Tan0002476 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACCAAGAGGGACTAATCGAGGATTGGAGTAAGCTGAACTTGACTACAGAGGATGAGGAAGTCTCAGTTGATGTAAGAGTGGGAACTGATCAGTCTACCGAATTGTTATTTGAAGGATGTATGGTCGGGAAGCTTCTTTCTTCAAGAGTTGTTTCAGCTGAGGTAATTCGAAAAACCTTTAAAACAACTTGGAAAATAGATAATGGGTTAGAGGTTGAAGTTATTGGGAAAAATCAATTCATCTTTAGGTTTCCAAGCGAAATAGATCGATTTCTAGTTGTACGTAATGGCCCTTGGTTGTTTGATCGCTTCCTACTCGTCTTTGAAAAACCACAACCGTTTGTAAAACCCTCTCAGATGCAGTTTAATTTTGTTGCGTTTTGGGTCCATTTTCTTGATATCCCATTAACCTGCTTTAACAAAGAGATGGCAGAGAGGCTGGGGAATGCAATGGGTGTGTTTGAAGAGTTCGATGACAAAGAGGGAACTTTATGCTGGGGGGCGAGTATGAGAGTTAAAATCCGTATAAATATCAGGAAACCATTGAGAAGAGGAATTAAGTTGAACTTAGAGGGACCTATGGGAGGAGTTCTTATCCCAATTAAGTATGAAAAACTACCACATTTTTGCTCCCATTGTGGCATCATAGGTCACCACTTTAAGGATTGCAATTTCTTCTACAAAAATGCCGACCCAAAATTGAACTTCCATCAGTATGGTCAAGGTCTAAGGTATAATGGGAGATTCACGTCGGTTGCCCGATCCCCTACGAATAATTCCGACTTCCGCATAAATGGAGACAAAGCAGAAACAAACTTAGGAAGGGAAAGAGTGAGCCCGACGAATGGTCCTCCATCTGGAACTCACAAGCAGAGGCAGAATATGGGAAGCAAGGAGAAGATCGGTGTACCTGGTTCGAACGATCAGATGGATGTTGGCGAGTCACTGGCGTCTGACCGTTTCCCATCGCCGATCAGCATTGATGGCATCATTAATTCATCTGCTAATATTTCGGAGTGCTCATTGATGGAGCAATCTCCGGAATTAATGTCGCCCGCCATCTCCGGAGGAATTGTAGCAGCAGAGGAACAAAAGAGAAACGGCTGTGCAAGGAAGCTAGATTTTGGGAATGAGGGAGGAAACGTTTCGGGGAGGAAATCTAACCCTGATTTTAAAAAAGTGAATGGGCCTGAGATGGTGGACCTGGCGGTTGAGGAGGTTTCCATGAAAGGCAAGGGACTGGCAGATATGGGCCAGGTATTCAAATCCCTTGGGCCTCTGCCGGATGGTGCATTGCCATCAACTGAGGAAAATTCGAACCTGCTGCACGATCAACCCAACAAGTCTGCAAATCTAGTAATACAACCGAATGATTCAAAGGTGAATGGTAGCAATTTCCTCACTCCTGCTAACAATAAAATTCACAGCCCCTTTTATAATGACTTCAGGGGAAATGAAAGAAAGTGGAAGCGAATGGCTCGAGATTCTCCGAAGACCTGGCAGAATGATGGGCAGATGGAAATGGCGGGGAAGCGCAAGGGGCAAGATAAAGAAGACATGGTTGGGCCGAAGAAGCCAAAATTGGTGGACCCTAAGGTGACGACTCACAATGAACAAGCAATATCGGTGGAGGCTGCAGGTCAGCCCCGCCGGGCACAATGAGAATAATTTGTTGGAATGTCCATGGTTTGGGGAGTACACGGGCATTCCGTGACGTTCACGAAAACTTACAAATTTTAAACCCCGATTTATGTTTTTTGTTGGAAACTAAGTGTAATCCCTTTATTTTGAATAAGTTAAAGAACTGCTTACATTATGTTGGTTGTTTTGTAGTAGAACGTACTGGCCTAGGGGGTGGGTTATGTCTCCTTTGGCGCGAAAATATGGTTGTTTCAATTCGTTCCTATTCACAATCTCATATTGACGCGGGGATCAAATGGCAAAATAAGTGGTGGAGGTTCACAGGGATATATGGCCAACCTGAGCATACCTTGAGGTGGAAAACCTGGGAATTATTGCGAATATTAAGGGGTCATCATAATGAACCGTGGGTGGTGGGAGGTGATTTGAACGAAATCCTATGGGATTTTGAGAAGAGAGGAGGGAGGGATAGAGAAAGAGGATTGATATATAACTTCAGATCAATGTTAGATGATTGCAATTTACAGGATTTGGGGTTTGAGGGTGATGCCTACACCTGGTGCAACTGA