Tan0000149 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAATCATTTGCGTGCGTATACTCTCGTTACGCTTTTCTAAAATCACAAGAGCAACTTTCCACTTTCCCCAAATTTCTCACATGCGAGGGGGAAATTTTCACTATTTCCTCACCGTGATTCCTCTGATTTCCCTCTAACTCTTCGCTTCCCATTTCCCTCTTGCTCTTCCCCTCTCATTTTTCTTTGGTTCTTACCTTTTGTTTTCTCTCTCGTGTTCTCATCATTTTTTTGTATCTCCTACAGCCCAAAATACGATCTGCAAAAGTGAAGATTTACTCCTCTCTCATCGCCTTTTTGCTTTGCCTCTCATCTCTCCGTCTCATGTGTCACCAAGAATTCAGGTATTTTCTTTTTCTATTTTGTCCTCTCTCTTACGAAAATTTTGTGGGGTTTCATTTGTGTATAATTTCAAAAGTCTTTCAGCATTCCATGTCAAATATTCTAGGGTTTTTCACTCTCAACTTTCTTGATTCAACGCATGTGGAGTTTTTTTAAATCCTTGTGGTAGTTTGTGCGATGGGTTGTTTGGGTTTTAAAAGAGATGAATACTAACCATAATCTCGTTCTTGAAAGAGATGTGCAATATATTGAATATATGCTTTAAATTTCATATTGTCTCTCATTAGTTTACTGCGGCTTTTATATTCAATATATTTAATTTGTTTTTAGGTTGGAGTTGAACAAAGTGAAGTTTTTTTTGTAAAAACAACGGTGTCATTTGAAAAAAATGTGGCTTCTATGCAGCTCTATCGAATAGATATATTGGCTTGCTGATATTCCACCTGTGAATAGATTTGCACAAAACATAATTACAGAAAGATGAGAATGGAAAGTTTGTCAAATGGTAACATTGTCCTTTCCCTTTTACAAATATATTAAATAAATGAAAGAAATTATGAAAAGGGAAGTCTAATGAAAATAAAGCGCAACTGACATGGTAATTTTGAATAAAGAATGAGTAATGATGAATCAAATCACAATCCTGCAAAAAATTAAAATCGAACTTGATTTTTTGGAGATTAGCCTTGATGAAGGGTTGTGAGGTGCAACATGATTGAGGGGCTGATGTACAATGTACTAGTTATCTGCTACTTTTTTTTTTTTGAAAAAGTTATCTGCTACTTGTACTCTCATAGGTTTGTTGCATTAATTTGATGCAATTTTCTAACTTGGATTGAATTGAAATTTTGTCATGTGGTTTTGACTTTGTTGTGTTTGTTCAGAAGTTGCCCAAGATGAAAGATTTAGTTGCACGATATTGTTATGTTCTATTTTCAATGATAAATCCATATGTATCTTATATTTTGGGATCTTCAAATCACATAACTGACATTCATTTTTTATCTCAAAACAAGTTTCTAGTCATACATAGTTAAAATACCCCTGAAATGTTTGCTATTTATTTCATAGTTTTGAACTTGTACAAATATGTGGATTAATTGCTGAATATATGCTCACAATACCGATGTGTGTTTTTTTTTTATATATCCGTTTCTAAATATACAAATTGTAAATCTTGATATAATTGTTTTGACTTGACTGTTTGTTAGCTAAAAGTTAACACTAACAACCAACAAAAAATTAAATTAGTTACTTTAGAGCCAAAAGTGATTCTCTCATGATTTTCTTTTGTGGAAGGCAATACCATAGATTGCTTTATGCTTATTAATTAATCAACTATATATTCTTAATACTCTTCTTTAGTTGGACTATTGTGGGGAGGTTGGCATAGTATTTCACATAGATCCATTGGAATTGTTTTGCAACACATCAACTCCTTTTTTTTTAGTACAATAGAAGTTGAGGATCCAAACCATAGATCTCATGGCCGTTAACACATTTAATATAGACCCTATCATTGTGGGTTTTTCTCCAATACTATCTATCTTTGTTGAGAAATTTCAACCAACCAAGTTATCTTTATTTCATTTTCTTAAGCATATCGTTGCATTTTCATTTTTCAAGTTAGTGATGTAAATATTTATTTCTTTATTTATACTAGCAGTTTAATTAAGGATGAATTCTATGTGCATCTTTATAATTCTTCATCATCAAGTATAATTAATTCTATCAATTATATGTTTTTTCTATGGGTTTATGGTTTAGTTGATGGTGTTATATGCTTATTTTAAGCTTAATTCATTTCGTGAGTGAACTTTCTGTTAGGTTGAAGTCTTATTGTTAAACTTCCTAGATTTTCAAACTTTTTTTTTCATTCTTCTATAGATTTTCAAACTTTTTTTTCATTCATCTATATATTTTCATTCTTCTATATATTTTCAAACTTTTTGGAAAATGCTTCAAGATTTGATAGTGCTTTGCGTCTTTGCTTGGTGGTGAATTTGATGTAGTAAAATAAAACCAAAAATCTATTGGCACTGTCACTACTCCTGGGGAAATTCACTCCCTTATTCACATTCTCCTCCTACAGGATGTCCCAATGCATAATCTTTTTATTTGGTCAAAACTTAGAGACTACATGGTCCTTTCCTGCAATGATAGATTTATTGTTTCCTTCAATCGGGAAGAATATGTTCCATCTAGTCGAGATTCACGTATTTTATAAGAGAATTTTTTATCGCTTTCCTTCACAATATTAGCTATTTGATTCTAATTTCTAGATGATTAACGGTAGAAAAGCCTTATTGCTAATAGGCTTCCAAAGAATCAATCTCAATTCAAATAGTTGTTTTTGGGGGGAGGGGGGAGGGGTCCCTATCAATACATTTTGAAGTAGAGTGGCATCCAAAGTAAAGCTCAAAGATCACAATAAACTATGATGGGCACTCATTTATATTTGCTCACGTTGGCAAAATTGAAATGTTGGTGTTGACAAGTTGAGGATGAATGGATATCCATGTACATGGATTTTAAGAAGATGAAAACCATTGAATGAAGGATATTCGTTATGGAGAATTCTTTTAAGAATTAACGTACATTGAGGTAAACAATTCACATTTTCGTTCACAAGTAGCTTTTATCACCTTTCTTAAAATTACTCACATGCTCAGTTCCAGACAAGTAAGCTGAAGCTATTTGGACTTTCTCAACTCCTCTAGATTTGGGTCAAATTTTGACTTTAACTAGTACCAAGAGAATGTTGCTTGGTATTGTATTTTTTTTATTAGTATTAATGTAGTTTATTCTTTCTGCAATTTATCTGGCTGCATAACAGAAATACTAGTGTAGTTTACGTTTTCCACAACTTATGAATTACTTTTTTTTGTCCCAAACATATATCAATATATATCCATTAATGGATTTTAATCTCTTTGAACAAACTGTCTTCTTACTTCTTTTTCTGTGAGGACAATAACTTTGACCTTTCTTTCTCTATATTGTACTAGATATGATTATGCTGAGACAACCACATAATCCATATGTGCTGATATATAATATTAGCTTTATTGTTTAAACTAGTGCATTTAGTTTATCAAAAATTCATTCTATATTTGATACTTCCTATCATATTAAATAATGTTTCTCCAAGGCATAATTTTAGGTCCAAAAGCTTAACGATATTTACTTGCTGTCATATGTGTAGCTTTACCAATTGGAGAATATGCGGCGGTGACTCTTCTATTGTTCTTTGGTCTCAAGTCCATTAAAGATGCATGGGATCTTCCTTCGAGTGTTCCTAAACAGGGTGATGAGAGTCCGCCAGAACTTGATGAATATGTCGAAGCAGAGGAGCTTGTTAAAGAAAAGGTAGATCCCCAATTATTAGTTTCCTCTATATTTTGAATTTTGTTTTGACAAGGCTCGAAAACTATTGGAGTTCAACAGGATCTTTGAAGCTATTAAGGTGACTAATACGTTTAAAATATATGTTACACTTGACTAGTAACTCTGTGTAGAGCTAGTTTTTATTAATACGTTTGTTGCTCTGTTCTGTTTGTTAAGGCAAATTTCAATGATAAGTACTGATGAGTACAAAATACATTTGTTGCTTCGTTTCATTTTGTTGTGTGCATAAGTTTTAGTTTAGGCACTTTCTTATTTTCTTCAAGAGCCAAAATGACACTTAAACTCATTTTCCACACTTTTTCTCCACTTTATAGGTTCCATAGGTACTTTTAGATTATTTTGAGATGCTTTAAGTCATAAGTCGTGTTTTGAGCATTTATGAAATTAGTCTTGTTCTGCTGAGAAATATCTGATTGTTGAACCCAACCCTTGTGTATTTGAAGTTAGTGGGTGGCTGGGAAGAATGATTTATTTTTGAAGTGTTTCTGATGTTAAAACAGGTAATTAAAATTTTAGAAAAGTTCTAGTAGCATCGTTATGCTGCCGAAATTTCAGAGTGAATGACGTGTCTTAAATAACACCCAAGTTATGTTTACTCCTAGAATTTAGGGTCGTTACACTTTGCATGTTTTAAATCTCTCTCAAATCAATTTCAGTAATAATGTAGTATTGGTTCTAACAAGTATGAACCTTCAATTTGAAGTTTGAGTGTGATTCTCAACTACACTCAACTACTTGGCGCTTAATGTTGTGTTTGAGTTTGCAGTTTGAGTGCGAACCTTCAGTTATGCTCACCCTTGTTGCTTAATGTTGGTTTTGCAGGTAATACTCAACTACTTGGCGGGTGACAAAGGTGTTGCAGAATTATGGTGACTTTTTCAAAGTTTTGGTCATAATGTTGCCAATAAGTTTCATGTTTTAACCCTTTATAGTGTGTTAGGTTAATGAATGTAAGTTCTCTTGTATTGTAAACTTGCTTGAAGTGTTAGTTGAGTTTATGGCTTAGGATCGTTACAATAGTTCTTGTAATTTTTGAATTGTTGACATGAGGTTTGATAAGTTCTTGTAATTTTACAATTGTTCATGAGCTTACGTTCAATATAATTTATTGGAATGCAA