Spg038877 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg038877
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Polypyrimidine tract-binding protein-like protein 2
Location	scaffold12: 1498574 .. 1503770 (+)
RNA-Seq Expression	Spg038877
Synteny	Spg038877

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATTGCGATATTGCTTGAATGGCTGGATTGATCTCTCAGGTGCTTTCTTGATATTGGTTTGTAAATTGCTCAGATTATTCTGTATGGGTTGATTTTAATGGTGATCTTGTTTTGACTGTTATGTTTGATGGATTATTTTGTGCTTGGAAATTGTCGTTGCCTCGTCTATTGACCTGCAGTTATGTAAATTCTTTGGTCCATTTATTACTGTTTTGAACTTTACGGGCTTACCTAAAAGGTAGGGAGAAGAAAAGAAGTAGAAAAACTTTTTATGCCATGGCTGGAGGCAGTTCTCTTAAGAGAAGAAGAAACTTATTCATTAACCAGCGTGGTTGTATTTTATGCATCCCCAAATTCTTCTTTTGTACGCCAATTAATGAAACATTGTCACATCAATTTATAATTAAGGATTTCATGGTCCAATTGTTGATGGTGACAGGGAATTTTAAGTTACTGTGTTGTGTGCTGAATTTTAAGTTTTAACAATATAAAGGCTGCCCATAATTTTGCAGTGTTCTCCCATAAGTTGGGCTCAATGGCGTCAGTTTCTAGTCAGCCACAGTTCCGCTATACCCAACCACCGTCGAAGGTTCTCCACTTGAGGAATTTACCTTGGGAATGCACTGAGGAGGAACTGATTGAACTGGGAAAGCCATTTGGAAAAGTTGTGAACACAAAATGTAATGTTGGAGCAAATAGAAATCAAGCTTTTATTGAGTTTGTAAGTGCAGTATTTTCTCATATATTGTTTTCCATCTTCAATAGACCTCGCTAGCTAGTCATTATGATAATATTTGACCAAGTTTAAAATAACAGGCAGACATAAATCAAGCTATTGCCATGATATCATATTATGCATCGTCCTCAGAGCCTGCTCAAGTTAGAGGAAAAACTGTTTATCTGCAGTATTCTAACCGGCAAGAAATTGTGAACAACAAAACTACAGCCGATGTTCCTGGAAATGTGCTTTTGGTAACAATTGAGGGCACTGATGCACGTCTTGTCAGCATTGATGTTTTGCACTTGGTAAGCAGATTGTAATACATTCTTGTTGCAGTTAAAGGTGAACCTCTGTGGCACTAAGATTAAATTATGGTGATTAGGTTATAGTTTGTCATGTTTCAAAAGCTTTTGTTTGACATGAATGTAAATGAATCAGCAGGCCCTTGTCAAGGCAATATCTTTGATGGCAGCTTAGTGCATCGGGAGAAAGAGCACATGTGTGTTTGTCTCCTTTCTCCTTTTCTTAACACTACCTCTCTCTTCCCTTCTCTTCTTCCTCAACTTCCTCCTACCTTTCACAGTTTAGGATATTATCATTTCTGCTCTCTTGTGCATCCTTCTCCCTATCATCTCTGCATATTGTGTCAGTGATACTACTGTCTAAATCCAGTCATTAGATTCAGAGTATAGGAATTTTTTATTCTAAATTTTTGGATGATCTGTTTTCAGTATATTAGTATTCTGCCCTAATGGACAAACATTTGAAAATTTAGTTGGAAGATTAATAAGATGATATTCCTTATGGCTTAGCATCTGAATTTTATGGGGTGACTTTGCCTTCTCTTTTGACAATTATAGGACAAGTGTTAAATATTAGGGGCTTAACAGCTTATTTCATTGATGATCATTTTGAGGATAGATTATAGCTGTAGATTGTAATTAATTTCGAACCAAGAGTTGCTCTTTCCTCAAGTGAGAGAGTCAGGTGTTACTGACTTGTTTTGGATTTGTGTTTTTGCTTTATCATATCTTCTCGCTTAGAGGAATTGGAATGTAATTCTTGATGTTTGATTGCCACATACCATTATGTGTTTTAATCTGTCCTATTATTCAATATATATGTTATATGTTATTCTTGAAAAAAGTCCACCATAGGTTCTTCATTTACTCTTGGTCCTGGCAGTAGCATTGCAACAATAATTTTCAATAGTTTTAACTTTCAGTTTTTTGTTGTAGAAATTAGAATTTGTATTTAAATGTTCAATGTTTGTTAGTTGAAGCTATCTATTGAGACATCCTACTATCTATGTTTGGAGATTTAGGTATATCTGCTTTGGTTATGATTGTAAAATAGTTCGCATGATAGTAGTCATCTAATAGGTGTTGTGATATCCTGACAATGTGATGAATGGTGTGATATCATTTGGTCTAATTGCATTCTGAAGGTTATCTAATATTTTGCAGGTCTTTTCAGCCTTTGGGTTTGTGCATAAAATTACTACCTTTGAGAAAACAGCTGGATTTCAGGTTCGTAAATATTTATAAATTATAATTTTAGTAGCAGTTGCACTATTATTACTTCTGAGCTTAGAGAAAATCTTATTCAGCTAACGATGTGAACATTTTAGGCGTTGGTGCAATTTTCAGATGCAGAGACTGCCTCATCTGCTAAGAATGCATTGGATGGGAGAAGCATCCCTAGGTGACAATTGTAGTGAATATTTCGCATGGTTTTTTGCCCCTTTTATGGAGTATAAAGCAGTAGAAGAGGTGCACATGTGCACTAGCTTGGTGTCTGTCTATGATTATATTGTTCTCAATAGTCAAAGCACTGTAAAATATTGACTTTAAATTTTTTATTCCATTGCCAGTAGTGTTCAACCTTTTCACGTAGAGGGATGCTATATTTAACTAATGTGTATGATTGAAGAGCTGAGTTTTAAATTCTCGCATGTCATTATACAAGTCTACATGTATCATCAATTATTTCTTATTTCAGTTTGGTATCTGTTTGCAGATATCTGCTTCCCGATCATGTTGGACCTTGTTCCCTTAGAATTACGTACTCTGCCCACACGGATTTGACTGTGAAATTTCAGAGCCATCGAAGCAGGTTTTCTCAACTTTCTGTGTGTAGTCTGCTATGAATGTGTTTATGTTGACTTAGGTGTAACATTTCTTAATATCTAATACAATTCTTGTTATTATTTGCTATTTACCTTATGCTAAAATATTGGTTCACCATCTCTTGGTAACTTTAGCGTCTGTTTTATCACTATCTCTCTCTCTCTCTCTCTACTTTCTGATAGTGTGTTGATTCAGGGACTACACTAATCCTTATCTTCCAGTTGCTCCATCGGCCATAGATGGAAGTGGTCAGGTAAGGAATGCATTAGGTGGCATGTTGTTAAGTTGTGCCCATAAATTTTCTCCTTTCCATGCATCCTACGTGTGTGATAAAGAAATTGCTTCAAATGTTGTCAAAAAAAAAAGAAAAGAAAAGAAAAGAAAAGAGAGAGAATAAGATAAAGATTCAAATGATGTACTTTTCACGAAAGTGCTGGCTTATTATTACAAATCTTGGCATTTCTTCCTTATCTTCTTGTTTCTTATATTATTTTTCTAAATCTTTTTCATCCTTTGATTGAATTTGTCGTCAGTCACCTTTGCAGTTCACCGTGGGTTTGGATGGAAAGAAGCTTGAACCAGAGAGTAATGTTCTTCTTGCCTCCATTGAGAATATGCAGTATGCAGTCACCTTGGAGGTTTTGCACATGGTATTACTTGATATGGAAATTTTATAGTGATTTTGTTTGTGGACTTCAGAAGCATATATAGAATATATTGAATGACTACTAATGCATGTCTTTTAATTCTTTGCAAACTAGTTTATTATGCTAGCCAATTCTTTTTTTTGTTGGTAGGTTTTTTCTGCATTTGGACCTGTCCAAAAGATTGCAATGTTTGATAAGAATGGGGGAGTGCAGGCCTTGATTCAATATCCAGGTAGCGCAATTAACTGAATTCATGCTTGCACTAACATGATAGCAATCGCTTGTTTTAAGAAATGGTTAAAGCATATTATCTACCGTTTATAACATGATAGCAACCATATCCTATCCTAAGTTCGAAAGGGGTTTTAATTTCAAATCTGTGAACAAGCTAGAAGCTTAGATGGGGAGAATTATAACTTTGTTCGATATGAGTAAAAGTAATAAGATGGACATGGCAAGGTATATAATATAGTTCAATTTTTCAATCTACATTCATATTATTTCAATAAAACTATGTAGAGCATGGTAATCAGTAATATGCCACGTGTGGACAGATGTTCAGACTGCGGTAGTTGCCAAGGAAGCCCTGGAGGGACACTGTATTTATGATGGAGGGTTTTGCAAGCTTCACATCTCATATTCACGCCACACTGATTTGAGTATTAAGGTAATAAAAACTTCATTCGTGTGGTGAAATGTCCAAGAATAATTAGACACTAAATGTCACTTTACAGAGGATGATGACTGTTTTTACTTCAAAAACTGTTCTTTGTGGCCTCATTATCAATCATGAAGATCTTTTTTTTTTCAAAAAAAAAAAAAAAGAATTAGAATTAGAATTAGAATACAAGTAATGCTCTTATTCTCTGCTCAGGACTAAAAGAATGTGGACATTGATTCTTCTCTCTATCTCTTCTGATGCAATCTGATTGATTATATTGAAGATGAATGTTCCTAAGCATCTTGTTTGTTGTGATCGTCATAGGTGAATAATGACCGAAGTCGAGACTACACAATTCCCAACACTCCTCCCATGGTGAATTCTCAACCGCCTGTTGTGGGGCAGCAGCAATCAGTTCAAATGATGGGTCCTTCCACTCATCAATACAATGGAAACCAGTATGGTCCTTCCGCAGAGCAGCCTGGAGTGCAGCCTCAGCCTTCTTCAGGGTGGGGATCGGGTGGTGGTCCAGCTGCGCCTTACTCCATGCCCATGCACAATCCTGCCTATATGCCGTCGGGGACAATGCCGCCTCAGATGGCTCCAGGTATGATGCCAAGCCCCAGTGGTTTACACCAGACACCACCACCACCCTATCGCCCCGATCACAGGCAATAGCATATATTTTCTTCGTTTAATAGTTGAATGTCCATTCAAGAAAACCAACCAAGCTTCTTAAAAATACTAGAGCATCAAATTTGGCAGAGGAAAATGTGCATTAAATTCAACAGTTACGTGAACTCTCTCCATGTTCAGAATGAATTAGGTCAGTTTTTGTTCATTTCCCTTTTATTTTAAGGGATTTGAATGAATGTAAGATCCCAAGTGCGAAAAACTGAGCACCTTTCTTTGAAGCTAAGTGACTTACAAAACTCAGTTATTATTGATGATTGTCTTCAGATACTTGATTACTGTTTTTATTAGTCTCTTCCTTCTGCTGATTATCATTATTTCTATAATTACCCCCCCCCCCCC

mRNA sequence

ATGGCATTGCGATATTGCTTGAATGGCTGGATTGATCTCTCAGTGTTCTCCCATAAGTTGGGCTCAATGGCGTCAGTTTCTAGTCAGCCACAGTTCCGCTATACCCAACCACCGTCGAAGGTTCTCCACTTGAGGAATTTACCTTGGGAATGCACTGAGGAGGAACTGATTGAACTGGGAAAGCCATTTGGAAAAGTTGTGAACACAAAATGTAATGTTGGAGCAAATAGAAATCAAGCTTTTATTGAGTTTGCAGACATAAATCAAGCTATTGCCATGATATCATATTATGCATCGTCCTCAGAGCCTGCTCAAGTTAGAGGAAAAACTGTTTATCTGCAGTATTCTAACCGGCAAGAAATTGTGAACAACAAAACTACAGCCGATGTTCCTGGAAATGTGCTTTTGGTAACAATTGAGGGCACTGATGCACGTCTTGTCAGCATTGATGTTTTGCACTTGGTCTTTTCAGCCTTTGGGTTTGTGCATAAAATTACTACCTTTGAGAAAACAGCTGGATTTCAGGCGTTGGTGCAATTTTCAGATGCAGAGACTGCCTCATCTGCTAAGAATGCATTGGATGGGAGAAGCATCCCTAGATATCTGCTTCCCGATCATGTTGGACCTTGTTCCCTTAGAATTACGTACTCTGCCCACACGGATTTGACTGTGAAATTTCAGAGCCATCGAAGCAGGGACTACACTAATCCTTATCTTCCAGTTGCTCCATCGGCCATAGATGGAAGTGGTCAGTTCACCGTGGGTTTGGATGGAAAGAAGCTTGAACCAGAGAGTAATGTTCTTCTTGCCTCCATTGAGAATATGCAGTATGCAGTCACCTTGGAGGTTTTGCACATGGTTTTTTCTGCATTTGGACCTGTCCAAAAGATTGCAATGTTTGATAAGAATGGGGGAGTGCAGGCCTTGATTCAATATCCAGATGTTCAGACTGCGGTAGTTGCCAAGGAAGCCCTGGAGGGACACTGTATTTATGATGGAGGGTTTTGCAAGCTTCACATCTCATATTCACGCCACACTGATTTGAGTATTAAGGTGAATAATGACCGAAGTCGAGACTACACAATTCCCAACACTCCTCCCATGGTGAATTCTCAACCGCCTGTTGTGGGGCAGCAGCAATCAGTTCAAATGATGGGTCCTTCCACTCATCAATACAATGGAAACCAGTATGGTCCTTCCGCAGAGCAGCCTGGAGTGCAGCCTCAGCCTTCTTCAGGGTGGGGATCGGGTGGTGGTCCAGCTGCGCCTTACTCCATGCCCATGCACAATCCTGCCTATATGCCGTCGGGGACAATGCCGCCTCAGATGGCTCCAGGTATGATGCCAAGCCCCAGTGGTTTACACCAGACACCACCACCACCCTATCGCCCCGATCACAGGCAATAG

Coding sequence (CDS)

ATGGCATTGCGATATTGCTTGAATGGCTGGATTGATCTCTCAGTGTTCTCCCATAAGTTGGGCTCAATGGCGTCAGTTTCTAGTCAGCCACAGTTCCGCTATACCCAACCACCGTCGAAGGTTCTCCACTTGAGGAATTTACCTTGGGAATGCACTGAGGAGGAACTGATTGAACTGGGAAAGCCATTTGGAAAAGTTGTGAACACAAAATGTAATGTTGGAGCAAATAGAAATCAAGCTTTTATTGAGTTTGCAGACATAAATCAAGCTATTGCCATGATATCATATTATGCATCGTCCTCAGAGCCTGCTCAAGTTAGAGGAAAAACTGTTTATCTGCAGTATTCTAACCGGCAAGAAATTGTGAACAACAAAACTACAGCCGATGTTCCTGGAAATGTGCTTTTGGTAACAATTGAGGGCACTGATGCACGTCTTGTCAGCATTGATGTTTTGCACTTGGTCTTTTCAGCCTTTGGGTTTGTGCATAAAATTACTACCTTTGAGAAAACAGCTGGATTTCAGGCGTTGGTGCAATTTTCAGATGCAGAGACTGCCTCATCTGCTAAGAATGCATTGGATGGGAGAAGCATCCCTAGATATCTGCTTCCCGATCATGTTGGACCTTGTTCCCTTAGAATTACGTACTCTGCCCACACGGATTTGACTGTGAAATTTCAGAGCCATCGAAGCAGGGACTACACTAATCCTTATCTTCCAGTTGCTCCATCGGCCATAGATGGAAGTGGTCAGTTCACCGTGGGTTTGGATGGAAAGAAGCTTGAACCAGAGAGTAATGTTCTTCTTGCCTCCATTGAGAATATGCAGTATGCAGTCACCTTGGAGGTTTTGCACATGGTTTTTTCTGCATTTGGACCTGTCCAAAAGATTGCAATGTTTGATAAGAATGGGGGAGTGCAGGCCTTGATTCAATATCCAGATGTTCAGACTGCGGTAGTTGCCAAGGAAGCCCTGGAGGGACACTGTATTTATGATGGAGGGTTTTGCAAGCTTCACATCTCATATTCACGCCACACTGATTTGAGTATTAAGGTGAATAATGACCGAAGTCGAGACTACACAATTCCCAACACTCCTCCCATGGTGAATTCTCAACCGCCTGTTGTGGGGCAGCAGCAATCAGTTCAAATGATGGGTCCTTCCACTCATCAATACAATGGAAACCAGTATGGTCCTTCCGCAGAGCAGCCTGGAGTGCAGCCTCAGCCTTCTTCAGGGTGGGGATCGGGTGGTGGTCCAGCTGCGCCTTACTCCATGCCCATGCACAATCCTGCCTATATGCCGTCGGGGACAATGCCGCCTCAGATGGCTCCAGGTATGATGCCAAGCCCCAGTGGTTTACACCAGACACCACCACCACCCTATCGCCCCGATCACAGGCAATAG

