Tan0001792 (gene) Snake gourd v1

Overview


Name	Tan0001792
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	RING-type domain-containing protein
Location	LG09: 66745728 .. 66748500 (-)
RNA-Seq Expression	Tan0001792
Synteny	Tan0001792

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAAACAATTGTTCGTCTCTTCTTCTAGTGATTTCCTTAAACCGTAAATCCGCAGCAACAGAAATAGCAACCTCATCCGCCGGGTTTGTGTTTCTGCTCCAAAAAGGCCCATAGCAAAGCATTCATTCAATTCAATTCAATTTCTCGTGCTCACCACCACAGATCATCGCCTAAATTTAACCTCCTAATTATATTAATCCTCACTCTCCTCGCTTTATTAACAATCTTAAAATTACTATGGGAAAGCGCAAGCGAGGCTCTGATCAGACCCTCCCCGATCTTCCTCTTCATCTCTCTGGTATGCTCTCCTTTTCTCATCATGCTCTGTTTCTGTTTGTACAAATGTCTCAAACAGATTATTCCTTTGCGTCCATACACAGTTTTTGTTATCTGGGTGTCGGTTGAGACAATGAATCATCCTTGTTTGAGCTTTGTAATTAATGGGGTGCCATGAGGGATATGGGTTTTGTAAGTAATTGGCATTTTTGGAAGTTCAATTGGGTATATGAGAATTCTCTTCAAGAATGAGCAATTTTGAGAGTTGGGGAAACTAGGAATGAAGGTTAGTTTTTCTTTGCCTTTAAGGATGCATATTCTGATTAAGAGATATAGTTTGTTGACCAATCTCAGTCAATTGGCTACTTCAATACCTTTTGGAATTAGCTTTGGGTGGATACATTTGAGTTCTCTTTCTTTTGATTAAATGAAGATTGGGATGTGGTGTTCTAGTTGTCAAGGTGGAGTTGATTTAATTTTACGCTTTGGAACTGATGTTTTTTTCCTTCTGAATTTCCTATGTTTTGAATGATGAAATGGAACATGTTTCGTACGTGTGTTGCAGGTTTAGTGCCTTTTTCCAATCAAATGGATGTGCGGTCGGAAGAGGTTTGTACTCTTTTTGTTTGCTTCAGAAATTCTACCCATGTTAAAAATGAGAAACTCTTTATACTTTACTTTGTTATTGGAATTTGCATGCTTCCTTGACCTATCTAGTTCAAGCTTCAGTGAGTAGGCAAAAGAACAGTTTAAACCTTTCCCTAACTAGAGAAACATTCAAGTTTTAAGTTTTTTCCTTTTAGTGGACCACAATCTATTAAAGCTATGTTGCAATGAACAAGCAGGATCAGAGTCTTGCTCGTCCAGTATTCATGAAACGTTCACGTCATCAGTATAGTCATCAATATTGTCGGCGAGGTTCAACCAGTCAACCAAATGCAACCACCTCCCGTGAAAACCGAGTTAGAACCATACTTGAAGAGCGACCCGCCTTTAAATTTGCTGCTCATTGCAACTCAGAGTTTCCAGGTCATATAGGTACACTTTTTGAAGTTCCTAAACACGGTTGTACATGTTTTCTCAGTGGGGAATTGGAGTACTTTTTGCGATGCCATGTTGACTTGTAATGTTCTTAATGTTATAAGATGTTTGAAAATTCGTACCTTATATATTATGTGGCTATAGAATCAGATGAAAAGACCTGAAAACATAAACTATGCTTGAATTAGGTGTTTTTTATGCCATATCTCAAATAAATTCAATTCCAACATTTCTTCTGGTTGGATGACTAGGCAGCTTGTTTTGAATTAGATTTCATGTTCTCCGTGACATCAATATATTGAGGGCTTGTTTGGAATGACTTTTTCAAGTGCTGAAAAGTCATTCAAAACAGGCTCTAAATATCAGTTGCCTATTTCTCTCTCATTTATTTTCTGTTTCAGGGATTCAAGCCAAAGGAAAAAGTAAATAGGTAAATTTTAGTAAAGTCCTGGATAAAGAACAGTGAATTGTGTGGCATGAAACACTTATTTTACTAAGGGAAATCTCCTAATATTAATGTATCATAGACCTCTGAACCAAGTTGGAATTTCTATCTAGATAAATTCTAATGATTATCTACAAAATGAAGAATGAAGCTGATAGGATTGAACAAACTATATCGCCTTCTCATCTCATGCGATTCAATGCTCTAGTTTGTTCTCTATTAACTCATCTTTTTGCATTGATTTTAGATGGAACTGAGAGCACCTTCTGGGGGCCAGAAAGGATAAGGTACAATTCCTTAGGCAAGGATGCAATTTCATCTCATGGAATAAGAATGCTATGTGGGATTTGTCACAAGCTGATGAGACGAAAGCTTTGCTTTCTCGGCAACACGCTTTCTTCCAGGGAACTTCCCGTTGCTGCAGTGTTGGTTTGTGGCCATGTCTATCATGCAGACTGTCTGGAGAACAGGTCAAAGGTCGAAGATAGGAGCGATCCACCTTGTCCATTGTGCATGGAACCGCCTATCGACGACTCAAAAGGAGGAGAACAGGAATGAGTTGAGTTGTACATATGTATGTTATCAGGTCACACCAACAATAGGAATTAGGCTTGGCTTTGACTTGTATGGGCAGCTTAACAGGTGGATTTTTTGCATCCTCGACTATTTTTCCATGAATTAATCTGTCACTGTTTTTCTGGATGGCTGTGCGTTAGAAAAAGAAAACAGTAGCTTTAAATTGTAACCATTCAGAAGACAGTGATATCGAGTCATCGAAAAATTACGAGGATTTGTGCTCCATAGATTGGTTTTTGCGTAGAATTAGACTGACAAGTGCAAGTCCTTTGTTACCTTCTGGATTTTTGTTATCTAGCAGCAGAGGATTCTAGTTAAGACATCTTCCTGGTATTGTGTACTTCTCTAGAGCAATGTCTAAAACAGTATATTTTAGGAAGTATTGATGTAAGTATAATTCTCATGAAAGTAGATTTTTTTCCCCTTTTAAAAAA

