID    +R  PW+
Sbjct: 39  LLGRILNPQTQSVERAILELPYQWGLGTQVHGRILDDRCFQVRFRSEIDLLNGLRRAPWV 98

Query: 102 FDRFLLVFEKPQPFVKPSQMQFNFVAFWVHFLDIPLTCFNKEMAERLGNAMGVFEEFDDK 161
           F+ + +  ++ + F  P++    F+  WVH   IPL   ++   E + + +G     D  
Sbjct: 99  FNEWFIALQRWEDF--PTEDFLTFIDVWVHIRGIPLPYVSERTVEIIASTLGEVVAMDFN 158

Query: 162 EGTLCWGASMRVKIRINIRKPLRRGIKLNLEGPMGGVLIPIKYEKLPHFCSHCGIIGHHF 221
           E T      +RVK+R++  +PLR   ++         +I  +YEKL   C++C  + H  
Sbjct: 159 EETTSQITFIRVKVRMDFTEPLRFFRRVRF-ASRERAMIGFEYEKLQRVCTNCCRVNHQV 218

Query: 222 KDCNF 227
             C +
Sbjct: 219 SHCPY 220

BLAST of Tan0002476 vs. TAIR 10
Match: AT2G17920.1 (nucleic acid binding;zinc ion binding )

HSP 1 Score: 74.3 bits (181), Expect = 3.3e-13
Identity = 47/185 (25.41%), Postives = 80/185 (43.24%), Query Frame = 0

Query: 42  MVGKLLSSRVVSAEVIRKTFKTTWKIDNGLEVEVIGKNQFIFRFPSEIDRFLVVRNGPWL 101
           ++ + L+ RV + + I       W +   +   +I      F F SE+D   V R  PWL
Sbjct: 39  IIARPLNPRVQNLQAIITALPRAWGLTAHVHGRIIDDTYVQFLFQSEMDLLSVQRREPWL 98

Query: 102 FDRFLLVFEKPQPFVKPSQMQFNFVAFWVHFLDIPLTCFNKEMAERLGNAMGVFEEFDDK 161
           F+ + +  ++ QP   P+      +  WV    IP    ++E A  +   +G     D  
Sbjct: 99  FNNWFVASQRWQP--APALNFVTTIDLWVQMRGIPFLYVSEETALEIAQEIGAIISLDFH 158

Query: 162 EGTLCWGASMRVKIRINIRKPLRRGIKLNLEGPMGGVLIPIKYEKLPHFCSHCGIIGHHF 221
           + T    A +RV++R+ I   LR   ++  E      LI  +YE+L   CS+C    H+ 
Sbjct: 159 DTTSTQIAYIRVRVRVGITDSLRFFQRITFESG-ESALIRFQYERLRRICSNCFRFTHNR 218

Query: 222 KDCNF 227
             C +
Sbjct: 219 NYCPY 220

BLAST of Tan0002476 vs. TAIR 10
Match: AT3G31430.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18636.1); Has 295 Blast hits to 291 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 295; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 73.6 bits (179), Expect = 5.7e-13
Identity = 47/184 (25.54%), Postives = 82/184 (44.57%), Query Frame = 0

Query: 42  MVGKLLSSRVVSAEVIRKTFKTTWKIDNGLEVEVIGKNQFIFRFPSEIDRFLVVRNGPWL 101
           + G+ +  R  +   I  +    W     +   ++   QF F F  E     V+R GPW 
Sbjct: 134 LFGRPVMPRRQNLRSIVASMPRIWGQSGLVHGRIMEGRQFHFIFTLEESLETVLRRGPWA 193

Query: 102 FDRFLLVFEKPQPFVKPSQMQFNFVAFWVHFLDIPLTCFNKEMAERLGNAMGVFEEFDDK 161
           F+ ++++ ++ +P +      F F+ FWV    IP    N+ + E +G A+G   + D  
Sbjct: 194 FNDWMILLQRWEPQIP----LFPFIPFWVQIRGIPFQFLNRGVVEHIGRALGQVLDTDFN 253

Query: 162 EGTLCWGASMRVKIRINIRKPLRRGIKLNLEGPMG-GVLIPIKYEKLPHFCSHCGIIGHH 221
              +      RV +  +I  PLR   + + +   G   L+  +YE+L  FC  CG++ H 
Sbjct: 254 VEVVARMDFARVLLHWDITHPLR--FQRHFQFTAGVNTLLRFRYERLRGFCEVCGMLTHD 311

Query: 222 FKDC 225
           F  C
Sbjct: 314 FGAC 311

BLAST of Tan0002476 vs. TAIR 10
Match: AT2G13450.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02000.1); Has 247 Blast hits to 243 proteins in 13 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 2; Plants - 243; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 72.0 bits (175), Expect = 1.7e-12
Identity = 46/183 (25.14%), Postives = 79/183 (43.17%), Query Frame = 0

