Tan0001664 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTGGTAGCCTCCAATTCCTTTTCGTCTGCTCCACTTCTCGAAACCGCCATAACTGACCGCTTTCCTCCACCTCCTCTCCCTCTTTATATACCAAATTCCAAATTCCAAATCCCCAAAATCAAATTTCATTTTTCCCTCTCTCTCTCTTCTCTCTCATGGCTTCCTCAACATTCTGCTACTCTGTTTTCATTTTCATGGCGCTCATACTGATCCTCGCCTCTGCAGAATCCGGCGACAAGCAGCATCAGCCTTGCGACGAGATCTACGTCGTCAAAGAAGGCGAGTCGCTGCACACGATCAGCGCCAAGTGCGGCGATCCCTTCATAATCGACGAGAATCCGCAGATTCAAGACTCCGATGATGTTTTCCCTGGACTTGTGATTAAAATTACGCCAACCATGAACTCCAGGAAGTTGTTATTCAGGTGAGGAGATGTAGCTAGCTAGCCGAATTCCCGT GTGGTAGCCTCCAATTCCTTTTCGTCTGCTCCACTTCTCGAAACCGCCATAACTGACCGCTTTCCTCCACCTCCTCTCCCTCTTTATATACCAAATTCCAAATTCCAAATCCCCAAAATCAAATTTCATTTTTCCCTCTCTCTCTCTTCTCTCTCATGGCTTCCTCAACATTCTGCTACTCTGTTTTCATTTTCATGGCGCTCATACTGATCCTCGCCTCTGCAGAATCCGGCGACAAGCAGCATCAGCCTTGCGACGAGATCTACGTCGTCAAAGAAGGCGAGTCGCTGCACACGATCAGCGCCAAGTGCGGCGATCCCTTCATAATCGACGAGAATCCGCAGATTCAAGACTCCGATGATGTTTTCCCTGGACTTGTGATTAAAATTACGCCAACCATGAACTCCAGGAAGTTGTTATTCAGGTGAGGAGATGTAGCTAGCTAGCCGAATTCCCGT ATGGCTTCCTCAACATTCTGCTACTCTGTTTTCATTTTCATGGCGCTCATACTGATCCTCGCCTCTGCAGAATCCGGCGACAAGCAGCATCAGCCTTGCGACGAGATCTACGTCGTCAAAGAAGGCGAGTCGCTGCACACGATCAGCGCCAAGTGCGGCGATCCCTTCATAATCGACGAGAATCCGCAGATTCAAGACTCCGATGATGTTTTCCCTGGACTTGTGATTAAAATTACGCCAACCATGAACTCCAGGAAGTTGTTATTCAGGTGA MASSTFCYSVFIFMALILILASAESGDKQHQPCDEIYVVKEGESLHTISAKCGDPFIIDENPQIQDSDDVFPGLVIKITPTMNSRKLLFR Homology
BLAST of Tan0001664 vs. NCBI nr
Match: XP_022959284.1 (uncharacterized protein LOC111460313 [Cucurbita moschata]) HSP 1 Score: 136.0 bits (341), Expect = 1.6e-28 Identity = 70/90 (77.78%), Postives = 80/90 (88.89%), Query Frame = 0
BLAST of Tan0001664 vs. NCBI nr
Match: KAG7013356.1 (hypothetical protein SDJN02_23520, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 136.0 bits (341), Expect = 1.6e-28 Identity = 70/90 (77.78%), Postives = 80/90 (88.89%), Query Frame = 0
BLAST of Tan0001664 vs. NCBI nr
Match: XP_023006696.1 (uncharacterized protein LOC111499354 [Cucurbita maxima]) HSP 1 Score: 135.6 bits (340), Expect = 2.2e-28 Identity = 69/90 (76.67%), Postives = 79/90 (87.78%), Query Frame = 0
BLAST of Tan0001664 vs. NCBI nr
Match: KAG6574776.1 (hypothetical protein SDJN03_25415, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 133.7 bits (335), Expect = 8.2e-28 Identity = 69/90 (76.67%), Postives = 79/90 (87.78%), Query Frame = 0
BLAST of Tan0001664 vs. NCBI nr
Match: KGN46208.1 (hypothetical protein Csa_005039 [Cucumis sativus]) HSP 1 Score: 119.0 bits (297), Expect = 2.1e-23 Identity = 61/83 (73.49%), Postives = 73/83 (87.95%), Query Frame = 0
BLAST of Tan0001664 vs. ExPASy TrEMBL
Match: A0A6J1H7L7 (uncharacterized protein LOC111460313 OS=Cucurbita moschata OX=3662 GN=LOC111460313 PE=4 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 8.0e-29 Identity = 70/90 (77.78%), Postives = 80/90 (88.89%), Query Frame = 0
BLAST of Tan0001664 vs. ExPASy TrEMBL
Match: A0A6J1KYG6 (uncharacterized protein LOC111499354 OS=Cucurbita maxima OX=3661 GN=LOC111499354 PE=4 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 1.0e-28 Identity = 69/90 (76.67%), Postives = 79/90 (87.78%), Query Frame = 0
BLAST of Tan0001664 vs. ExPASy TrEMBL
Match: A0A0A0K9P3 (LysM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G074605 PE=4 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 1.0e-23 Identity = 61/83 (73.49%), Postives = 73/83 (87.95%), Query Frame = 0
BLAST of Tan0001664 vs. ExPASy TrEMBL
Match: A0A5D3DLK6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00150 PE=4 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 2.5e-22 Identity = 60/83 (72.29%), Postives = 72/83 (86.75%), Query Frame = 0
BLAST of Tan0001664 vs. ExPASy TrEMBL
Match: A0A6A1W7P5 (LysM domain-containing protein OS=Morella rubra OX=262757 GN=CJ030_MR2G005656 PE=4 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 1.5e-19 Identity = 51/94 (54.26%), Postives = 68/94 (72.34%), Query Frame = 0
BLAST of Tan0001664 vs. TAIR 10
Match: AT5G62150.1 (peptidoglycan-binding LysM domain-containing protein ) HSP 1 Score: 92.0 bits (227), Expect = 2.5e-19 Identity = 46/92 (50.00%), Postives = 61/92 (66.30%), Query Frame = 0
BLAST of Tan0001664 vs. TAIR 10
Match: AT3G52790.1 (peptidoglycan-binding LysM domain-containing protein ) HSP 1 Score: 81.3 bits (199), Expect = 4.5e-16 Identity = 34/50 (68.00%), Postives = 43/50 (86.00%), Query Frame = 0
BLAST of Tan0001664 vs. TAIR 10
Match: AT4G25433.1 (peptidoglycan-binding LysM domain-containing protein ) HSP 1 Score: 79.7 bits (195), Expect = 1.3e-15 Identity = 32/48 (66.67%), Postives = 42/48 (87.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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