Tan0000472 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCAATTGGGTCTCTTCTTTCAAACCCATCTAGAGAGAGAGAGGTTGTGAAAATGGCGAGACTGATCAGAGAAATTGGTAGTGTTAATGGAAGTTTTGGACTCGCCGGCGACATTTATTTGCTGTTTTGGGCGGCTCTGTTTACACTCTGCATAATCTCAACCATAATTTTCTCTTGCTCCGACGGCATGTCAAAAGAGAGGAATTCCACGGCGGACGTCGAGCTTTACGGCGGCGGTTGCGCCGCCGGGTGTGGCGCAGGATGTGGTGCTTGAAAAATAGAGGACCCTTTTTTTATATATAGATGAATTTCACCGGCAACAAATTATGTCTCGGATTTTATCTGAGAGAAACAGAGAGCCTGTTGGATACTGACATCATTTTTGTAACATTTAATTGTGATTTAGCAGGCTGAGTTTAGTGTTTTATAATTTTTTGAGACAAAAATGATTATATATCAATACGAG CTCAATTGGGTCTCTTCTTTCAAACCCATCTAGAGAGAGAGAGGTTGTGAAAATGGCGAGACTGATCAGAGAAATTGGTAGTGTTAATGGAAGTTTTGGACTCGCCGGCGACATTTATTTGCTGTTTTGGGCGGCTCTGTTTACACTCTGCATAATCTCAACCATAATTTTCTCTTGCTCCGACGGCATGTCAAAAGAGAGGAATTCCACGGCGGACGTCGAGCTTTACGGCGGCGGTTGCGCCGCCGGGTGTGGCGCAGGATGTGGTGCTTGAAAAATAGAGGACCCTTTTTTTATATATAGATGAATTTCACCGGCAACAAATTATGTCTCGGATTTTATCTGAGAGAAACAGAGAGCCTGTTGGATACTGACATCATTTTTGTAACATTTAATTGTGATTTAGCAGGCTGAGTTTAGTGTTTTATAATTTTTTGAGACAAAAATGATTATATATCAATACGAG ATGGCGAGACTGATCAGAGAAATTGGTAGTGTTAATGGAAGTTTTGGACTCGCCGGCGACATTTATTTGCTGTTTTGGGCGGCTCTGTTTACACTCTGCATAATCTCAACCATAATTTTCTCTTGCTCCGACGGCATGTCAAAAGAGAGGAATTCCACGGCGGACGTCGAGCTTTACGGCGGCGGTTGCGCCGCCGGGTGTGGCGCAGGATGTGGTGCTTGA MARLIREIGSVNGSFGLAGDIYLLFWAALFTLCIISTIIFSCSDGMSKERNSTADVELYGGGCAAGCGAGCGA Homology
BLAST of Tan0000472 vs. NCBI nr
Match: KAG6584341.1 (hypothetical protein SDJN03_20273, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 133.3 bits (334), Expect = 8.7e-28 Identity = 68/74 (91.89%), Postives = 70/74 (94.59%), Query Frame = 0
BLAST of Tan0000472 vs. NCBI nr
Match: KAE8652552.1 (hypothetical protein Csa_013579 [Cucumis sativus]) HSP 1 Score: 125.2 bits (313), Expect = 2.4e-25 Identity = 63/74 (85.14%), Postives = 67/74 (90.54%), Query Frame = 0
BLAST of Tan0000472 vs. NCBI nr
Match: KAG6572949.1 (hypothetical protein SDJN03_26836, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 117.1 bits (292), Expect = 6.4e-23 Identity = 60/69 (86.96%), Postives = 63/69 (91.30%), Query Frame = 0
BLAST of Tan0000472 vs. NCBI nr
Match: XP_015882794.1 (uncharacterized protein LOC107418606 [Ziziphus jujuba]) HSP 1 Score: 94.4 bits (233), Expect = 4.5e-16 Identity = 49/73 (67.12%), Postives = 59/73 (80.82%), Query Frame = 0
BLAST of Tan0000472 vs. NCBI nr
Match: PON38946.1 (hypothetical protein PanWU01x14_308610 [Parasponia andersonii]) HSP 1 Score: 88.6 bits (218), Expect = 2.5e-14 Identity = 46/74 (62.16%), Postives = 53/74 (71.62%), Query Frame = 0
BLAST of Tan0000472 vs. ExPASy TrEMBL
Match: A0A0A0LQU7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042580 PE=4 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 1.1e-25 Identity = 63/74 (85.14%), Postives = 67/74 (90.54%), Query Frame = 0
BLAST of Tan0000472 vs. ExPASy TrEMBL
Match: A0A6P3ZT85 (uncharacterized protein LOC107418606 OS=Ziziphus jujuba OX=326968 GN=LOC107418606 PE=4 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 2.2e-16 Identity = 49/73 (67.12%), Postives = 59/73 (80.82%), Query Frame = 0
BLAST of Tan0000472 vs. ExPASy TrEMBL
Match: A0A803R005 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 1.8e-15 Identity = 46/74 (62.16%), Postives = 55/74 (74.32%), Query Frame = 0
BLAST of Tan0000472 vs. ExPASy TrEMBL
Match: A0A803R004 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 1.8e-15 Identity = 46/74 (62.16%), Postives = 55/74 (74.32%), Query Frame = 0
BLAST of Tan0000472 vs. ExPASy TrEMBL
Match: A0A2P5AQX4 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_308610 PE=4 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 1.2e-14 Identity = 46/74 (62.16%), Postives = 53/74 (71.62%), Query Frame = 0
BLAST of Tan0000472 vs. TAIR 10
Match: AT1G68238.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 48.5 bits (114), Expect = 2.6e-06 Identity = 24/54 (44.44%), Postives = 33/54 (61.11%), Query Frame = 0
BLAST of Tan0000472 vs. TAIR 10
Match: AT3G18250.1 (Putative membrane lipoprotein ) HSP 1 Score: 44.3 bits (103), Expect = 4.9e-05 Identity = 24/56 (42.86%), Postives = 36/56 (64.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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