mRNA sequence

CAAAAACAATTGTTCGTCTCTTCTTCTAGTGATTTCCTTAAACCGTAAATCCGCAGCAACAGAAATAGCAACCTCATCCGCCGGGTTTGTGTTTCTGCTCCAAAAAGGCCCATAGCAAAGCATTCATTCAATTCAATTCAATTTCTCGTGCTCACCACCACAGATCATCGCCTAAATTTAACCTCCTAATTATATTAATCCTCACTCTCCTCGCTTTATTAACAATCTTAAAATTACTATGGGAAAGCGCAAGCGAGGCTCTGATCAGACCCTCCCCGATCTTCCTCTTCATCTCTCTGGTTTAGTGCCTTTTTCCAATCAAATGGATGTGCGGTCGGAAGAGGATCAGAGTCTTGCTCGTCCAGTATTCATGAAACGTTCACGTCATCAGTATAGTCATCAATATTGTCGGCGAGGTTCAACCAGTCAACCAAATGCAACCACCTCCCGTGAAAACCGAGTTAGAACCATACTTGAAGAGCGACCCGCCTTTAAATTTGCTGCTCATTGCAACTCAGAGTTTCCAGGTCATATAGATGGAACTGAGAGCACCTTCTGGGGGCCAGAAAGGATAAGGTACAATTCCTTAGGCAAGGATGCAATTTCATCTCATGGAATAAGAATGCTATGTGGGATTTGTCACAAGCTGATGAGACGAAAGCTTTGCTTTCTCGGCAACACGCTTTCTTCCAGGGAACTTCCCGTTGCTGCAGTGTTGGTTTGTGGCCATGTCTATCATGCAGACTGTCTGGAGAACAGGTCAAAGGTCGAAGATAGGAGCGATCCACCTTGTCCATTGTGCATGGAACCGCCTATCGACGACTCAAAAGGAGGAGAACAGGAATGAGTTGAGTTGTACATATGTATGTTATCAGGTCACACCAACAATAGGAATTAGGCTTGGCTTTGACTTGTATGGGCAGCTTAACAGGTGGATTTTTTGCATCCTCGACTATTTTTCCATGAATTAATCTGTCACTGTTTTTCTGGATGGCTGTGCGTTAGAAAAAGAAAACAGTAGCTTTAAATTGTAACCATTCAGAAGACAGTGATATCGAGTCATCGAAAAATTACGAGGATTTGTGCTCCATAGATTGGTTTTTGCGTAGAATTAGACTGACAAGTGCAAGTCCTTTGTTACCTTCTGGATTTTTGTTATCTAGCAGCAGAGGATTCTAGTTAAGACATCTTCCTGGTATTGTGTACTTCTCTAGAGCAATGTCTAAAACAGTATATTTTAGGAAGTATTGATGTAAGTATAATTCTCATGAAAGTAGATTTTTTTCCCCTTTTAAAAAA

