Spg038760 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg038760
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Locationscaffold12: 2287487 .. 2293023 (-)
RNA-Seq ExpressionSpg038760
SyntenySpg038760
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAACCACAGAGGCTCACCCTGTTCAACCATGGAATCATTCTACCCGATCCATCTCCATAGATAGGAAAAATTTCACAATAGCTTTTGATGAACATTTTAGAGGAAGTAGAGCAAAGATCACCGAATATAGCAAATACTCATCCCATTCGATTTCTCTTTCTTGGAAATCTCTAAAATGGCTTGCCTCATCCTTCAACACCATTGCTCACTCACCATGTTCGCACAAGTTCTTCTCGGATTTAAGGAGCGACGACTATACTCTTTGGATCGAAAAGTTGAATAACAAGAATGGCTTCTTTGTCGAAGTCAACCAGGTGCAAAATTCTGGTAGTCGACAAAGGATACTTATTCCATCGGAGAATAACAAACAAGGATGGTTTTCTTTCTTCTCGTTAATCTCTGAATACCCCGCTGAAGCCCATCGACAGCCCACAAAGCCTTCTCCTACATCTTTCAAGGACGTCCTTCAATCAAAGCCTCCAATAGATACTATTACTCCTCCCTCGAAAGAGCCTTCAGCCTCCACAATTGATGAAGAATGGAATGAGATCATTGTTCTCCAACGCAGCAATCTTCATGATGACTGGCCGAGCATTCATCAATCACTTATTGCCGGGCAAGCCATTCGATGTTGCATCAATCCGTTCCAGGCAAATAAAGCCATGCTCCATGTGTATGATCGAGCCATTGCTACAAATTTATGCTCTCACTCCGATTGGACCTTTCTTGGTAAGCATAAGTTGAAATTTTATCCTTTAACCACTACTTCTACACAACAGGATATTATGACACCATCTTATGGAGGTTGGATTGAGATCTCTTCTCTTCCCCCTACCTTGTGGACTGAGCGTATTTTCCGGTTCATTGGGGATTCCTGCGGCGGTTTTGTGGAGACTTCTAACCTCACTAATAGGATGATTATCGCAACTGAGGCTAGGATAAAAATTCGGCCAAATACTTCTGGTTTCATTCCCACCGCCGTAAAGCTCACATCAGACCTTGCCGGCGTTGAACTCACGGTGCAGACCAAAGGCATTTCCGGCAACCCTCACAGAATCGGCCTCATTAAAGATGACAAACCGAATATGGAATTTAAGGATATTGAATTAAAGAAGAAAGAGGAATCGGAAAAAGAGAATTCGAATTTTAATTCGAAAAGGAAATCTCCACCAGCTAATTTCCCAAAAATCTCGGTACCAAATTTTATCACCTCCAGTGCACCGCTTTTATCTGATAAAATCGACAAAGGAAAGAATTATCTCCCACCGCCTCCTTCTGATTCATCGGTTAGTCAACTGCCTGGGCCCACAATTCTTAAATTCGGCCACATTGGATCTACATCAAGGAATGAATTGAACGTTGGATCCGACACTAAAGCTTTTCTCTCCAGCCCATCTACAAACCCTACGGCCCACAACTCAACTCAAGACCCAACATCTCCTCGACCGTTGGACCTCACCATCTTTAATGATCCACTAATTGAAGGCCCAATTGATCCGAGCCAACCGTACCAGAACTCTCCATCCCCGATAGACATCATGCCCCCACTGCAACAGAATCCTACCCATAATACCTCCTCTCCAAATCCATTGGAACCTCCACAAATCCTACCCTACCATTCCCCACGGCTTTCTCCAGTACCAAATATGAAGTCTCCAACACCGAACACATTTCCCAATTGCCTTCAACATTTAGCCCCGATCTTAAGTAAACATGGCCTTTGTATTATGGCTCTACCAACAGTACCAAAGTCAAGTAAAAGGAAAAAATTGGCAACTACAGGCAAGAAACCTAAACTACAAAGGGAGGTACGAAATCTTCAATCTAATATCAATTATGATAAAGCAGCCACTTTGGCGTTAATGGAGGGGGCCGAGAATGTTATATGAAATTTTTGACATGGAATGTGCGTGGTTTGGGTTCATGGAAGAAAAGGGCTTTAATTAAGAAAACTATTCAGCAGCAAAACCCGGGCATTGTTCTTATTCAGGAGACTAAAAAATCTCAGATTTGTAGTAGGATTATTAAATCCCTATGGAGCTCTTCTCATATTGGTTGGACTTCTCTTGAATTTGTGGGTGCCTCTGGAGGCATTCTTATTATGTGGAGTGAACCAGAATTTTCAGTAAAGGAGACTATTCAAGGTCTTTTCACTCTCTCTATTCATATCTTTATGGCTGATAACTTCTCTTTTTGGCTATCGGCTATTTATGGCCCCTCTAGGCATGCTGACAGATCGGACTTTTGGAATGAACTTCACGACTTGGCTGGTTTAGGTGGTAACAATTGGATCCTTGGAGGAGATTTTAATGTCACCCGCTGGTCATGGGAAAAATCGCATGGCCGGCCCGTGACTAGGAGTATGCGTATTTTCAACCAATGGATCGATGATTACCATCTCATAGACACTCCTTTACAGAATGGATGCTACACGTGGTCCAGTTGTGGTGAAAATCATTATTGCTCATTGATTGATCGATTCTTAATGACGGATACCTGTCTCAATAAATTTGGTGCAGCTCGTTTTCTTCGTCTTGATAGGGTTACATCTGACCATTACCCATGTACTCTATCATTTGGGGATCTCTCTTGGGGCCCTTGTCCCTTTAGATTCGAGAATGCTTGGCTGAAAATAGACTCTTTTCGTGGTCTTATGGATAATTGGTGGTCTGAAAACACTGTTCAGGGTTGGCCAGGCCATGGGTTTATGATGAAACTTAAAGGGTTGAAATCTGAGCTCAGAAAATGGAATTTATCTCAGCGATCATCTGCTGCTCAACTTCCATCTCTTGTTACACAATTGAAATTGTTGGATGATACAGAGGACAGGGTTCCATTATCTATGGAACAAATATCTTCGAGAAGATTATTGCGAGAACAAATTGAGGATTTATCAGCCCAAGAACACATTTATTGGCACCAACGCTGTAAACTGAACTGGTTAAAAGAAGGTGATGAAAATACAAAATTTTTCCATAGAATTATGGCTGCCCCTAAAAGAAAGAATTCCATCTCAGAGATCTTGTCTAGAGAAGGCAATAGCCTCTTTACAGATAATGATATAGAAGCGGAGTTCCTTGGTTTTTATCAAACTTTGTTTACAAAGGACCGTGGCACTAGATTTCTACCAACTAATGTTGATTGGTGTCCAATTAGTGATTCACAATCGACAGGATTGGAGGCGGTTTTTTCTGAAGATGAGGTCTATCAAGCAGTTAAATCTTTAGGTTCGAGTAAATCTCCAGGTCCAGATGGTTTTACAGCTGAATTCTTCAAATTTTCTTGGCATACCATCAAACGTGATATTATGACTATGATGGAGGATTTCTATAATACAGGTATTATCAATGTATCTTTGAATGAAACTTATATCTGCCTTATTCCAAAGAAATTAGACTCTAAATCAGTATCAGACTTCCGACCGATTAGTCTAATCCCATGTGCATACAAGATTATAGCTAGAGTTTTGTCCAATCGGTTGAAAATGGTTTTGCCATCCACTATTGCGGAGAATCAAATGGCCTTTGTGGCTAACAGACAAATTCTCGATGCTTCGCTTATAGCAAATGAGCTGATTGATGATTGGAATTTATCTCATAAGAAAGGTGTGGTGATTAAGTTAGATCTTGAAAAGGCTTTTGATAAAGTCGATTGGGATTTTCTAGATGCAATTCTTCAGGCCAAGGGTTTTGGCTTGGTATGGAGGAAATGGATTTATGGATGTCTTTCTAGTGTTAACTACTCTATCATTATTAATGGAAAACCACGAGGCAAGATCATTCCCTCTCGAGGAATTCGTCAAGGGGATCCTCTTTCCCCCTTTCTTTTTATCTTGGTATCTGATTGCCTAAGTCGTTTATTATCACACAGCGCTAATATGGGTCGAATTGTCTCGCATCCGATTGGAAATTCACATCTTTATGTGAATCATTTACAATTTGCTGATGATACTTTATTATTCTCCATCTTTCGTAAGGATGCTTTGGCTAACATGTTCGATATTGTTAAAATTTTTGAGCTAGCTTCTGGATTGAATGTTAACTATTCCAAGAGTGAAGTTTTGGGAATTCACTTAGAGGAGTCAGAAATGGAATGGTTGACAACTACGTTTGGCTGTAAACAAGGAATTTGGCCTTCCACTTACCTTGGTTTACCTTTGGGAGGCAGTCCTAAAACTATTCCTTTTTGGCAGCCTGTGATTGAAAGAATCCAACATAAACTTCATAGTTGGAAATATTCATATATTTCGAAAGGTGGTCGACATACTCTTACTCAAGCAGTTCTCTCCTGTATGCCAATTTATTATTTATCCTTATTCAAATTGCCAGGAAAGGTTGCAAAAACTCTTGATAAGCTATTTCGTGATTTTTTTTGGGAAGGATCTAGAGGTGATGGTGGTATGCACAATATTAATTGGGCAACAGTACAACTCCCACATTTGATGGGGGGTATTGGTATTGGTAACTTAAAAAATCGCAATCTTGCTCTTCTTGCAAAGTGGATTTGGAGATTTTTACATGAGGAAAACGCACTATGGCACAAGCTGATTGTAGCTAAATATTATAACTATGGCTTGCCTAACCTCTGGCCTACCATTATTCAGAAAAGTTCTCACAAATCTCCTTGGCGATTCATTACGTCTACTATTGACCTTGTATCTTCACGTGTTAAAAGAAGGTTGGGTAACGGTCTTGCTACTTCATTCTGGCATGATTCGTGGTTAAATTGCGGTGTTCTGGCTACAAATTTTCCTCGTCTTTATCGTTTAACAGATCGTCCAAGGAGTTTGGTTGGTGAAACATGGATTGCTTATCAAACAGCATGGGATCTGAGTCTTCGGCGTAATTTAAATGATGTAGAGACAGAGGAATGGATGGATTTATCACTTATTCTTTCCTCCATCAGCTTACAGAACCGTAATGATTCCTGGATATGGCCTTTGGAATCGTCCAATATTTTTTCTGTTAAATCTCTCATGGAAGATTTAGTAGACTATTCGAATATGGCAAATGATCTATATAAGGCCATTTGGACAGATTTCTATCCAAAGAAGATCAAGATTTTTCTATGGGAGCTTAGTCATGGTGCTATTAATACAGTTGATCGACTTCAACGACGGATGCCTCATTTTCACTTGTCTCCATCTTGGTGCATAATGTGTGCTGCTAGCTCAGAATATCCTGGGCATTTATTTGTTCATTGTACCTTTGCATCCAGATATTGGTCAGAGATTCTTGATGCTTTTGGATGGTCCACCGTTTTTCCAAATTGCATTAACGATGTTCTTAATCTCATTTTTGTGGATCATCCCTTTCATGGAGAAAAGAAGATTTTGTGGCTTGCCTTGAACAGAGTCTTCTTTTGGTTTTTATGGGGCGAACGAAATTCTAGAATTTTCAGAGATTCTTTCTCTTCCTTTCATAAATTTATGGATCTAATTCTCTTTCATGCTTTGTATTGGTGTAAATGTAAACACCCCTTCTCTGATTATAGTTTATCCTTTTTGATTTCCAATTGGAAAGCTTTTATGTAA

