Tan0001294 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGTACATTACCTCCTGGGATGAATTCGTCGAGCGTTCTGTGCAATTGTTCCGTTCCGATCCCAATTCCGTAAGTTATAACTTCGAATTCCGATTCCCTAGGTATCGTTTTTCTGTTTGAATGCTGAGAAACTAACATCACTGATGAGAAAATAGATCGCGTCGTTGTATTGTTATTCTCTAGCCTTTTTAACTGTTGAATTACGTGAAACTGAGCAAATCAGCCCCGAGGACTTGAATGATATGAATTGGAGCATAATGAATTGTGCAGGGCGTTCTAATTTATCTATCTGACTAACTTGGTTTCTGTTAACATTATCTGCGATTGCGAACTTACAGTTTGCTCGTATGTTCCGTTTATTGCAACTTTCGTCGTATTTTGATTCATTCTAAATGCGACCACTGTTTTCTTTCAATCCTATTGGAAATTTAGACGCGGTACAACGTAAAGTATCGACACTGCGATGGGAAGCTGGTTCTTAAGGTCACCGATAACCGTGAGGTAAGGAATTGTTTGTTAGATCATTGATTAACATCTCGTGTTCTTATGATTAGTGATCAGGATGCCAATTCTGATTATTGATTTCCAACTAAATGCATGGGTCTATGGTTAATGTGGCATAATTTTAGCCGTATGAATATTATATGCCAATGTTTGAAGATGCGTGTTGAGTCTTTGATGCATGTGTATCCAAGCAGACTTGTGATCAAGTTTTCGTTCTGTATATGCTTCTCCGCTTTATTCTTCTGTAAACTGTCGAGTAGACAGCAAGTGAATTCAATGCCTGTTAAATTGGACGCCACCGTTTTATGCAACTACAAACCAACTAGCAGTTTAGAAATCAGGTCTTATACCTTGTCGCTAATCCGAACAAAAACTTTCACAGACTGTTTTAGTTTCTTTTATTATATTGACCGAAGAGATATTTCATAATCATTCTAACGGAAGATTAGGATGTGGGAGTGTTTGTTACCATGTTAAGAGTGGTTTTCTTTTCTTTCTCACGTGGAAAATTGGAAACTAATTCGGGCGAGGTACATGGGTGCAAGATATCAACTAAGAATAGGATAAGTGAAATTCATATATTGATGCCTGCTTGTATGGGGAATTTACTGTTTGTGTGCAACATACCCTCGTGGTAAACTGAGACAAGTCAATGATCTTGTATTGAAACGAACACTATGGAAGTTAACCAATTGGCACAAGGGCGTATGTCAAATCATAACAATATCATTATCGGAATAGTAGTTCTTATCTTTTTAGACGTGTGAGGTCTACTAATTTTCTCCTTTTTTTCCTTCCTTCTGTTTTCTTCCTGTTCGCTAGTGTCTTAAGTTCAAGACTGACCAGGCACAGGACGTCAAGAAGATGGAAAAACTCAATAACATATTCTTCACTCTGATGGCCCGGGGCCCTGATGGTATTTTTCTTCGAATTTGTTGTTAATGGAGGATCTGAATGCTCTGTTGAATAATAAATAACCACTTGCTTTTGACATGATTTTGTACTAAAATTTTATTAAGATTTGAGTCCTTGTTGTCTATATGGATGAATGGAATGAAAGGTATATATTCTCTGATTGCATGAAAGTCCCATATCCTTAAATTTCAGCAACTTGTAAATTAGTTGCATGATAATATCAGTACTTAGCCAACAAGAGCATAACTCAACTGGCATCGAGTATGACTCATGACCAAGAGGTCATGAGTTTGAATCCCCCCATTCCCAATTGATGTACTAAAATATATATATATATATATATATCAGTACTTGAAGGACGAGTTCACTTCTCCTCTGAATACAGTTTGTGTGAATGAATATAGACCTGCCTGTAACTTTGTTAAATTGGTGAAAATGGTTCAGTGTGCCTGGAGTTCTCACAATCAATGATATAAAAAATGCAACCCTCATTCATGGACCATCTTTCTTTATCCTTTTTTTTTTAATATTATTATTTACCCAGCAATGCTTCAACTTGTAAGTCTAATGTGCACTCAGTTCTACTAGTAGGAATGCTCTTATATTTTTCCTTTCTCTTTTGTGAAGTGGATATATCGGAAGTGACGGGCAAAGAGCAGGTTGATGCACAGCCAACCAAGAAAGGAAGGGGGAGGAAGCAATGA ATGGTGTACATTACCTCCTGGGATGAATTCGTCGAGCGTTCTGTGCAATTGTTCCGTTCCGATCCCAATTCCACGCGGTACAACGTAAAGTATCGACACTGCGATGGGAAGCTGGTTCTTAAGGTCACCGATAACCGTGAGTGTCTTAAGTTCAAGACTGACCAGGCACAGGACGTCAAGAAGATGGAAAAACTCAATAACATATTCTTCACTCTGATGGCCCGGGGCCCTGATGTGGATATATCGGAAGTGACGGGCAAAGAGCAGGTTGATGCACAGCCAACCAAGAAAGGAAGGGGGAGGAAGCAATGA ATGGTGTACATTACCTCCTGGGATGAATTCGTCGAGCGTTCTGTGCAATTGTTCCGTTCCGATCCCAATTCCACGCGGTACAACGTAAAGTATCGACACTGCGATGGGAAGCTGGTTCTTAAGGTCACCGATAACCGTGAGTGTCTTAAGTTCAAGACTGACCAGGCACAGGACGTCAAGAAGATGGAAAAACTCAATAACATATTCTTCACTCTGATGGCCCGGGGCCCTGATGTGGATATATCGGAAGTGACGGGCAAAGAGCAGGTTGATGCACAGCCAACCAAGAAAGGAAGGGGGAGGAAGCAATGA MVYITSWDEFVERSVQLFRSDPNSTRYNVKYRHCDGKLVLKVTDNRECLKFKTDQAQDVKKMEKLNNIFFTLMARGPDVDISEVTGKEQVDAQPTKKGRGRKQ Homology