Query: 42  MVGKLLSSRVVSAEVIRKTFKTTWKIDNGLEVEVIGKNQFIFRFPSEIDRFLVVRNGPWL 101
           ++ + L+ R  +   +       W + N +   V+      F F SEID   V+R  PWL
Sbjct: 39  LIARPLNPRSQNLHAVISALPRAWGLTNRVHGRVLNDTFVQFIFQSEIDLLSVLRREPWL 98

Query: 102 FDRFLLVFEKPQPFVKPSQMQFNFVAFWVHFLDIPLTCFNKEMAERLGNAMGVFEEFDDK 161
           ++ + +  ++ +  V  +      +  WV    IPL    +E A  + + +G     D  
Sbjct: 99  YNNWFVTAQRWE--VNLTFHLLTSIELWVQMRGIPLLYVCEETALEIAHELGEIITLDFH 158

Query: 162 EGTLCWGASMRVKIRINIRKPLRRGIKLNLEGPMGGVLIPIKYEKLPHFCSHCGIIGHHF 221
           + T    A +RV+IR  I   LR  +++  +      LI  +YE+L   CS C  + HH 
Sbjct: 159 DSTTTQIAYIRVRIRFGITDRLRFFLRIIFDSG-ETALISFQYERLRRICSSCFRMTHHR 218

Query: 222 KDC 225
             C
Sbjct: 219 NSC 218

BLAST of Tan0002476 vs. TAIR 10
Match: AT2G41590.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25200.1); Has 221 Blast hits to 217 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 221; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 67.8 bits (164), Expect = 3.1e-11
Identity = 45/185 (24.32%), Postives = 78/185 (42.16%), Query Frame = 0

Query: 42  MVGKLLSSRVVSAEVIRKTFKTTWKIDNGLEVEVIGKNQFIFRFPSEIDRFLVVRNGPWL 101
           M+ + L+ RV +   +      TW + N +   ++      F F +EID  +V R  PWL
Sbjct: 39  MIARPLNPRVQNLNSVVVALPRTWGLTNQVHGRILDATYVQFLFQNEIDLMMVQRKEPWL 98

Query: 102 FDRFLLVFEKPQPFVKPSQMQFNFVAFWVHFLDIPLTCFNKEMAERLGNAMGVFEEFDDK 161
           F+ + +   + +  V P+      +  WV    IPL   ++E    +   +G     D  
Sbjct: 99  FNNWFVAATRWE--VAPAHNFVTTIDLWVQIRGIPLPYVSEETVMEIAQDLGEVLMLDYH 158

Query: 162 EGTLCWGASMRVKIRINIRKPLRRGIKLNLEGPMGGVLIPIKYEKLPHFCSHCGIIGHHF 221
           + T    A +RV++R  I   LR   ++  +       I  +YE+L   CS C    H+ 
Sbjct: 159 DTTSIQIAYIRVRVRFGITDRLRFFQRIVFDSGETAT-IRFQYERLRRICSSCFRFTHNR 218

Query: 222 KDCNF 227
             C +
Sbjct: 219 AYCPY 220

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022156185.13.4e-6039.71uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncha... [more]
XP_022132681.18.7e-5643.48uncharacterized protein LOC111005481 [Momordica charantia][more]
XP_022158377.14.5e-5235.88uncharacterized protein LOC111024874 [Momordica charantia][more]
XP_028124075.13.8e-4339.02uncharacterized protein LOC114321128 [Camellia sinensis][more]
XP_028122006.12.5e-4238.21uncharacterized protein LOC114319195 [Camellia sinensis][more]
Match NameE-valueIdentityDescription
A0A6J1DU551.7e-6039.71uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1BSZ14.2e-5643.48uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005... [more]
A0A6J1DX302.2e-5235.88uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A5C7ICE51.7e-3631.92CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_00816... [more]
A0A5C7IHI06.3e-3639.62CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_00347... [more]
Match NameE-valueIdentityDescription
AT5G36228.11.2e-1524.86nucleic acid binding;zinc ion binding [more]
AT2G17920.13.3e-1325.41nucleic acid binding;zinc ion binding [more]
AT3G31430.15.7e-1325.54unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G13450.11.7e-1225.14unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT2G41590.13.1e-1124.32unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025836Zinc knuckle CX2CX4HX4CPFAMPF14392zf-CCHC_4coord: 178..225
e-value: 4.3E-12
score: 45.5
IPR025558Domain of unknown function DUF4283PFAMPF14111DUF4283coord: 34..175
e-value: 4.1E-28
score: 97.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 510..534
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 494..534
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 276..293
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 257..307
NoneNo IPR availablePANTHERPTHR31286:SF84SUBFAMILY NOT NAMEDcoord: 11..281
IPR040256Uncharacterized protein At4g02000-likePANTHERPTHR31286GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKEcoord: 11..281

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0002476.1Tan0002476.1mRNA