mRNA sequence

ATGAAAACCACAGAGGCTCACCCTGTTCAACCATGGAATCATTCTACCCGATCCATCTCCATAGATAGGAAAAATTTCACAATAGCTTTTGATGAACATTTTAGAGGAAGTAGAGCAAAGATCACCGAATATAGCAAATACTCATCCCATTCGATTTCTCTTTCTTGGAAATCTCTAAAATGGCTTGCCTCATCCTTCAACACCATTGCTCACTCACCATGTTCGCACAAGTTCTTCTCGGATTTAAGGAGCGACGACTATACTCTTTGGATCGAAAAGTTGAATAACAAGAATGGCTTCTTTGTCGAAGTCAACCAGGTGCAAAATTCTGGTAGTCGACAAAGGATACTTATTCCATCGGAGAATAACAAACAAGGATGGTTTTCTTTCTTCTCGTTAATCTCTGAATACCCCGCTGAAGCCCATCGACAGCCCACAAAGCCTTCTCCTACATCTTTCAAGGACGTCCTTCAATCAAAGCCTCCAATAGATACTATTACTCCTCCCTCGAAAGAGCCTTCAGCCTCCACAATTGATGAAGAATGGAATGAGATCATTGTTCTCCAACGCAGCAATCTTCATGATGACTGGCCGAGCATTCATCAATCACTTATTGCCGGGCAAGCCATTCGATGTTGCATCAATCCGTTCCAGGCAAATAAAGCCATGCTCCATGTGTATGATCGAGCCATTGCTACAAATTTATGCTCTCACTCCGATTGGACCTTTCTTGGTAAGCATAAGTTGAAATTTTATCCTTTAACCACTACTTCTACACAACAGGATATTATGACACCATCTTATGGAGGTTGGATTGAGATCTCTTCTCTTCCCCCTACCTTGTGGACTGAGCGTATTTTCCGGTTCATTGGGGATTCCTGCGGCGGTTTTGTGGAGACTTCTAACCTCACTAATAGGATGATTATCGCAACTGAGGCTAGGATAAAAATTCGGCCAAATACTTCTGGTTTCATTCCCACCGCCGTAAAGCTCACATCAGACCTTGCCGGCGTTGAACTCACGGTGCAGACCAAAGGCATTTCCGGCAACCCTCACAGAATCGGCCTCATTAAAGATGACAAACCGAATATGGAATTTAAGGATATTGAATTAAAGAAGAAAGAGGAATCGGAAAAAGAGAATTCGAATTTTAATTCGAAAAGGAAATCTCCACCAGCTAATTTCCCAAAAATCTCGGTACCAAATTTTATCACCTCCAGTGCACCGCTTTTATCTGATAAAATCGACAAAGGAAAGAATTATCTCCCACCGCCTCCTTCTGATTCATCGGTTAGTCAACTGCCTGGGCCCACAATTCTTAAATTCGGCCACATTGGATCTACATCAAGGAATGAATTGAACGTTGGATCCGACACTAAAGCTTTTCTCTCCAGCCCATCTACAAACCCTACGGCCCACAACTCAACTCAAGACCCAACATCTCCTCGACCGTTGGACCTCACCATCTTTAATGATCCACTAATTGAAGGCCCAATTGATCCGAGCCAACCGTACCAGAACTCTCCATCCCCGATAGACATCATGCCCCCACTGCAACAGAATCCTACCCATAATACCTCCTCTCCAAATCCATTGGAACCTCCACAAATCCTACCCTACCATTCCCCACGGCTTTCTCCAGTACCAAATATGAAGTCTCCAACACCGAACACATTTCCCAATTGCCTTCAACATTTAGCCCCGATCTTAAGTAAACATGGCCTTTGTATTATGGCTCTACCAACAGTACCAAAGTCAAGGGGCCGAGAATGTTATATGAAATTTTTGACATGGAATGTGCGTGGTTTGGGTTCATGGAAGAAAAGGGCTTTAATTAAGAAAACTATTCAGCAGCAAAACCCGGGCATTGTTCTTATTCAGGAGACTAAAAAATCTCAGATTTGTAGTAGGATTATTAAATCCCTATGGAGCTCTTCTCATATTGGTTGGACTTCTCTTGAATTTGTGGGTGCCTCTGGAGGCATTCTTATTATGTGGAGTGAACCAGAATTTTCAGTAAAGGAGACTATTCAAGGTCTTTTCACTCTCTCTATTCATATCTTTATGGCTGATAACTTCTCTTTTTGGCTATCGGCTATTTATGGCCCCTCTAGGCATGCTGACAGATCGGACTTTTGGAATGAACTTCACGACTTGGCTGGTTTAGGTGGTAACAATTGGATCCTTGGAGGAGATTTTAATGTCACCCGCTGGTCATGGGAAAAATCGCATGGCCGGCCCGTGACTAGGAGTATGCGTATTTTCAACCAATGGATCGATGATTACCATCTCATAGACACTCCTTTACAGAATGGATGCTACACGTGGTCCAGTTGTGGTGAAAATCATTATTGCTCATTGATTGATCGATTCTTAATGACGGATACCTGTCTCAATAAATTTGGTGCAGCTCGTTTTCTTCGTCTTGATAGGGTTACATCTGACCATTACCCATGTACTCTATCATTTGGGGATCTCTCTTGGGGCCCTTGTCCCTTTAGATTCGAGAATGCTTGGCTGAAAATAGACTCTTTTCGTGGTCTTATGGATAATTGGTGGTCTGAAAACACTGTTCAGGGTTGGCCAGGCCATGGGTTTATGATGAAACTTAAAGGGTTGAAATCTGAGCTCAGAAAATGGAATTTATCTCAGCGATCATCTGCTGCTCAACTTCCATCTCTTGTTACACAATTGAAATTGTTGGATGATACAGAGGACAGGACAGAGGAATGGATGGATTTATCACTTATTCTTTCCTCCATCAGCTTACAGAACCGTAATGATTCCTGGATATGGCCTTTGGAATCGTCCAATATTTTTTCTGTTAAATCTCTCATGGAAGATTTAGTAGACTATTCGAATATGGCAAATGATCTATATAAGGCCATTTGGACAGATTTCTATCCAAAGAAGATCAAGATTTTTCTATGGGAGCTTAGTCATGGTGCTATTAATACAGTTGATCGACTTCAACGACGGATGCCTCATTTTCACTTGTCTCCATCTTGGTGCATAATGTGTGCTGCTAGCTCAGAATATCCTGGGCATTTATTTGTTCATTGTACCTTTGCATCCAGATATTGGTCAGAGATTCTTGATGCTTTTGGATGGTCCACCGTTTTTCCAAATTGCATTAACGATGTTCTTAATCTCATTTTTGTGGATCATCCCTTTCATGGAGAAAAGAAGATTTTGTGGCTTGCCTTGAACAGAGTCTTCTTTTGGTTTTTATGGGGCGAACGAAATTCTAGAATTTTCAGAGATTCTTTCTCTTCCTTTCATAAATTTATGGATCTAATTCTCTTTCATGCTTTGTATTGGTGTAAATGTAAACACCCCTTCTCTGATTATAGTTTATCCTTTTTGATTTCCAATTGGAAAGCTTTTATGTAA