Protein sequence

MALRYCLNGWIDLSVFSHKLGSMASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFIEFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGTDARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYLLPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGLDGKKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNTPPMVNSQPPVVGQQQSVQMMGPSTHQYNGNQYGPSAEQPGVQPQPSSGWGSGGGPAAPYSMPMHNPAYMPSGTMPPQMAPGMMPSPSGLHQTPPPPYRPDHRQ

Homology

[Close]

BLAST of Spg038877 vs. NCBI nr
Match: XP_023550949.1 (polypyrimidine tract-binding protein homolog 2 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 869.4 bits (2245), Expect = 1.4e-248
Identity = 438/446 (98.21%), Postives = 440/446 (98.65%), Query Frame = 0


Query: 23  MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 82
           MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI
Sbjct: 1   MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60

Query: 83  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 142
           EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT
Sbjct: 61  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 120

Query: 143 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 202
           DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL
Sbjct: 121 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 180

Query: 203 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGLDGKKLE 262
           LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGLDGKK+E
Sbjct: 181 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGLDGKKIE 240

Query: 263 PESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAK 322
           PESNVLLASIENMQYAVTLEVLHMVFS+FGPVQKIAMFDKNGGVQALIQYPDVQTAVVAK
Sbjct: 241 PESNVLLASIENMQYAVTLEVLHMVFSSFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAK 300

Query: 323 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNTPPMVNSQPPVVGQQQSV 382
           EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNTP MVNSQPPVVGQQ   
Sbjct: 301 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNTPSMVNSQPPVVGQQPG- 360

Query: 383 QMMGPSTHQYNGNQYGPSAEQPGVQPQPSSGWGSGGGPAAPYSMPMHNPAYMPSGTMPPQ 442
           QMMGPSTHQYNGNQYGPSAEQPGVQPQPSSGWGS GGPAAPYSMPMHNPAYM SGTMPPQ
Sbjct: 361 QMMGPSTHQYNGNQYGPSAEQPGVQPQPSSGWGS-GGPAAPYSMPMHNPAYMSSGTMPPQ 420

Query: 443 MAPGMMPSPSGLHQTPPPPYRPDHRQ 469
           MAPGMMPSPSGLHQTPPPPYRPDHRQ
Sbjct: 421 MAPGMMPSPSGLHQTPPPPYRPDHRQ 444

[Close]

BLAST of Spg038877 vs. NCBI nr
Match: XP_022973041.1 (polypyrimidine tract-binding protein homolog 2-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 867.1 bits (2239), Expect = 7.0e-248
Identity = 437/446 (97.98%), Postives = 439/446 (98.43%), Query Frame = 0


Query: 23  MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 82
           MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI
Sbjct: 1   MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60

Query: 83  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 142
           EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT
Sbjct: 61  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 120

Query: 143 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 202
           DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL
Sbjct: 121 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 180

Query: 203 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGLDGKKLE 262
           LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGLDGKK+E
Sbjct: 181 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGLDGKKIE 240

Query: 263 PESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAK 322
           PESNVLLASIENMQYAVTLEVLHMVFS+FGPVQKIAMFDKNGGVQALIQYPDVQTAVVAK
Sbjct: 241 PESNVLLASIENMQYAVTLEVLHMVFSSFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAK 300

Query: 323 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNTPPMVNSQPPVVGQQQSV 382
           EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNTP MVNSQPPVVGQQ   
Sbjct: 301 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNTPSMVNSQPPVVGQQPG- 360

Query: 383 QMMGPSTHQYNGNQYGPSAEQPGVQPQPSSGWGSGGGPAAPYSMPMHNPAYMPSGTMPPQ 442
           QMMGPSTHQYNGNQY PSAEQPGVQPQPSSGWGS GGPAAPYSMPMHNPAYM SGTMPPQ
Sbjct: 361 QMMGPSTHQYNGNQYSPSAEQPGVQPQPSSGWGS-GGPAAPYSMPMHNPAYMSSGTMPPQ 420

Query: 443 MAPGMMPSPSGLHQTPPPPYRPDHRQ 469
           MAPGMMPSPSGLHQTPPPPYRPDHRQ
Sbjct: 421 MAPGMMPSPSGLHQTPPPPYRPDHRQ 444

[Close]

BLAST of Spg038877 vs. NCBI nr
Match: XP_023550948.1 (polypyrimidine tract-binding protein homolog 2 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 863.6 bits (2230), Expect = 7.8e-247
Identity = 438/450 (97.33%), Postives = 440/450 (97.78%), Query Frame = 0


Query: 23  MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 82
           MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI
Sbjct: 1   MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60

Query: 83  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 142
           EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT
Sbjct: 61  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 120

Query: 143 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 202
           DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL
Sbjct: 121 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 180

Query: 203 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSG----QFTVGLDG 262
           LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSG    QFTVGLDG
Sbjct: 181 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQSPLQFTVGLDG 240

Query: 263 KKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTA 322
           KK+EPESNVLLASIENMQYAVTLEVLHMVFS+FGPVQKIAMFDKNGGVQALIQYPDVQTA
Sbjct: 241 KKIEPESNVLLASIENMQYAVTLEVLHMVFSSFGPVQKIAMFDKNGGVQALIQYPDVQTA 300

Query: 323 VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNTPPMVNSQPPVVGQ 382
           VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNTP MVNSQPPVVGQ
Sbjct: 301 VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNTPSMVNSQPPVVGQ 360

Query: 383 QQSVQMMGPSTHQYNGNQYGPSAEQPGVQPQPSSGWGSGGGPAAPYSMPMHNPAYMPSGT 442
           Q   QMMGPSTHQYNGNQYGPSAEQPGVQPQPSSGWGS GGPAAPYSMPMHNPAYM SGT
Sbjct: 361 QPG-QMMGPSTHQYNGNQYGPSAEQPGVQPQPSSGWGS-GGPAAPYSMPMHNPAYMSSGT 420

Query: 443 MPPQMAPGMMPSPSGLHQTPPPPYRPDHRQ 469
           MPPQMAPGMMPSPSGLHQTPPPPYRPDHRQ
Sbjct: 421 MPPQMAPGMMPSPSGLHQTPPPPYRPDHRQ 448

[Close]

BLAST of Spg038877 vs. NCBI nr
Match: KAG6579328.1 (Polypyrimidine tract-binding protein-like 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 863.2 bits (2229), Expect = 1.0e-246
Identity = 437/450 (97.11%), Postives = 440/450 (97.78%), Query Frame = 0


Query: 23  MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 82
           MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI
Sbjct: 1   MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60

Query: 83  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 142
           EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT
Sbjct: 61  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 120

Query: 143 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 202
           DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL
Sbjct: 121 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 180

Query: 203 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSG----QFTVGLDG 262
           LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSG    QFTVGLDG
Sbjct: 181 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQSPLQFTVGLDG 240

Query: 263 KKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTA 322
           KK+EPESNVLLASIENMQYAVTLEVLHMVFS+FGPVQKIAMFDKNGGVQALIQYPDVQTA
Sbjct: 241 KKIEPESNVLLASIENMQYAVTLEVLHMVFSSFGPVQKIAMFDKNGGVQALIQYPDVQTA 300

Query: 323 VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNTPPMVNSQPPVVGQ 382
           +VAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNTP MVNSQPPVVGQ
Sbjct: 301 IVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNTPSMVNSQPPVVGQ 360

Query: 383 QQSVQMMGPSTHQYNGNQYGPSAEQPGVQPQPSSGWGSGGGPAAPYSMPMHNPAYMPSGT 442
           Q   QMMGPSTHQYNGNQYGPSAEQPGVQPQPSSGWGS GGPAAPYSMPMHNPAYM SGT
Sbjct: 361 QPG-QMMGPSTHQYNGNQYGPSAEQPGVQPQPSSGWGS-GGPAAPYSMPMHNPAYMSSGT 420

Query: 443 MPPQMAPGMMPSPSGLHQTPPPPYRPDHRQ 469
           MPPQMAPGMMPSPSGLHQTPPPPYRPDHRQ
Sbjct: 421 MPPQMAPGMMPSPSGLHQTPPPPYRPDHRQ 448

[Close]

BLAST of Spg038877 vs. NCBI nr
Match: XP_022973039.1 (polypyrimidine tract-binding protein homolog 2-like isoform X1 [Cucurbita maxima] >XP_022973040.1 polypyrimidine tract-binding protein homolog 2-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 861.3 bits (2224), Expect = 3.9e-246
Identity = 437/450 (97.11%), Postives = 439/450 (97.56%), Query Frame = 0


Query: 23  MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 82
           MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI
Sbjct: 1   MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60

Query: 83  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 142
           EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT
Sbjct: 61  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 120

Query: 143 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 202
           DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL
Sbjct: 121 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 180

Query: 203 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSG----QFTVGLDG 262
           LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSG    QFTVGLDG
Sbjct: 181 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQSPLQFTVGLDG 240

Query: 263 KKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTA 322
           KK+EPESNVLLASIENMQYAVTLEVLHMVFS+FGPVQKIAMFDKNGGVQALIQYPDVQTA
Sbjct: 241 KKIEPESNVLLASIENMQYAVTLEVLHMVFSSFGPVQKIAMFDKNGGVQALIQYPDVQTA 300

Query: 323 VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNTPPMVNSQPPVVGQ 382
           VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNTP MVNSQPPVVGQ
Sbjct: 301 VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNTPSMVNSQPPVVGQ 360

Query: 383 QQSVQMMGPSTHQYNGNQYGPSAEQPGVQPQPSSGWGSGGGPAAPYSMPMHNPAYMPSGT 442
           Q   QMMGPSTHQYNGNQY PSAEQPGVQPQPSSGWGS GGPAAPYSMPMHNPAYM SGT
Sbjct: 361 QPG-QMMGPSTHQYNGNQYSPSAEQPGVQPQPSSGWGS-GGPAAPYSMPMHNPAYMSSGT 420

Query: 443 MPPQMAPGMMPSPSGLHQTPPPPYRPDHRQ 469
           MPPQMAPGMMPSPSGLHQTPPPPYRPDHRQ
Sbjct: 421 MPPQMAPGMMPSPSGLHQTPPPPYRPDHRQ 448

[Close]

BLAST of Spg038877 vs. ExPASy Swiss-Prot
Match: Q9FGL9 (Polypyrimidine tract-binding protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At5g53180 PE=1 SV=1)

HSP 1 Score: 642.5 bits (1656), Expect = 3.7e-183
Identity = 345/433 (79.68%), Postives = 362/433 (83.60%), Query Frame = 0


Query: 23  MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 82
           M+SVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFG VVNTKCNVGANRNQAFI
Sbjct: 1   MSSVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGTVVNTKCNVGANRNQAFI 60

Query: 83  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 142
           EF D+NQAI MISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADV GNVLLVTIEG 
Sbjct: 61  EFEDLNQAIQMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVVGNVLLVTIEGD 120

Query: 143 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 202
           DAR+VSIDVLHLVFSAFGFVHKITTFEKTAG+QALVQF+DAETA++AK ALDGRSIPRYL
Sbjct: 121 DARMVSIDVLHLVFSAFGFVHKITTFEKTAGYQALVQFTDAETATAAKLALDGRSIPRYL 180

Query: 203 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGLDGKKLE 262
           L + VG CSL+ITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAID +GQ  VG+DGKK+E
Sbjct: 181 LAETVGQCSLKITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDSTGQVAVGVDGKKME 240

Query: 263 PESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAK 322
           PESNVLLASIENMQYAVTL+VLHMVF+AFG VQKIAMFDKNGGVQALIQY DVQTAVVAK
Sbjct: 241 PESNVLLASIENMQYAVTLDVLHMVFAAFGEVQKIAMFDKNGGVQALIQYSDVQTAVVAK 300

Query: 323 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNTPPMVNSQP---PVVGQQ 382
           EALEGHCIYDGGFCKLHI+YSRHTDLSIKVNNDRSRDYT+PN P  +  QP   P  G  
Sbjct: 301 EALEGHCIYDGGFCKLHITYSRHTDLSIKVNNDRSRDYTMPNPPVPMPQQPVQNPYAGNP 360

Query: 383 QSVQMMGPSTHQYNGNQYGPSAEQPGVQPQPSSGWGSGGG---PAAPYSMPMHNPAYMPS 442
           Q     G S HQ      G    QPG   Q S G G GG     A P S  MH     P 
Sbjct: 361 QQYHAAGGSHHQQQQQPQG-GWVQPG--GQGSMGMGGGGHNHYMAPPSSSSMHQG---PG 420

Query: 443 GTMPPQMAPGMMP 450
           G MPPQ   G  P
Sbjct: 421 GHMPPQHYGGPGP 427

[Close]

BLAST of Spg038877 vs. ExPASy Swiss-Prot
Match: Q9MAC5 (Polypyrimidine tract-binding protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=PTB PE=1 SV=1)

HSP 1 Score: 538.1 bits (1385), Expect = 9.8e-152
Identity = 270/390 (69.23%), Postives = 316/390 (81.03%), Query Frame = 0


Query: 25  SVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFIEF 84
           S S Q QFRYTQ PSKV+HLRNLPWEC EEELI+L K FGK+VNTK NVGANRNQAF+EF
Sbjct: 2   SSSGQTQFRYTQTPSKVVHLRNLPWECVEEELIDLCKRFGKIVNTKSNVGANRNQAFVEF 61

Query: 85  ADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGTDA 144
           AD+NQAI+M+SYYASSSEPAQ+RGKTVY+QYSNR EIVNN++  DVPGNVLLVT EG ++
Sbjct: 62  ADLNQAISMVSYYASSSEPAQIRGKTVYIQYSNRHEIVNNQSPGDVPGNVLLVTFEGVES 121

Query: 145 RLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYLLP 204
             VSIDV+HLVFSAFGFVHKI TFEK AGFQALVQF+D ETAS+A++ALDGRSIPRYLL 
Sbjct: 122 HEVSIDVIHLVFSAFGFVHKIATFEKAAGFQALVQFTDVETASAARSALDGRSIPRYLLS 181

Query: 205 DHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGLDGKKLEPE 264
            HVG CSLR++YSAHTDL +KFQSHRSRDYTNPYLPV  +A+DGS Q  +G DGKK+E +
Sbjct: 182 AHVGSCSLRMSYSAHTDLNIKFQSHRSRDYTNPYLPVNQTAMDGSMQPALGADGKKVESQ 241

Query: 265 SNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAKEA 324
           SNVLL  IENMQYAVT++VLH VFSA+G VQKIA+F+KNG  QALIQY D+ TA +AKEA
Sbjct: 242 SNVLLGLIENMQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYSDIPTAAMAKEA 301

Query: 325 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNTPPMVNSQPPVV-GQQQSVQ 384
           LEGHCIYDGG+CKL +SYSRHTDL++K  +D+SRDYT+P+   +V  + P V G      
Sbjct: 302 LEGHCIYDGGYCKLRLSYSRHTDLNVKAFSDKSRDYTLPDLSLLVAQKGPAVSGSAPPAG 361

Query: 385 MMGPSTHQ----YNGNQY-GPSAEQPGVQP 409
              P        Y G+ Y  PS++  G  P
Sbjct: 362 WQNPQAQSQYSGYGGSPYMYPSSDPNGASP 391

[Close]

BLAST of Spg038877 vs. ExPASy Swiss-Prot
Match: Q6ICX4 (Polypyrimidine tract-binding protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g43190 PE=2 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 3.4e-35
Identity = 113/354 (31.92%), Postives = 189/354 (53.39%), Query Frame = 0


Query: 39  SKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFIEFADINQAIAMISYYA 98
           SKV+H+RN+  E +E +L++L +PFG  V TK  +   +NQA ++  D++ A++ + ++ 
Sbjct: 5   SKVVHVRNVGHEISENDLLQLFQPFG--VITKLVMLRAKNQALLQMQDVSSAVSALQFF- 64

Query: 99  SSSEPAQVRGKTVYLQYSNRQEIV----NNKTTADVPGNVLLVTIEGTDARLVSIDVLHL 158
           ++ +P  +RG+ VY+Q+S+ QE+     N     D P  +LLVTI       +++DVLH 
Sbjct: 65  TNVQPT-IRGRNVYVQFSSHQELTTIEQNIHGREDEPNRILLVTIHHM-LYPITVDVLHQ 124

Query: 159 VFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYLLPDHVGPCSLRI 218
           VFS +GFV K+ TF+K+AGFQAL+Q+   + A+SA+ AL GR+I       + G C L I
Sbjct: 125 VFSPYGFVEKLVTFQKSAGFQALIQYQVQQCAASARTALQGRNI-------YDGCCQLDI 184

Query: 219 TYSAHTDLTVKFQSHRSRDYTNPYLPVA----------------------PSAIDGS--G 278
            +S   +L V + + RSRDYTNP LP                         SAI  +  G
Sbjct: 185 QFSNLEELQVNYNNDRSRDYTNPNLPAEQKGRSSHPCYGDTGVAYPQMANTSAIAAAFGG 244

Query: 279 QFTVGLDGKKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALI 338
               G+ G        VL++++     ++  + L  +FS +G + +I +  +N    AL+
Sbjct: 245 GLPPGITG--TNDRCTVLVSNLN--ADSIDEDKLFNLFSLYGNIVRIKLL-RNKPDHALV 304

Query: 339 QYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPN 365
           Q  D   A +A   L+G  ++     +L +++S+H +++   +   S DY   N
Sbjct: 305 QMGDGFQAELAVHFLKGAMLFGK---RLEVNFSKHPNITPGTD---SHDYVNSN 335

[Close]

BLAST of Spg038877 vs. ExPASy Swiss-Prot
Match: Q9UKA9 (Polypyrimidine tract-binding protein 2 OS=Homo sapiens OX=9606 GN=PTBP2 PE=1 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 1.4e-33
Identity = 123/395 (31.14%), Postives = 183/395 (46.33%), Query Frame = 0


Query: 38  PSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFIEFADINQAIAMISYY 97
           PS+VLH+R LP E TE E+I LG PFGKV N     G  +NQAF+E A    AI M++YY
Sbjct: 57  PSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKG--KNQAFLELATEEAAITMVNYY 116

Query: 98  ASSSEPAQVRGKTVYLQYSNRQEIVNNKT----------------TADVP---------- 157
             S+    +R + +Y+QYSN +E+  + T                TA+ P          
Sbjct: 117 --SAVTPHLRNQPIYIQYSNHKELKTDNTLNQRAQAVLQAVTAVQTANTPLSGTTVSESA 176

Query: 158 -----GNVLLVTIEGTDARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETA 217
                  VL + I+      V++DVLH +FS FG V KI TF K   FQAL+Q+ D   A
Sbjct: 177 VTPAQSPVLRIIIDNM-YYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNA 236

Query: 218 SSAKNALDGRSIPRYLLPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLP------ 277
             AK ALDG++I       +   C+LRI +S   +L VK+ + +SRDYT P LP      
Sbjct: 237 QQAKLALDGQNI-------YNACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQP 296

Query: 278 ----------------------VAPSAIDGSGQFT-------VGLDGKKLEPESNVLLAS 337
                                 ++P AI  +           VG+ G      + +L+++
Sbjct: 297 ALDPAIAAAFAKETSLLAVPGALSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSN 356

Query: 338 IENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAKEALEGHCIY 367
           +   +  VT + L  +F  +G VQ++ +   N    ALIQ  D   + +A   L G  +Y
Sbjct: 357 LN--EEMVTPQSLFTLFGVYGDVQRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY 416

[Close]

BLAST of Spg038877 vs. ExPASy Swiss-Prot
Match: Q91Z31 (Polypyrimidine tract-binding protein 2 OS=Mus musculus OX=10090 GN=Ptbp2 PE=1 SV=2)

HSP 1 Score: 145.6 bits (366), Expect = 1.4e-33
Identity = 123/395 (31.14%), Postives = 183/395 (46.33%), Query Frame = 0


Query: 38  PSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFIEFADINQAIAMISYY 97
           PS+VLH+R LP E TE E+I LG PFGKV N     G  +NQAF+E A    AI M++YY
Sbjct: 57  PSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKG--KNQAFLELATEEAAITMVNYY 116

Query: 98  ASSSEPAQVRGKTVYLQYSNRQEIVNNKT----------------TADVP---------- 157
             S+    +R + +Y+QYSN +E+  + T                TA+ P          
Sbjct: 117 --SAVTPHLRNQPIYIQYSNHKELKTDNTLNQRAQVVLQAVTAVQTANTPLSGTTVSESA 176

Query: 158 -----GNVLLVTIEGTDARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETA 217
                  VL + I+      V++DVLH +FS FG V KI TF K   FQAL+Q+ D   A
Sbjct: 177 VTPAQSPVLRIIIDNM-YYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNA 236

Query: 218 SSAKNALDGRSIPRYLLPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLP------ 277
             AK ALDG++I       +   C+LRI +S   +L VK+ + +SRDYT P LP      
Sbjct: 237 QQAKLALDGQNI-------YNACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQP 296

Query: 278 ----------------------VAPSAIDGSGQFT-------VGLDGKKLEPESNVLLAS 337
                                 ++P AI  +           VG+ G      + +L+++
Sbjct: 297 ALDPAIAAAFAKETSLLAVPGALSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSN 356

Query: 338 IENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAKEALEGHCIY 367
           +   +  VT + L  +F  +G VQ++ +   N    ALIQ  D   + +A   L G  +Y
Sbjct: 357 LN--EEMVTPQSLFTLFGVYGDVQRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY 416

[Close]

BLAST of Spg038877 vs. ExPASy TrEMBL
Match: A0A6J1I7L3 (polypyrimidine tract-binding protein homolog 2-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111471547 PE=4 SV=1)

HSP 1 Score: 867.1 bits (2239), Expect = 3.4e-248
Identity = 437/446 (97.98%), Postives = 439/446 (98.43%), Query Frame = 0


Query: 23  MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 82
           MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI
Sbjct: 1   MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60

Query: 83  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 142
           EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT
Sbjct: 61  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 120

Query: 143 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 202
           DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL
Sbjct: 121 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 180

Query: 203 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGLDGKKLE 262
           LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGLDGKK+E
Sbjct: 181 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGLDGKKIE 240

Query: 263 PESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAK 322
           PESNVLLASIENMQYAVTLEVLHMVFS+FGPVQKIAMFDKNGGVQALIQYPDVQTAVVAK
Sbjct: 241 PESNVLLASIENMQYAVTLEVLHMVFSSFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAK 300

Query: 323 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNTPPMVNSQPPVVGQQQSV 382
           EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNTP MVNSQPPVVGQQ   
Sbjct: 301 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNTPSMVNSQPPVVGQQPG- 360

Query: 383 QMMGPSTHQYNGNQYGPSAEQPGVQPQPSSGWGSGGGPAAPYSMPMHNPAYMPSGTMPPQ 442
           QMMGPSTHQYNGNQY PSAEQPGVQPQPSSGWGS GGPAAPYSMPMHNPAYM SGTMPPQ
Sbjct: 361 QMMGPSTHQYNGNQYSPSAEQPGVQPQPSSGWGS-GGPAAPYSMPMHNPAYMSSGTMPPQ 420

Query: 443 MAPGMMPSPSGLHQTPPPPYRPDHRQ 469
           MAPGMMPSPSGLHQTPPPPYRPDHRQ
Sbjct: 421 MAPGMMPSPSGLHQTPPPPYRPDHRQ 444

[Close]

BLAST of Spg038877 vs. ExPASy TrEMBL
Match: A0A6J1IDD4 (polypyrimidine tract-binding protein homolog 2-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471547 PE=4 SV=1)

HSP 1 Score: 861.3 bits (2224), Expect = 1.9e-246
Identity = 437/450 (97.11%), Postives = 439/450 (97.56%), Query Frame = 0


Query: 23  MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 82
           MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI
Sbjct: 1   MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60

Query: 83  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 142
           EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT
Sbjct: 61  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 120

Query: 143 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 202
           DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL
Sbjct: 121 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 180

Query: 203 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSG----QFTVGLDG 262
           LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSG    QFTVGLDG
Sbjct: 181 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQSPLQFTVGLDG 240

Query: 263 KKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTA 322
           KK+EPESNVLLASIENMQYAVTLEVLHMVFS+FGPVQKIAMFDKNGGVQALIQYPDVQTA
Sbjct: 241 KKIEPESNVLLASIENMQYAVTLEVLHMVFSSFGPVQKIAMFDKNGGVQALIQYPDVQTA 300

Query: 323 VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNTPPMVNSQPPVVGQ 382
           VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNTP MVNSQPPVVGQ
Sbjct: 301 VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNTPSMVNSQPPVVGQ 360

Query: 383 QQSVQMMGPSTHQYNGNQYGPSAEQPGVQPQPSSGWGSGGGPAAPYSMPMHNPAYMPSGT 442
           Q   QMMGPSTHQYNGNQY PSAEQPGVQPQPSSGWGS GGPAAPYSMPMHNPAYM SGT
Sbjct: 361 QPG-QMMGPSTHQYNGNQYSPSAEQPGVQPQPSSGWGS-GGPAAPYSMPMHNPAYMSSGT 420

Query: 443 MPPQMAPGMMPSPSGLHQTPPPPYRPDHRQ 469
           MPPQMAPGMMPSPSGLHQTPPPPYRPDHRQ
Sbjct: 421 MPPQMAPGMMPSPSGLHQTPPPPYRPDHRQ 448

[Close]

BLAST of Spg038877 vs. ExPASy TrEMBL
Match: A0A6J1E303 (polypyrimidine tract-binding protein homolog 2 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430366 PE=4 SV=1)

HSP 1 Score: 860.1 bits (2221), Expect = 4.2e-246
Identity = 436/446 (97.76%), Postives = 438/446 (98.21%), Query Frame = 0


Query: 23  MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 82
           MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI
Sbjct: 1   MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60

Query: 83  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 142
           EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT
Sbjct: 61  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 120

Query: 143 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 202
           DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL
Sbjct: 121 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 180

Query: 203 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGLDGKKLE 262
           LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGLDGKK+E
Sbjct: 181 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGLDGKKIE 240

Query: 263 PESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAK 322
           PESNVLLASIENMQYAVTLEVLHMVFS+FGPVQKIAMFDKNGGVQALIQYPDVQTAVVAK
Sbjct: 241 PESNVLLASIENMQYAVTLEVLHMVFSSFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAK 300

Query: 323 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNTPPMVNSQPPVVGQQQSV 382
           EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNTP MVNSQPPVVGQQ   
Sbjct: 301 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNTPSMVNSQPPVVGQQPG- 360

Query: 383 QMMGPSTHQYNGNQYGPSAEQPGVQPQPSSGWGSGGGPAAPYSMPMHNPAYMPSGTMPPQ 442
           QMMGPSTHQYNGNQYGPSAEQPGVQPQPSSGWGS GGPAAPYSMPMHNPAYM SGTMPPQ
Sbjct: 361 QMMGPSTHQYNGNQYGPSAEQPGVQPQPSSGWGS-GGPAAPYSMPMHNPAYMSSGTMPPQ 420

Query: 443 MAPGMMPSPSGLHQTPPPPYRPDHRQ 469
           MAPGMMPSPSGLHQT PPPYRP HRQ
Sbjct: 421 MAPGMMPSPSGLHQT-PPPYRPHHRQ 443

[Close]

BLAST of Spg038877 vs. ExPASy TrEMBL
Match: A0A1S3AUZ4 (LOW QUALITY PROTEIN: polypyrimidine tract-binding protein homolog 2 OS=Cucumis melo OX=3656 GN=LOC103482951 PE=4 SV=1)

HSP 1 Score: 860.1 bits (2221), Expect = 4.2e-246
Identity = 440/456 (96.49%), Postives = 441/456 (96.71%), Query Frame = 0


Query: 15  VFSHKLGSMASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVG 74
           +FS KLG MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVG
Sbjct: 298 MFSCKLGEMASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVG 357

Query: 75  ANRNQAFIEFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNV 134
           ANRNQAFIEFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNV
Sbjct: 358 ANRNQAFIEFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNV 417

Query: 135 LLVTIEGTDARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALD 194
           LLVTIEGTDARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALD
Sbjct: 418 LLVTIEGTDARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALD 477

Query: 195 GRSIPRYLLPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTV 254
           GRSIPRYLLPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTV
Sbjct: 478 GRSIPRYLLPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTV 537

Query: 255 GLDGKKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPD 314
           GLDGKKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPD
Sbjct: 538 GLDGKKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPD 597

Query: 315 VQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNTPPMVNSQPP 374
           VQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPN PPMVNSQPP
Sbjct: 598 VQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPP 657

Query: 375 VVGQQQSVQMMGPSTHQYNGNQYGPSAE-QPGVQPQPSSGWGSGGGPAAPY-SMPMHNPA 434
           VVGQQQ  QMMGPSTHQYNGNQYGPS E QPGVQP  SSGWGS GGPAAPY SMPMHNP 
Sbjct: 658 VVGQQQPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGS-GGPAAPYSSMPMHNPG 717

Query: 435 YMPSGTMPPQMAPGMMPSPSGLHQTPPPPYRPDHRQ 469
           YMPSGTMPPQ   GMMPSPSGLHQTPPPPYRPDHRQ
Sbjct: 718 YMPSGTMPPQ--HGMMPSPSGLHQTPPPPYRPDHRQ 750

[Close]

BLAST of Spg038877 vs. ExPASy TrEMBL
Match: A0A5A7TLW2 (Polypyrimidine tract-binding protein-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G00560 PE=4 SV=1)

HSP 1 Score: 857.8 bits (2215), Expect = 2.1e-245
Identity = 442/463 (95.46%), Postives = 442/463 (95.46%), Query Frame = 0


Query: 12  DLSVFSHKLGSMASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKC 71
           D  VFS KLG MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKC
Sbjct: 295 DFPVFSCKLGEMASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKC 354

Query: 72  NVGANRNQAFIEFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVP 131
           NVGANRNQAFIEFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVP
Sbjct: 355 NVGANRNQAFIEFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVP 414

Query: 132 GNVLLVTIEGTDARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKN 191
           GNVLLVTIEGTDARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKN
Sbjct: 415 GNVLLVTIEGTDARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKN 474

Query: 192 ALDGRSIPRYLLPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSG- 251
           ALDGRSIPRYLLPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSG 
Sbjct: 475 ALDGRSIPRYLLPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQ 534

Query: 252 ---QFTVGLDGKKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQ 311
              QFTVGLDGKKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQ
Sbjct: 535 SPLQFTVGLDGKKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQ 594

Query: 312 ALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNTPP 371
           ALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPN PP
Sbjct: 595 ALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPP 654

Query: 372 MVNSQPPVVGQQQSVQMMGPSTHQYNGNQYGPSAE-QPGVQPQPSSGWGSGGGPAAPY-S 431
           MVNSQPPVVGQQQ  QMMGPSTHQYNGNQYGPS E QPGVQP  SSGWGS GGPAAPY S
Sbjct: 655 MVNSQPPVVGQQQPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGS-GGPAAPYSS 714

Query: 432 MPMHNPAYMPSGTMPPQMAPGMMPSPSGLHQTPPPPYRPDHRQ 469
           MPMHNP YMPSGTMPPQ   GMMPSPSGLHQTPPPPYRPDHRQ
Sbjct: 715 MPMHNPGYMPSGTMPPQ--HGMMPSPSGLHQTPPPPYRPDHRQ 754

[Close]

BLAST of Spg038877 vs. TAIR 10
Match: AT5G53180.1 (polypyrimidine tract-binding protein 2 )

HSP 1 Score: 642.5 bits (1656), Expect = 2.6e-184
Identity = 345/433 (79.68%), Postives = 362/433 (83.60%), Query Frame = 0


Query: 23  MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 82
           M+SVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFG VVNTKCNVGANRNQAFI
Sbjct: 1   MSSVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGTVVNTKCNVGANRNQAFI 60

Query: 83  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 142
           EF D+NQAI MISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADV GNVLLVTIEG 
Sbjct: 61  EFEDLNQAIQMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVVGNVLLVTIEGD 120

Query: 143 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 202
           DAR+VSIDVLHLVFSAFGFVHKITTFEKTAG+QALVQF+DAETA++AK ALDGRSIPRYL
Sbjct: 121 DARMVSIDVLHLVFSAFGFVHKITTFEKTAGYQALVQFTDAETATAAKLALDGRSIPRYL 180

Query: 203 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGLDGKKLE 262
           L + VG CSL+ITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAID +GQ  VG+DGKK+E
Sbjct: 181 LAETVGQCSLKITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDSTGQVAVGVDGKKME 240

Query: 263 PESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAK 322
           PESNVLLASIENMQYAVTL+VLHMVF+AFG VQKIAMFDKNGGVQALIQY DVQTAVVAK
Sbjct: 241 PESNVLLASIENMQYAVTLDVLHMVFAAFGEVQKIAMFDKNGGVQALIQYSDVQTAVVAK 300

Query: 323 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNTPPMVNSQP---PVVGQQ 382
           EALEGHCIYDGGFCKLHI+YSRHTDLSIKVNNDRSRDYT+PN P  +  QP   P  G  
Sbjct: 301 EALEGHCIYDGGFCKLHITYSRHTDLSIKVNNDRSRDYTMPNPPVPMPQQPVQNPYAGNP 360

Query: 383 QSVQMMGPSTHQYNGNQYGPSAEQPGVQPQPSSGWGSGGG---PAAPYSMPMHNPAYMPS 442
           Q     G S HQ      G    QPG   Q S G G GG     A P S  MH     P 
Sbjct: 361 QQYHAAGGSHHQQQQQPQG-GWVQPG--GQGSMGMGGGGHNHYMAPPSSSSMHQG---PG 420

Query: 443 GTMPPQMAPGMMP 450
           G MPPQ   G  P
Sbjct: 421 GHMPPQHYGGPGP 427

[Close]

BLAST of Spg038877 vs. TAIR 10
Match: AT3G01150.1 (polypyrimidine tract-binding protein 1 )

HSP 1 Score: 538.1 bits (1385), Expect = 7.0e-153
Identity = 270/390 (69.23%), Postives = 316/390 (81.03%), Query Frame = 0


Query: 25  SVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFIEF 84
           S S Q QFRYTQ PSKV+HLRNLPWEC EEELI+L K FGK+VNTK NVGANRNQAF+EF
Sbjct: 2   SSSGQTQFRYTQTPSKVVHLRNLPWECVEEELIDLCKRFGKIVNTKSNVGANRNQAFVEF 61

Query: 85  ADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGTDA 144
           AD+NQAI+M+SYYASSSEPAQ+RGKTVY+QYSNR EIVNN++  DVPGNVLLVT EG ++
Sbjct: 62  ADLNQAISMVSYYASSSEPAQIRGKTVYIQYSNRHEIVNNQSPGDVPGNVLLVTFEGVES 121

Query: 145 RLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYLLP 204
             VSIDV+HLVFSAFGFVHKI TFEK AGFQALVQF+D ETAS+A++ALDGRSIPRYLL 
Sbjct: 122 HEVSIDVIHLVFSAFGFVHKIATFEKAAGFQALVQFTDVETASAARSALDGRSIPRYLLS 181

Query: 205 DHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGLDGKKLEPE 264
            HVG CSLR++YSAHTDL +KFQSHRSRDYTNPYLPV  +A+DGS Q  +G DGKK+E +
Sbjct: 182 AHVGSCSLRMSYSAHTDLNIKFQSHRSRDYTNPYLPVNQTAMDGSMQPALGADGKKVESQ 241

Query: 265 SNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAKEA 324
           SNVLL  IENMQYAVT++VLH VFSA+G VQKIA+F+KNG  QALIQY D+ TA +AKEA
Sbjct: 242 SNVLLGLIENMQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYSDIPTAAMAKEA 301

Query: 325 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNTPPMVNSQPPVV-GQQQSVQ 384
           LEGHCIYDGG+CKL +SYSRHTDL++K  +D+SRDYT+P+   +V  + P V G      
Sbjct: 302 LEGHCIYDGGYCKLRLSYSRHTDLNVKAFSDKSRDYTLPDLSLLVAQKGPAVSGSAPPAG 361

Query: 385 MMGPSTHQ----YNGNQY-GPSAEQPGVQP 409
              P        Y G+ Y  PS++  G  P
Sbjct: 362 WQNPQAQSQYSGYGGSPYMYPSSDPNGASP 391

[Close]

BLAST of Spg038877 vs. TAIR 10
Match: AT3G01150.2 (polypyrimidine tract-binding protein 1 )

HSP 1 Score: 474.6 bits (1220), Expect = 9.5e-134
Identity = 244/390 (62.56%), Postives = 290/390 (74.36%), Query Frame = 0


Query: 25  SVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFIEF 84
           S S Q QFRYTQ PSKV+HLRNLPWEC EEELI+L K FGK+VNTK NVGANRNQAF+EF
Sbjct: 2   SSSGQTQFRYTQTPSKVVHLRNLPWECVEEELIDLCKRFGKIVNTKSNVGANRNQAFVEF 61

Query: 85  ADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGTDA 144
           AD+NQAI+M+SYYASSSEPAQ+RGKTVY+QYSNR EIVNN++  DVPGNVLLVT EG ++
Sbjct: 62  ADLNQAISMVSYYASSSEPAQIRGKTVYIQYSNRHEIVNNQSPGDVPGNVLLVTFEGVES 121

Query: 145 RLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYLLP 204
                                         +ALVQF+D ETAS+A++ALDGRSIPRYLL 
Sbjct: 122 H-----------------------------EALVQFTDVETASAARSALDGRSIPRYLLS 181

Query: 205 DHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGLDGKKLEPE 264
            HVG CSLR++YSAHTDL +KFQSHRSRDYTNPYLPV  +A+DGS Q  +G DGKK+E +
Sbjct: 182 AHVGSCSLRMSYSAHTDLNIKFQSHRSRDYTNPYLPVNQTAMDGSMQPALGADGKKVESQ 241

Query: 265 SNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAKEA 324
           SNVLL  IENMQYAVT++VLH VFSA+G VQKIA+F+KNG  QALIQY D+ TA +AKEA
Sbjct: 242 SNVLLGLIENMQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYSDIPTAAMAKEA 301

Query: 325 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNTPPMVNSQPPVV-GQQQSVQ 384
           LEGHCIYDGG+CKL +SYSRHTDL++K  +D+SRDYT+P+   +V  + P V G      
Sbjct: 302 LEGHCIYDGGYCKLRLSYSRHTDLNVKAFSDKSRDYTLPDLSLLVAQKGPAVSGSAPPAG 361

Query: 385 MMGPSTHQ----YNGNQY-GPSAEQPGVQP 409
              P        Y G+ Y  PS++  G  P
Sbjct: 362 WQNPQAQSQYSGYGGSPYMYPSSDPNGASP 362

[Close]

BLAST of Spg038877 vs. TAIR 10
Match: AT5G53180.2 (polypyrimidine tract-binding protein 2 )

HSP 1 Score: 397.5 bits (1020), Expect = 1.5e-110
Identity = 221/301 (73.42%), Postives = 235/301 (78.07%), Query Frame = 0


Query: 155 VFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYLLPDHVGPCSLRI 214
           VFSAFGFVHKITTFEKTAG+QALVQF+DAETA++AK ALDGRSIPRYLL + VG CSL+I
Sbjct: 33  VFSAFGFVHKITTFEKTAGYQALVQFTDAETATAAKLALDGRSIPRYLLAETVGQCSLKI 92

Query: 215 TYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGLDGKKLEPESNVLLASIEN 274
           TYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAID +GQ  VG+DGKK+EPESNVLLASIEN
Sbjct: 93  TYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDSTGQVAVGVDGKKMEPESNVLLASIEN 152

Query: 275 MQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAKEALEGHCIYDGG 334
           MQYAVTL+VLHMVF+AFG VQKIAMFDKNGGVQALIQY DVQTAVVAKEALEGHCIYDGG
Sbjct: 153 MQYAVTLDVLHMVFAAFGEVQKIAMFDKNGGVQALIQYSDVQTAVVAKEALEGHCIYDGG 212

Query: 335 FCKLHISYSRHTDLSIKVNNDRSRDYTIPNTPPMVNSQP---PVVGQQQSVQMMGPSTHQ 394
           FCKLHI+YSRHTDLSIKVNNDRSRDYT+PN P  +  QP   P  G  Q     G S HQ
Sbjct: 213 FCKLHITYSRHTDLSIKVNNDRSRDYTMPNPPVPMPQQPVQNPYAGNPQQYHAAGGSHHQ 272

Query: 395 YNGNQYGPSAEQPGVQPQPSSGWGSGGG---PAAPYSMPMHNPAYMPSGTMPPQMAPGMM 450
                 G    QPG   Q S G G GG     A P S  MH     P G MPPQ   G  
Sbjct: 273 QQQQPQG-GWVQPG--GQGSMGMGGGGHNHYMAPPSSSSMHQG---PGGHMPPQHYGGPG 327

[Close]

BLAST of Spg038877 vs. TAIR 10
Match: AT1G43190.1 (polypyrimidine tract-binding protein 3 )

HSP 1 Score: 151.0 bits (380), Expect = 2.4e-36
Identity = 113/354 (31.92%), Postives = 189/354 (53.39%), Query Frame = 0


Query: 39  SKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFIEFADINQAIAMISYYA 98
           SKV+H+RN+  E +E +L++L +PFG  V TK  +   +NQA ++  D++ A++ + ++ 
Sbjct: 5   SKVVHVRNVGHEISENDLLQLFQPFG--VITKLVMLRAKNQALLQMQDVSSAVSALQFF- 64

Query: 99  SSSEPAQVRGKTVYLQYSNRQEIV----NNKTTADVPGNVLLVTIEGTDARLVSIDVLHL 158
           ++ +P  +RG+ VY+Q+S+ QE+     N     D P  +LLVTI       +++DVLH 
Sbjct: 65  TNVQPT-IRGRNVYVQFSSHQELTTIEQNIHGREDEPNRILLVTIHHM-LYPITVDVLHQ 124

Query: 159 VFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYLLPDHVGPCSLRI 218
           VFS +GFV K+ TF+K+AGFQAL+Q+   + A+SA+ AL GR+I       + G C L I
Sbjct: 125 VFSPYGFVEKLVTFQKSAGFQALIQYQVQQCAASARTALQGRNI-------YDGCCQLDI 184

Query: 219 TYSAHTDLTVKFQSHRSRDYTNPYLPVA----------------------PSAIDGS--G 278
            +S   +L V + + RSRDYTNP LP                         SAI  +  G
Sbjct: 185 QFSNLEELQVNYNNDRSRDYTNPNLPAEQKGRSSHPCYGDTGVAYPQMANTSAIAAAFGG 244

Query: 279 QFTVGLDGKKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALI 338
               G+ G        VL++++     ++  + L  +FS +G + +I +  +N    AL+
Sbjct: 245 GLPPGITG--TNDRCTVLVSNLN--ADSIDEDKLFNLFSLYGNIVRIKLL-RNKPDHALV 304

Query: 339 QYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPN 365
           Q  D   A +A   L+G  ++     +L +++S+H +++   +   S DY   N
Sbjct: 305 QMGDGFQAELAVHFLKGAMLFGK---RLEVNFSKHPNITPGTD---SHDYVNSN 335

The following BLAST results are available for this feature:

BLAST of Spg038877 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023550949.1	1.4e-248	98.21	polypyrimidine tract-binding protein homolog 2 isoform X2 [Cucurbita pepo subsp....	[more]
XP_022973041.1	7.0e-248	97.98	polypyrimidine tract-binding protein homolog 2-like isoform X2 [Cucurbita maxima...	[more]
XP_023550948.1	7.8e-247	97.33	polypyrimidine tract-binding protein homolog 2 isoform X1 [Cucurbita pepo subsp....	[more]
KAG6579328.1	1.0e-246	97.11	Polypyrimidine tract-binding protein-like 2, partial [Cucurbita argyrosperma sub...	[more]
XP_022973039.1	3.9e-246	97.11	polypyrimidine tract-binding protein homolog 2-like isoform X1 [Cucurbita maxima...	[more]

BLAST of Spg038877 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FGL9	3.7e-183	79.68	Polypyrimidine tract-binding protein homolog 2 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9MAC5	9.8e-152	69.23	Polypyrimidine tract-binding protein homolog 1 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q6ICX4	3.4e-35	31.92	Polypyrimidine tract-binding protein homolog 3 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9UKA9	1.4e-33	31.14	Polypyrimidine tract-binding protein 2 OS=Homo sapiens OX=9606 GN=PTBP2 PE=1 SV=...	[more]
Q91Z31	1.4e-33	31.14	Polypyrimidine tract-binding protein 2 OS=Mus musculus OX=10090 GN=Ptbp2 PE=1 SV...	[more]

BLAST of Spg038877 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I7L3	3.4e-248	97.98	polypyrimidine tract-binding protein homolog 2-like isoform X2 OS=Cucurbita maxi...	[more]
A0A6J1IDD4	1.9e-246	97.11	polypyrimidine tract-binding protein homolog 2-like isoform X1 OS=Cucurbita maxi...	[more]
A0A6J1E303	4.2e-246	97.76	polypyrimidine tract-binding protein homolog 2 isoform X2 OS=Cucurbita moschata ...	[more]
A0A1S3AUZ4	4.2e-246	96.49	LOW QUALITY PROTEIN: polypyrimidine tract-binding protein homolog 2 OS=Cucumis m...	[more]
A0A5A7TLW2	2.1e-245	95.46	Polypyrimidine tract-binding protein-like protein 2 OS=Cucumis melo var. makuwa ...	[more]

BLAST of Spg038877 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53180.1	2.6e-184	79.68	polypyrimidine tract-binding protein 2	[more]
AT3G01150.1	7.0e-153	69.23	polypyrimidine tract-binding protein 1	[more]
AT3G01150.2	9.5e-134	62.56	polypyrimidine tract-binding protein 1	[more]
AT5G53180.2	1.5e-110	73.42	polypyrimidine tract-binding protein 2	[more]
AT1G43190.1	2.4e-36	31.92	polypyrimidine tract-binding protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 41..114 e-value: 1.3E-9 score: 47.9 coord: 269..339 e-value: 0.16 score: 13.7
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 44..95 e-value: 5.0E-8 score: 32.7
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 40..118 score: 11.946341
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 132..243 e-value: 8.4E-33 score: 114.6 coord: 264..368 e-value: 2.0E-36 score: 126.3
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 27..131 e-value: 9.2E-26 score: 92.2
IPR021790	PTBP1, RNA recognition motif 2-like	PFAM	PF11835	RRM_8	coord: 265..343 e-value: 2.0E-8 score: 34.3
None	No IPR available	PFAM	PF13893	RRM_5	coord: 131..198 e-value: 0.0066 score: 16.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 442..461
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 363..414
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 363..468
None	No IPR available	PANTHER	PTHR15592:SF29	POLYPYRIMIDINE TRACT-BINDING PROTEIN HOMOLOG 2	coord: 23..453
None	No IPR available	PANTHER	PTHR15592	MATRIN 3/NUCLEAR PROTEIN 220-RELATED	coord: 23..453
IPR034794	PTBPH1/PTBPH2, RNA recognition motif 3	CDD	cd12690	RRM3_PTBPH1_PTBPH2	coord: 265..361 e-value: 8.82545E-67 score: 207.405
IPR034793	PTBPH1/PTBPH2, RNA recognition motif 2	CDD	cd12691	RRM2_PTBPH1_PTBPH2	coord: 132..226 e-value: 2.36465E-60 score: 190.442
IPR034792	PTBPH1/PTBPH2, RNA recognition motif 1	CDD	cd12686	RRM1_PTBPH1_PTBPH2	coord: 38..118 e-value: 1.26059E-56 score: 180.523
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 147..240
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 28..122
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 271..367

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg038877.1	Spg038877.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding