Tan0001505 (gene) Snake gourd v1

Overview
NameTan0001505
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionTransposon Ty3-I Gag-Pol polyprotein
LocationLG04: 43916902 .. 43925733 (-)
RNA-Seq ExpressionTan0001505
SyntenyTan0001505
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTGGATTACCTCATTTGTACTAATTACAGTGGGTCGCATCCATGGTGATGTGAATCAAACCATTGATCCATTGCATGTACCTGAAGGAGCAATAACAAGGAGCAAGGCCAAGAAGATTCAACAGGCTTTCACATTGCATCTCCAAAAACTCGTGAATGCACAAGGAGAAACCAAGATTTTTGAGCCCAAAATTCTTTATAATGTTAGTACAACAAGTCAAGATGAGAATGGAGTGAAGATGGCACGGGAAAAGTTGTCTAGTTTGAAAGATGGCACGAAGGACAAAAAAAGTGTGCAGAAAATGTGAACAGGTGGCTGTCTAGATTGCACCTCTTGGGATTTCGTGATGTCAAACCTCGTCAAACGAAATAGTCATGCATGGCGGATCCTACAATAGATAATTAAGACTATTTAAAGCATTTCTATGTTTTTTGTTCCATATTTAGAGCTCTCAAACGTTGTGCAATCAAGTTTTAAATTCCTAGGTCAATTTTTTCTTCATTTCACATTTAATGCTTTTTAAAGACTTTTGGTCTTTGGTGCTTTGCACGACCATTTTGGCCTATTTAAAGGCTTGTATTGGCATGGAAAAGGCAGAACCTTTATGAAAAAACTTGTGTTTTGTTTAGCCCCATTTGGTGTTAACTTTCTTTCAAATCTTGCTTTAGGTTTGATGTTTAACCGATTCATTGGATTAGCCCGATCAAGCTAATTGGAGGTGAGTCGTCTTAGGATCTAGGAGTGACCATCCTTATTCTAAGTTTGATCTAAGAGTGATTCATCTTCTAACTTAACTCTTAGTTGGAATCAATTCGTTAAGTTAGCCTTGTTCGTGACGTTTGCAAAGATCCTAGAAGGACCTCTAGCTTTGTTGAACCAACAAATTAGTAGCTTATCATTTGGTATCGAGCTCGTTGGTCGACATCCTTTGGCCGACTCTCTAGAGGTGAAATATCTTCAATTTGCTTTACTTTATTTTCTTTCATTTTTTTATCATTTACAAAGTTTAATACAAGACATCCTACAACTTTTCTTCCATTTTTTGTGTTTAGTTCTTGGATAAAAAAAACAGATGTAAAAAGTGAAAAAAAAGGTAGCAAAAAAGTGAAAAAAAAGCGAGAGCAAAAAGTGAAAAAAAAAATTGTTCAAGGATCCAAGACACACAAAAGTTCTCGATTTTAAATTTTATTTTCTCAAAACTTTGAGTTGTAGATCCTTAGGATGAGTTTCTCTAGTCTTAGCTTGTGAAAGGTTATCATTGATTTAGTTTTATATCAAGTTGAAAAGCAAGGTTGCACCAAATTTTTAAACCAACCCTTACATCTTTGACCTAGTACCAAAAGCCTACCCTTGAGTGATAAACACGAGTGTCCTTGAGTGATATCTTGGTGAGAAGTGTGGAGAGGTCCTTATAAAAAAAAATGTCACAAGATAATAAAGAAAAAGTTCCGCAAGTGGTAGATCCAAATATGACTATTCTTCAAGCAATTCAAGGTATGATAGAGATGATGAGAGAAGAAAGGGAAGAAAGGAGAGCACAACAACAAAGAGAAGAACGGATCTTGCAAGAAGATGAAGGCATGTTTGATTTACAGGTACAAGAAAGAAACTTAGGAGGAAGAGGAAATGTGAGGGGAAGAGGAAGAAATAACGTTGCAAACATTGTGCAACCTAGAAGAGCGGAAAGAGTGAATGAAGAAAGGGATAGCGGAGTGAAACTCGAGAATTCCACCCTTTAGTGAGTGCAGCGGACTCAGAGGCATACTTGCAATGGGAAAGAAAAATAGAACATGTATTTGATTGTAATACATATAGTGAGAATAAGAAGATGAAACTTGTCATTGCCGAATTCACCAATCATGCGGGAGAATGGTATCAACATCTCAAATCCGAGAGAAGAAGGAAAGAGGAAGATCCAATAGAAACTTGGGAAGAACTTAAAGAAGCCATGAGAAAGAGGTATGTTCCAAAACATTATGAAAGGGATTTGAAGACTAAATTGCAATCTTTGAGACAGGGAACAAAAAGTGTTGCTGAATATTATCAAGAGATGGAGTCCTTGATGGAAAGAGCAAAAATTCGAGAAGAAGAGGAAGACACCATGTCTCGATTCCTTGGAGGTTTGAATCGAGAAATTACTCATCCGGTTGATAGAAATCCACCACCTTACCTTGAAGATGTGTATCATTATGCTATCAAAATTGAAGCTCAATTGAAGGAAGAAATGGAGCATTCAAAAAGGTATACACCTAAAGCTAGTACCTTTTCAAACTCTAATGCATGGAACAAGGATAGTTTTGTGAATAGGAATGAACCGACACAACAAAGAAGCAAGTTTGTTGCTGCCAAAAGAGTGGAGGCCGAAAGCTCCAATGCTAAAAAGAATGAAGCTTCAAAGGAGGTAAGGGAAAAGTCTAGTTCTATTCAATGTTGGAAGTGCAAAGGGTTTGGACACATGAGCAAAGAATGTGTCAATAAAAGAGTTATGGTGATAAGAAATGGTGTAGTTGATTCGGAGGATGAATGTGAGGAGCATGATGCCCCATTTGAGGAAGAATCAAATATGTGATGATGAGTATGTTGAAGAAGGTAACTCCATATCGTTGATCACAAGGAGGGTCCTTAGTATGCAAATCAAGGAAGACAAAGTTGAAGACCAAAGGAAAACTTGTTTCACACAAGATGCCTAATTAAAGGAAGTCCATGCGGTTTGGTGATTGATAGTGGGAGTTGCACAAATGTGGTAAGTAGTTTTCTTGTAAAGAGACTTCAACTTACTACCCGTCCACATCCAAAGCCATACAAACTTCAATGGTTGACAAACAAAGAGAACTTAAGGTAAATTCTCAAGTTCTTATTCCTTTTACTTTGGGAAGATATAAGGATGAAGTACTTTGTGATGTTTTACCTATGCATGCGGGGATATATTGTTAGGCCGACCTTGGTAATATGATAGAGAGGTCACATTTGATGGAGTGAAAAATAAGTATTCGTTTACCTTCAACGGGAAGAAATTTACTTTACTTCCATTGTCTCCATATGAAGTACATTGTGATCATTTGAAATTAGAGAAGAAAAGAAAAGAGTTTGAAGAACAAGAGAGGAGAGAAGAAAGTAAGTTATAAGAAAAGAAAAGAGTGAAAAGAAAGAGAGAAGTGAGGGGCAAAAGGTGAGTGAAAACCAAGAGAGAAAAAGAGTGATTTTGAGGAAAAAAAAGAAAGAATGTGAGTTTGGTTATAAGAAAGGGGAAGTGAGGAATGTGTTGTTGACACAACAACCAAAATTTGTACTTATGTGCAAAGGGATGTGTTTAACAACTAACCCAAAATCTAATGATGTTTTGCCAAGTTCTTTTAAGTCTCTTTGCAGAAATTTAATGATATGTTTCCACATGAAGATGCACCACGGATTTACCTCCTTTAAGAGGGATTGAACATCAAATTGACTTCATACCAGGGCAACTCTTCCAAACATGGCAGCTTATAGGACCAATCCAACCGAGACTAAGGAGATTGAAAGGCAAGTAGAAGAACTCATGGATAAAGGTTATGTTAGAGAAAGCATGAGTCCTTGCTCGCTCCGTGATTTTGGTACCCAAGAAGGATGGCACATGGAGAATGTGTGTTGATTGTCGAGCCATCAACAAGATAAGCGGTAAAGTATCGACATCCCATTCCTAGATTGGATGACATGCTAGATGAATTACATGGTGCTAATCTGTTTTCAAAAATAGATCTTAAAAGTGGTTATCATCAAATTCGAATGCATGTGGGAGATGAGTGGAAAACGGCTTTCAAAACAAAATTTGGACTTTATGAGTGGCTTGTTATGCCATTTGGCCTTACTAATGCACCAAGTACTTTTATGAGGCTAATGAATCATGTGTTGAGAGAGTACATTGGAAAATTTGTTGTTGTGTACTTTGATGATATTCTTGTTTACTCAAAAAGCTTGGTTTATTAAGAATTTCAGTAGTATAGCCTCACCATTAAATGAACTTGTCAAAAAGCATGTGAAATTTGAATGGACAGAAAAACAAGAAGATGCATTCAATGAATTAAAAGATAAATTGACCAATGCACCTTGTCTTGCTTTACCTAACTTTGACAAATCTTTTGAGATTGAATGTGATGCGGCGGGATAGGTATAGGAGCTGTTTTGATGCAAGAAAAGAGGCCAATCATGTTCTTTAGTGAGAAGCTAAATGGAGCACAACTCAACTACTCGACATATGACAAAGAATCGCATGCACTTGTGAGGACTTTGCAAGTTTGGCAACATTACTTGTGGCCAAAAGAGTTTGTCATCCACACTGATCATGAAAGTTTGAAGCACCTCAAAAGCCAAACAAAGCTAAATAGGAGGCATGCGAAATGGGTAGAGTTCATTGAGACATTTCCTTATGTCATTCATTACAAAAAAAGGTAAGGATAATGTGGTGGCGATGCATTATCAAGAAGGTATGCATTATTTTTCGCCCTTAGTGCAAAGATTCTTGGTTTTAAACATATGATTGAGCTTTACAAAGTTGAGAAATCTGAATTTCATGATGTGTATATGCAATGTTTAGGAGGAAACAACGTACATGATCATGTTGTATTTGATGGTATGCTTTTTAGGAAGGGTAAACTTTGCATTCCTAAGTGTTCTATTCGAGAGTTACTTGTGAAGGAAGCTCATGGGGGAGGTCTTATGGGATATTTTGGGGAGTTTAAAACATACAACATGTTGTGTGAACACTTTTACTGGTTGAAAATGAGGAAGGATGTGAATAAAGTGTGCAAGCAATGTTTCAAATGTAAGGAAGCTAAGTCTAAAACACAACCACATGGACTTTATACACCTTTAGATGTTCCTAGTGAACCATGGGTTGACATTAGCATGGATTTTGTTCTAGGATTGCCAAAGACTAGGAGACATCATGATAGCATTTTTGTGGTGGTTGATAAGTTTAGTAAAATGGCACATTTCATTCCATGTAACAAAACAGATGAGGCAACTAATATAGCTAATCTATTCTTTAGGGAAGTGGTTAGATTGCATGGCATTCCAAAAACCATTGTAAGTGATAGAGATGCCAAATTTTTAAGTCATTTTTGGAAAGTTTTGTGGGGTAAATTGGGAACTAAGCTTTTGTTTTCTACAACTTGTGTCACACCCCCTCCCGAACCACATGCTAACTTAGCCCGGGAGACGGCATGAAGCCAATGAGACATTGTTACCTCTTAACAATACTCTTGACATTACTTTACTCGAAACAAACTATGTTCGCATATGGAACACTTTAAACTTAACACAATGGAATCGGACATCTATAAGACGTACATGAGGAGAAACTCTTCTTAAGTCTCTCTTGGAAACTAAGATGAGCTAGAACATCGAGAACCACAAGCAAACCCAAACCACTAATTAAGCAACCACAACCTCTAAAGCACATACGACTATAACTACATAGTTCTCTTAAAATAATTAAAGACATATGGACTTGCTAAACCACACCAACCACGTACAACATATCAAACATGAGAAGCTTCCAGCAGACTATGGCAAAGTTATCGTGCACCGGAGCTCGATCTCTACACGAAAAGTGGGAAAAACATCGAAGAATGAGCTATAAAGCTCGGTGAGTGACTTGAGTTTGAAAGAAAGCTATTAACTCGTAAATCATATCACTGGCCATCTATGAGCATATGCATCCGTAATCAAGCGTTAAAAGTAATCGTGTAATCATTATAGCTTTTCATGAAAACAAGCAAGACACCGTTAAAATCTCGTAAGGCATGTAAATGATATAAACTCTTTTTAAAACATGTCACATCCACGTTGTGTAGGGCACGCCGAAGACACCAACGTTTATTCTACGATGTAGTGGGGCCCGCCAAAGACTCACGGCAATATTTGTTGTCACGGAGTACACTCAACGTCGACAACGAGAATAAGACTGTGTGCACACGGTACTACATAGCCTCGGGCTCAATATCTCGAGAAGATCACATGAAAACATTTGAACATGCCAGCTTATCTTTTTCTTTCATAAAACTCAAGCTTACTTAGCTTGTTCATAAAACTAGAAATCTTTAAAACATACTTGCTAGTACATGCTTGCTTGAAATCATCATATTTTCATAAGTTTTGGCAACCATTGGACATATGCTCATGTATAAACTTTATAAAGACTTTTAGGCTCATCATGAACACTTTAAAACATTTCTAAGAAATCATGAATGCTTATAAACAAGTGTTCAAGAAATCAATAAACATCTAAACCATTTCGTTTTAGCAAAACCTTGCATTTCATAAGCATAATACAAGCCTATAAACCATTTTCAGGGTTCGTTTTGTCACTCACAGTGTTAGAACTAGAGTCGTGACCCGTACACTCGACTTATTTGCTCTTGGCCTGTCAAACAAACCAAATTCAACCATTAGAACCTCGAGCTCATGCTTTTTAACCTTAAACTTACAAGAAAACACACTTTCAAAAATTCCAGCATTTAACAGATTTTATGCCCTGTATTCAGATACTCATAACTTCTTCATTACTTATCCACAAATAATGTACTTTATACCAAACTCTTCCTTTTGGAACCCTCTAAAACTCTTATGAAGACATGAAAATGAGATTCCCAATAGATTGGTTCAGAAATACCTCGAAAGCTTCTTTCCCCGGAACCAACTTCTGCTATTCCAGATTCGAATTTCTGCTGCAACCCGAAACTTGACCTGCTATTTACAACATCTTCCAATCATTTTCTATTCACGATTTCTTCATGCAAGTTGTAGGAAATTCAATAAGCTTTCCAACCATACCTAATAGAGCTTCTGATTCCAATTCTACAGGTCAGTACAACCAAAACATCAGAGACTTCTCGGATTTGACAGTAAATTCTGTGTTCTGACTTCCTCTTCACAAATCAGTAGCTTAAGATCCGAATTTGCTCGAGCATTCTTCACGAATTTTGTTCCAATATGAGTTAACTTGCACGAAACAAAATTTCAGCTCTTACCTCTTTCTGTGGAGCTCGTGATGAACAAAAGAGCAGAACATGGCAGAGTGATTACCTTGCTGTCATAAAGAATCCTCTTGAGTTCTTCTCCTTTCTTCTGCAACTACAGCTCCAAATTTATGAAAAATGGCTTCCTTCTTCTTCCTTTCTCCTTCTCCCATGAAATATCAGCTTGGTTTGTGATGAAAGAGAAGAAATTGAAGACAAAACCCTTTTTAAAACAATACAATCGGTGGAAAGAGGTGGTTTTGTCTTTTTCCCCTTTTTCTCTTTTTCTTTTTCCTTTTCTTTTTCATTCCTTTATCCCTTCCTTCCATTTCTTTTCTTTTCTTTTCTTTTCTTAACAAAACAAAGCAAACTTAGTATATTAAACATTTGTTTCATTTCCTTTTCTTCTTTTGTCTTAAAAGCAATCCAAACCAAAATGGTTTAAACTTTCCTTCCTTATTTTCCTTTTGCCTTTCACTTCATTTCTTTCCTTTTTAAAACATGGGAAACCAAGTTTTAAACATTCATTTCTTCTTTCTTTTTGTTGTTTGATAATATGGAGGTTCCAAAGAAAGATCTTGGGTTTACAACTTGTCACCCCCAAACTGATGGGCAAACCGAGGTGGTTAATAGAACTTTAGGGGCATTACTTAGATCGCTAATTTCTAAGAATCTTAAGTCTTGGGAAGAGACTCTACCTTTTGTGGAGTTTGCATACAATAGAGCGATACATAGCACCACTCATTGTTCACCTTTTGAGGTTGTGTATGGATTTAATCCCTTAACTCCTCTAGATTTATCACCTTTACCACCTAATATGTTTTCTAGTGATGCAGCTGTTTCTAAAGCCGAATACATAAAAAATCTGCACAAAGAAGTCAAGGAAAGAATTGAAAAGAAAAATGAAAAGCTAGTCACTCAGAAGAACCAAGGAGAAAGAAATTGATTTTTAAAGTGGGTGAATGGGTGCAGGTTCATCTATTTAAAGGAAAGGTTTCGGACCAAAGGAAGTCTAAACTTCAACCAAGGGAGATGGTCCATTTCAAGTATTAGAGCGGATCAATGAAAATGCATACAAACTAGATCTCCGAGGTGAGTACAATGTAAGTTCTACTTTTAATGTGGCTGATTTGACTCCTTTTGATGTAGGAAATGAAGACGTTGATTTGAGGACAAATCCTTTTAAAGAAAGGGGATGATGTGAATCAAACCATTGATCCATTGCATGTACTGAAGGAGCAATAACAAGGAGCAAGGCCAAGAAGATTCAACAGGCTTTCACATTGCATCTCCAAAAACTCGTGAATGCACAAGGAGAAACCAAGATTTTTGAGCCCAAAATTCTTTATAATGTTAGTACAACAAGTCAAGATGAGAATGGAGTGAAGATGGCACGGGAAAAGTTGTCTAGTTTGAAAGATGGCACGAAGGACAAAAAAAGTGTGCAGAAAATGTGAACAGGTGGCTGTCTAGATTGAACCTCTTGGGATTTCGTGATGTCAAACCTCGTCAAACGAAATAGTCATGCATGGCGGATCCTACAGTAGATAATTAAGACCACTTAAAGCATTTCTATGTTTTTTGTTCCATATTTAGAGCTCTCAAACGTTGTGCAATCAAGTTTTAAATTCCTAGGTCAATTTTTTCTTCATTTCACATTTAATGCTTTTTAAAGACTTTTGGTCTTTGGTGCTTTGCACGACCATTTTGGCCTATTTAAAGGCTTGTATTGGCATGGAAAAGGCAGAACCTTTATGAAAAAAACTTGTGTTTTGTTTAGCCCCATTTGGTGTTAACTTTCTTTCAAATCTTGCTTTAGGTTTGATGTTTAA