Coding sequence (CDS)

ATGGGAAAGCGCAAGCGAGGCTCTGATCAGACCCTCCCCGATCTTCCTCTTCATCTCTCTGGTTTAGTGCCTTTTTCCAATCAAATGGATGTGCGGTCGGAAGAGGATCAGAGTCTTGCTCGTCCAGTATTCATGAAACGTTCACGTCATCAGTATAGTCATCAATATTGTCGGCGAGGTTCAACCAGTCAACCAAATGCAACCACCTCCCGTGAAAACCGAGTTAGAACCATACTTGAAGAGCGACCCGCCTTTAAATTTGCTGCTCATTGCAACTCAGAGTTTCCAGGTCATATAGATGGAACTGAGAGCACCTTCTGGGGGCCAGAAAGGATAAGGTACAATTCCTTAGGCAAGGATGCAATTTCATCTCATGGAATAAGAATGCTATGTGGGATTTGTCACAAGCTGATGAGACGAAAGCTTTGCTTTCTCGGCAACACGCTTTCTTCCAGGGAACTTCCCGTTGCTGCAGTGTTGGTTTGTGGCCATGTCTATCATGCAGACTGTCTGGAGAACAGGTCAAAGGTCGAAGATAGGAGCGATCCACCTTGTCCATTGTGCATGGAACCGCCTATCGACGACTCAAAAGGAGGAGAACAGGAATGA

Protein sequence

MGKRKRGSDQTLPDLPLHLSGLVPFSNQMDVRSEEDQSLARPVFMKRSRHQYSHQYCRRGSTSQPNATTSRENRVRTILEERPAFKFAAHCNSEFPGHIDGTESTFWGPERIRYNSLGKDAISSHGIRMLCGICHKLMRRKLCFLGNTLSSRELPVAAVLVCGHVYHADCLENRSKVEDRSDPPCPLCMEPPIDDSKGGEQE

Homology

[Close]

BLAST of Tan0001792 vs. NCBI nr
Match: XP_038878632.1 (uncharacterized protein LOC120070818 isoform X2 [Benincasa hispida])

HSP 1 Score: 371.3 bits (952), Expect = 5.2e-99
Identity = 176/204 (86.27%), Postives = 186/204 (91.18%), Query Frame = 0


Query: 1   MGKRKRGSDQTLPDLPLHLSGLVPFSNQMDVRSEEDQSLARPVFMKRSRHQYSHQYCRRG 60
           MGKRKRGSDQT  D PLHLSG+VPFSNQMDVRSEED+S ARPVFMKRSRHQYSHQYCRRG
Sbjct: 1   MGKRKRGSDQTHHDPPLHLSGMVPFSNQMDVRSEEDRSPARPVFMKRSRHQYSHQYCRRG 60

Query: 61  STSQPNATTSRENRVRTILEERPAFKFAAHCNSEFPGHIDGTESTFWGPERIRYNSLGKD 120
           STS  NA+ SRENRV+T+LEERPAFKFAAHCNSEFP HI+  E TFWGPERIRYNS GKD
Sbjct: 61  STSHANASMSRENRVKTVLEERPAFKFAAHCNSEFPDHIESIEKTFWGPERIRYNSFGKD 120

Query: 121 AISSHGIRMLCGICHKLMRRKLCFLGNTLSSRELPVAAVLVCGHVYHADCLENRSKVEDR 180
           A SSHG+RM+CGIC KLMRRKLCFLGNTLSS ELPVAAVLVCGHVYHA+CLENRS VEDR
Sbjct: 121 AFSSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDR 180

Query: 181 SDPPCPLCMEPP--IDDSKGGEQE 203
           SDPPCPLCMEPP  +DDSKGGEQE
Sbjct: 181 SDPPCPLCMEPPPEVDDSKGGEQE 204

[Close]

BLAST of Tan0001792 vs. NCBI nr
Match: XP_038878631.1 (uncharacterized protein LOC120070818 isoform X1 [Benincasa hispida])

HSP 1 Score: 366.7 bits (940), Expect = 1.3e-97
Identity = 176/205 (85.85%), Postives = 186/205 (90.73%), Query Frame = 0