Coding sequence (CDS)

ATGAAAACCACAGAGGCTCACCCTGTTCAACCATGGAATCATTCTACCCGATCCATCTCCATAGATAGGAAAAATTTCACAATAGCTTTTGATGAACATTTTAGAGGAAGTAGAGCAAAGATCACCGAATATAGCAAATACTCATCCCATTCGATTTCTCTTTCTTGGAAATCTCTAAAATGGCTTGCCTCATCCTTCAACACCATTGCTCACTCACCATGTTCGCACAAGTTCTTCTCGGATTTAAGGAGCGACGACTATACTCTTTGGATCGAAAAGTTGAATAACAAGAATGGCTTCTTTGTCGAAGTCAACCAGGTGCAAAATTCTGGTAGTCGACAAAGGATACTTATTCCATCGGAGAATAACAAACAAGGATGGTTTTCTTTCTTCTCGTTAATCTCTGAATACCCCGCTGAAGCCCATCGACAGCCCACAAAGCCTTCTCCTACATCTTTCAAGGACGTCCTTCAATCAAAGCCTCCAATAGATACTATTACTCCTCCCTCGAAAGAGCCTTCAGCCTCCACAATTGATGAAGAATGGAATGAGATCATTGTTCTCCAACGCAGCAATCTTCATGATGACTGGCCGAGCATTCATCAATCACTTATTGCCGGGCAAGCCATTCGATGTTGCATCAATCCGTTCCAGGCAAATAAAGCCATGCTCCATGTGTATGATCGAGCCATTGCTACAAATTTATGCTCTCACTCCGATTGGACCTTTCTTGGTAAGCATAAGTTGAAATTTTATCCTTTAACCACTACTTCTACACAACAGGATATTATGACACCATCTTATGGAGGTTGGATTGAGATCTCTTCTCTTCCCCCTACCTTGTGGACTGAGCGTATTTTCCGGTTCATTGGGGATTCCTGCGGCGGTTTTGTGGAGACTTCTAACCTCACTAATAGGATGATTATCGCAACTGAGGCTAGGATAAAAATTCGGCCAAATACTTCTGGTTTCATTCCCACCGCCGTAAAGCTCACATCAGACCTTGCCGGCGTTGAACTCACGGTGCAGACCAAAGGCATTTCCGGCAACCCTCACAGAATCGGCCTCATTAAAGATGACAAACCGAATATGGAATTTAAGGATATTGAATTAAAGAAGAAAGAGGAATCGGAAAAAGAGAATTCGAATTTTAATTCGAAAAGGAAATCTCCACCAGCTAATTTCCCAAAAATCTCGGTACCAAATTTTATCACCTCCAGTGCACCGCTTTTATCTGATAAAATCGACAAAGGAAAGAATTATCTCCCACCGCCTCCTTCTGATTCATCGGTTAGTCAACTGCCTGGGCCCACAATTCTTAAATTCGGCCACATTGGATCTACATCAAGGAATGAATTGAACGTTGGATCCGACACTAAAGCTTTTCTCTCCAGCCCATCTACAAACCCTACGGCCCACAACTCAACTCAAGACCCAACATCTCCTCGACCGTTGGACCTCACCATCTTTAATGATCCACTAATTGAAGGCCCAATTGATCCGAGCCAACCGTACCAGAACTCTCCATCCCCGATAGACATCATGCCCCCACTGCAACAGAATCCTACCCATAATACCTCCTCTCCAAATCCATTGGAACCTCCACAAATCCTACCCTACCATTCCCCACGGCTTTCTCCAGTACCAAATATGAAGTCTCCAACACCGAACACATTTCCCAATTGCCTTCAACATTTAGCCCCGATCTTAAGTAAACATGGCCTTTGTATTATGGCTCTACCAACAGTACCAAAGTCAAGGGGCCGAGAATGTTATATGAAATTTTTGACATGGAATGTGCGTGGTTTGGGTTCATGGAAGAAAAGGGCTTTAATTAAGAAAACTATTCAGCAGCAAAACCCGGGCATTGTTCTTATTCAGGAGACTAAAAAATCTCAGATTTGTAGTAGGATTATTAAATCCCTATGGAGCTCTTCTCATATTGGTTGGACTTCTCTTGAATTTGTGGGTGCCTCTGGAGGCATTCTTATTATGTGGAGTGAACCAGAATTTTCAGTAAAGGAGACTATTCAAGGTCTTTTCACTCTCTCTATTCATATCTTTATGGCTGATAACTTCTCTTTTTGGCTATCGGCTATTTATGGCCCCTCTAGGCATGCTGACAGATCGGACTTTTGGAATGAACTTCACGACTTGGCTGGTTTAGGTGGTAACAATTGGATCCTTGGAGGAGATTTTAATGTCACCCGCTGGTCATGGGAAAAATCGCATGGCCGGCCCGTGACTAGGAGTATGCGTATTTTCAACCAATGGATCGATGATTACCATCTCATAGACACTCCTTTACAGAATGGATGCTACACGTGGTCCAGTTGTGGTGAAAATCATTATTGCTCATTGATTGATCGATTCTTAATGACGGATACCTGTCTCAATAAATTTGGTGCAGCTCGTTTTCTTCGTCTTGATAGGGTTACATCTGACCATTACCCATGTACTCTATCATTTGGGGATCTCTCTTGGGGCCCTTGTCCCTTTAGATTCGAGAATGCTTGGCTGAAAATAGACTCTTTTCGTGGTCTTATGGATAATTGGTGGTCTGAAAACACTGTTCAGGGTTGGCCAGGCCATGGGTTTATGATGAAACTTAAAGGGTTGAAATCTGAGCTCAGAAAATGGAATTTATCTCAGCGATCATCTGCTGCTCAACTTCCATCTCTTGTTACACAATTGAAATTGTTGGATGATACAGAGGACAGGACAGAGGAATGGATGGATTTATCACTTATTCTTTCCTCCATCAGCTTACAGAACCGTAATGATTCCTGGATATGGCCTTTGGAATCGTCCAATATTTTTTCTGTTAAATCTCTCATGGAAGATTTAGTAGACTATTCGAATATGGCAAATGATCTATATAAGGCCATTTGGACAGATTTCTATCCAAAGAAGATCAAGATTTTTCTATGGGAGCTTAGTCATGGTGCTATTAATACAGTTGATCGACTTCAACGACGGATGCCTCATTTTCACTTGTCTCCATCTTGGTGCATAATGTGTGCTGCTAGCTCAGAATATCCTGGGCATTTATTTGTTCATTGTACCTTTGCATCCAGATATTGGTCAGAGATTCTTGATGCTTTTGGATGGTCCACCGTTTTTCCAAATTGCATTAACGATGTTCTTAATCTCATTTTTGTGGATCATCCCTTTCATGGAGAAAAGAAGATTTTGTGGCTTGCCTTGAACAGAGTCTTCTTTTGGTTTTTATGGGGCGAACGAAATTCTAGAATTTTCAGAGATTCTTTCTCTTCCTTTCATAAATTTATGGATCTAATTCTCTTTCATGCTTTGTATTGGTGTAAATGTAAACACCCCTTCTCTGATTATAGTTTATCCTTTTTGATTTCCAATTGGAAAGCTTTTATGTAA