mRNA sequence

ATGAGTTGGATTACCTCATTTGTACTAATTACAGTGGGTCGCATCCATGGTGATGTGAATCAAACCATTGATCCATTGCATGTACCTGAAGGAGCAATAACAAGGAGCAAGGCCAAGAAGATTCAACAGGCTTTCACATTGCATCTCCAAAAACTCGTGAATGCACAAGGAGAAACCAAGATTTTTGAGCCCAAAATTCTTTATAATGTTAGTACAACAAGTCAAGATGAGAATGGAGTGAAGATGGCACGGGAAAAGTTGTCTAGTTTGAAAGATGGCACGAAGGACAAAAAAAGTGTGCAGAAAATTAGCTTATCATTTGGTATCGAGCTCGTTGGTCGACATCCTTTGGCCGACTCTCTAGAGGTGAAATATCTTCAATTTGCTTTACTTTATTTTCTTTCATTTTTTTATCATTTACAAAAAAAAGTTCCGCAAGTGGTAGATCCAAATATGACTATTCTTCAAGCAATTCAAGGTATGATAGAGATGATGAGAGAAGAAAGGGAAGAAAGGAGAGCACAACAACAAAGAGAAGAACGGATCTTGCAAGAAGATGAAGGCATGTTTGATTTACAGGTACAAGAAAGAAACTTAGGAGGAAGAGGAAATGCCAAGAAGATTCAACAGGCTTTCACATTGCATCTCCAAAAACTCGTGAATGCACAAGGAGAAACCAAGATTTTTGAGCCCAAAATTCTTTATAATGTTAGTACAACAAGTCAAGATGAGAATGGAGTGAAGATGGCACGGGAAAAGTTGTCTAGTTTGAAAGATGGCACGAAGGACAAAAAAAGTGTGCAGAAAATGTTTGATGTTTAA

Coding sequence (CDS)

ATGAGTTGGATTACCTCATTTGTACTAATTACAGTGGGTCGCATCCATGGTGATGTGAATCAAACCATTGATCCATTGCATGTACCTGAAGGAGCAATAACAAGGAGCAAGGCCAAGAAGATTCAACAGGCTTTCACATTGCATCTCCAAAAACTCGTGAATGCACAAGGAGAAACCAAGATTTTTGAGCCCAAAATTCTTTATAATGTTAGTACAACAAGTCAAGATGAGAATGGAGTGAAGATGGCACGGGAAAAGTTGTCTAGTTTGAAAGATGGCACGAAGGACAAAAAAAGTGTGCAGAAAATTAGCTTATCATTTGGTATCGAGCTCGTTGGTCGACATCCTTTGGCCGACTCTCTAGAGGTGAAATATCTTCAATTTGCTTTACTTTATTTTCTTTCATTTTTTTATCATTTACAAAAAAAAGTTCCGCAAGTGGTAGATCCAAATATGACTATTCTTCAAGCAATTCAAGGTATGATAGAGATGATGAGAGAAGAAAGGGAAGAAAGGAGAGCACAACAACAAAGAGAAGAACGGATCTTGCAAGAAGATGAAGGCATGTTTGATTTACAGGTACAAGAAAGAAACTTAGGAGGAAGAGGAAATGCCAAGAAGATTCAACAGGCTTTCACATTGCATCTCCAAAAACTCGTGAATGCACAAGGAGAAACCAAGATTTTTGAGCCCAAAATTCTTTATAATGTTAGTACAACAAGTCAAGATGAGAATGGAGTGAAGATGGCACGGGAAAAGTTGTCTAGTTTGAAAGATGGCACGAAGGACAAAAAAAGTGTGCAGAAAATGTTTGATGTTTAA

Protein sequence

MSWITSFVLITVGRIHGDVNQTIDPLHVPEGAITRSKAKKIQQAFTLHLQKLVNAQGETKIFEPKILYNVSTTSQDENGVKMAREKLSSLKDGTKDKKSVQKISLSFGIELVGRHPLADSLEVKYLQFALLYFLSFFYHLQKKVPQVVDPNMTILQAIQGMIEMMREEREERRAQQQREERILQEDEGMFDLQVQERNLGGRGNAKKIQQAFTLHLQKLVNAQGETKIFEPKILYNVSTTSQDENGVKMAREKLSSLKDGTKDKKSVQKMFDV
Homology
[Close]
BLAST of Tan0001505 vs. NCBI nr
Match: TYK02449.1 (F15O4.13 [Cucumis melo var. makuwa])

HSP 1 Score: 114.4 bits (285), Expect = 1.6e-21
Identity = 58/86 (67.44%), Postives = 72/86 (83.72%), Query Frame = 0 

Query: 18   DVNQTIDPLHVPEGAITRSKAKKIQQAFTLHLQKLVNAQGETKIFEPKILYNVSTTSQDE 77
            DV+   + LHVPEG IT+ KAKKIQ+AFTLH+QKL NAQ ETK FE K LYNVS+ SQ+E
Sbjct: 1419 DVDSLNNLLHVPEGPITKRKAKKIQEAFTLHVQKLANAQRETKNFELKFLYNVSSASQEE 1478

Query: 78   NGVKMAREKLSSLKDGTKDKKSVQKI 104
            +GVKMAREKL +L+DGT+++KSVQ +
Sbjct: 1479 HGVKMAREKLCNLEDGTRNEKSVQNL 1504

[Close]
BLAST of Tan0001505 vs. NCBI nr
Match: TYK08102.1 (Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 112.5 bits (280), Expect = 5.9e-21
Identity = 61/104 (58.65%), Postives = 76/104 (73.08%), Query Frame = 0 

Query: 18  DVNQTIDPLHVPEGAITRSKAKKIQQAFTLHLQKLVNAQGETKIFEPKILYNVSTTSQDE 77
           DV+   + LHVPEG IT+ KAKKIQ+AFTLH+QKL NAQ ETK FE K LYNVS+ SQ+E
Sbjct: 540 DVDSLNNLLHVPEGPITKRKAKKIQEAFTLHVQKLANAQRETKNFELKFLYNVSSASQEE 599

Query: 78  NGVKMAREKLSSLKDGTKDKKSVQKISLSFGIELVGRHPLADSL 122
           +GVKMAREKL +L+DGT ++K    I   F + ++  HPL   L
Sbjct: 600 HGVKMAREKLCNLEDGTGNEKRETIIDSKFDLRVI--HPLTKLL 641

[Close]
BLAST of Tan0001505 vs. NCBI nr
Match: KAA0051909.1 (Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 111.3 bits (277), Expect = 1.3e-20
Identity = 57/86 (66.28%), Postives = 70/86 (81.40%), Query Frame = 0 

Query: 18  DVNQTIDPLHVPEGAITRSKAKKIQQAFTLHLQKLVNAQGETKIFEPKILYNVSTTSQDE 77
           DV+   + LHVPEG IT+ KAKKIQ+AFTLH+QKL NAQ ETK FE K LYNVS+ SQ+E
Sbjct: 903 DVDSLNNLLHVPEGPITKRKAKKIQEAFTLHVQKLANAQRETKNFELKFLYNVSSASQEE 962