Query: 1   MGKRKRGSDQTLPDLPLHLSGLVPFSNQMDVRSEE-DQSLARPVFMKRSRHQYSHQYCRR 60
           MGKRKRGSDQT  D PLHLSG+VPFSNQMDVRSEE D+S ARPVFMKRSRHQYSHQYCRR
Sbjct: 1   MGKRKRGSDQTHHDPPLHLSGMVPFSNQMDVRSEEQDRSPARPVFMKRSRHQYSHQYCRR 60

Query: 61  GSTSQPNATTSRENRVRTILEERPAFKFAAHCNSEFPGHIDGTESTFWGPERIRYNSLGK 120
           GSTS  NA+ SRENRV+T+LEERPAFKFAAHCNSEFP HI+  E TFWGPERIRYNS GK
Sbjct: 61  GSTSHANASMSRENRVKTVLEERPAFKFAAHCNSEFPDHIESIEKTFWGPERIRYNSFGK 120

Query: 121 DAISSHGIRMLCGICHKLMRRKLCFLGNTLSSRELPVAAVLVCGHVYHADCLENRSKVED 180
           DA SSHG+RM+CGIC KLMRRKLCFLGNTLSS ELPVAAVLVCGHVYHA+CLENRS VED
Sbjct: 121 DAFSSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVED 180

Query: 181 RSDPPCPLCMEPP--IDDSKGGEQE 203
           RSDPPCPLCMEPP  +DDSKGGEQE
Sbjct: 181 RSDPPCPLCMEPPPEVDDSKGGEQE 205

[Close]

BLAST of Tan0001792 vs. NCBI nr
Match: XP_022134599.1 (uncharacterized protein LOC111006826 [Momordica charantia])

HSP 1 Score: 366.3 bits (939), Expect = 1.7e-97
Identity = 178/203 (87.68%), Postives = 186/203 (91.63%), Query Frame = 0


Query: 1   MGKRKR-GSDQTLPDLPLHLSGLVPFSNQMDVRSEEDQSLARPVFMKRSRHQYSHQYCRR 60
           MGKRKR  SD T PD PLHLSG+VPFSNQMDV SEEDQSLARPVFMKRSRHQYSHQYCRR
Sbjct: 1   MGKRKRASSDHTHPDPPLHLSGVVPFSNQMDVLSEEDQSLARPVFMKRSRHQYSHQYCRR 60

Query: 61  GSTSQPNATTSRENRVRTILEERPAFKFAAHCNSEFPGHIDGTESTFWGPERIRYNSLGK 120
           GSTSQ NA+TSRENRVRT+LEERPAFKFAAHCNSEFP HI+  E+TFWGPERIRY+SLGK
Sbjct: 61  GSTSQANASTSRENRVRTVLEERPAFKFAAHCNSEFPNHIESIENTFWGPERIRYSSLGK 120

Query: 121 DAISSHGIRMLCGICHKLMRRKLCFLGNTLSSRELPVAAVLVCGHVYHADCLENRSKVED 180
           DAISSHG+RMLCGIC KLMRRKLCFLGNTLSS ELPVAAVLVCGHVYHADCLE RSKVED
Sbjct: 121 DAISSHGVRMLCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLEIRSKVED 180

Query: 181 RSDPPCPLCMEP--PIDDSKGGE 201
           RSDPPCPLC EP   IDDSKGG+
Sbjct: 181 RSDPPCPLCTEPSTKIDDSKGGQ 203

[Close]

BLAST of Tan0001792 vs. NCBI nr
Match: TYK06338.1 (uncharacterized protein E5676_scaffold163G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 360.5 bits (924), Expect = 9.2e-96
Identity = 174/204 (85.29%), Postives = 184/204 (90.20%), Query Frame = 0


Query: 1   MGKRKRGSDQTLPDLPLHLSGLVPFSNQMDVRSEEDQSLARPVFMKRSRHQYSHQYCRRG 60
           MGKRKRGSDQT  D PLHLSG+VPFSNQ DVRSEED SLARP+FMKRSRH YSHQYCRRG
Sbjct: 1   MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHYSHQYCRRG 60

Query: 61  STSQPNATTSRENRVRTILEERPAFKFAAHCNSEFPGHIDGTESTFWGPERIRYNSLGKD 120
           STSQ NA+TSRENRVRT+LEERPAFKFAAHCNSEFP  I+  ESTF GPERIRYNSLGKD
Sbjct: 61  STSQANASTSRENRVRTVLEERPAFKFAAHCNSEFPDRIESIESTFRGPERIRYNSLGKD 120