ATGGACCAAGAGGGACTAATCGAGGATTGGAGTAAGCTGAACTTGACTACAGAGGATGAGGAAGTCTCAGTTGATGTAAGAGTGGGAACTGATCAGTCTACCGAATTGTTATTTGAAGGATGTATGGTCGGGAAGCTTCTTTCTTCAAGAGTTGTTTCAGCTGAGGTAATTCGAAAAACCTTTAAAACAACTTGGAAAATAGATAATGGGTTAGAGGTTGAAGTTATTGGGAAAAATCAATTCATCTTTAGGTTTCCAAGCGAAATAGATCGATTTCTAGTTGTACGTAATGGCCCTTGGTTGTTTGATCGCTTCCTACTCGTCTTTGAAAAACCACAACCGTTTGTAAAACCCTCTCAGATGCAGTTTAATTTTGTTGCGTTTTGGGTCCATTTTCTTGATATCCCATTAACCTGCTTTAACAAAGAGATGGCAGAGAGGCTGGGGAATGCAATGGGTGTGTTTGAAGAGTTCGATGACAAAGAGGGAACTTTATGCTGGGGGGCGAGTATGAGAGTTAAAATCCGTATAAATATCAGGAAACCATTGAGAAGAGGAATTAAGTTGAACTTAGAGGGACCTATGGGAGGAGTTCTTATCCCAATTAAGTATGAAAAACTACCACATTTTTGCTCCCATTGTGGCATCATAGGTCACCACTTTAAGGATTGCAATTTCTTCTACAAAAATGCCGACCCAAAATTGAACTTCCATCAGTATGGTCAAGGTCTAAGGTATAATGGGAGATTCACGTCGGTTGCCCGATCCCCTACGAATAATTCCGACTTCCGCATAAATGGAGACAAAGCAGAAACAAACTTAGGAAGGGAAAGAGTGAGCCCGACGAATGGTCCTCCATCTGGAACTCACAAGCAGAGGCAGAATATGGGAAGCAAGGAGAAGATCGGTGTACCTGGTTCGAACGATCAGATGGATGTTGGCGAGTCACTGGCGTCTGACCGTTTCCCATCGCCGATCAGCATTGATGGCATCATTAATTCATCTGCTAATATTTCGGAGTGCTCATTGATGGAGCAATCTCCGGAATTAATGTCGCCCGCCATCTCCGGAGGAATTGTAGCAGCAGAGGAACAAAAGAGAAACGGCTGTGCAAGGAAGCTAGATTTTGGGAATGAGGGAGGAAACGTTTCGGGGAGGAAATCTAACCCTGATTTTAAAAAAGTGAATGGGCCTGAGATGGTGGACCTGGCGGTTGAGGAGGTTTCCATGAAAGGCAAGGGACTGGCAGATATGGGCCAGGTATTCAAATCCCTTGGGCCTCTGCCGGATGGTGCATTGCCATCAACTGAGGAAAATTCGAACCTGCTGCACGATCAACCCAACAAGTCTGCAAATCTAGTAATACAACCGAATGATTCAAAGGTGAATGGTAGCAATTTCCTCACTCCTGCTAACAATAAAATTCACAGCCCCTTTTATAATGACTTCAGGGGAAATGAAAGAAAGTGGAAGCGAATGGCTCGAGATTCTCCGAAGACCTGGCAGAATGATGGGCAGATGGAAATGGCGGGGAAGCGCAAGGGGCAAGATAAAGAAGACATGGTTGGGCCGAAGAAGCCAAAATTGGTGGACCCTAAGGATTTGGGGTTTGAGGGTGATGCCTACACCTGGTGCAACTGA ATGGACCAAGAGGGACTAATCGAGGATTGGAGTAAGCTGAACTTGACTACAGAGGATGAGGAAGTCTCAGTTGATGTAAGAGTGGGAACTGATCAGTCTACCGAATTGTTATTTGAAGGATGTATGGTCGGGAAGCTTCTTTCTTCAAGAGTTGTTTCAGCTGAGGTAATTCGAAAAACCTTTAAAACAACTTGGAAAATAGATAATGGGTTAGAGGTTGAAGTTATTGGGAAAAATCAATTCATCTTTAGGTTTCCAAGCGAAATAGATCGATTTCTAGTTGTACGTAATGGCCCTTGGTTGTTTGATCGCTTCCTACTCGTCTTTGAAAAACCACAACCGTTTGTAAAACCCTCTCAGATGCAGTTTAATTTTGTTGCGTTTTGGGTCCATTTTCTTGATATCCCATTAACCTGCTTTAACAAAGAGATGGCAGAGAGGCTGGGGAATGCAATGGGTGTGTTTGAAGAGTTCGATGACAAAGAGGGAACTTTATGCTGGGGGGCGAGTATGAGAGTTAAAATCCGTATAAATATCAGGAAACCATTGAGAAGAGGAATTAAGTTGAACTTAGAGGGACCTATGGGAGGAGTTCTTATCCCAATTAAGTATGAAAAACTACCACATTTTTGCTCCCATTGTGGCATCATAGGTCACCACTTTAAGGATTGCAATTTCTTCTACAAAAATGCCGACCCAAAATTGAACTTCCATCAGTATGGTCAAGGTCTAAGGTATAATGGGAGATTCACGTCGGTTGCCCGATCCCCTACGAATAATTCCGACTTCCGCATAAATGGAGACAAAGCAGAAACAAACTTAGGAAGGGAAAGAGTGAGCCCGACGAATGGTCCTCCATCTGGAACTCACAAGCAGAGGCAGAATATGGGAAGCAAGGAGAAGATCGGTGTACCTGGTTCGAACGATCAGATGGATGTTGGCGAGTCACTGGCGTCTGACCGTTTCCCATCGCCGATCAGCATTGATGGCATCATTAATTCATCTGCTAATATTTCGGAGTGCTCATTGATGGAGCAATCTCCGGAATTAATGTCGCCCGCCATCTCCGGAGGAATTGTAGCAGCAGAGGAACAAAAGAGAAACGGCTGTGCAAGGAAGCTAGATTTTGGGAATGAGGGAGGAAACGTTTCGGGGAGGAAATCTAACCCTGATTTTAAAAAAGTGAATGGGCCTGAGATGGTGGACCTGGCGGTTGAGGAGGTTTCCATGAAAGGCAAGGGACTGGCAGATATGGGCCAGGTATTCAAATCCCTTGGGCCTCTGCCGGATGGTGCATTGCCATCAACTGAGGAAAATTCGAACCTGCTGCACGATCAACCCAACAAGTCTGCAAATCTAGTAATACAACCGAATGATTCAAAGGTGAATGGTAGCAATTTCCTCACTCCTGCTAACAATAAAATTCACAGCCCCTTTTATAATGACTTCAGGGGAAATGAAAGAAAGTGGAAGCGAATGGCTCGAGATTCTCCGAAGACCTGGCAGAATGATGGGCAGATGGAAATGGCGGGGAAGCGCAAGGGGCAAGATAAAGAAGACATGGTTGGGCCGAAGAAGCCAAAATTGGTGGACCCTAAGGATTTGGGGTTTGAGGGTGATGCCTACACCTGGTGCAACTGA MDQEGLIEDWSKLNLTTEDEEVSVDVRVGTDQSTELLFEGCMVGKLLSSRVVSAEVIRKTFKTTWKIDNGLEVEVIGKNQFIFRFPSEIDRFLVVRNGPWLFDRFLLVFEKPQPFVKPSQMQFNFVAFWVHFLDIPLTCFNKEMAERLGNAMGVFEEFDDKEGTLCWGASMRVKIRINIRKPLRRGIKLNLEGPMGGVLIPIKYEKLPHFCSHCGIIGHHFKDCNFFYKNADPKLNFHQYGQGLRYNGRFTSVARSPTNNSDFRINGDKAETNLGRERVSPTNGPPSGTHKQRQNMGSKEKIGVPGSNDQMDVGESLASDRFPSPISIDGIINSSANISECSLMEQSPELMSPAISGGIVAAEEQKRNGCARKLDFGNEGGNVSGRKSNPDFKKVNGPEMVDLAVEEVSMKGKGLADMGQVFKSLGPLPDGALPSTEENSNLLHDQPNKSANLVIQPNDSKVNGSNFLTPANNKIHSPFYNDFRGNERKWKRMARDSPKTWQNDGQMEMAGKRKGQDKEDMVGPKKPKLVDPKDLGFEGDAYTWCN Homology
BLAST of Tan0002476 vs. NCBI nr
Match: XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia]) HSP 1 Score: 243.8 bits (621), Expect = 3.4e-60 Identity = 139/350 (39.71%), Postives = 198/350 (56.57%), Query Frame = 0
BLAST of Tan0002476 vs. NCBI nr
Match: XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia]) HSP 1 Score: 229.2 bits (583), Expect = 8.7e-56 Identity = 110/253 (43.48%), Postives = 154/253 (60.87%), Query Frame = 0
BLAST of Tan0002476 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia]) HSP 1 Score: 216.9 bits (551), Expect = 4.5e-52 Identity = 127/354 (35.88%), Postives = 184/354 (51.98%), Query Frame = 0
BLAST of Tan0002476 vs. NCBI nr
Match: XP_028124075.1 (uncharacterized protein LOC114321128 [Camellia sinensis]) HSP 1 Score: 187.2 bits (474), Expect = 3.8e-43 Identity = 96/246 (39.02%), Postives = 153/246 (62.20%), Query Frame = 0
BLAST of Tan0002476 vs. NCBI nr
Match: XP_028122006.1 (uncharacterized protein LOC114319195 [Camellia sinensis]) HSP 1 Score: 184.5 bits (467), Expect = 2.5e-42 Identity = 94/246 (38.21%), Postives = 154/246 (62.60%), Query Frame = 0
BLAST of Tan0002476 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1) HSP 1 Score: 243.8 bits (621), Expect = 1.7e-60 Identity = 139/350 (39.71%), Postives = 198/350 (56.57%), Query Frame = 0