BLAST of Tan0001294 vs. ExPASy Swiss-Prot
Match: Q9SMU7 (Signal recognition particle 9 kDa protein OS=Arabidopsis thaliana OX=3702 GN=SRP9 PE=3 SV=1) HSP 1 Score: 189.1 bits (479), Expect = 2.5e-47 Identity = 89/103 (86.41%), Postives = 97/103 (94.17%), Query Frame = 0
BLAST of Tan0001294 vs. ExPASy Swiss-Prot
Match: O04438 (Signal recognition particle 9 kDa protein OS=Zea mays OX=4577 GN=SRP9 PE=3 SV=1) HSP 1 Score: 178.7 bits (452), Expect = 3.3e-44 Identity = 84/103 (81.55%), Postives = 93/103 (90.29%), Query Frame = 0
BLAST of Tan0001294 vs. ExPASy Swiss-Prot
Match: Q55GL2 (Signal recognition particle 9 kDa protein OS=Dictyostelium discoideum OX=44689 GN=srp9 PE=3 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 6.5e-16 Identity = 35/71 (49.30%), Postives = 56/71 (78.87%), Query Frame = 0
BLAST of Tan0001294 vs. ExPASy Swiss-Prot
Match: P34642 (Signal recognition particle 9 kDa protein OS=Caenorhabditis elegans OX=6239 GN=ZK512.4 PE=3 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 4.0e-13 Identity = 33/67 (49.25%), Postives = 48/67 (71.64%), Query Frame = 0
BLAST of Tan0001294 vs. ExPASy Swiss-Prot
Match: P49458 (Signal recognition particle 9 kDa protein OS=Homo sapiens OX=9606 GN=SRP9 PE=1 SV=2) HSP 1 Score: 74.3 bits (181), Expect = 8.8e-13 Identity = 34/68 (50.00%), Postives = 47/68 (69.12%), Query Frame = 0
BLAST of Tan0001294 vs. NCBI nr
Match: XP_022146059.1 (signal recognition particle 9 kDa protein isoform X1 [Momordica charantia] >XP_022146061.1 signal recognition particle 9 kDa protein isoform X1 [Momordica charantia]) HSP 1 Score: 209.5 bits (532), Expect = 1.3e-50 Identity = 101/103 (98.06%), Postives = 102/103 (99.03%), Query Frame = 0
BLAST of Tan0001294 vs. NCBI nr
Match: XP_022963515.1 (signal recognition particle 9 kDa protein [Cucurbita moschata] >XP_022963516.1 signal recognition particle 9 kDa protein [Cucurbita moschata] >KAG7011249.1 Signal recognition particle 9 kDa protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 206.8 bits (525), Expect = 8.7e-50 Identity = 100/103 (97.09%), Postives = 101/103 (98.06%), Query Frame = 0
BLAST of Tan0001294 vs. NCBI nr