Query: 121 AISSHGIRMLCGICHKLMRRKLCFLGNTLSSRELPVAAVLVCGHVYHADCLENRSKVEDR 180
           AISSH +RM+CGIC KLMRRKLCFLGNTLSS ELPVAAVLVCGHVYHA+CLENRS VEDR
Sbjct: 121 AISSHLVRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDR 180

Query: 181 SDPPCPLC--MEPPIDDSKGGEQE 203
           SDPPCPLC  + P +DDSKGGEQE
Sbjct: 181 SDPPCPLCTKLPPEVDDSKGGEQE 204

[Close]

BLAST of Tan0001792 vs. NCBI nr
Match: XP_008443927.1 (PREDICTED: uncharacterized protein LOC103487402 isoform X2 [Cucumis melo] >KAA0050085.1 uncharacterized protein E6C27_scaffold675G00690 [Cucumis melo var. makuwa])

HSP 1 Score: 359.8 bits (922), Expect = 1.6e-95
Identity = 174/204 (85.29%), Postives = 184/204 (90.20%), Query Frame = 0


Query: 1   MGKRKRGSDQTLPDLPLHLSGLVPFSNQMDVRSEEDQSLARPVFMKRSRHQYSHQYCRRG 60
           MGKRKRGSDQT  D PLHLSG+VPFSNQ DVRSEED SLARP+FMKRSRH YSHQYCRRG
Sbjct: 1   MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHYSHQYCRRG 60

Query: 61  STSQPNATTSRENRVRTILEERPAFKFAAHCNSEFPGHIDGTESTFWGPERIRYNSLGKD 120
           STSQ NA+TSRENRVRT+LEERPAFKFAAHCNSEFP  I+  ESTF GPERIRYNSLGKD
Sbjct: 61  STSQANASTSRENRVRTVLEERPAFKFAAHCNSEFPDRIESIESTFRGPERIRYNSLGKD 120

Query: 121 AISSHGIRMLCGICHKLMRRKLCFLGNTLSSRELPVAAVLVCGHVYHADCLENRSKVEDR 180
           AISSH +RM+CGIC KLMRRKLCFLGNTLSS ELPVAAVLVCGHVYHA+CLENRS VEDR
Sbjct: 121 AISSHLMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDR 180

Query: 181 SDPPCPLC--MEPPIDDSKGGEQE 203
           SDPPCPLC  + P +DDSKGGEQE
Sbjct: 181 SDPPCPLCTKLPPEVDDSKGGEQE 204

[Close]

BLAST of Tan0001792 vs. ExPASy TrEMBL
Match: A0A6J1BZ68 (uncharacterized protein LOC111006826 OS=Momordica charantia OX=3673 GN=LOC111006826 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 8.2e-98
Identity = 178/203 (87.68%), Postives = 186/203 (91.63%), Query Frame = 0


Query: 1   MGKRKR-GSDQTLPDLPLHLSGLVPFSNQMDVRSEEDQSLARPVFMKRSRHQYSHQYCRR 60
           MGKRKR  SD T PD PLHLSG+VPFSNQMDV SEEDQSLARPVFMKRSRHQYSHQYCRR
Sbjct: 1   MGKRKRASSDHTHPDPPLHLSGVVPFSNQMDVLSEEDQSLARPVFMKRSRHQYSHQYCRR 60

Query: 61  GSTSQPNATTSRENRVRTILEERPAFKFAAHCNSEFPGHIDGTESTFWGPERIRYNSLGK 120
           GSTSQ NA+TSRENRVRT+LEERPAFKFAAHCNSEFP HI+  E+TFWGPERIRY+SLGK
Sbjct: 61  GSTSQANASTSRENRVRTVLEERPAFKFAAHCNSEFPNHIESIENTFWGPERIRYSSLGK 120

Query: 121 DAISSHGIRMLCGICHKLMRRKLCFLGNTLSSRELPVAAVLVCGHVYHADCLENRSKVED 180
           DAISSHG+RMLCGIC KLMRRKLCFLGNTLSS ELPVAAVLVCGHVYHADCLE RSKVED
Sbjct: 121 DAISSHGVRMLCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLEIRSKVED 180

Query: 181 RSDPPCPLCMEP--PIDDSKGGE 201
           RSDPPCPLC EP   IDDSKGG+
Sbjct: 181 RSDPPCPLCTEPSTKIDDSKGGQ 203

[Close]

BLAST of Tan0001792 vs. ExPASy TrEMBL
Match: A0A5D3C5B4 (RING-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G00020 PE=4 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 4.5e-96
Identity = 174/204 (85.29%), Postives = 184/204 (90.20%), Query Frame = 0


Query: 1   MGKRKRGSDQTLPDLPLHLSGLVPFSNQMDVRSEEDQSLARPVFMKRSRHQYSHQYCRRG 60
           MGKRKRGSDQT  D PLHLSG+VPFSNQ DVRSEED SLARP+FMKRSRH YSHQYCRRG
Sbjct: 1   MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHYSHQYCRRG 60

Query: 61  STSQPNATTSRENRVRTILEERPAFKFAAHCNSEFPGHIDGTESTFWGPERIRYNSLGKD 120
           STSQ NA+TSRENRVRT+LEERPAFKFAAHCNSEFP  I+  ESTF GPERIRYNSLGKD
Sbjct: 61  STSQANASTSRENRVRTVLEERPAFKFAAHCNSEFPDRIESIESTFRGPERIRYNSLGKD 120

Query: 121 AISSHGIRMLCGICHKLMRRKLCFLGNTLSSRELPVAAVLVCGHVYHADCLENRSKVEDR 180
           AISSH +RM+CGIC KLMRRKLCFLGNTLSS ELPVAAVLVCGHVYHA+CLENRS VEDR
Sbjct: 121 AISSHLVRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDR 180

Query: 181 SDPPCPLC--MEPPIDDSKGGEQE 203
           SDPPCPLC  + P +DDSKGGEQE
Sbjct: 181 SDPPCPLCTKLPPEVDDSKGGEQE 204

[Close]

BLAST of Tan0001792 vs. ExPASy TrEMBL
Match: A0A5A7U906 (RING-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00690 PE=4 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 7.6e-96
Identity = 174/204 (85.29%), Postives = 184/204 (90.20%), Query Frame = 0


Query: 1   MGKRKRGSDQTLPDLPLHLSGLVPFSNQMDVRSEEDQSLARPVFMKRSRHQYSHQYCRRG 60
           MGKRKRGSDQT  D PLHLSG+VPFSNQ DVRSEED SLARP+FMKRSRH YSHQYCRRG
Sbjct: 1   MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHYSHQYCRRG 60

Query: 61  STSQPNATTSRENRVRTILEERPAFKFAAHCNSEFPGHIDGTESTFWGPERIRYNSLGKD 120
           STSQ NA+TSRENRVRT+LEERPAFKFAAHCNSEFP  I+  ESTF GPERIRYNSLGKD
Sbjct: 61  STSQANASTSRENRVRTVLEERPAFKFAAHCNSEFPDRIESIESTFRGPERIRYNSLGKD 120

Query: 121 AISSHGIRMLCGICHKLMRRKLCFLGNTLSSRELPVAAVLVCGHVYHADCLENRSKVEDR 180
           AISSH +RM+CGIC KLMRRKLCFLGNTLSS ELPVAAVLVCGHVYHA+CLENRS VEDR
Sbjct: 121 AISSHLMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDR 180

Query: 181 SDPPCPLC--MEPPIDDSKGGEQE 203
           SDPPCPLC  + P +DDSKGGEQE
Sbjct: 181 SDPPCPLCTKLPPEVDDSKGGEQE 204

[Close]

BLAST of Tan0001792 vs. ExPASy TrEMBL
Match: A0A1S3B956 (uncharacterized protein LOC103487402 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487402 PE=4 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 7.6e-96
Identity = 174/204 (85.29%), Postives = 184/204 (90.20%), Query Frame = 0


Query: 1   MGKRKRGSDQTLPDLPLHLSGLVPFSNQMDVRSEEDQSLARPVFMKRSRHQYSHQYCRRG 60
           MGKRKRGSDQT  D PLHLSG+VPFSNQ DVRSEED SLARP+FMKRSRH YSHQYCRRG
Sbjct: 1   MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHYSHQYCRRG 60

Query: 61  STSQPNATTSRENRVRTILEERPAFKFAAHCNSEFPGHIDGTESTFWGPERIRYNSLGKD 120
           STSQ NA+TSRENRVRT+LEERPAFKFAAHCNSEFP  I+  ESTF GPERIRYNSLGKD
Sbjct: 61  STSQANASTSRENRVRTVLEERPAFKFAAHCNSEFPDRIESIESTFRGPERIRYNSLGKD 120

Query: 121 AISSHGIRMLCGICHKLMRRKLCFLGNTLSSRELPVAAVLVCGHVYHADCLENRSKVEDR 180
           AISSH +RM+CGIC KLMRRKLCFLGNTLSS ELPVAAVLVCGHVYHA+CLENRS VEDR
Sbjct: 121 AISSHLMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDR 180

Query: 181 SDPPCPLC--MEPPIDDSKGGEQE 203
           SDPPCPLC  + P +DDSKGGEQE
Sbjct: 181 SDPPCPLCTKLPPEVDDSKGGEQE 204

[Close]

BLAST of Tan0001792 vs. ExPASy TrEMBL
Match: A0A6J1L7P0 (uncharacterized protein LOC111499940 OS=Cucurbita maxima OX=3661 GN=LOC111499940 PE=4 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 6.5e-95
Identity = 175/202 (86.63%), Postives = 181/202 (89.60%), Query Frame = 0


Query: 1   MGKRKRGSDQTLPDLPLHLSGLVPFSNQMDVRSEEDQSLARPVFMKRSRHQYSHQYCRRG 60
           MGKRKR +DQTLPD P H SG V FSNQMDVRSEEDQ+LARPVFMKR  HQYSHQY RRG
Sbjct: 1   MGKRKRDTDQTLPDRPFHFSGPVTFSNQMDVRSEEDQTLARPVFMKRLCHQYSHQYYRRG 60

Query: 61  STSQPNATTSRENRVRTILEERPAFKFAAHCNSEFPGHIDGTESTFWGPERIRYNSLGKD 120
           S SQ NA+TS ENRVRTILEERPAFKFAAH NSEFP HIDG E +FWGPERIRYNSLGKD
Sbjct: 61  SISQANASTSCENRVRTILEERPAFKFAAHRNSEFPDHIDGIERSFWGPERIRYNSLGKD 120

Query: 121 AISSHGIRMLCGICHKLMRRKLCFLGNTLSSRELPVAAVLVCGHVYHADCLENRSKVEDR 180
           AISS+G+RMLCGICHKLMRRKLC LGNTLSSRELPVAAVLVCGHVYHADCLENR  VEDR
Sbjct: 121 AISSNGMRMLCGICHKLMRRKLCSLGNTLSSRELPVAAVLVCGHVYHADCLENRPNVEDR 180

Query: 181 SDPPCPLCMEPPIDDSKGGEQE 203
           SDPPCPLC EPPIDDSK GEQE
Sbjct: 181 SDPPCPLCTEPPIDDSK-GEQE 201

[Close]

BLAST of Tan0001792 vs. TAIR 10
Match: AT1G75400.1 (RING/U-box superfamily protein )

HSP 1 Score: 67.0 bits (162), Expect = 2.0e-11
Identity = 27/61 (44.26%), Postives = 42/61 (68.85%), Query Frame = 0


Query: 128 RMLCGICHKLMRRKLCFLGNTLSSRELPVAAVLVCGHVYHADCLENRSKVEDRSDPPCPL 187
           + +CG C KL+  +     +++++ ELP+AAVL CGHVYHA+CLE  +   ++ DP CP+
Sbjct: 278 QQVCGACSKLLTER-----SSIATFELPIAAVLACGHVYHAECLETMTTDIEKYDPACPI 333

Query: 188 C 189
           C
Sbjct: 338 C 333

[Close]

BLAST of Tan0001792 vs. TAIR 10
Match: AT4G39140.1 (RING/U-box superfamily protein )

HSP 1 Score: 65.1 bits (157), Expect = 7.5e-11
Identity = 32/79 (40.51%), Postives = 42/79 (53.16%), Query Frame = 0


Query: 117 LGKDAISSHGIRM------LCGICHK-LMRRKLCFLGNTLSSRELPVAAVLVCGHVYHAD 176
           L +D I  HG RM       CG C + L  + L        + EL V+A+L CGHVYH +
Sbjct: 240 LQRDKIDHHGNRMSKHQQHTCGACSRPLSEKSLWSSQKIFMTNELSVSAILACGHVYHGE 299

Query: 177 CLENRSKVEDRSDPPCPLC 189
           CLE  +   D+ DP CP+C
Sbjct: 300 CLEQMTPEIDKFDPSCPIC 318

[Close]

BLAST of Tan0001792 vs. TAIR 10
Match: AT4G39140.2 (RING/U-box superfamily protein )

HSP 1 Score: 65.1 bits (157), Expect = 7.5e-11
Identity = 32/79 (40.51%), Postives = 42/79 (53.16%), Query Frame = 0


Query: 117 LGKDAISSHGIRM------LCGICHK-LMRRKLCFLGNTLSSRELPVAAVLVCGHVYHAD 176
           L +D I  HG RM       CG C + L  + L        + EL V+A+L CGHVYH +
Sbjct: 240 LQRDKIDHHGNRMSKHQQHTCGACSRPLSEKSLWSSQKIFMTNELSVSAILACGHVYHGE 299

