Spg039092 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg039092
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Reverse transcriptase domain-containing protein
Location	scaffold13: 23023282 .. 23024718 (+)
RNA-Seq Expression	Spg039092
Synteny	Spg039092

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAAAACAAGAGCAAGAAAAGAGAGGGATAATGAGGAAGAAGAGGTGCCTGTCACTCCTGAGGTTCAGAAAGTAAAAGCAAAGAAGAAGAAAACACCGGAGGAAAAAGAAGCTAAAAGAAGACGAAGACAACAACGGGCTAAGGAGCAAGAAGCTGTCCAAAAGGAGACAGACGAGGTTACTACTACAGTGGAAGAAGGAAATCCGAAAGAACCTGAGGTGCAGAACCCAGAGGCGGTCGAACTAATAGTCGCAGATACGGAAGGAGTTCAAGAAGAGAATACTGAGGAGATTCAAGAAAAGCAGACTGATGAGATGCAAGAAGAACAGGCAGAGGTTGCGCTTGAAAAAGGTAATGAACAGGAGCAAGAGGCTCGTGTTGAGGTCATCATGCTAGAAGTTCCAAAATGACATCGTGTGAAGCGAAAGGCTGGACGCGTCCAAGTAATTCGAACTGATACCCCATCACCACCATCGTCGGATTCTGAGAAAGAGAAGGCAGAACGAGAGGAACGAGAGAAGAAGGAAGCTGAGGACAGAGAGAGAGAAGAAGCAGCAGAAGAAACTTTGAGAAAGCTTAGAGAAGACAGAGGCAAAGGAATTGCTGAAGCATCGGATGAACCTGAAGAGGAAGCAAGGGAAGGACCTTTCATCCGCTTCATCAATGCGCTTGCTCGAACAAAATACCAAGAGATGCTAAGAAGAGATTTCTTATTCGAAAGAGGGTTTGGTGACGATCTACCACATTTCTTGAGAGCAGGAATCGCAAATCTTGGGTGGAGTCAGTTCTGTACGAAGCCAGACCCAGTGAATTCGAATATTGTTCGAGAAGTTTACGCAAATATTGATAATGCAGAGGAATTTCAGGGCATAGTTCGAGGAGTACCTGTTAACTGGAGCCCAGGGGCTATCAACTCGTTATTCAATCTCTAGGACTTCCCACACGCGGGCTTTAATGAGATGGTCATGGCACCATCAAGTGATCAGTTGAATGCGGCGGTCCGGGAGGTGGGAATTGAAGGGTCTCAATGGAGGCTATTAAAGACAGAGAAACGCACGTTTCAAGCGGCTTATCTAAAGAGTGAAGCCAATACTTGGTTGGGCTTCATCAAGCTGCGTTTGCTGCCGACTACGCATGATTCGACAGTGTCTCGCGACTGTGTGATTCTGATATTCGCAATTCTTCGAGCCTTAAGTATTGATGTTGGAAAAATAATTTCGAATGAGATCTTTAATTGCTGGCGCAAAAAGGTGGGGAAGCTGTTTTTCCCGAACACGATCACGATGCTATGCAGAAGGGCAGGAGTGCCCACGGTTCCAGAGGATGTGGTTTTGCTTGACAAGGGAATCGTCGATACGCCTAATCTGGCGCACTTCAGCGAACGCAAGAGGCACGCCAGGGTGGGCTTGTGTGTGGAATTCATCAAATCTTAG