Query: 78  NGVKMAREKLSSLKDGTKDKKSVQKI 104
           +GVKMAREKL + +DGT ++KSVQ +
Sbjct: 963 HGVKMAREKLCNFEDGTGNEKSVQNL 988

[Close]
BLAST of Tan0001505 vs. NCBI nr
Match: KAA0067206.1 (hypothetical protein E6C27_scaffold418G00080 [Cucumis melo var. makuwa])

HSP 1 Score: 110.2 bits (274), Expect = 2.9e-20
Identity = 57/86 (66.28%), Postives = 69/86 (80.23%), Query Frame = 0 

Query: 18  DVNQTIDPLHVPEGAITRSKAKKIQQAFTLHLQKLVNAQGETKIFEPKILYNVSTTSQDE 77
           DV+   + LHVPEG IT+ KAKKIQ+AFTLH+QKL NAQ E K FEPK LYNVS+ SQ+E
Sbjct: 275 DVDSINNLLHVPEGPITKRKAKKIQEAFTLHVQKLENAQREIKNFEPKFLYNVSSASQEE 334

Query: 78  NGVKMAREKLSSLKDGTKDKKSVQKI 104
           + +KMA EKL SL+DGT D+KSVQ +
Sbjct: 335 HEIKMAWEKLCSLEDGTGDEKSVQNL 360

[Close]
BLAST of Tan0001505 vs. NCBI nr
Match: KAA0063387.1 (Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 110.2 bits (274), Expect = 2.9e-20
Identity = 59/104 (56.73%), Postives = 76/104 (73.08%), Query Frame = 0 

Query: 18  DVNQTIDPLHVPEGAITRSKAKKIQQAFTLHLQKLVNAQGETKIFEPKILYNVSTTSQDE 77
           DV+   + LHVPEG IT+ KAKKIQ+AFT+H+QKL NAQ ETK FE K LYNVS+ SQ+E
Sbjct: 600 DVDSLNNLLHVPEGPITKRKAKKIQEAFTMHVQKLANAQRETKNFELKFLYNVSSASQEE 659

Query: 78  NGVKMAREKLSSLKDGTKDKKSVQKISLSFGIELVGRHPLADSL 122
           +GVKMAREKL +L+D T+++K    I   F + ++  HPL   L
Sbjct: 660 HGVKMAREKLCNLEDDTENEKRETIIDSKFDLRVI--HPLTKLL 701

[Close]
BLAST of Tan0001505 vs. ExPASy TrEMBL
Match: A0A5D3BWE8 (F15O4.13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1738G00600 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 7.5e-22
Identity = 58/86 (67.44%), Postives = 72/86 (83.72%), Query Frame = 0 

Query: 18   DVNQTIDPLHVPEGAITRSKAKKIQQAFTLHLQKLVNAQGETKIFEPKILYNVSTTSQDE 77
            DV+   + LHVPEG IT+ KAKKIQ+AFTLH+QKL NAQ ETK FE K LYNVS+ SQ+E
Sbjct: 1419 DVDSLNNLLHVPEGPITKRKAKKIQEAFTLHVQKLANAQRETKNFELKFLYNVSSASQEE 1478

Query: 78   NGVKMAREKLSSLKDGTKDKKSVQKI 104
            +GVKMAREKL +L+DGT+++KSVQ +
Sbjct: 1479 HGVKMAREKLCNLEDGTRNEKSVQNL 1504

[Close]
BLAST of Tan0001505 vs. ExPASy TrEMBL
Match: A0A5D3C9X5 (Transposon Ty3-I Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G002630 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 2.9e-21
Identity = 61/104 (58.65%), Postives = 76/104 (73.08%), Query Frame = 0 

Query: 18  DVNQTIDPLHVPEGAITRSKAKKIQQAFTLHLQKLVNAQGETKIFEPKILYNVSTTSQDE 77
           DV+   + LHVPEG IT+ KAKKIQ+AFTLH+QKL NAQ ETK FE K LYNVS+ SQ+E
Sbjct: 540 DVDSLNNLLHVPEGPITKRKAKKIQEAFTLHVQKLANAQRETKNFELKFLYNVSSASQEE 599

Query: 78  NGVKMAREKLSSLKDGTKDKKSVQKISLSFGIELVGRHPLADSL 122
           +GVKMAREKL +L+DGT ++K    I   F + ++  HPL   L
Sbjct: 600 HGVKMAREKLCNLEDGTGNEKRETIIDSKFDLRVI--HPLTKLL 641

[Close]
BLAST of Tan0001505 vs. ExPASy TrEMBL
Match: A0A5A7UEI2 (Transposon Ty3-I Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G003620 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 6.4e-21
Identity = 57/86 (66.28%), Postives = 70/86 (81.40%), Query Frame = 0 

Query: 18  DVNQTIDPLHVPEGAITRSKAKKIQQAFTLHLQKLVNAQGETKIFEPKILYNVSTTSQDE 77
           DV+   + LHVPEG IT+ KAKKIQ+AFTLH+QKL NAQ ETK FE K LYNVS+ SQ+E
Sbjct: 903 DVDSLNNLLHVPEGPITKRKAKKIQEAFTLHVQKLANAQRETKNFELKFLYNVSSASQEE 962

Query: 78  NGVKMAREKLSSLKDGTKDKKSVQKI 104
           +GVKMAREKL + +DGT ++KSVQ +
Sbjct: 963 HGVKMAREKLCNFEDGTGNEKSVQNL 988

[Close]
BLAST of Tan0001505 vs. ExPASy TrEMBL
Match: A0A5A7VL78 (RT_RNaseH_2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold418G00080 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.4e-20
Identity = 57/86 (66.28%), Postives = 69/86 (80.23%), Query Frame = 0 

Query: 18  DVNQTIDPLHVPEGAITRSKAKKIQQAFTLHLQKLVNAQGETKIFEPKILYNVSTTSQDE 77
           DV+   + LHVPEG IT+ KAKKIQ+AFTLH+QKL NAQ E K FEPK LYNVS+ SQ+E
Sbjct: 275 DVDSINNLLHVPEGPITKRKAKKIQEAFTLHVQKLENAQREIKNFEPKFLYNVSSASQEE 334

Query: 78  NGVKMAREKLSSLKDGTKDKKSVQKI 104
           + +KMA EKL SL+DGT D+KSVQ +
Sbjct: 335 HEIKMAWEKLCSLEDGTGDEKSVQNL 360

[Close]
BLAST of Tan0001505 vs. ExPASy TrEMBL
Match: A0A5A7V8R2 (Transposon Ty3-I Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold508G00160 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.4e-20
Identity = 59/104 (56.73%), Postives = 76/104 (73.08%), Query Frame = 0 

Query: 18  DVNQTIDPLHVPEGAITRSKAKKIQQAFTLHLQKLVNAQGETKIFEPKILYNVSTTSQDE 77
           DV+   + LHVPEG IT+ KAKKIQ+AFT+H+QKL NAQ ETK FE K LYNVS+ SQ+E
Sbjct: 600 DVDSLNNLLHVPEGPITKRKAKKIQEAFTMHVQKLANAQRETKNFELKFLYNVSSASQEE 659

Query: 78  NGVKMAREKLSSLKDGTKDKKSVQKISLSFGIELVGRHPLADSL 122
           +GVKMAREKL +L+D T+++K    I   F + ++  HPL   L
Sbjct: 660 HGVKMAREKLCNLEDDTENEKRETIIDSKFDLRVI--HPLTKLL 701

The following BLAST results are available for this feature:
BLAST of Tan0001505 vs.
Match NameE-valueIdentityDescription
BLAST of Tan0001505 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK02449.11.6e-2167.44F15O4.13 [Cucumis melo var. makuwa][more]
TYK08102.15.9e-2158.65Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa][more]
KAA0051909.11.3e-2066.28Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa][more]
KAA0067206.12.9e-2066.28hypothetical protein E6C27_scaffold418G00080 [Cucumis melo var. makuwa][more]
KAA0063387.12.9e-2056.73Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa][more]
BLAST of Tan0001505 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BWE87.5e-2267.44F15O4.13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1738G00600 PE=4... [more]
A0A5D3C9X52.9e-2158.65Transposon Ty3-I Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A5A7UEI26.4e-2166.28Transposon Ty3-I Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A5A7VL781.4e-2066.28RT_RNaseH_2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
A0A5A7V8R21.4e-2056.73Transposon Ty3-I Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
BLAST of Tan0001505 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 158..187

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0001505.1Tan0001505.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
biological_process GO:0006508 proteolysis
biological_process GO:0006278 RNA-dependent DNA biosynthetic process
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008233 peptidase activity
molecular_function GO:0003964 RNA-directed DNA polymerase activity
molecular_function GO:0008270 zinc ion binding