Query: 177 CLENRSKVEDRSDPPCPLC 189
           CLE  +   D+ DP CP+C
Sbjct: 300 CLEQMTPEIDKFDPSCPIC 318

[Close]

BLAST of Tan0001792 vs. TAIR 10
Match: AT4G39140.3 (RING/U-box superfamily protein )

HSP 1 Score: 65.1 bits (157), Expect = 7.5e-11
Identity = 32/79 (40.51%), Postives = 42/79 (53.16%), Query Frame = 0


Query: 117 LGKDAISSHGIRM------LCGICHK-LMRRKLCFLGNTLSSRELPVAAVLVCGHVYHAD 176
           L +D I  HG RM       CG C + L  + L        + EL V+A+L CGHVYH +
Sbjct: 240 LQRDKIDHHGNRMSKHQQHTCGACSRPLSEKSLWSSQKIFMTNELSVSAILACGHVYHGE 299

Query: 177 CLENRSKVEDRSDPPCPLC 189
           CLE  +   D+ DP CP+C
Sbjct: 300 CLEQMTPEIDKFDPSCPIC 318

[Close]

BLAST of Tan0001792 vs. TAIR 10
Match: AT4G39140.4 (RING/U-box superfamily protein )

HSP 1 Score: 65.1 bits (157), Expect = 7.5e-11
Identity = 32/79 (40.51%), Postives = 42/79 (53.16%), Query Frame = 0


Query: 117 LGKDAISSHGIRM------LCGICHK-LMRRKLCFLGNTLSSRELPVAAVLVCGHVYHAD 176
           L +D I  HG RM       CG C + L  + L        + EL V+A+L CGHVYH +
Sbjct: 240 LQRDKIDHHGNRMSKHQQHTCGACSRPLSEKSLWSSQKIFMTNELSVSAILACGHVYHGE 299

Query: 177 CLENRSKVEDRSDPPCPLC 189
           CLE  +   D+ DP CP+C
Sbjct: 300 CLEQMTPEIDKFDPSCPIC 318

The following BLAST results are available for this feature:

BLAST of Tan0001792 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0001792 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878632.1	5.2e-99	86.27	uncharacterized protein LOC120070818 isoform X2 [Benincasa hispida]	[more]
XP_038878631.1	1.3e-97	85.85	uncharacterized protein LOC120070818 isoform X1 [Benincasa hispida]	[more]
XP_022134599.1	1.7e-97	87.68	uncharacterized protein LOC111006826 [Momordica charantia]	[more]
TYK06338.1	9.2e-96	85.29	uncharacterized protein E5676_scaffold163G00020 [Cucumis melo var. makuwa]	[more]
XP_008443927.1	1.6e-95	85.29	PREDICTED: uncharacterized protein LOC103487402 isoform X2 [Cucumis melo] >KAA00...	[more]

BLAST of Tan0001792 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BZ68	8.2e-98	87.68	uncharacterized protein LOC111006826 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]
A0A5D3C5B4	4.5e-96	85.29	RING-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A5A7U906	7.6e-96	85.29	RING-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A1S3B956	7.6e-96	85.29	uncharacterized protein LOC103487402 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1L7P0	6.5e-95	86.63	uncharacterized protein LOC111499940 OS=Cucurbita maxima OX=3661 GN=LOC111499940...	[more]

BLAST of Tan0001792 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75400.1	2.0e-11	44.26	RING/U-box superfamily protein	[more]
AT4G39140.1	7.5e-11	40.51	RING/U-box superfamily protein	[more]
AT4G39140.2	7.5e-11	40.51	RING/U-box superfamily protein	[more]
AT4G39140.3	7.5e-11	40.51	RING/U-box superfamily protein	[more]
AT4G39140.4	7.5e-11	40.51	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 131..188 e-value: 2.0E-4 score: 30.7
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 131..188 score: 10.202563
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 128..192 e-value: 1.0E-6 score: 30.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..202
None	No IPR available	PANTHER	PTHR31150:SF6	CHROMATIN REGULATOR PHD FAMILY-RELATED	coord: 35..193
None	No IPR available	PANTHER	PTHR31150	EXPRESSED PROTEIN	coord: 35..193
None	No IPR available	CDD	cd16448	RING-H2	coord: 131..189 e-value: 6.06576E-5 score: 37.4315
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 130..191

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0001792.1	Tan0001792.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding