Tan0001234 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAAATTTCTCATCCATTTTCGCAAACACTTTCACTTGAGGCAGTAGCACCACCAATCCAAAATGGGATTGATGAAGCTCTGCCTATTTCTCTTCGTCATTGTCGTCGTTGTCACCCCTCATTCTTCTGCTTTTCCTGAAAGCACGAAGGATTGGGCTCGGGCCTACGGTGCTCCAGATTTTGCCTTCTTTGGTGGACTCACACCTGCCGGGATGAGCGAACATGGTCGACATCTACTTTTTCAATACGGATACGACACGACGAAGTACTCTCGTAAGAAGTATTTGAGTTACTATGCACTTAGGAAAAACAACATACCTTGTGGTCGTCGTGGTAGCTCTTACTATGACTGTAGGAAGCGTGAGAGGGTCAACCCTTACCGTCGTGGTTGCAGTGCCTTAACCGGTTGCGCTCGGTTCCTCGATTAA AAAATTTCTCATCCATTTTCGCAAACACTTTCACTTGAGGCAGTAGCACCACCAATCCAAAATGGGATTGATGAAGCTCTGCCTATTTCTCTTCGTCATTGTCGTCGTTGTCACCCCTCATTCTTCTGCTTTTCCTGAAAGCACGAAGGATTGGGCTCGGGCCTACGGTGCTCCAGATTTTGCCTTCTTTGGTGGACTCACACCTGCCGGGATGAGCGAACATGGTCGACATCTACTTTTTCAATACGGATACGACACGACGAAGTACTCTCGTAAGAAGTATTTGAGTTACTATGCACTTAGGAAAAACAACATACCTTGTGGTCGTCGTGGTAGCTCTTACTATGACTGTAGGAAGCGTGAGAGGGTCAACCCTTACCGTCGTGGTTGCAGTGCCTTAACCGGTTGCGCTCGGTTCCTCGATTAA ATGGGATTGATGAAGCTCTGCCTATTTCTCTTCGTCATTGTCGTCGTTGTCACCCCTCATTCTTCTGCTTTTCCTGAAAGCACGAAGGATTGGGCTCGGGCCTACGGTGCTCCAGATTTTGCCTTCTTTGGTGGACTCACACCTGCCGGGATGAGCGAACATGGTCGACATCTACTTTTTCAATACGGATACGACACGACGAAGTACTCTCGTAAGAAGTATTTGAGTTACTATGCACTTAGGAAAAACAACATACCTTGTGGTCGTCGTGGTAGCTCTTACTATGACTGTAGGAAGCGTGAGAGGGTCAACCCTTACCGTCGTGGTTGCAGTGCCTTAACCGGTTGCGCTCGGTTCCTCGATTAA MGLMKLCLFLFVIVVVVTPHSSAFPESTKDWARAYGAPDFAFFGGLTPAGMSEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRGCSALTGCARFLD Homology
BLAST of Tan0001234 vs. ExPASy Swiss-Prot
Match: Q6NME6 (Protein RALF-like 19 OS=Arabidopsis thaliana OX=3702 GN=RALFL19 PE=3 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 5.0e-15 Identity = 34/49 (69.39%), Postives = 41/49 (83.67%), Query Frame = 0
BLAST of Tan0001234 vs. ExPASy Swiss-Prot
Match: Q9FZA0 (Protein RALF-like 4 OS=Arabidopsis thaliana OX=3702 GN=RALFL4 PE=1 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 4.2e-14 Identity = 32/48 (66.67%), Postives = 40/48 (83.33%), Query Frame = 0
BLAST of Tan0001234 vs. ExPASy Swiss-Prot
Match: Q9LUS7 (Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 1.1e-11 Identity = 29/47 (61.70%), Postives = 38/47 (80.85%), Query Frame = 0
BLAST of Tan0001234 vs. ExPASy Swiss-Prot
Match: Q8L9P8 (Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 1.1e-11 Identity = 29/46 (63.04%), Postives = 37/46 (80.43%), Query Frame = 0
BLAST of Tan0001234 vs. ExPASy Swiss-Prot
Match: Q945T0 (Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 3.3e-11 Identity = 28/45 (62.22%), Postives = 37/45 (82.22%), Query Frame = 0
BLAST of Tan0001234 vs. NCBI nr
Match: XP_022925244.1 (protein RALF-like 31 [Cucurbita moschata] >KAG6595448.1 Protein RALF-like 4, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 151.0 bits (380), Expect = 6.7e-33 Identity = 77/122 (63.11%), Postives = 87/122 (71.31%), Query Frame = 0
BLAST of Tan0001234 vs. NCBI nr
Match: XP_038876152.1 (uncharacterized protein LOC120068449 [Benincasa hispida]) HSP 1 Score: 146.7 bits (369), Expect = 1.3e-31 Identity = 72/121 (59.50%), Postives = 87/121 (71.90%), Query Frame = 0
BLAST of Tan0001234 vs. NCBI nr
Match: KAG7027448.1 (Protein RALF-like 4, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 145.6 bits (366), Expect = 2.8e-31 Identity = 74/118 (62.71%), Postives = 84/118 (71.19%), Query Frame = 0
BLAST of Tan0001234 vs. NCBI nr
Match: XP_023531888.1 (protein RALF-like 4 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 144.1 bits (362), Expect = 8.1e-31 Identity = 69/121 (57.02%), Postives = 87/121 (71.90%), Query Frame = 0
BLAST of Tan0001234 vs. NCBI nr
Match: XP_022989015.1 (protein RALF-like 4 [Cucurbita maxima]) HSP 1 Score: 143.7 bits (361), Expect = 1.1e-30 Identity = 68/121 (56.20%), Postives = 87/121 (71.90%), Query Frame = 0
BLAST of Tan0001234 vs. ExPASy TrEMBL
Match: A0A6J1EBL1 (protein RALF-like 31 OS=Cucurbita moschata OX=3662 GN=LOC111432544 PE=3 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 3.2e-33 Identity = 77/122 (63.11%), Postives = 87/122 (71.31%), Query Frame = 0
BLAST of Tan0001234 vs. ExPASy TrEMBL
Match: A0A6J1JL71 (protein RALF-like 4 OS=Cucurbita maxima OX=3661 GN=LOC111486206 PE=3 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 5.2e-31 Identity = 68/121 (56.20%), Postives = 87/121 (71.90%), Query Frame = 0
BLAST of Tan0001234 vs. ExPASy TrEMBL
Match: A0A6J1JN66 (protein RALF-like 4 OS=Cucurbita maxima OX=3661 GN=LOC111486205 PE=3 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 2.0e-30 Identity = 68/121 (56.20%), Postives = 88/121 (72.73%), Query Frame = 0
BLAST of Tan0001234 vs. ExPASy TrEMBL
Match: A0A6J1EIU0 (protein RALF-like 4 OS=Cucurbita moschata OX=3662 GN=LOC111434547 PE=3 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 3.3e-30 Identity = 68/122 (55.74%), Postives = 89/122 (72.95%), Query Frame = 0
BLAST of Tan0001234 vs. ExPASy TrEMBL
Match: A0A6J1EI16 (protein RALF-like 19 OS=Cucurbita moschata OX=3662 GN=LOC111434550 PE=3 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 3.3e-30 Identity = 67/121 (55.37%), Postives = 87/121 (71.90%), Query Frame = 0
BLAST of Tan0001234 vs. TAIR 10
Match: AT2G33775.1 (ralf-like 19 ) HSP 1 Score: 82.0 bits (201), Expect = 3.5e-16 Identity = 34/49 (69.39%), Postives = 41/49 (83.67%), Query Frame = 0
BLAST of Tan0001234 vs. TAIR 10
Match: AT1G28270.1 (ralf-like 4 ) HSP 1 Score: 79.0 bits (193), Expect = 3.0e-15 Identity = 32/48 (66.67%), Postives = 40/48 (83.33%), Query Frame = 0
BLAST of Tan0001234 vs. TAIR 10
Match: AT3G16570.1 (rapid alkalinization factor 23 ) HSP 1 Score: 70.9 bits (172), Expect = 8.2e-13 Identity = 29/47 (61.70%), Postives = 38/47 (80.85%), Query Frame = 0
BLAST of Tan0001234 vs. TAIR 10
Match: AT4G15800.1 (ralf-like 33 ) HSP 1 Score: 70.9 bits (172), Expect = 8.2e-13 Identity = 29/46 (63.04%), Postives = 37/46 (80.43%), Query Frame = 0
BLAST of Tan0001234 vs. TAIR 10
Match: AT3G05490.1 (ralf-like 22 ) HSP 1 Score: 68.9 bits (167), Expect = 3.1e-12 Identity = 38/109 (34.86%), Postives = 61/109 (55.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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