mRNA sequence

ATGGAAAAAACAAGAGCAAGAAAAGAGAGGGATAATGAGGAAGAAGAGGTGCCTGTCACTCCTGAGGTTCAGAAAGTAAAAGCAAAGAAGAAGAAAACACCGGAGGAAAAAGAAGCTAAAAGAAGACGAAGACAACAACGGGCTAAGGAGCAAGAAGCTGTCCAAAAGGAGACAGACGAGGTTACTACTACAGTGGAAGAAGGAAATCCGAAAGAACCTGAGGTGCAGAACCCAGAGGCGGTCGAACTAATAGTCGCAGATACGGAAGGAGTTCAAGAAGAGAATACTGAGGAGATTCAAGAAAAGCAGACTGATGAGATGCAAGAAGAACAGGCAGAGCGAAAGGCTGGACGCGTCCAAGTAATTCGAACTGATACCCCATCACCACCATCGTCGGATTCTGAGAAAGAGAAGGCAGAACGAGAGGAACGAGAGAAGAAGGAAGCTGAGGACAGAGAGAGAGAAGAAGCAGCAGAAGAAACTTTGAGAAAGCTTAGAGAAGACAGAGGCAAAGGAATTGCTGAAGCATCGGATGAACCTGAAGAGGAAGCAAGGGAAGGACCTTTCATCCGCTTCATCAATGCGCTTGCTCGAACAAAATACCAAGAGATGCTAAGAAGAGATTTCTTATTCGAAAGAGGGTTTGGTGACGATCTACCACATTTCTTGAGAGCAGGAATCGCAAATCTTGGGTGGAGTCAGTTCTGTACGAAGCCAGACCCAGTGAATTCGAATATTGTTCGAGAAGTTTACGCAAATATTGATAATGCAGAGGAATTTCAGGGCATAGTTCGAGGAGTACCTTTGAATGCGGCGGTCCGGGAGGTGGGAATTGAAGGGTCTCAATGGAGGCTATTAAAGACAGAGAAACGCACGTTTCAAGCGGCTTATCTAAAGAGTGAAGCCAATACTTGGTTGGGCTTCATCAAGCTGCGTTTGCTGCCGACTACGCATGATTCGACAGTGTCTCGCGACTGTGTGATTCTGATATTCGCAATTCTTCGAGCCTTAAGTATTGATGTTGGAAAAATAATTTCGAATGAGATCTTTAATTGCTGGCGCAAAAAGGTGGGGAAGCTGTTTTTCCCGAACACGATCACGATGCTATGCAGAAGGGCAGGAGTGCCCACGGTTCCAGAGGATGTGGTTTTGCTTGACAAGGGAATCGTCGATACGCCTAATCTGGCGCACTTCAGCGAACGCAAGAGGCACGCCAGGGTGGGCTTGTGTGTGGAATTCATCAAATCTTAG

Coding sequence (CDS)

ATGGAAAAAACAAGAGCAAGAAAAGAGAGGGATAATGAGGAAGAAGAGGTGCCTGTCACTCCTGAGGTTCAGAAAGTAAAAGCAAAGAAGAAGAAAACACCGGAGGAAAAAGAAGCTAAAAGAAGACGAAGACAACAACGGGCTAAGGAGCAAGAAGCTGTCCAAAAGGAGACAGACGAGGTTACTACTACAGTGGAAGAAGGAAATCCGAAAGAACCTGAGGTGCAGAACCCAGAGGCGGTCGAACTAATAGTCGCAGATACGGAAGGAGTTCAAGAAGAGAATACTGAGGAGATTCAAGAAAAGCAGACTGATGAGATGCAAGAAGAACAGGCAGAGCGAAAGGCTGGACGCGTCCAAGTAATTCGAACTGATACCCCATCACCACCATCGTCGGATTCTGAGAAAGAGAAGGCAGAACGAGAGGAACGAGAGAAGAAGGAAGCTGAGGACAGAGAGAGAGAAGAAGCAGCAGAAGAAACTTTGAGAAAGCTTAGAGAAGACAGAGGCAAAGGAATTGCTGAAGCATCGGATGAACCTGAAGAGGAAGCAAGGGAAGGACCTTTCATCCGCTTCATCAATGCGCTTGCTCGAACAAAATACCAAGAGATGCTAAGAAGAGATTTCTTATTCGAAAGAGGGTTTGGTGACGATCTACCACATTTCTTGAGAGCAGGAATCGCAAATCTTGGGTGGAGTCAGTTCTGTACGAAGCCAGACCCAGTGAATTCGAATATTGTTCGAGAAGTTTACGCAAATATTGATAATGCAGAGGAATTTCAGGGCATAGTTCGAGGAGTACCTTTGAATGCGGCGGTCCGGGAGGTGGGAATTGAAGGGTCTCAATGGAGGCTATTAAAGACAGAGAAACGCACGTTTCAAGCGGCTTATCTAAAGAGTGAAGCCAATACTTGGTTGGGCTTCATCAAGCTGCGTTTGCTGCCGACTACGCATGATTCGACAGTGTCTCGCGACTGTGTGATTCTGATATTCGCAATTCTTCGAGCCTTAAGTATTGATGTTGGAAAAATAATTTCGAATGAGATCTTTAATTGCTGGCGCAAAAAGGTGGGGAAGCTGTTTTTCCCGAACACGATCACGATGCTATGCAGAAGGGCAGGAGTGCCCACGGTTCCAGAGGATGTGGTTTTGCTTGACAAGGGAATCGTCGATACGCCTAATCTGGCGCACTTCAGCGAACGCAAGAGGCACGCCAGGGTGGGCTTGTGTGTGGAATTCATCAAATCTTAG

Protein sequence

MEKTRARKERDNEEEEVPVTPEVQKVKAKKKKTPEEKEAKRRRRQQRAKEQEAVQKETDEVTTTVEEGNPKEPEVQNPEAVELIVADTEGVQEENTEEIQEKQTDEMQEEQAERKAGRVQVIRTDTPSPPSSDSEKEKAEREEREKKEAEDREREEAAEETLRKLREDRGKGIAEASDEPEEEAREGPFIRFINALARTKYQEMLRRDFLFERGFGDDLPHFLRAGIANLGWSQFCTKPDPVNSNIVREVYANIDNAEEFQGIVRGVPLNAAVREVGIEGSQWRLLKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDCVILIFAILRALSIDVGKIISNEIFNCWRKKVGKLFFPNTITMLCRRAGVPTVPEDVVLLDKGIVDTPNLAHFSERKRHARVGLCVEFIKS

Homology

[Close]

BLAST of Spg039092 vs. NCBI nr
Match: PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii])

HSP 1 Score: 115.5 bits (288), Expect = 1.1e-21
Identity = 77/251 (30.68%), Postives = 116/251 (46.22%), Query Frame = 0


Query: 190 IRFINALARTKYQEMLR-RDFLFERGFGDD-------LPHFLRAGIANLGWSQFCTKPDP 249
           ++F    A T+Y+  ++ R    E+GF  D       LP F+   I    W QFC  P+ 
Sbjct: 23  VKFETEAAATRYENNIQNRPLNAEKGFVLDNSETMGQLP-FIAQVITQHNWKQFCAHPED 82

Query: 250 VNSNIVREVYANIDNAEEFQGIVRGVPLN------------------------------- 309
               +VRE YAN+ + EE    VRGV ++                               
Sbjct: 83  PIVPLVREFYANLTDPEENTVYVRGVQVSWSEEAINAVFGLGDPVDEHSEFIQNITQQDL 142

Query: 310 -AAVREVGIEGSQWRLLKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDCVIL 369
              +  V   G++W +      T   + L   A  W  F+K RLLPTTH  TVS+D ++L
Sbjct: 143 ITVLETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKTVSKDRMLL 202

Query: 370 IFAILRALSIDVGKIISNEIFNCWRKKVGKLFFPNTITMLCRRAGVPTVPEDVVLLDKGI 401
           + ++L   SI+VG++I +EI  C  +K G LFFP+ IT LCR A  P +  +  L + G 
Sbjct: 203 LHSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLITRLCRNARAPFLVNEEKLHNTGE 262

[Close]

BLAST of Spg039092 vs. NCBI nr
Match: PON35554.1 (hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii])

HSP 1 Score: 113.2 bits (282), Expect = 5.3e-21
Identity = 75/251 (29.88%), Postives = 115/251 (45.82%), Query Frame = 0


Query: 190 IRFINALARTKYQEMLR-RDFLFERGFGDD-------LPHFLRAGIANLGWSQFCTKPDP 249
           ++F    A T+Y+  ++ R    E+GF  D       LP F+   I    W QFC  P+ 
Sbjct: 14  VKFETEAAETRYENNIQNRPLNAEKGFVLDNSETMGQLP-FIAQVITQHNWKQFCAHPED 73

Query: 250 VNSNIVREVYANIDNAEEFQGIVRGVPLN------------------------------- 309
               +VRE YAN+ +  E    VRGV ++                               
Sbjct: 74  PIVPLVREFYANLTDPVENTVYVRGVQVSWSEEAINAVFGLGDPVDEHSEFIENITEHDL 133

Query: 310 -AAVREVGIEGSQWRLLKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDCVIL 369
              +  V + G++W +      T   + L   A  W  F+K  LLPTTH  TVS+D ++L
Sbjct: 134 ITVLETVAVAGAEWNVSAQGAYTCIRSALTPAAKVWFHFLKSHLLPTTHGKTVSKDRMLL 193

Query: 370 IFAILRALSIDVGKIISNEIFNCWRKKVGKLFFPNTITMLCRRAGVPTVPEDVVLLDKGI 401
           + ++L   SI+VG++I +EI  C  +K G LFFP+ IT LCR A  P +  +  L + G 
Sbjct: 194 LHSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLITRLCRNARAPFLVNEEKLHNTGE 253

[Close]

BLAST of Spg039092 vs. NCBI nr
Match: EOY08849.1 (Uncharacterized protein TCM_024087 [Theobroma cacao])

HSP 1 Score: 108.2 bits (269), Expect = 1.7e-19
Identity = 66/188 (35.11%), Postives = 100/188 (53.19%), Query Frame = 0


Query: 191 RFINALARTKYQ-EMLRRDFLFERGFGDDLPHF--LRAGIANLGWSQFCTKPDPVNSNIV 250
           +FI+  A T+Y   ++ +  + ERG    +  +  +   I +  W QFC +PD     +V
Sbjct: 18  KFISVEAFTRYHTSLINQRPIPERGIEIPILPYKEINDMIHDRYWCQFCHQPDATVVPVV 77

Query: 251 REVYANIDNAEEFQGIVRGVPLNAAVREVGIEGSQWRLLKTEKRTFQAAYLKSEANTWLG 310
           RE YAN+   E   G+              + G+QW+    E  +F+ + +K E   WL 
Sbjct: 78  REFYANV--VEHVDGV------------AFVRGAQWKTSHDEPVSFKRSVMKKELQVWLH 137

Query: 311 FIKLRLLPTTHDSTVSRDCVILIFAILRALSIDVGKIISNEIFNCWRKKVGKLFFPNTIT 370
           F+  RLL +TH S V++D  +LI+AI+   SIDVGK+IS+ I +  R K   + FP+ IT
Sbjct: 138 FVAARLLSSTHISDVTKDRAVLIYAIVAHKSIDVGKVISHAILHTGRTKRDGIGFPSLIT 191

Query: 371 MLCRRAGV 376
            LC RAGV
Sbjct: 198 ALCARAGV 191

[Close]

BLAST of Spg039092 vs. NCBI nr
Match: PON70375.1 (hypothetical protein PanWU01x14_080440 [Parasponia andersonii])

HSP 1 Score: 107.8 bits (268), Expect = 2.2e-19
Identity = 67/238 (28.15%), Postives = 109/238 (45.80%), Query Frame = 0


Query: 190 IRFINALARTKYQEMLR-------RDFLFERGFGDDLPHFLRAGIANLGWSQFCTKPDPV 249
           ++F +  A  +Y+E ++       ++F+++     + P F+   I    W  FC  P+  
Sbjct: 44  VKFESKAAEIRYEENIQNRPLSVEKEFVWDNSKPLEQPPFIADVIIQHNWQLFCAHPEDP 103

Query: 250 NSNIVREVYANIDNAEEFQGIVRG--VPLNA----------------------------- 309
              +VRE Y N+ N ++    +RG  VPL+                              
Sbjct: 104 IVPLVREFYTNMTNPDDDTVYIRGVQVPLSVEAINTIFSLGDPIDEHSEFVEDITKPELV 163

Query: 310 -AVREVGIEGSQWRLLKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDCVILI 369
             +  V I G++W +      T   + L   A  W  F+K RLLPTTH  TVS++ V L+
Sbjct: 164 IVLETVAIVGAEWNVSSQGAYTCLRSSLNPPAKVWYHFLKSRLLPTTHGKTVSKEHVSLL 223

Query: 370 FAILRALSIDVGKIISNEIFNCWRKKVGKLFFPNTITMLCRRAGVPTVPEDVVLLDKG 389
           +++L   SI+VG++I  EI  C  +K G LFFP+ IT +CR    P +  +  L + G
Sbjct: 224 YSMLTGKSINVGRMIHREICACAARKSGALFFPSLITSMCRNTRAPYLVNEEKLHNTG 281

[Close]

BLAST of Spg039092 vs. NCBI nr
Match: TYG52543.1 (hypothetical protein ES288_D09G036700v1 [Gossypium darwinii])

HSP 1 Score: 105.9 bits (263), Expect = 8.5e-19
Identity = 67/188 (35.64%), Postives = 97/188 (51.60%), Query Frame = 0


Query: 200 KYQEMLRRDFLFERGFG---DDL---PHFLRAGIANLGWSQFCTKPDPVNSNIVREVYAN 259
           K+Q M+      E+GFG   +DL   P  +R  I  L W +FC      +  +VRE YA+
Sbjct: 32  KHQPMMS-----EKGFGLKSNDLMVVPIPIRKKINALKWERFCDVRSLPDDELVREFYAS 91

Query: 260 IDNAEEFQGIVRGVP------LNAAVREVGIEGSQWRLLKTEKRTFQAAYLKSEANTWLG 319
           +   +  + IVR         L   +  V   GSQW +      + Q  YLK  A  W  
Sbjct: 92  LTTQDATEVIVRKKSNINWDFLQQVLDVVTNLGSQWIIRNYGSHSCQREYLKPVAKVWFY 151

Query: 320 FIKLRLLPTTHDSTVSRDCVILIFAILRALSIDVGKIISNEIFNCWRKKVGKLFFPNTIT 376
           F++   +P +H ST+S + ++L++AIL   SI+VGKII  EI NC +KK    +FP+ IT
Sbjct: 152 FVRYSFMPISHSSTISMEWMLLLYAILTEKSINVGKIILKEIQNCAKKKARSAYFPSLIT 211

[Close]

BLAST of Spg039092 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 5.2e-22
Identity = 77/251 (30.68%), Postives = 116/251 (46.22%), Query Frame = 0


Query: 190 IRFINALARTKYQEMLR-RDFLFERGFGDD-------LPHFLRAGIANLGWSQFCTKPDP 249
           ++F    A T+Y+  ++ R    E+GF  D       LP F+   I    W QFC  P+ 
Sbjct: 23  VKFETEAAATRYENNIQNRPLNAEKGFVLDNSETMGQLP-FIAQVITQHNWKQFCAHPED 82

Query: 250 VNSNIVREVYANIDNAEEFQGIVRGVPLN------------------------------- 309
               +VRE YAN+ + EE    VRGV ++                               
Sbjct: 83  PIVPLVREFYANLTDPEENTVYVRGVQVSWSEEAINAVFGLGDPVDEHSEFIQNITQQDL 142

Query: 310 -AAVREVGIEGSQWRLLKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDCVIL 369
              +  V   G++W +      T   + L   A  W  F+K RLLPTTH  TVS+D ++L
Sbjct: 143 ITVLETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKTVSKDRMLL 202

Query: 370 IFAILRALSIDVGKIISNEIFNCWRKKVGKLFFPNTITMLCRRAGVPTVPEDVVLLDKGI 401
           + ++L   SI+VG++I +EI  C  +K G LFFP+ IT LCR A  P +  +  L + G 
Sbjct: 203 LHSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLITRLCRNARAPFLVNEEKLHNTGE 262

[Close]

BLAST of Spg039092 vs. ExPASy TrEMBL
Match: A0A2P5AGA5 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_335450 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.6e-21
Identity = 75/251 (29.88%), Postives = 115/251 (45.82%), Query Frame = 0


Query: 190 IRFINALARTKYQEMLR-RDFLFERGFGDD-------LPHFLRAGIANLGWSQFCTKPDP 249
           ++F    A T+Y+  ++ R    E+GF  D       LP F+   I    W QFC  P+ 
Sbjct: 14  VKFETEAAETRYENNIQNRPLNAEKGFVLDNSETMGQLP-FIAQVITQHNWKQFCAHPED 73

Query: 250 VNSNIVREVYANIDNAEEFQGIVRGVPLN------------------------------- 309
               +VRE YAN+ +  E    VRGV ++                               
Sbjct: 74  PIVPLVREFYANLTDPVENTVYVRGVQVSWSEEAINAVFGLGDPVDEHSEFIENITEHDL 133

Query: 310 -AAVREVGIEGSQWRLLKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDCVIL 369
              +  V + G++W +      T   + L   A  W  F+K  LLPTTH  TVS+D ++L
Sbjct: 134 ITVLETVAVAGAEWNVSAQGAYTCIRSALTPAAKVWFHFLKSHLLPTTHGKTVSKDRMLL 193

Query: 370 IFAILRALSIDVGKIISNEIFNCWRKKVGKLFFPNTITMLCRRAGVPTVPEDVVLLDKGI 401
           + ++L   SI+VG++I +EI  C  +K G LFFP+ IT LCR A  P +  +  L + G 
Sbjct: 194 LHSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLITRLCRNARAPFLVNEEKLHNTGE 253

[Close]

BLAST of Spg039092 vs. ExPASy TrEMBL
Match: A0A061F2U9 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_024087 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 8.2e-20
Identity = 66/188 (35.11%), Postives = 100/188 (53.19%), Query Frame = 0


Query: 191 RFINALARTKYQ-EMLRRDFLFERGFGDDLPHF--LRAGIANLGWSQFCTKPDPVNSNIV 250
           +FI+  A T+Y   ++ +  + ERG    +  +  +   I +  W QFC +PD     +V
Sbjct: 18  KFISVEAFTRYHTSLINQRPIPERGIEIPILPYKEINDMIHDRYWCQFCHQPDATVVPVV 77

Query: 251 REVYANIDNAEEFQGIVRGVPLNAAVREVGIEGSQWRLLKTEKRTFQAAYLKSEANTWLG 310
           RE YAN+   E   G+              + G+QW+    E  +F+ + +K E   WL 
Sbjct: 78  REFYANV--VEHVDGV------------AFVRGAQWKTSHDEPVSFKRSVMKKELQVWLH 137

Query: 311 FIKLRLLPTTHDSTVSRDCVILIFAILRALSIDVGKIISNEIFNCWRKKVGKLFFPNTIT 370
           F+  RLL +TH S V++D  +LI+AI+   SIDVGK+IS+ I +  R K   + FP+ IT
Sbjct: 138 FVAARLLSSTHISDVTKDRAVLIYAIVAHKSIDVGKVISHAILHTGRTKRDGIGFPSLIT 191

Query: 371 MLCRRAGV 376
            LC RAGV
Sbjct: 198 ALCARAGV 191

[Close]

BLAST of Spg039092 vs. ExPASy TrEMBL
Match: A0A2P5DAQ2 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_080440 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.1e-19
Identity = 67/238 (28.15%), Postives = 109/238 (45.80%), Query Frame = 0


Query: 190 IRFINALARTKYQEMLR-------RDFLFERGFGDDLPHFLRAGIANLGWSQFCTKPDPV 249
           ++F +  A  +Y+E ++       ++F+++     + P F+   I    W  FC  P+  
Sbjct: 44  VKFESKAAEIRYEENIQNRPLSVEKEFVWDNSKPLEQPPFIADVIIQHNWQLFCAHPEDP 103

Query: 250 NSNIVREVYANIDNAEEFQGIVRG--VPLNA----------------------------- 309
              +VRE Y N+ N ++    +RG  VPL+                              
Sbjct: 104 IVPLVREFYTNMTNPDDDTVYIRGVQVPLSVEAINTIFSLGDPIDEHSEFVEDITKPELV 163

Query: 310 -AVREVGIEGSQWRLLKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDCVILI 369
             +  V I G++W +      T   + L   A  W  F+K RLLPTTH  TVS++ V L+
Sbjct: 164 IVLETVAIVGAEWNVSSQGAYTCLRSSLNPPAKVWYHFLKSRLLPTTHGKTVSKEHVSLL 223

Query: 370 FAILRALSIDVGKIISNEIFNCWRKKVGKLFFPNTITMLCRRAGVPTVPEDVVLLDKG 389
           +++L   SI+VG++I  EI  C  +K G LFFP+ IT +CR    P +  +  L + G
Sbjct: 224 YSMLTGKSINVGRMIHREICACAARKSGALFFPSLITSMCRNTRAPYLVNEEKLHNTG 281

[Close]

BLAST of Spg039092 vs. ExPASy TrEMBL
Match: A0A5D2B8V0 (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_D09G036700v1 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 4.1e-19
Identity = 67/188 (35.64%), Postives = 97/188 (51.60%), Query Frame = 0


Query: 200 KYQEMLRRDFLFERGFG---DDL---PHFLRAGIANLGWSQFCTKPDPVNSNIVREVYAN 259
           K+Q M+      E+GFG   +DL   P  +R  I  L W +FC      +  +VRE YA+
Sbjct: 32  KHQPMMS-----EKGFGLKSNDLMVVPIPIRKKINALKWERFCDVRSLPDDELVREFYAS 91

Query: 260 IDNAEEFQGIVRGVP------LNAAVREVGIEGSQWRLLKTEKRTFQAAYLKSEANTWLG 319
           +   +  + IVR         L   +  V   GSQW +      + Q  YLK  A  W  
Sbjct: 92  LTTQDATEVIVRKKSNINWDFLQQVLDVVTNLGSQWIIRNYGSHSCQREYLKPVAKVWFY 151

Query: 320 FIKLRLLPTTHDSTVSRDCVILIFAILRALSIDVGKIISNEIFNCWRKKVGKLFFPNTIT 376
           F++   +P +H ST+S + ++L++AIL   SI+VGKII  EI NC +KK    +FP+ IT
Sbjct: 152 FVRYSFMPISHSSTISMEWMLLLYAILTEKSINVGKIILKEIQNCAKKKARSAYFPSLIT 211

The following BLAST results are available for this feature:

BLAST of Spg039092 vs. NCBI nr


Match Name	E-value	Identity	Description
PON46472.1	1.1e-21	30.68	hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]	[more]
PON35554.1	5.3e-21	29.88	hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]	[more]
EOY08849.1	1.7e-19	35.11	Uncharacterized protein TCM_024087 [Theobroma cacao]	[more]
PON70375.1	2.2e-19	28.15	hypothetical protein PanWU01x14_080440 [Parasponia andersonii]	[more]
TYG52543.1	8.5e-19	35.64	hypothetical protein ES288_D09G036700v1 [Gossypium darwinii]	[more]

BLAST of Spg039092 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg039092 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2P5BCG4	5.2e-22	30.68	Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1...	[more]
A0A2P5AGA5	2.6e-21	29.88	Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1...	[more]
A0A061F2U9	8.2e-20	35.11	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_024087 PE=4 SV=1	[more]
A0A2P5DAQ2	1.1e-19	28.15	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_080440 PE...	[more]
A0A5D2B8V0	4.1e-19	35.64	Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_D09G036700v1 PE=...	[more]

BLAST of Spg039092 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 132..168
None	No IPR available	COILS	Coil	Coil	coord: 93..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..185
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 130..185

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg039092.1	Spg039092.1	mRNA