AAAAAAATCATTTGCGTGCGTATACTCTCGTTACGCTTTTCTAAAATCACAAGAGCAACTTTCCACTTTCCCCAAATTTCTCACATGCGAGGGGGAAATTTTCACTATTTCCTCACCGTGATTCCTCTGATTTCCCTCTAACTCTTCGCTTCCCATTTCCCTCTTGCTCTTCCCCTCTCATTTTTCTTTGGTTCTTACCTTTTGTTTTCTCTCTCGTGTTCTCATCATTTTTTTGTATCTCCTACAGCCCAAAATACGATCTGCAAAAGTGAAGATTTACTCCTCTCTCATCGCCTTTTTGCTTTGCCTCTCATCTCTCCGTCTCATGTGTCACCAAGAATTCAGCTCTATCGAATAGATATATTGGCTTGCTGATATTCCACCTGTGAATAGATTTGCACAAAACATAATTACAGAAAGATGAGAATGGAAAGTTTGTCAAATGCTTTACCAATTGGAGAATATGCGGCGGTGACTCTTCTATTGTTCTTTGGTCTCAAGTCCATTAAAGATGCATGGGATCTTCCTTCGAGTGTTCCTAAACAGGGTGATGAGAGTCCGCCAGAACTTGATGAATATGTCGAAGCAGAGGAGCTTGTTAAAGAAAAGGTAATACTCAACTACTTGGCGGGTGACAAAGGTGTTGCAGAATTATGGTGACTTTTTCAAAGTTTTGGTCATAATGTTGCCAATAAGTTTCATGTTTTAACCCTTTATAGTGTGTTAGGTTAATGAATGTAAGTTCTCTTGTATTGTAAACTTGCTTGAAGTGTTAGTTGAGTTTATGGCTTAGGATCGTTACAATAGTTCTTGTAATTTTTGAATTGTTGACATGAGGTTTGATAAGTTCTTGTAATTTTACAATTGTTCATGAGCTTACGTTCAATATAATTTATTGGAATGCAA ATGAGAATGGAAAGTTTGTCAAATGCTTTACCAATTGGAGAATATGCGGCGGTGACTCTTCTATTGTTCTTTGGTCTCAAGTCCATTAAAGATGCATGGGATCTTCCTTCGAGTGTTCCTAAACAGGGTGATGAGAGTCCGCCAGAACTTGATGAATATGTCGAAGCAGAGGAGCTTGTTAAAGAAAAGGTAATACTCAACTACTTGGCGGGTGACAAAGGTGTTGCAGAATTATGGTGA MRMESLSNALPIGEYAAVTLLLFFGLKSIKDAWDLPSSVPKQGDESPPELDEYVEAEELVKEKVILNYLAGDKGVAELW Homology
BLAST of Tan0000149 vs. ExPASy Swiss-Prot
Match: Q9T0H9 (Protein PAM71-homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAM71-HL PE=1 SV=2) HSP 1 Score: 80.1 bits (196), Expect = 1.2e-14 Identity = 40/54 (74.07%), Postives = 44/54 (81.48%), Query Frame = 0
BLAST of Tan0000149 vs. ExPASy Swiss-Prot
Match: Q2R2Z4 (GDT1-like protein 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0544500 PE=2 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 3.5e-09 Identity = 34/55 (61.82%), Postives = 37/55 (67.27%), Query Frame = 0
BLAST of Tan0000149 vs. NCBI nr
Match: XP_038900282.1 (protein PAM71-homolog, chloroplastic isoform X1 [Benincasa hispida]) HSP 1 Score: 107.5 bits (267), Expect = 5.5e-20 Identity = 53/55 (96.36%), Postives = 54/55 (98.18%), Query Frame = 0
BLAST of Tan0000149 vs. NCBI nr
Match: XP_038900287.1 (protein PAM71-homolog, chloroplastic isoform X2 [Benincasa hispida]) HSP 1 Score: 107.5 bits (267), Expect = 5.5e-20 Identity = 53/55 (96.36%), Postives = 54/55 (98.18%), Query Frame = 0
BLAST of Tan0000149 vs. NCBI nr
Match: XP_008438406.1 (PREDICTED: GDT1-like protein 2, chloroplastic [Cucumis melo]) HSP 1 Score: 106.7 bits (265), Expect = 9.4e-20 Identity = 53/55 (96.36%), Postives = 54/55 (98.18%), Query Frame = 0
BLAST of Tan0000149 vs. NCBI nr
Match: KAA0049183.1 (GDT1-like protein 2 [Cucumis melo var. makuwa] >TYK17377.1 GDT1-like protein 2 [Cucumis melo var. makuwa]) HSP 1 Score: 106.7 bits (265), Expect = 9.4e-20 Identity = 53/55 (96.36%), Postives = 54/55 (98.18%), Query Frame = 0
BLAST of Tan0000149 vs. NCBI nr
Match: XP_022974902.1 (protein PAM71-homolog, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 105.1 bits (261), Expect = 2.7e-19 Identity = 52/55 (94.55%), Postives = 54/55 (98.18%), Query Frame = 0
BLAST of Tan0000149 vs. ExPASy TrEMBL
Match: A0A5A7TZZ5 (GDT1 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G002370 PE=3 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 4.6e-20 Identity = 53/55 (96.36%), Postives = 54/55 (98.18%), Query Frame = 0
BLAST of Tan0000149 vs. ExPASy TrEMBL
Match: A0A1S3AWY0 (GDT1 family protein OS=Cucumis melo OX=3656 GN=LOC103483513 PE=3 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 4.6e-20 Identity = 53/55 (96.36%), Postives = 54/55 (98.18%), Query Frame = 0
BLAST of Tan0000149 vs. ExPASy TrEMBL
Match: A0A6J1IBK7 (GDT1 family protein OS=Cucurbita maxima OX=3661 GN=LOC111473197 PE=3 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 1.3e-19 Identity = 52/55 (94.55%), Postives = 54/55 (98.18%), Query Frame = 0
BLAST of Tan0000149 vs. ExPASy TrEMBL
Match: A0A6J1IBI9 (GDT1 family protein OS=Cucurbita maxima OX=3661 GN=LOC111473663 PE=3 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 1.3e-19 Identity = 52/55 (94.55%), Postives = 54/55 (98.18%), Query Frame = 0
BLAST of Tan0000149 vs. ExPASy TrEMBL
Match: A0A6J1G9C7 (GDT1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111452154 PE=3 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 1.3e-19 Identity = 52/55 (94.55%), Postives = 54/55 (98.18%), Query Frame = 0
BLAST of Tan0000149 vs. TAIR 10
Match: AT4G13590.1 (Uncharacterized protein family (UPF0016) ) HSP 1 Score: 80.1 bits (196), Expect = 8.8e-16 Identity = 40/54 (74.07%), Postives = 44/54 (81.48%), Query Frame = 0
BLAST of Tan0000149 vs. TAIR 10
Match: AT4G13590.2 (Uncharacterized protein family (UPF0016) ) HSP 1 Score: 80.1 bits (196), Expect = 8.8e-16 Identity = 40/54 (74.07%), Postives = 44/54 (81.48%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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