BLAST of Tan0002476 vs. ExPASy TrEMBL
Match: A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 4.2e-56 Identity = 110/253 (43.48%), Postives = 154/253 (60.87%), Query Frame = 0
BLAST of Tan0002476 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1) HSP 1 Score: 216.9 bits (551), Expect = 2.2e-52 Identity = 127/354 (35.88%), Postives = 184/354 (51.98%), Query Frame = 0
BLAST of Tan0002476 vs. ExPASy TrEMBL
Match: A0A5C7ICE5 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_008162 PE=4 SV=1) HSP 1 Score: 164.1 bits (414), Expect = 1.7e-36 Identity = 98/307 (31.92%), Postives = 157/307 (51.14%), Query Frame = 0
BLAST of Tan0002476 vs. ExPASy TrEMBL
Match: A0A5C7IHI0 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_003470 PE=4 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 6.3e-36 Identity = 84/212 (39.62%), Postives = 120/212 (56.60%), Query Frame = 0
BLAST of Tan0002476 vs. TAIR 10
Match: AT5G36228.1 (nucleic acid binding;zinc ion binding ) HSP 1 Score: 82.4 bits (202), Expect = 1.2e-15 Identity = 46/185 (24.86%), Postives = 85/185 (45.95%), Query Frame = 0
BLAST of Tan0002476 vs. TAIR 10
Match: AT2G17920.1 (nucleic acid binding;zinc ion binding ) HSP 1 Score: 74.3 bits (181), Expect = 3.3e-13 Identity = 47/185 (25.41%), Postives = 80/185 (43.24%), Query Frame = 0
BLAST of Tan0002476 vs. TAIR 10
Match: AT3G31430.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18636.1); Has 295 Blast hits to 291 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 295; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 73.6 bits (179), Expect = 5.7e-13 Identity = 47/184 (25.54%), Postives = 82/184 (44.57%), Query Frame = 0
BLAST of Tan0002476 vs. TAIR 10
Match: AT2G13450.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02000.1); Has 247 Blast hits to 243 proteins in 13 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 2; Plants - 243; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 72.0 bits (175), Expect = 1.7e-12 Identity = 46/183 (25.14%), Postives = 79/183 (43.17%), Query Frame = 0
BLAST of Tan0002476 vs. TAIR 10
Match: AT2G41590.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25200.1); Has 221 Blast hits to 217 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 221; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 67.8 bits (164), Expect = 3.1e-11 Identity = 45/185 (24.32%), Postives = 78/185 (42.16%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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