Match: XP_038887366.1 (signal recognition particle 9 kDa protein [Benincasa hispida] >XP_038887367.1 signal recognition particle 9 kDa protein [Benincasa hispida]) HSP 1 Score: 205.3 bits (521), Expect = 2.5e-49 Identity = 98/103 (95.15%), Postives = 101/103 (98.06%), Query Frame = 0
BLAST of Tan0001294 vs. NCBI nr
Match: KAG6571487.1 (Signal recognition particle 9 kDa protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 205.3 bits (521), Expect = 2.5e-49 Identity = 99/103 (96.12%), Postives = 101/103 (98.06%), Query Frame = 0
BLAST of Tan0001294 vs. NCBI nr
Match: XP_022967500.1 (signal recognition particle 9 kDa protein-like [Cucurbita maxima] >XP_022967501.1 signal recognition particle 9 kDa protein-like [Cucurbita maxima] >XP_022967502.1 signal recognition particle 9 kDa protein-like [Cucurbita maxima] >XP_022967503.1 signal recognition particle 9 kDa protein-like [Cucurbita maxima]) HSP 1 Score: 204.9 bits (520), Expect = 3.3e-49 Identity = 99/103 (96.12%), Postives = 101/103 (98.06%), Query Frame = 0
BLAST of Tan0001294 vs. ExPASy TrEMBL
Match: A0A6J1CY87 (Signal recognition particle 9 kDa protein OS=Momordica charantia OX=3673 GN=LOC111015357 PE=3 SV=1) HSP 1 Score: 209.5 bits (532), Expect = 6.5e-51 Identity = 101/103 (98.06%), Postives = 102/103 (99.03%), Query Frame = 0
BLAST of Tan0001294 vs. ExPASy TrEMBL
Match: A0A6J1HI87 (Signal recognition particle 9 kDa protein OS=Cucurbita moschata OX=3662 GN=LOC111463821 PE=3 SV=1) HSP 1 Score: 206.8 bits (525), Expect = 4.2e-50 Identity = 100/103 (97.09%), Postives = 101/103 (98.06%), Query Frame = 0
BLAST of Tan0001294 vs. ExPASy TrEMBL
Match: A0A6J1HSA1 (Signal recognition particle 9 kDa protein OS=Cucurbita maxima OX=3661 GN=LOC111466989 PE=3 SV=1) HSP 1 Score: 204.9 bits (520), Expect = 1.6e-49 Identity = 99/103 (96.12%), Postives = 101/103 (98.06%), Query Frame = 0
BLAST of Tan0001294 vs. ExPASy TrEMBL
Match: A0A6J1K1A1 (Signal recognition particle 9 kDa protein OS=Cucurbita maxima OX=3661 GN=LOC111490803 PE=3 SV=1) HSP 1 Score: 204.1 bits (518), Expect = 2.7e-49 Identity = 98/103 (95.15%), Postives = 99/103 (96.12%), Query Frame = 0
BLAST of Tan0001294 vs. ExPASy TrEMBL
Match: A0A1S3BLU0 (Signal recognition particle 9 kDa protein OS=Cucumis melo OX=3656 GN=LOC103491251 PE=3 SV=1) HSP 1 Score: 204.1 bits (518), Expect = 2.7e-49 Identity = 98/103 (95.15%), Postives = 100/103 (97.09%), Query Frame = 0
BLAST of Tan0001294 vs. TAIR 10
Match: AT3G49100.1 (Signal recognition particle, SRP9/SRP14 subunit ) HSP 1 Score: 189.1 bits (479), Expect = 1.8e-48 Identity = 89/103 (86.41%), Postives = 97/103 (94.17%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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