Spg038801 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg038801
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	28S ribosomal protein S9, mitochondrial
Location	scaffold12: 695488 .. 696684 (+)
RNA-Seq Expression	Spg038801
Synteny	Spg038801

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTTCTCGTTTACTTCCTAAACCCTCCCATTTCAGATTGCTCGCCTTGATTTCCACTAAACCCCCAGCTCAAACTCCTACTTTTCGTCTTCTTCCTCGATTCCTCTCCACCAATAACAATGGGAGTAACAACAATAACAACAGTGGAAGCAGAGACCAACCGACGAGCAATGTCTGGAAACTTTCCCAGGAGAACGACGGAAAATTTGATCAATTGTTCACTCAGGAAGCTGACAACCTTGATGGCATTGCGGAGGATGATTCTGCTCCGAGCCACGACGATTCATGGGTGAGGTCGAAGGACGGGGATCAGGGTGCCGAGGGGGACATTTTTGCGAGCTTGGAGAAGGAAATTCGAGGAAATAAAGATGGCGATGGTGATAATGAATGGGTTACGGCGAAAAAATTCGAGCCGTGGAGCTTGGTGGAGGAAGAAAAGAGTGATGTCTTTAACATTCAAGAGGATGCAGTCGAAATTGGTGGATCCAGAGATGAGATTAAAGAAGTGGATAGTGAGAGCAGTGAGGACGCTAAGAAGCTCGAAAAGGAGGAGCAGGAACTCACTGCCATCCTTAAAGGCAAGTTTTTCTCCCCCTAGATTGGAAGAGTGTATTTCAAATTTAACAAATTAATGTATTTAAATGGGTTTCTATATTCTGTATATGTATTTATTGTTTGAGGATTCAGTTTGGTAAAATGGTGGTGTGATCCAGATCATTTGATTCTAAGGTGGTTATCCTGATCGAGGCAATTCATAAGAATGTTGTTACTCGTAGCATTTGTGTTTATCTTGAGAACGGCAAAAGTATAGAATTGATACCATTGGTCTTTTACTTTTTCCCTGTGTAGTGGTTTAAACGGTGTCATTTGTTGGTTAGTTAAATAAGTTGAATTTTATTGGTTAATGTCGTTACTCTTCTGTGATGTATTTTAGCTGATATGCCCCCGCCCCTAAGCTTTAATCTAGTTAACACAATATTTTCAGATTTGTAGATTCGTAGATTTGTATTGTAAGCTTAACGAAGAAGAATGATGCCCATTTAACTAAATAACTTTGGAGGTTTTAAAAAAAATTAAGTGGACGATCGGCTTTTGGAGATATTCACAGGTTGGAGTTTTAAAGCCATCACTAAGATTGTATGGAACTATGTTGCCTGCGCTTTTGTTTGAGCCTTTGGAAGGAGAGAAACCTTAA

mRNA sequence

ATGCTTTCTCGTTTACTTCCTAAACCCTCCCATTTCAGATTGCTCGCCTTGATTTCCACTAAACCCCCAGCTCAAACTCCTACTTTTCGTCTTCTTCCTCGATTCCTCTCCACCAATAACAATGGGAGTAACAACAATAACAACAGTGGAAGCAGAGACCAACCGACGAGCAATGTCTGGAAACTTTCCCAGGAGAACGACGGAAAATTTGATCAATTGTTCACTCAGGAAGCTGACAACCTTGATGGCATTGCGGAGGATGATTCTGCTCCGAGCCACGACGATTCATGGGTGAGGTCGAAGGACGGGGATCAGGGTGCCGAGGGGGACATTTTTGCGAGCTTGGAGAAGGAAATTCGAGGAAATAAAGATGGCGATGGTGATAATGAATGGGTTACGGCGAAAAAATTCGAGCCGTGGAGCTTGGTGGAGGAAGAAAAGAGTGATGTCTTTAACATTCAAGAGGATGCAGTCGAAATTGGTGGATCCAGAGATGAGATTAAAGAAGTGGATAGTGAGAGCAGTGAGGACGCTAAGAAGCTCGAAAAGGAGGAGCAGGAACTCACTGCCATCCTTAAAGGCAAATCATTTGATTCTAAGGTGGTTATCCTGATCGAGGCAATTCATAAGAATGTTGTTACTCGTAGCATTTGTGTTTATCTTGAGAACGGCAAAAGTATAGAATTGATACCATTGGTTGGAGTTTTAAAGCCATCACTAAGATTGTATGGAACTATGTTGCCTGCGCTTTTGTTTGAGCCTTTGGAAGGAGAGAAACCTTAA