Protein sequence

MKTTEAHPVQPWNHSTRSISIDRKNFTIAFDEHFRGSRAKITEYSKYSSHSISLSWKSLKWLASSFNTIAHSPCSHKFFSDLRSDDYTLWIEKLNNKNGFFVEVNQVQNSGSRQRILIPSENNKQGWFSFFSLISEYPAEAHRQPTKPSPTSFKDVLQSKPPIDTITPPSKEPSASTIDEEWNEIIVLQRSNLHDDWPSIHQSLIAGQAIRCCINPFQANKAMLHVYDRAIATNLCSHSDWTFLGKHKLKFYPLTTTSTQQDIMTPSYGGWIEISSLPPTLWTERIFRFIGDSCGGFVETSNLTNRMIIATEARIKIRPNTSGFIPTAVKLTSDLAGVELTVQTKGISGNPHRIGLIKDDKPNMEFKDIELKKKEESEKENSNFNSKRKSPPANFPKISVPNFITSSAPLLSDKIDKGKNYLPPPPSDSSVSQLPGPTILKFGHIGSTSRNELNVGSDTKAFLSSPSTNPTAHNSTQDPTSPRPLDLTIFNDPLIEGPIDPSQPYQNSPSPIDIMPPLQQNPTHNTSSPNPLEPPQILPYHSPRLSPVPNMKSPTPNTFPNCLQHLAPILSKHGLCIMALPTVPKSRGRECYMKFLTWNVRGLGSWKKRALIKKTIQQQNPGIVLIQETKKSQICSRIIKSLWSSSHIGWTSLEFVGASGGILIMWSEPEFSVKETIQGLFTLSIHIFMADNFSFWLSAIYGPSRHADRSDFWNELHDLAGLGGNNWILGGDFNVTRWSWEKSHGRPVTRSMRIFNQWIDDYHLIDTPLQNGCYTWSSCGENHYCSLIDRFLMTDTCLNKFGAARFLRLDRVTSDHYPCTLSFGDLSWGPCPFRFENAWLKIDSFRGLMDNWWSENTVQGWPGHGFMMKLKGLKSELRKWNLSQRSSAAQLPSLVTQLKLLDDTEDRTEEWMDLSLILSSISLQNRNDSWIWPLESSNIFSVKSLMEDLVDYSNMANDLYKAIWTDFYPKKIKIFLWELSHGAINTVDRLQRRMPHFHLSPSWCIMCAASSEYPGHLFVHCTFASRYWSEILDAFGWSTVFPNCINDVLNLIFVDHPFHGEKKILWLALNRVFFWFLWGERNSRIFRDSFSSFHKFMDLILFHALYWCKCKHPFSDYSLSFLISNWKAFM
Homology
BLAST of Spg038760 vs. NCBI nr
Match: XP_022158956.1 (uncharacterized protein LOC111025405 [Momordica charantia])

HSP 1 Score: 335.1 bits (858), Expect = 2.3e-87
Identity = 159/314 (50.64%), Postives = 208/314 (66.24%), Query Frame = 0

Query: 593 MKFLTWNVRGLGSWKKRALIKKTIQQQNPGIVLIQETKKSQICSRIIKSLWSSSHIGWTS 652
           MKFLTWNVRGL SWKK ALIK+ I + NP +V++QETK S +   I+KSLWS+  I W++
Sbjct: 1   MKFLTWNVRGLDSWKKGALIKQFISRLNPNVVILQETKLSYMDILIVKSLWSAHGINWSA 60

Query: 653 LEFVGASGGILIMWSEPEFSVKETIQGLFTLSIHIFMADNFSFWLSAIYGPSRHADRSDF 712
           L+  G + GILI+W++P+    E I+G+F+L+I+  ++D F FW+S IYGPS       F
Sbjct: 61  LDASGMASGILILWNDPDLKAAEMIEGVFSLTINFCLSDGFLFWVSGIYGPSTTEFHYLF 120

Query: 713 WNELHDLAGLGGNNWILGGDFNVTRWSWEKSHGRPVTRSMRIFNQWIDDYHLIDTPLQNG 772
           W EL DL+ L  N+WIL GDFNVTRWSWEKS+GRP+T+SM +FN +I+D  LID PL NG
Sbjct: 121 WQELLDLSDLCENHWILAGDFNVTRWSWEKSNGRPLTKSMWLFNSFIEDSSLIDVPLTNG 180

Query: 773 CYTWSSCGENHYCSLIDRFLMTDTCLNKFGAARFLRLDRVTSDHYPCTLSFGDLSWGPCP 832
            +TWS    N   SLID FL+T+ C++K G     R+ R TSDH+P  L FG  +WG  P
Sbjct: 181 QHTWS---RNTSFSLIDCFLLTNGCIDKLGMPIAKRMTRTTSDHFPILLDFGQNNWGLTP 240

Query: 833 FRFENAWLKIDSFRGLMDNWWSENTVQGWPGHGFMMKLKGLKSELRKWNLSQ-RSSAAQL 892
           FRFEN WL   +F+  ++ WW    + GWPGHG MMKLK LK  ++ W     R   +Q 
Sbjct: 241 FRFENMWLSHKTFKPFLETWWGNKPLHGWPGHGLMMKLKSLKYAIKLWITEHFRCIHSQK 300

Query: 893 PSLVTQLKLLDDTE 906
             L   +  LDD E
Sbjct: 301 EDLTNLMNSLDDLE 311

BLAST of Spg038760 vs. NCBI nr
Match: TYJ99315.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 293.1 bits (749), Expect = 1.0e-74
Identity = 270/1027 (26.29%), Postives = 428/1027 (41.67%), Query Frame = 0

Query: 17   RSISIDRKNFTIAFDEHFRGSRAKITEYSKYSSHSISLSWKSLKWLASSFNTIAHSPCSH 76
            RS  ++RK F +  D++ + +   +TE   + + SI +S + L W+  +  ++  +P ++
Sbjct: 63   RSCKVERKEFVLHLDKYSKHTHYWLTETGAHKAFSIEVSPRDLDWIRCTLKSLIATPNTN 122

Query: 77   KFFSDLRSDDYTLWIEKLNNKNGFFVEVNQVQNSGSRQRILIPSENNKQGWFSFFSLISE 136
            +FF + R  +  +WI K  N  G   E+ +V     +  IL+P   +K GW SF S+I+ 
Sbjct: 123  RFFLETRDSEQRIWIRKTRNSKGCTAEIFRVDQKNRKSCILVPEGPDKSGWVSFLSMIT- 182

Query: 137  YPAEAHRQPTKPS--PTSFKDVLQSKPPID-------------------------TITPP 196
             P    +  T+P+  P +  D   S PPID                           +  
Sbjct: 183  -PKVEVKAKTRPTFLPRTSPDCRLS-PPIDYHKRSYAKAVTEGRPFATSDSSDSYDSSDS 242

Query: 197  SKEPSASTIDEEWNEI----IVLQRSNLHDDWPSIHQSLIAGQAIRCCINPFQANKAMLH 256
            S   S S  D   +++    +V+ R   HDDW  I Q+L          N F A KA++H
Sbjct: 243  SHSSSNSFCDSPSSDLLENTVVIVRRFFHDDWHKILQNLRKQTEESFTYNAFHAEKALVH 302

Query: 257  VYDRAIATNLCSHSDWTFLGKHKLKFYPLTTTSTQQDIMTPSYGGWIEISSLPPTLWTER 316
                  A  LC +  W+ +GK+ ++F   +        + PSYGGW     +P  LW   
Sbjct: 303  FSSNIPANLLCQNKGWSTVGKYSVRFEKWSPVYHATPKLIPSYGGWTTFRGIPLHLWNMM 362

Query: 317  IFRFIGDSCGGFVETSNLTNRMIIATEARIKIRPNTSGFIPTAVKLTSDLAG---VELTV 376
             F+ IG +C G ++ +  T       EARIK+R N SGF+P  V++  +      V++  
Sbjct: 363  TFQQIGKACEGLIKVAEETRSAKNLIEARIKVRYNYSGFLPANVRIFDNEGNKFFVQVVT 422

Query: 377  QTKG---ISGNPHRIGLIKDDKPNMEFKDIELKKK----EESEKENSNFNSK----RKSP 436
              +G   I  N    G  K  +    F D   + +    E SE  + +F S     RKS 
Sbjct: 423  HPEGKWLIERNVRLHGTFK-RQAAASFDDFNPESEQFFFEGSEAISPDFLSTSSDGRKSS 482

Query: 437  PANFPK-----ISVPNFITSSAPLLSDKIDKGKNYLPPPPSDSSVSQLPGPT---ILKFG 496
              + P      I  P+   +    L++++    N L    + S +  L G +   +L  G
Sbjct: 483  TPDQPSALKSVIIKPDRNATLPSFLNEELVNDSN-LHATANKSKLEILSGISNDGVLDKG 542

Query: 497  ----HIGSTSRNELNVG-SDTKAFLSSPSTNPTAHNSTQDPTSPRP------LDLTIFND 556
                 I     + LN+  S  K   +SPS      N    P +  P          +  +
Sbjct: 543  KQKVDIQLQPNSALNLDKSKRKVSFNSPSNKTNIFNPDSAPANHSPSLNSPEKKQKVSRE 602

Query: 557  PLIEGPIDPSQPYQ--NSPSPIDIMPPLQ------------------------QNPTHNT 616
              I+     +QP    N    + I  P+Q                         +P  + 
Sbjct: 603  RSIKKKSSSTQPNSKANQNKGVFITQPIQIVAHDRDAAKKGLSLTVDLGDLPALDPNKSL 662

Query: 617  SSPNPLEPPQILPYHSPRLSP-VPNMKSP---TPNTFPNCLQHLAPILSKHGLCIMALPT 676
               +  +  +++   +  + P  P MK P     N+           + K          
Sbjct: 663  EDHHNSDNAEVVDITNTEVVPETPEMKMPVNENSNSSSEANYRKPKHVHKRKYYYRKKEE 722

Query: 677  VPKSRGRECYMKFLTWNVRGLGSWKKRALIKKTIQQQNPGIVLIQETKKSQICS------ 736
              K    E + K L        SW K+  +K +    + G         +Q+ S      
Sbjct: 723  KEKDPDSEAFKKQLV-------SWLKKNGLKLSTDTDSSGATTSTNVLLNQMNSGLKITN 782

Query: 737  -RIIKSLWSSSHIGWTSLEFVGASGGILIMWSEPEFSVKETIQGLFTLSIHIFMADNFSF 796
             RIIKSLW S+ I W +    G+SGGILI+W     S+    +GLF+LS +  + +N S+
Sbjct: 783  KRIIKSLWPSNSINWIAKNASGSSGGILILWDAQNHSLLSQEEGLFSLSANFLLNNNSSW 842

Query: 797  WLSAIYGPSRHADRSDFWNELHDLAGLGGNNWILGGDFNVTRWSWEKSHGRPVTRSMRIF 856
            WL+ +YGP +  +R  FW ELH+L  L    WILGGD NV R   E +     + + R+ 
Sbjct: 843  WLTGLYGPVKRRERIHFWAELHNLQHLNSFPWILGGDLNVIRMREESTSVLSSSHNSRML 902

Query: 857  NQWIDDYHLIDTPLQNGCYTWSSCGENHYCSLIDRFLMTDTCLNKFGAARFLRLDRVTSD 916
            N +I +  LID PL N  +TWS+       S IDRFL   +  N F       L R TSD
Sbjct: 903  NNFISNNLLIDPPLTNNRFTWSNLRNPPTFSRIDRFLYNSSWENLFSPHTTRTLPRSTSD 962

Query: 917  HYP--CTLSFGDLSWGPCPFRFENAWLKIDSFRGLMDNWWSENTVQGWPGHGFMMKLKGL 933
            H+P  C  S   LSWGP PFR  +  L    F+  M  WW  +   G+PG  F+ +LK L
Sbjct: 963  HFPLVCEDSNPKLSWGPIPFRLNSITLSDPEFKRNMGRWWENSIQAGYPGFSFIQRLKSL 1022

BLAST of Spg038760 vs. NCBI nr
Match: RVX11275.1 (LINE-1 retrotransposable element ORF2 protein [Vitis vinifera])

HSP 1 Score: 277.7 bits (709), Expect = 4.4e-70
Identity = 133/293 (45.39%), Postives = 181/293 (61.77%), Query Frame = 0

Query: 589 RECYMKFLTWNVRGLGSWKKRALIKKTIQQQNPGIVLIQETKKSQICSRIIKSLWSSSHI 648
           R  +MK ++WN RGLGS KKR ++K  +  + P +V+IQETKK +   R++ S+WS  + 
Sbjct: 54  RVFHMKIISWNTRGLGSKKKRRVVKNFLSSEKPDVVMIQETKKEECDRRLVGSVWSVRNK 113

Query: 649 GWTSLEFVGASGGILIMWSEPEFSVKETIQGLFTLSIHIFMADNFSFWLSAIYGPSRHAD 708
            W +L   GASGGILI+W   +   +E + G F++SI   M +  S WLSA+YGP+  A 
Sbjct: 114 DWAALPASGASGGILIIWDSKKLRREEVVLGSFSVSIKFAMDECESLWLSAVYGPNNSAL 173

Query: 709 RSDFWNELHDLAGLGGNNWILGGDFNVTRWSWEKSHGRPVTRSMRIFNQWIDDYHLIDTP 768
           R DFW EL D+AGL    W +GGDFNV R S EK  G  +T  M+ F+++I D  LID+P
Sbjct: 174 RKDFWVELSDIAGLSHPRWCVGGDFNVIRRSSEKLGGSRLTPCMKDFDEFIRDCELIDSP 233

Query: 769 LQNGCYTWSSCGENHYCSLIDRFLMTDTCLNKFGAARFLRLDRVTSDHYPCTLSFGDLSW 828
           L++  YTWS+  EN  C  +DRFL ++     F  +    L R TSDH+P  L      W
Sbjct: 234 LRSASYTWSNMQENPVCKRLDRFLYSNEWEQVFPQSLQGVLPRWTSDHWPIVLETNPFKW 293

Query: 829 GPCPFRFENAWLKIDSFRGLMDNWWSENTVQGWPGHGFMMKLKGLKSELRKWN 882
           GP PFRFEN WL+  SF+     WWSE    GW GH FM KL+ +K++L++WN
Sbjct: 294 GPTPFRFENMWLQHSSFKENFGRWWSEFQGNGWEGHKFMRKLQFVKAKLKEWN 346

BLAST of Spg038760 vs. NCBI nr
Match: RVX11275.1 (LINE-1 retrotransposable element ORF2 protein [Vitis vinifera])

HSP 1 Score: 101.3 bits (251), Expect = 5.7e-17
Identity = 56/168 (33.33%), Postives = 77/168 (45.83%), Query Frame = 0

Query: 928  DSWIWPLESSNIFSVKSLMEDLVDYSNMANDL-YKAIWTDFYPKKIKIFLWELSHGAINT 987
            D   W +  S +F+VKS    L  Y         K +W    P K+K F+W ++H  +NT
Sbjct: 1021 DKRSWSISPSGLFTVKSFFLALSQYFESPPVFPTKFVWNSQVPFKVKSFVWLVAHKKLNT 1080

Query: 988  VDRLQRRMPHFHLSPSWCIMCAASSEYPGHLFVHCTFASRYWSEILDAFGWSTVFPNCIN 1047
             D LQ R PH  LSP+ C +C    E   HLF+HC+     W  +        V P  I+
Sbjct: 1081 NDLLQLRRPHKALSPNICKLCMKHGETVDHLFLHCSLTKGLWHRLFQLAKMDWVSPRSIS 1140

Query: 1048 DVLNLIFVDHPFHGEKK---ILWLALNRVFFWFLWGERNSRIFRDSFS 1092
            D   + F +    G  K   +LW        W +W ERN+RIF D F+
Sbjct: 1141 D---MFFTNFNGFGSSKRGVVLWQDACIALMWVVWRERNARIFEDKFA 1185


HSP 2 Score: 277.3 bits (708), Expect = 5.8e-70
Identity = 202/776 (26.03%), Postives = 293/776 (37.76%), Query Frame = 0

Query: 594  KFLTWNVRGLGSWKKRALIKKTIQQQNPGIVLIQETKKSQICSRIIKSLWSSSHIGWTSL 653
            K L+WN RGLGS  K  ++++ +  Q+P +V++QETK+     R + S+W    + W +L
Sbjct: 278  KILSWNTRGLGSKNKMRIVRRFLSSQSPDVVMLQETKREIWDRRFVSSVWKGRSMEWAAL 337

Query: 654  EFVGASGGILIMWSEPEFSVKETIQGLFTLSIHIFMADNFSFWLSAIYGPSRHADRSDFW 713
               GASGGI+IMW   +F   E + G F++++ +   +  SFWL+++YGP++   R DFW
Sbjct: 338  PACGASGGIVIMWDSNKFKFTEKVLGSFSVTVKLNSGEEGSFWLTSVYGPNKPLWRKDFW 397

Query: 714  NELHDLAGLGGNNWILGGDFNVTRWSWEKSHGRPVTRSMRIFNQWIDDYHLIDTPLQNGC 773
             EL DL GL    W +GG+FNV R   EK      T +MR F+++I +  L+D  L+N  
Sbjct: 398  LELQDLYGLTFPIWCVGGNFNVIRRISEKLGDSRSTFNMRCFDEFIRESGLLDPTLRNAA 457

Query: 774  YTWSSCGENHYCSLIDRFLMTDTCLNKFGAARFLRLDRVTSDHYPCTLSFGDLSWGPCPF 833
            +TWS+   +     +DRFL +    + F  +    L R TSDH P  L    L WGP PF
Sbjct: 458  FTWSNMQVDSIFKRLDRFLFSSEWDSFFSQSLQEALPRWTSDHNPICLETNPLKWGPTPF 517

Query: 834  RFENAWLKIDSFRGLMDNWWSENTVQGWPGHGFMMKLKGLKSELRKWN------------ 893
            RFEN WL    F+    +WW E TV+GW GH FM KLK +KS+L+ WN            
Sbjct: 518  RFENMWLLHLEFKEKFSDWWQECTVEGWEGHKFMRKLKFVKSKLKDWNKVAFGDLREEKT 577

Query: 894  -------LSQRSSAAQLPSLV--------------------------------------- 953
                    + R +   + SL+                                       
Sbjct: 578  HSFGLRMANGRRNRKFIESLIFERGVTLSNIEEIVNLFGKLYSKPEGASWRVEGVDWVPI 637

Query: 954  ----------------TQLKLLDDTEDRT------------EEW---------------- 1013
                             ++ +    +++T            E W                
Sbjct: 638  QGESAVCLDKPFFEEEVRMAVFHLNKEKTPGLNGFTIAVYQEYWDVIKEDLMRVFLEFHT 697

Query: 1014 -----------------------------MDLSLILSSISLQNRND-------------- 1073
                                         +D  LI + +  + R                
Sbjct: 698  NGIINQRRLRKVFHEVFGSQGAFVEGRHILDAMLIANEVVDEKRRSGEEGVVFKIDFKKA 757

Query: 1074 -----------------------SWIWPLESSNIFSVK---------------------- 1129
                                   SWI    SS+ F++                       
Sbjct: 758  YDHVDWGFLDHVLERKGFSPKWRSWIRGCLSSSSFAILVNGNAKGWVKASRGLRQGDPLS 817

BLAST of Spg038760 vs. NCBI nr
Match: CAN69126.1 (hypothetical protein VITISV_008195 [Vitis vinifera])

HSP 1 Score: 275.0 bits (702), Expect = 2.9e-69
Identity = 134/295 (45.42%), Postives = 181/295 (61.36%), Query Frame = 0

Query: 587  RGRECYMKFLTWNVRGLGSWKKRALIKKTIQQQNPGIVLIQETKKSQICSRIIKSLWSSS 646
            R R  +MK ++WN RGLGS KKR ++K  +  + P +V+IQETKK +   R++ S+WS  
Sbjct: 751  RVRLFHMKIISWNTRGLGSKKKRRVVKNFLSSEKPDVVMIQETKKEECDRRLVGSVWSVR 810

Query: 647  HIGWTSLEFVGASGGILIMWSEPEFSVKETIQGLFTLSIHIFMADNFSFWLSAIYGPSRH 706
            +  W +L   GASGGILI+W   +   +E + G F++SI   M    S WLSA+YGP+  
Sbjct: 811  NKDWAALPASGASGGILIIWDSIKMRREEVVLGSFSVSIKFAMDGCESLWLSAVYGPNNS 870

Query: 707  ADRSDFWNELHDLAGLGGNNWILGGDFNVTRWSWEKSHGRPVTRSMRIFNQWIDDYHLID 766
            A R DFW EL D+AGL    W +GGDFNV R S EK  G  +T  M+ F+++I D  LID
Sbjct: 871  ALRKDFWVELSDIAGLSHPRWCVGGDFNVIRRSSEKLGGSRLTPCMKDFDEFIRDCELID 930

Query: 767  TPLQNGCYTWSSCGENHYCSLIDRFLMTDTCLNKFGAARFLRLDRVTSDHYPCTLSFGDL 826
            +PL++  YTWS+  EN  C  +DRFL ++     F  +    L R TSDH+P  L     
Sbjct: 931  SPLRSVSYTWSNMQENPVCKRLDRFLYSNEWEQVFPQSLQGVLPRWTSDHWPIVLETNPF 990

Query: 827  SWGPCPFRFENAWLKIDSFRGLMDNWWSENTVQGWPGHGFMMKLKGLKSELRKWN 882
             WGP PFRFEN WL+  SF+     WWSE    GW GH FM KL+ +K++L++WN
Sbjct: 991  KWGPTPFRFENMWLQHSSFKENFGRWWSEFQGNGWEGHKFMRKLQFVKAKLKEWN 1045

BLAST of Spg038760 vs. ExPASy TrEMBL
Match: A0A6J1E2G6 (uncharacterized protein LOC111025405 OS=Momordica charantia OX=3673 GN=LOC111025405 PE=4 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 1.1e-87
Identity = 159/314 (50.64%), Postives = 208/314 (66.24%), Query Frame = 0

Query: 593 MKFLTWNVRGLGSWKKRALIKKTIQQQNPGIVLIQETKKSQICSRIIKSLWSSSHIGWTS 652
           MKFLTWNVRGL SWKK ALIK+ I + NP +V++QETK S +   I+KSLWS+  I W++
Sbjct: 1   MKFLTWNVRGLDSWKKGALIKQFISRLNPNVVILQETKLSYMDILIVKSLWSAHGINWSA 60

Query: 653 LEFVGASGGILIMWSEPEFSVKETIQGLFTLSIHIFMADNFSFWLSAIYGPSRHADRSDF 712
           L+  G + GILI+W++P+    E I+G+F+L+I+  ++D F FW+S IYGPS       F
Sbjct: 61  LDASGMASGILILWNDPDLKAAEMIEGVFSLTINFCLSDGFLFWVSGIYGPSTTEFHYLF 120

Query: 713 WNELHDLAGLGGNNWILGGDFNVTRWSWEKSHGRPVTRSMRIFNQWIDDYHLIDTPLQNG 772
           W EL DL+ L  N+WIL GDFNVTRWSWEKS+GRP+T+SM +FN +I+D  LID PL NG
Sbjct: 121 WQELLDLSDLCENHWILAGDFNVTRWSWEKSNGRPLTKSMWLFNSFIEDSSLIDVPLTNG 180

Query: 773 CYTWSSCGENHYCSLIDRFLMTDTCLNKFGAARFLRLDRVTSDHYPCTLSFGDLSWGPCP 832
            +TWS    N   SLID FL+T+ C++K G     R+ R TSDH+P  L FG  +WG  P
Sbjct: 181 QHTWS---RNTSFSLIDCFLLTNGCIDKLGMPIAKRMTRTTSDHFPILLDFGQNNWGLTP 240

Query: 833 FRFENAWLKIDSFRGLMDNWWSENTVQGWPGHGFMMKLKGLKSELRKWNLSQ-RSSAAQL 892
           FRFEN WL   +F+  ++ WW    + GWPGHG MMKLK LK  ++ W     R   +Q 
Sbjct: 241 FRFENMWLSHKTFKPFLETWWGNKPLHGWPGHGLMMKLKSLKYAIKLWITEHFRCIHSQK 300

Query: 893 PSLVTQLKLLDDTE 906
             L   +  LDD E
Sbjct: 301 EDLTNLMNSLDDLE 311

BLAST of Spg038760 vs. ExPASy TrEMBL
Match: A0A5D3BLV7 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005290 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 4.9e-75
Identity = 270/1027 (26.29%), Postives = 428/1027 (41.67%), Query Frame = 0

Query: 17   RSISIDRKNFTIAFDEHFRGSRAKITEYSKYSSHSISLSWKSLKWLASSFNTIAHSPCSH 76
            RS  ++RK F +  D++ + +   +TE   + + SI +S + L W+  +  ++  +P ++
Sbjct: 63   RSCKVERKEFVLHLDKYSKHTHYWLTETGAHKAFSIEVSPRDLDWIRCTLKSLIATPNTN 122

Query: 77   KFFSDLRSDDYTLWIEKLNNKNGFFVEVNQVQNSGSRQRILIPSENNKQGWFSFFSLISE 136
            +FF + R  +  +WI K  N  G   E+ +V     +  IL+P   +K GW SF S+I+ 
Sbjct: 123  RFFLETRDSEQRIWIRKTRNSKGCTAEIFRVDQKNRKSCILVPEGPDKSGWVSFLSMIT- 182

Query: 137  YPAEAHRQPTKPS--PTSFKDVLQSKPPID-------------------------TITPP 196
             P    +  T+P+  P +  D   S PPID                           +  
Sbjct: 183  -PKVEVKAKTRPTFLPRTSPDCRLS-PPIDYHKRSYAKAVTEGRPFATSDSSDSYDSSDS 242

Query: 197  SKEPSASTIDEEWNEI----IVLQRSNLHDDWPSIHQSLIAGQAIRCCINPFQANKAMLH 256
            S   S S  D   +++    +V+ R   HDDW  I Q+L          N F A KA++H
Sbjct: 243  SHSSSNSFCDSPSSDLLENTVVIVRRFFHDDWHKILQNLRKQTEESFTYNAFHAEKALVH 302

Query: 257  VYDRAIATNLCSHSDWTFLGKHKLKFYPLTTTSTQQDIMTPSYGGWIEISSLPPTLWTER 316
                  A  LC +  W+ +GK+ ++F   +        + PSYGGW     +P  LW   
Sbjct: 303  FSSNIPANLLCQNKGWSTVGKYSVRFEKWSPVYHATPKLIPSYGGWTTFRGIPLHLWNMM 362

Query: 317  IFRFIGDSCGGFVETSNLTNRMIIATEARIKIRPNTSGFIPTAVKLTSDLAG---VELTV 376
             F+ IG +C G ++ +  T       EARIK+R N SGF+P  V++  +      V++  
Sbjct: 363  TFQQIGKACEGLIKVAEETRSAKNLIEARIKVRYNYSGFLPANVRIFDNEGNKFFVQVVT 422

Query: 377  QTKG---ISGNPHRIGLIKDDKPNMEFKDIELKKK----EESEKENSNFNSK----RKSP 436
              +G   I  N    G  K  +    F D   + +    E SE  + +F S     RKS 
Sbjct: 423  HPEGKWLIERNVRLHGTFK-RQAAASFDDFNPESEQFFFEGSEAISPDFLSTSSDGRKSS 482

Query: 437  PANFPK-----ISVPNFITSSAPLLSDKIDKGKNYLPPPPSDSSVSQLPGPT---ILKFG 496
              + P      I  P+   +    L++++    N L    + S +  L G +   +L  G
Sbjct: 483  TPDQPSALKSVIIKPDRNATLPSFLNEELVNDSN-LHATANKSKLEILSGISNDGVLDKG 542

Query: 497  ----HIGSTSRNELNVG-SDTKAFLSSPSTNPTAHNSTQDPTSPRP------LDLTIFND 556
                 I     + LN+  S  K   +SPS      N    P +  P          +  +
Sbjct: 543  KQKVDIQLQPNSALNLDKSKRKVSFNSPSNKTNIFNPDSAPANHSPSLNSPEKKQKVSRE 602

Query: 557  PLIEGPIDPSQPYQ--NSPSPIDIMPPLQ------------------------QNPTHNT 616
              I+     +QP    N    + I  P+Q                         +P  + 
Sbjct: 603  RSIKKKSSSTQPNSKANQNKGVFITQPIQIVAHDRDAAKKGLSLTVDLGDLPALDPNKSL 662

Query: 617  SSPNPLEPPQILPYHSPRLSP-VPNMKSP---TPNTFPNCLQHLAPILSKHGLCIMALPT 676
               +  +  +++   +  + P  P MK P     N+           + K          
Sbjct: 663  EDHHNSDNAEVVDITNTEVVPETPEMKMPVNENSNSSSEANYRKPKHVHKRKYYYRKKEE 722

Query: 677  VPKSRGRECYMKFLTWNVRGLGSWKKRALIKKTIQQQNPGIVLIQETKKSQICS------ 736
              K    E + K L        SW K+  +K +    + G         +Q+ S      
Sbjct: 723  KEKDPDSEAFKKQLV-------SWLKKNGLKLSTDTDSSGATTSTNVLLNQMNSGLKITN 782

Query: 737  -RIIKSLWSSSHIGWTSLEFVGASGGILIMWSEPEFSVKETIQGLFTLSIHIFMADNFSF 796
             RIIKSLW S+ I W +    G+SGGILI+W     S+    +GLF+LS +  + +N S+
Sbjct: 783  KRIIKSLWPSNSINWIAKNASGSSGGILILWDAQNHSLLSQEEGLFSLSANFLLNNNSSW 842

Query: 797  WLSAIYGPSRHADRSDFWNELHDLAGLGGNNWILGGDFNVTRWSWEKSHGRPVTRSMRIF 856
            WL+ +YGP +  +R  FW ELH+L  L    WILGGD NV R   E +     + + R+ 
Sbjct: 843  WLTGLYGPVKRRERIHFWAELHNLQHLNSFPWILGGDLNVIRMREESTSVLSSSHNSRML 902

Query: 857  NQWIDDYHLIDTPLQNGCYTWSSCGENHYCSLIDRFLMTDTCLNKFGAARFLRLDRVTSD 916
            N +I +  LID PL N  +TWS+       S IDRFL   +  N F       L R TSD
Sbjct: 903  NNFISNNLLIDPPLTNNRFTWSNLRNPPTFSRIDRFLYNSSWENLFSPHTTRTLPRSTSD 962

Query: 917  HYP--CTLSFGDLSWGPCPFRFENAWLKIDSFRGLMDNWWSENTVQGWPGHGFMMKLKGL 933
            H+P  C  S   LSWGP PFR  +  L    F+  M  WW  +   G+PG  F+ +LK L
Sbjct: 963  HFPLVCEDSNPKLSWGPIPFRLNSITLSDPEFKRNMGRWWENSIQAGYPGFSFIQRLKSL 1022

BLAST of Spg038760 vs. ExPASy TrEMBL
Match: A0A438JQQ0 (LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=LORF2_64 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 2.1e-70
Identity = 133/293 (45.39%), Postives = 181/293 (61.77%), Query Frame = 0

Query: 589 RECYMKFLTWNVRGLGSWKKRALIKKTIQQQNPGIVLIQETKKSQICSRIIKSLWSSSHI 648
           R  +MK ++WN RGLGS KKR ++K  +  + P +V+IQETKK +   R++ S+WS  + 
Sbjct: 54  RVFHMKIISWNTRGLGSKKKRRVVKNFLSSEKPDVVMIQETKKEECDRRLVGSVWSVRNK 113

Query: 649 GWTSLEFVGASGGILIMWSEPEFSVKETIQGLFTLSIHIFMADNFSFWLSAIYGPSRHAD 708
            W +L   GASGGILI+W   +   +E + G F++SI   M +  S WLSA+YGP+  A 
Sbjct: 114 DWAALPASGASGGILIIWDSKKLRREEVVLGSFSVSIKFAMDECESLWLSAVYGPNNSAL 173

Query: 709 RSDFWNELHDLAGLGGNNWILGGDFNVTRWSWEKSHGRPVTRSMRIFNQWIDDYHLIDTP 768
           R DFW EL D+AGL    W +GGDFNV R S EK  G  +T  M+ F+++I D  LID+P
Sbjct: 174 RKDFWVELSDIAGLSHPRWCVGGDFNVIRRSSEKLGGSRLTPCMKDFDEFIRDCELIDSP 233

Query: 769 LQNGCYTWSSCGENHYCSLIDRFLMTDTCLNKFGAARFLRLDRVTSDHYPCTLSFGDLSW 828
           L++  YTWS+  EN  C  +DRFL ++     F  +    L R TSDH+P  L      W
Sbjct: 234 LRSASYTWSNMQENPVCKRLDRFLYSNEWEQVFPQSLQGVLPRWTSDHWPIVLETNPFKW 293

Query: 829 GPCPFRFENAWLKIDSFRGLMDNWWSENTVQGWPGHGFMMKLKGLKSELRKWN 882
           GP PFRFEN WL+  SF+     WWSE    GW GH FM KL+ +K++L++WN
Sbjct: 294 GPTPFRFENMWLQHSSFKENFGRWWSEFQGNGWEGHKFMRKLQFVKAKLKEWN 346

BLAST of Spg038760 vs. ExPASy TrEMBL
Match: A0A438JQQ0 (LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=LORF2_64 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 2.7e-17
Identity = 56/168 (33.33%), Postives = 77/168 (45.83%), Query Frame = 0

Query: 928  DSWIWPLESSNIFSVKSLMEDLVDYSNMANDL-YKAIWTDFYPKKIKIFLWELSHGAINT 987
            D   W +  S +F+VKS    L  Y         K +W    P K+K F+W ++H  +NT
Sbjct: 1021 DKRSWSISPSGLFTVKSFFLALSQYFESPPVFPTKFVWNSQVPFKVKSFVWLVAHKKLNT 1080

Query: 988  VDRLQRRMPHFHLSPSWCIMCAASSEYPGHLFVHCTFASRYWSEILDAFGWSTVFPNCIN 1047
             D LQ R PH  LSP+ C +C    E   HLF+HC+     W  +        V P  I+
Sbjct: 1081 NDLLQLRRPHKALSPNICKLCMKHGETVDHLFLHCSLTKGLWHRLFQLAKMDWVSPRSIS 1140

Query: 1048 DVLNLIFVDHPFHGEKK---ILWLALNRVFFWFLWGERNSRIFRDSFS 1092
            D   + F +    G  K   +LW        W +W ERN+RIF D F+
Sbjct: 1141 D---MFFTNFNGFGSSKRGVVLWQDACIALMWVVWRERNARIFEDKFA 1185


HSP 2 Score: 275.0 bits (702), Expect = 1.4e-69
Identity = 134/295 (45.42%), Postives = 181/295 (61.36%), Query Frame = 0

Query: 587  RGRECYMKFLTWNVRGLGSWKKRALIKKTIQQQNPGIVLIQETKKSQICSRIIKSLWSSS 646
            R R  +MK ++WN RGLGS KKR ++K  +  + P +V+IQETKK +   R++ S+WS  
Sbjct: 751  RVRLFHMKIISWNTRGLGSKKKRRVVKNFLSSEKPDVVMIQETKKEECDRRLVGSVWSVR 810

Query: 647  HIGWTSLEFVGASGGILIMWSEPEFSVKETIQGLFTLSIHIFMADNFSFWLSAIYGPSRH 706
            +  W +L   GASGGILI+W   +   +E + G F++SI   M    S WLSA+YGP+  
Sbjct: 811  NKDWAALPASGASGGILIIWDSIKMRREEVVLGSFSVSIKFAMDGCESLWLSAVYGPNNS 870

Query: 707  ADRSDFWNELHDLAGLGGNNWILGGDFNVTRWSWEKSHGRPVTRSMRIFNQWIDDYHLID 766
            A R DFW EL D+AGL    W +GGDFNV R S EK  G  +T  M+ F+++I D  LID
Sbjct: 871  ALRKDFWVELSDIAGLSHPRWCVGGDFNVIRRSSEKLGGSRLTPCMKDFDEFIRDCELID 930

Query: 767  TPLQNGCYTWSSCGENHYCSLIDRFLMTDTCLNKFGAARFLRLDRVTSDHYPCTLSFGDL 826
            +PL++  YTWS+  EN  C  +DRFL ++     F  +    L R TSDH+P  L     
Sbjct: 931  SPLRSVSYTWSNMQENPVCKRLDRFLYSNEWEQVFPQSLQGVLPRWTSDHWPIVLETNPF 990

Query: 827  SWGPCPFRFENAWLKIDSFRGLMDNWWSENTVQGWPGHGFMMKLKGLKSELRKWN 882
             WGP PFRFEN WL+  SF+     WWSE    GW GH FM KL+ +K++L++WN
Sbjct: 991  KWGPTPFRFENMWLQHSSFKENFGRWWSEFQGNGWEGHKFMRKLQFVKAKLKEWN 1045

BLAST of Spg038760 vs. ExPASy TrEMBL
Match: A0A5A7TTA1 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G001820 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 3.1e-69
Identity = 240/939 (25.56%), Postives = 401/939 (42.71%), Query Frame = 0

Query: 13  NHSTRSISIDRKNFTIAFDEHFRGSRAKITEYSKYSSHSISLSWKSLKWLASSFNTIAHS 72
           N   R  S+++K F ++ D+  R S   ITE   Y S SI+++  SL+WL  +F  + ++
Sbjct: 5   NQLPRHCSVEKKEFVLSVDKRSRESNLLITEVGPYKSFSIAITPDSLEWLKMTFKALLNT 64

Query: 73  PCSHKFFSDLRSDDYTLWIEKLNNKNGFFVEVNQVQNSGSRQRILIPSENNKQGWFSFFS 132
           P + +FF + R  D+ LW++ ++N+ G+  E+ +V + G +  IL+P   +K GW  F  
Sbjct: 65  PRTTRFFVEKRYVDFCLWVQTIHNRRGYIAEIYRVDDRGRKCCILVPEGLDKTGWALFND 124

Query: 133 LIS-EYPAEAHRQPTK----------PSPTSFKDVLQSKPPIDTITPPSKEPSASTIDE- 192
           +++ +  ++    PT+              S+     S+ P  T        S+S+  E 
Sbjct: 125 MLTCKKTSDKKETPTRHYYNQDKGKEKIQQSYDSSTDSESPRKTYAEAVSSSSSSSSSES 184

Query: 193 ---EWNEIIVLQRSNLHDDWPSIHQSLIAGQAIR-CCIN--PFQANKAMLHVYDRAIATN 252
              +      L+R   HDDW  I   L      +  C    PF A+KA+L + D+ +A  
Sbjct: 185 DCSKTKSTSSLKRRCFHDDWAKIIDRLRDQTDKKDSCFRYIPFHADKALLFIKDKELAKL 244

Query: 253 LCSHSDWTFLGKHKLKFYPLTTTSTQQDIMTPSYGGWIEISSLPPTLWTERIFRFIGDSC 312
           LC +  WT +G   +KF   +  +     + PSYGGW     +P  +W    F  IG++ 
Sbjct: 245 LCKNIGWTTVGPFYVKFEKWSKNAHADTKVIPSYGGWTRFRGIPLHIWNLNTFIQIGEAY 304

Query: 313 GGFVETSNLTNRMIIATEARIKIRPNTSGFIPTAVKLTSDLAGVELTVQT----KG---- 372
           GGF++ +  +   +  TEA IK++ N +GF+P  +++  D  G +  +QT    KG    
Sbjct: 305 GGFIDAAPESVNKLELTEALIKVKENYTGFLPAFIQI-HDEEGHDFIIQTVTHPKGKWLR 364

Query: 373 -----ISGNPHRIGLIKDDKPNMEFKDIELKKK----------EESEKENSNFNSKRKSP 432
                I G+  +      ++ N   +    ++           E S+K +   N+ RK  
Sbjct: 365 ERNPSIHGSFTKTAAENFNEFNPYAEQYTFRRNLAVIAKPDLPESSKKGSKQMNNDRKMG 424

Query: 433 PANFPK--ISVPNFITSSAPLLSDKIDKGKNYLPPPPSDSSVSQLPGPTILKFGHIGSTS 492
           P    K      +F+  +    SD  +  +             +  G  I      G  +
Sbjct: 425 PTKTIKKFNKTVSFLNLNYEGDSDNSNSSEKIQKKDHRSEMTEKKKGKQIC----CGEYN 484

Query: 493 RNELNVGSDTKAFLSSPSTNPTAHNSTQDPTSPRPLDLTIFNDPLIEGPIDPSQPYQNSP 552
           +    + +  K   SSP       ++   PT    L                      SP
Sbjct: 485 QKISPINTKRKVSFSSPKNETFLFSAHSAPTKTLKL---------------------GSP 544

Query: 553 SPIDIMPPLQQNPTHNTSSPNPLEPPQILPYHSPRLSPVPNMKSPTPNTFPNC--LQHLA 612
                M    + PT +          + +   + + S   +     PN F     L H++
Sbjct: 545 MSYAKMEAKSKRPTQSIKKKVYRVKSRSMERETSQTSRQKDKGKIDPNEFELVVDLGHIS 604

Query: 613 PILSKHGLCIMALPTVPKSRGRECYMKFLTWNVRGLGSWKKRALIKKTIQQQNPGIVLIQ 672
            +LS         P+   S         +  ++  + +       KK  +++N    + +
Sbjct: 605 -LLSDTDFSCPESPSYIPSPTSPTESDIVKDSLASMMTCAHEDREKK--KKEN----IRE 664

Query: 673 ETKKSQICSRIIKSLWSSSHIGWTSLEF------VGASGGILIMWSEPEFSV----KETI 732
           ET+  ++  +   + W   +    + +F      V     I I+   P   V    ++ I
Sbjct: 665 ETEDDEVSFKRKLTDWLKENNLRLAADFNSQFNSVTNDRMISILNGPPNVGVENVSEDVI 724

Query: 733 QGLFTLSIHIFMADNFSFWLSAIYGPSRHADRSDFWNELHDLAGLGGNNWILGGDFNVTR 792
            G F++SI +   +  S+WLSAIYGP++  +R  FW EL +L  +    WILGGDFNV R
Sbjct: 725 DGAFSVSIQVDSNNGASWWLSAIYGPAKRKNRPLFWEELENLKSICFPTWILGGDFNVIR 784

Query: 793 WSWEKSHGRPVTRSMRIFNQWIDDYHLIDTPLQNGCYTWSSCGENHYCSLIDRFLMTDTC 852
           W  E S   P + SM+ FN +I + +LID PL N  +TWS+       S +DRFL +   
Sbjct: 785 WKEETSTKNPASLSMKRFNTFISNCNLIDPPLTNAKFTWSNLRAQATLSRLDRFLFSTHW 844

Query: 853 LNKFGAARFLRLDRVTSDHYPCTLSFGDLSWGPCPFRFENAWLKIDSFRGLMDNWWSENT 884
            N F       L R TSDH+P  L    +SWGP PFRF NA+LK   ++  ++ WW   +
Sbjct: 845 ENIFPGHTSKVLTRTTSDHFPIVLESSSISWGPSPFRFTNAYLKDPDYKKNIEFWWGNTS 904

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022158956.12.3e-8750.64uncharacterized protein LOC111025405 [Momordica charantia][more]
TYJ99315.11.0e-7426.29LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa][more]
RVX11275.14.4e-7045.39LINE-1 retrotransposable element ORF2 protein [Vitis vinifera][more]
RVX11275.15.7e-1733.33LINE-1 retrotransposable element ORF2 protein [Vitis vinifera][more]
CAN69126.12.9e-6945.42hypothetical protein VITISV_008195 [Vitis vinifera][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1E2G61.1e-8750.64uncharacterized protein LOC111025405 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A5D3BLV74.9e-7526.29LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... [more]
A0A438JQQ02.1e-7045.39LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=LORF... [more]
A0A438JQQ02.7e-1733.33LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=LORF... [more]
A0A5A7TTA13.1e-6925.56DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10Endonuclease/exonuclease/phosphatasecoord: 589..823
e-value: 2.7E-39
score: 137.3
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 591..823
IPR005135Endonuclease/exonuclease/phosphatasePFAMPF14529Exo_endo_phos_2coord: 699..818
e-value: 1.0E-7
score: 31.8
IPR025558Domain of unknown function DUF4283PFAMPF14111DUF4283coord: 181..317
e-value: 1.1E-11
score: 44.5
IPR026960Reverse transcriptase zinc-binding domainPFAMPF13966zf-RVTcoord: 940..1028
e-value: 1.8E-13
score: 51.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 145..175
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 501..527
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 458..537
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 415..435
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 371..400
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 143..175
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 458..484
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 371..385
NoneNo IPR availablePANTHERPTHR33710BNAC02G09200D PROTEINcoord: 683..926
NoneNo IPR availablePANTHERPTHR33710:SF32SUBFAMILY NOT NAMEDcoord: 683..926

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg038760.1Spg038760.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003824 catalytic activity