Coding sequence (CDS)

ATGCTTTCTCGTTTACTTCCTAAACCCTCCCATTTCAGATTGCTCGCCTTGATTTCCACTAAACCCCCAGCTCAAACTCCTACTTTTCGTCTTCTTCCTCGATTCCTCTCCACCAATAACAATGGGAGTAACAACAATAACAACAGTGGAAGCAGAGACCAACCGACGAGCAATGTCTGGAAACTTTCCCAGGAGAACGACGGAAAATTTGATCAATTGTTCACTCAGGAAGCTGACAACCTTGATGGCATTGCGGAGGATGATTCTGCTCCGAGCCACGACGATTCATGGGTGAGGTCGAAGGACGGGGATCAGGGTGCCGAGGGGGACATTTTTGCGAGCTTGGAGAAGGAAATTCGAGGAAATAAAGATGGCGATGGTGATAATGAATGGGTTACGGCGAAAAAATTCGAGCCGTGGAGCTTGGTGGAGGAAGAAAAGAGTGATGTCTTTAACATTCAAGAGGATGCAGTCGAAATTGGTGGATCCAGAGATGAGATTAAAGAAGTGGATAGTGAGAGCAGTGAGGACGCTAAGAAGCTCGAAAAGGAGGAGCAGGAACTCACTGCCATCCTTAAAGGCAAATCATTTGATTCTAAGGTGGTTATCCTGATCGAGGCAATTCATAAGAATGTTGTTACTCGTAGCATTTGTGTTTATCTTGAGAACGGCAAAAGTATAGAATTGATACCATTGGTTGGAGTTTTAAAGCCATCACTAAGATTGTATGGAACTATGTTGCCTGCGCTTTTGTTTGAGCCTTTGGAAGGAGAGAAACCTTAA

Protein sequence

MLSRLLPKPSHFRLLALISTKPPAQTPTFRLLPRFLSTNNNGSNNNNNSGSRDQPTSNVWKLSQENDGKFDQLFTQEADNLDGIAEDDSAPSHDDSWVRSKDGDQGAEGDIFASLEKEIRGNKDGDGDNEWVTAKKFEPWSLVEEEKSDVFNIQEDAVEIGGSRDEIKEVDSESSEDAKKLEKEEQELTAILKGKSFDSKVVILIEAIHKNVVTRSICVYLENGKSIELIPLVGVLKPSLRLYGTMLPALLFEPLEGEKP

Homology

[Close]

BLAST of Spg038801 vs. NCBI nr
Match: XP_022972996.1 (28S ribosomal protein S9, mitochondrial [Cucurbita maxima])

HSP 1 Score: 320.5 bits (820), Expect = 1.4e-83
Identity = 175/237 (73.84%), Postives = 199/237 (83.97%), Query Frame = 0


Query: 1   MLSRLLPKPSHFRLLALISTKPPAQTPTFRLLPRFLSTNNNGSNNNNNSGSRDQPTSNVW 60
           MLSRLLPKPSHFRLL LISTKPPAQ P F +LPRF S++NNGSNNN N GSRDQPTSNVW
Sbjct: 1   MLSRLLPKPSHFRLLTLISTKPPAQAPRFHVLPRFFSSSNNGSNNNKNGGSRDQPTSNVW 60

Query: 61  KLSQENDGKFDQLFTQEADNLDGIAEDDSAPSHDDSWVRSKDGDQGAEGDIFASLEKEIR 120
           KLS+E+D  FDQLFTQEADNLDGIAEDDSAP++DD+WVRS+DGDQGA GDIFA +EKEIR
Sbjct: 61  KLSRESDENFDQLFTQEADNLDGIAEDDSAPANDDTWVRSEDGDQGAAGDIFARVEKEIR 120

Query: 121 GNKDGDGDNEWVTAKKFEPWSLVEEEKSDVFNIQEDAVEIGGSRDEIKEVDSESSEDAKK 180
           G+KDGDG NEWVTA K EPWSLVEEEKSDVFNIQEDAVEIG SRDEIKEVDSESSEDA+K
Sbjct: 121 GDKDGDGANEWVTATKLEPWSLVEEEKSDVFNIQEDAVEIGKSRDEIKEVDSESSEDARK 180

Query: 181 LEKEEQELTAILKGKSFDSKVVILIEAIHKNVVTRSICVYLENGKSIELIPLVGVLK 238
           LEKEEQELTAILKG +     +I    I  +++   I   L++ + +E +P + VL+
Sbjct: 181 LEKEEQELTAILKGPNRAFGDLIAASGITDDMLDSLIA--LKDLEGVEGLPPLSVLE 235

[Close]

BLAST of Spg038801 vs. NCBI nr
Match: KAG6579377.1 (30S ribosomal protein S9, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 319.3 bits (817), Expect = 3.0e-83
Identity = 175/237 (73.84%), Postives = 197/237 (83.12%), Query Frame = 0


Query: 1   MLSRLLPKPSHFRLLALISTKPPAQTPTFRLLPRFLSTNNNGSNNNNNSGSRDQPTSNVW 60
           MLSRLLPKPSHFRLL LISTKPPAQ+P F LLPRF S++NNGSNNN N GSRDQPTSNVW
Sbjct: 1   MLSRLLPKPSHFRLLTLISTKPPAQSPRFHLLPRFFSSSNNGSNNNKNGGSRDQPTSNVW 60

Query: 61  KLSQENDGKFDQLFTQEADNLDGIAEDDSAPSHDDSWVRSKDGDQGAEGDIFASLEKEIR 120
           KLS+E+D  FDQLFTQEADNLDGIAEDDSAP++DDSWVRS+DGDQGA GDIFA +EKEIR
Sbjct: 61  KLSRESDENFDQLFTQEADNLDGIAEDDSAPANDDSWVRSEDGDQGAAGDIFARVEKEIR 120

Query: 121 GNKDGDGDNEWVTAKKFEPWSLVEEEKSDVFNIQEDAVEIGGSRDEIKEVDSESSEDAKK 180
           GNKD DG NEWV A KFEPW LVEEEKSDVFNIQEDAVEIG  RDEIKEVDSESSEDA+K
Sbjct: 121 GNKDDDGANEWVAATKFEPWGLVEEEKSDVFNIQEDAVEIGKPRDEIKEVDSESSEDARK 180

Query: 181 LEKEEQELTAILKGKSFDSKVVILIEAIHKNVVTRSICVYLENGKSIELIPLVGVLK 238
           LEKEEQELTAILKG +     +I    I  +++   I   L++ + +E +P + VL+
Sbjct: 181 LEKEEQELTAILKGPNRAFGDLIAASGITDDMLDSLIA--LKDLEGVEGLPPLSVLE 235

[Close]

BLAST of Spg038801 vs. NCBI nr
Match: XP_023550446.1 (28S ribosomal protein S9, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 318.2 bits (814), Expect = 6.8e-83
Identity = 174/237 (73.42%), Postives = 197/237 (83.12%), Query Frame = 0


Query: 1   MLSRLLPKPSHFRLLALISTKPPAQTPTFRLLPRFLSTNNNGSNNNNNSGSRDQPTSNVW 60
           MLSRLLPKPSHFRLL LISTKPPAQ P F LLPRF S++NNGSNNN N GSRDQPTSNVW
Sbjct: 1   MLSRLLPKPSHFRLLTLISTKPPAQAPRFHLLPRFFSSSNNGSNNNKNGGSRDQPTSNVW 60

Query: 61  KLSQENDGKFDQLFTQEADNLDGIAEDDSAPSHDDSWVRSKDGDQGAEGDIFASLEKEIR 120
           KLS+E+D  FDQLFTQEADNLDGIAEDDSAP++DDSWVRS+DGDQGA GDIFA +EKEIR
Sbjct: 61  KLSRESDENFDQLFTQEADNLDGIAEDDSAPANDDSWVRSEDGDQGAAGDIFARVEKEIR 120

Query: 121 GNKDGDGDNEWVTAKKFEPWSLVEEEKSDVFNIQEDAVEIGGSRDEIKEVDSESSEDAKK 180
           GNKD DG NEWV A KFEPWSLVEEEKSD+FNIQEDAVEIG  RDEIKEVDSES+EDA+K
Sbjct: 121 GNKDDDGANEWVAATKFEPWSLVEEEKSDLFNIQEDAVEIGKPRDEIKEVDSESNEDARK 180

Query: 181 LEKEEQELTAILKGKSFDSKVVILIEAIHKNVVTRSICVYLENGKSIELIPLVGVLK 238
           LEKEEQELTAILKG +     +I    I  +++   I   L++ + +E +P + VL+
Sbjct: 181 LEKEEQELTAILKGPNRAFGDLIAASGITDDMLDSLIA--LKDLEGVEGLPPLSVLE 235

[Close]

BLAST of Spg038801 vs. NCBI nr
Match: XP_038874638.1 (30S ribosomal protein S9, mitochondrial isoform X3 [Benincasa hispida])

HSP 1 Score: 318.2 bits (814), Expect = 6.8e-83
Identity = 167/194 (86.08%), Postives = 178/194 (91.75%), Query Frame = 0


Query: 1   MLSRLLPKPSHFRLLALISTKPPAQTPTFRLLPRFLSTNNNGSNNNNNSGSRDQPTSNVW 60
           MLSRLLPKPSHFRLL LISTKPPAQTP+F LL R  ST+NNGSNNN NSGSRDQPTSNVW
Sbjct: 1   MLSRLLPKPSHFRLLGLISTKPPAQTPSFHLLLRLFSTDNNGSNNNRNSGSRDQPTSNVW 60

Query: 61  KLSQENDGKFDQLFTQEADNLDGIAEDDSAPSHDDSWVRSKDGDQGAEGDIFASLEKEIR 120
           K+SQENDG FDQLFTQEAD+LD IAEDDSAP +DDSWV SK  DQGAEGDIFAS+E+E+R
Sbjct: 61  KISQENDGNFDQLFTQEADDLDSIAEDDSAPGNDDSWVSSKGEDQGAEGDIFASMEQEVR 120

Query: 121 GNKDGDGDNEWVTAKKFEPWSLVEEEKSDVFNIQEDAVEIGGSRDEIKEVDSESSEDAKK 180
           GNKDGDGDNEWVTAKKFEPWSLVEEEKSDVFNI+E AVEIG S DE KEVDS+SSEDA+K
Sbjct: 121 GNKDGDGDNEWVTAKKFEPWSLVEEEKSDVFNIEEVAVEIGESSDETKEVDSKSSEDARK 180

Query: 181 LEKEEQELTAILKG 195
           LEKEEQELTAILKG
Sbjct: 181 LEKEEQELTAILKG 194

[Close]

BLAST of Spg038801 vs. NCBI nr
Match: XP_038874636.1 (30S ribosomal protein S9, mitochondrial isoform X1 [Benincasa hispida])

HSP 1 Score: 318.2 bits (814), Expect = 6.8e-83
Identity = 167/194 (86.08%), Postives = 178/194 (91.75%), Query Frame = 0


Query: 1   MLSRLLPKPSHFRLLALISTKPPAQTPTFRLLPRFLSTNNNGSNNNNNSGSRDQPTSNVW 60
           MLSRLLPKPSHFRLL LISTKPPAQTP+F LL R  ST+NNGSNNN NSGSRDQPTSNVW
Sbjct: 1   MLSRLLPKPSHFRLLGLISTKPPAQTPSFHLLLRLFSTDNNGSNNNRNSGSRDQPTSNVW 60

Query: 61  KLSQENDGKFDQLFTQEADNLDGIAEDDSAPSHDDSWVRSKDGDQGAEGDIFASLEKEIR 120
           K+SQENDG FDQLFTQEAD+LD IAEDDSAP +DDSWV SK  DQGAEGDIFAS+E+E+R
Sbjct: 61  KISQENDGNFDQLFTQEADDLDSIAEDDSAPGNDDSWVSSKGEDQGAEGDIFASMEQEVR 120

Query: 121 GNKDGDGDNEWVTAKKFEPWSLVEEEKSDVFNIQEDAVEIGGSRDEIKEVDSESSEDAKK 180
           GNKDGDGDNEWVTAKKFEPWSLVEEEKSDVFNI+E AVEIG S DE KEVDS+SSEDA+K
Sbjct: 121 GNKDGDGDNEWVTAKKFEPWSLVEEEKSDVFNIEEVAVEIGESSDETKEVDSKSSEDARK 180

Query: 181 LEKEEQELTAILKG 195
           LEKEEQELTAILKG
Sbjct: 181 LEKEEQELTAILKG 194

[Close]

BLAST of Spg038801 vs. ExPASy TrEMBL
Match: A0A6J1I7H1 (28S ribosomal protein S9, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111471519 PE=3 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 6.6e-84
Identity = 175/237 (73.84%), Postives = 199/237 (83.97%), Query Frame = 0


Query: 1   MLSRLLPKPSHFRLLALISTKPPAQTPTFRLLPRFLSTNNNGSNNNNNSGSRDQPTSNVW 60
           MLSRLLPKPSHFRLL LISTKPPAQ P F +LPRF S++NNGSNNN N GSRDQPTSNVW
Sbjct: 1   MLSRLLPKPSHFRLLTLISTKPPAQAPRFHVLPRFFSSSNNGSNNNKNGGSRDQPTSNVW 60

Query: 61  KLSQENDGKFDQLFTQEADNLDGIAEDDSAPSHDDSWVRSKDGDQGAEGDIFASLEKEIR 120
           KLS+E+D  FDQLFTQEADNLDGIAEDDSAP++DD+WVRS+DGDQGA GDIFA +EKEIR
Sbjct: 61  KLSRESDENFDQLFTQEADNLDGIAEDDSAPANDDTWVRSEDGDQGAAGDIFARVEKEIR 120

Query: 121 GNKDGDGDNEWVTAKKFEPWSLVEEEKSDVFNIQEDAVEIGGSRDEIKEVDSESSEDAKK 180
           G+KDGDG NEWVTA K EPWSLVEEEKSDVFNIQEDAVEIG SRDEIKEVDSESSEDA+K
Sbjct: 121 GDKDGDGANEWVTATKLEPWSLVEEEKSDVFNIQEDAVEIGKSRDEIKEVDSESSEDARK 180

Query: 181 LEKEEQELTAILKGKSFDSKVVILIEAIHKNVVTRSICVYLENGKSIELIPLVGVLK 238
           LEKEEQELTAILKG +     +I    I  +++   I   L++ + +E +P + VL+
Sbjct: 181 LEKEEQELTAILKGPNRAFGDLIAASGITDDMLDSLIA--LKDLEGVEGLPPLSVLE 235

[Close]

BLAST of Spg038801 vs. ExPASy TrEMBL
Match: A0A6J1E6E6 (28S ribosomal protein S9, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111430383 PE=3 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 4.3e-83
Identity = 175/237 (73.84%), Postives = 197/237 (83.12%), Query Frame = 0


Query: 1   MLSRLLPKPSHFRLLALISTKPPAQTPTFRLLPRFLSTNNNGSNNNNNSGSRDQPTSNVW 60
           MLSRLLPKPSHFRLL LISTKPPAQ+P F LLPRF S++NNGSNNN N GSRDQPTSNVW
Sbjct: 1   MLSRLLPKPSHFRLLTLISTKPPAQSPRFHLLPRFFSSSNNGSNNNKNGGSRDQPTSNVW 60

Query: 61  KLSQENDGKFDQLFTQEADNLDGIAEDDSAPSHDDSWVRSKDGDQGAEGDIFASLEKEIR 120
           KLS+E+D  FDQLFTQEADNLDGIAEDDSAP++ DSWVRS+DGDQGA GDIFA +EKEIR
Sbjct: 61  KLSRESDENFDQLFTQEADNLDGIAEDDSAPANADSWVRSEDGDQGAAGDIFARVEKEIR 120

Query: 121 GNKDGDGDNEWVTAKKFEPWSLVEEEKSDVFNIQEDAVEIGGSRDEIKEVDSESSEDAKK 180
           GNKD DG NEWV A KFEPWSLVEEEKSDVFNIQEDAVEIG  RDEIKEVDSESSEDA+K
Sbjct: 121 GNKDDDGANEWVAATKFEPWSLVEEEKSDVFNIQEDAVEIGKPRDEIKEVDSESSEDARK 180

Query: 181 LEKEEQELTAILKGKSFDSKVVILIEAIHKNVVTRSICVYLENGKSIELIPLVGVLK 238
           LEKEEQELTAILKG +     +I    I  +++   I   L++ + +E +P + VL+
Sbjct: 181 LEKEEQELTAILKGPNRAFGDLIAASGITDDMLDSLIA--LKDLEGVEGLPPLSVLE 235

[Close]

BLAST of Spg038801 vs. ExPASy TrEMBL
Match: A0A6J1DZS9 (28S ribosomal protein S9, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111026113 PE=3 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 7.3e-83
Identity = 164/194 (84.54%), Postives = 179/194 (92.27%), Query Frame = 0


Query: 1   MLSRLLPKPSHFRLLALISTKPPAQTPTFRLLPRFLSTNNNGSNNNNNSGSRDQPTSNVW 60
           MLSRLLPKPSHF+LLALISTKPP Q+P+FRLLPRF STN+NGSNNN +SGSRDQPTSNVW
Sbjct: 1   MLSRLLPKPSHFKLLALISTKPPPQSPSFRLLPRFFSTNDNGSNNNKSSGSRDQPTSNVW 60

Query: 61  KLSQENDGKFDQLFTQEADNLDGIAEDDSAPSHDDSWVRSKDGDQGAEGDIFASLEKEIR 120
           KLSQENDG FDQLFTQ+ +NLDGIAEDDSA   DDSWVRSKDGD+GAEGD+FAS+EKEI+
Sbjct: 61  KLSQENDGNFDQLFTQDVENLDGIAEDDSAAVDDDSWVRSKDGDRGAEGDVFASMEKEIQ 120

Query: 121 GNKDGDGDNEWVTAKKFEPWSLVEEEKSDVFNIQEDAVEIGGSRDEIKEVDSESSEDAKK 180
           GNKDG GDNEWVTAKK+EPWSLVEEEKSDVFNI+E  VEIG SRDE +EVD  SSEDAKK
Sbjct: 121 GNKDGAGDNEWVTAKKYEPWSLVEEEKSDVFNIEEYTVEIGESRDESREVDGGSSEDAKK 180

Query: 181 LEKEEQELTAILKG 195
           LEKEEQELTA+LKG
Sbjct: 181 LEKEEQELTAVLKG 194

[Close]

BLAST of Spg038801 vs. ExPASy TrEMBL
Match: A0A5A7SLF3 (28S ribosomal protein S9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001050 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.7e-76
Identity = 159/207 (76.81%), Postives = 176/207 (85.02%), Query Frame = 0


Query: 1   MLSRLLPKPSHFRLLALISTKPPAQTPTFRLLPRFLSTNNNGSNNNNNSGSRDQPTSNVW 60
           MLSRLLPKPSH RLLALISTKPPAQTP+F LLPRF STNNNGSNNNNNSGSRDQPTSN+W
Sbjct: 1   MLSRLLPKPSHIRLLALISTKPPAQTPSFHLLPRFFSTNNNGSNNNNNSGSRDQPTSNIW 60

Query: 61  KLSQENDGKFDQLFTQEADNLDGIAEDDSAPSHDDSWVRSKDGDQGAEGDIFASLEKEIR 120
           K+SQEND  FD+LFTQEADNLDGIAE+DSAP +DDSWV SK GD+ AEGDIFASLEKE++
Sbjct: 61  KISQENDENFDKLFTQEADNLDGIAEEDSAPRNDDSWVTSKSGDRDAEGDIFASLEKEVQ 120

Query: 121 GNKDGDGDNEWVTAKKFEPWSLVEEEKSDVFNIQEDAVEIGGSRDEIKEVDSESSEDAKK 180
           GNKDGDG + W   KKF+ WSLVE+EKSDVFNI+E   +IG  RDE+KEVD+ES EDA+K
Sbjct: 121 GNKDGDGYDGWPMEKKFDVWSLVEDEKSDVFNIEEGGGKIGEFRDELKEVDTESIEDARK 180

Query: 181 LEK--------EEQELTAILKGKSFDS 200
           LEK        EEQELTAILKGK F S
Sbjct: 181 LEKENAMKLEREEQELTAILKGKFFFS 207

[Close]

BLAST of Spg038801 vs. ExPASy TrEMBL
Match: A0A1S3ATW2 (28S ribosomal protein S9, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103482908 PE=3 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 3.3e-75
Identity = 156/202 (77.23%), Postives = 173/202 (85.64%), Query Frame = 0


Query: 1   MLSRLLPKPSHFRLLALISTKPPAQTPTFRLLPRFLSTNNNGSNNNNNSGSRDQPTSNVW 60
           MLSRLLPKPSH RLLALISTKPPAQTP+F LLPRF STNNNGSNNNNNSGSRDQPTSN+W
Sbjct: 1   MLSRLLPKPSHIRLLALISTKPPAQTPSFHLLPRFFSTNNNGSNNNNNSGSRDQPTSNIW 60

Query: 61  KLSQENDGKFDQLFTQEADNLDGIAEDDSAPSHDDSWVRSKDGDQGAEGDIFASLEKEIR 120
           K+SQEND  FD+LFTQEADNLDGIAE+DSAP +DDSWV SK GD+ AEGDIFASLEKE++
Sbjct: 61  KISQENDENFDKLFTQEADNLDGIAEEDSAPRNDDSWVTSKSGDRDAEGDIFASLEKEVQ 120

Query: 121 GNKDGDGDNEWVTAKKFEPWSLVEEEKSDVFNIQEDAVEIGGSRDEIKEVDSESSEDAKK 180
           GNKDGDG + W   KKF+ WSLVE+EKSDVFNI+E   +IG  RDE+KEVD+ES EDA+K
Sbjct: 121 GNKDGDGYDGWPMEKKFDVWSLVEDEKSDVFNIEEGGGKIGEFRDELKEVDTESIEDARK 180

Query: 181 LEK--------EEQELTAILKG 195
           LEK        EEQELTAILKG
Sbjct: 181 LEKENAMKLEREEQELTAILKG 202

The following BLAST results are available for this feature:

BLAST of Spg038801 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022972996.1	1.4e-83	73.84	28S ribosomal protein S9, mitochondrial [Cucurbita maxima]	[more]
KAG6579377.1	3.0e-83	73.84	30S ribosomal protein S9, mitochondrial, partial [Cucurbita argyrosperma subsp. ...	[more]
XP_023550446.1	6.8e-83	73.42	28S ribosomal protein S9, mitochondrial [Cucurbita pepo subsp. pepo]	[more]
XP_038874638.1	6.8e-83	86.08	30S ribosomal protein S9, mitochondrial isoform X3 [Benincasa hispida]	[more]
XP_038874636.1	6.8e-83	86.08	30S ribosomal protein S9, mitochondrial isoform X1 [Benincasa hispida]	[more]

BLAST of Spg038801 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg038801 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I7H1	6.6e-84	73.84	28S ribosomal protein S9, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111471...	[more]
A0A6J1E6E6	4.3e-83	73.84	28S ribosomal protein S9, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1DZS9	7.3e-83	84.54	28S ribosomal protein S9, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A5A7SLF3	1.7e-76	76.81	28S ribosomal protein S9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3ATW2	3.3e-75	77.23	28S ribosomal protein S9, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103482908 ...	[more]

BLAST of Spg038801 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 167..187
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..107
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..107
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..59

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg038801.1	Spg038801.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005763	mitochondrial small ribosomal subunit
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome