Spg038744 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg038744
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	lys-63-specific deubiquitinase BRCC36-like
Location	scaffold12: 7445617 .. 7451474 (-)
RNA-Seq Expression	Spg038744
Synteny	Spg038744

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGATCGGTATCAACGGTACGCTCAACCGTACTGTATTGCTGCTCGAGGAGCCTTGCGATCCCCTGCTCTGCACAAGGTCCTTCGAAACACCGGCCAGTGAGTCTCGCTTCAGAGTTGAAAGCTCGAAGATCCTTTCGAATCTCTCTCTTTCTTTCTCCCTTTTCCTTCATTCCTTTTCTGCACAGAGAATCGAAGTTTCCGAATTCGGAGAAAAAAACGGCGATCCAAAGATGTCTCTGACGGGCGTGAAGATGTCCGAAGACGTTTGGTTTACTTGTCTCACTCATGCATTGTCCACCGAGACTGAGGAAATCATGGGGCTTCTTCTTGGCGATATCGAGGTCACTCTCTAGATTTCCACTCTGCAATTTGCTACCCCTCCTCTTTTAAGGGTTTTTTTTTTCGAGTTTGTTTCAGCTCATTCTCGCCCATTTTGCGTAATCTGCTGTGGGTTTTGCTTTAATTTTGGTTATTGCGGGTGTATTCTTTGGCTTGGTTGCTTGTAAATGTATTGGATGTCTGTTTGGAAGAAGGGTTAATTTGGTTGTTTTCGGTTGTTTTGGGAAATGGGGTTGTTTTTGGTTTGGATTCTCTTTATTCTAGAGGTATGAGTTTTGTGCTCCCTTGGCTTGGTTAGTTGGTTCCTTGGTCATTTTGTAAAATCTACAGGGAGGAGTGGTGTTTATGGTACTCTGTAGAATCTTTGACTCCAAATGATGTCTGTTAGAATTTAGAAATGGACTTGGTTTTTTTTTCCACAAGAGTTCGTCTGAGTTTGTTACATTAAGCACTGTTCTGATCCTCTGTTATAGCTCTTGTTAGATGGTCTATCAGAGTTATGGTCAATTGGTTCATGGCATAGAATAGAGGATGTTACTTTTAAAATTTATCTCTAGAGTTTTGAGTAGTTGTTTTCATGGCTGATTCTCTAAGCTTTAAGCTCTTTCATGCCCTTTCCATTGGGTGCAGCTATGTGTTCTGTTCTCACAATGAAATTTTGCAGCATTCAAAAAATGGTAGTGTAACTGCACTAATTTGGGGAGCATCGCCTCAGACACGGTCTGACAGAAGGAAGGACCGTGTGGAGACTCATCCTGAACAATTGGCTGCTGCATCTGCCCAGGCTGAGATATCCTTTGCTTCTTTTATCATTATGAAATTCTTGTAGACATTGACCTATTCATCTCATTCATGCTGATTCATCCTCTGTAATGCATCTTTTTCTACTTTATCATTTAAATCAATTATTGTGAAACTGGTCGACAATCTTGACAAATGAAAGGATTTATCTCAAGAGTGAAAGTTGAAGAGTTAAACTGATTTTAAGTATAGGTGCTAGCTTTGTGAAGTAGTTTAACGTAAAGAGGTTAACTATTCAAATACTGAAGGAATCTTTTGGTTATTTATTTTTTCACTCGTGATTAAATCTATATGAAAGCATTTTCTTTTATTTTATATTGTTATATACTTAATATTATAGAACAGAATGACAACAATGACTGGGAGAACAACAAGAGTTATTGGATGGTACCATTCACATCCTCATATTACAGTGCTTCCTTCGCATGTTGGTTAGTATTGACTTGTCTATGGTGTCCAATTGTGACCCATCTTGCTCTTGAAGTGTAATAACACCAATGATGTTAAAGGCTTTGCACATCAGTGAATTGGTCTTCCATTTTGTTCTCCTTTCTTATGTTTCAGTCAGGAACCAAGTCTCCGTTCCACCAAAATACACTTCTAATGGTGATCAGGGTCAAGTGAAAATCATCCTTGGATTTTTTAGACTTCTAGCCATTTTTTTTTTCCAATGGAAGGCCTTTGTTTCTTATAATTTGTTTCTAACAAAAAACCTTTACACTGAGCTTTCTTTTGGTGTCAGGGTGCTTTGTATATAAAGCTGAAAATTTTCTTTTGAAAAATGTTCGTTCTAATGATTTTATAATAATAAAAAGAATCTGAAAATTCCAGATCTCAGGAAATTTCATCAGTGCAGCCCTTTTTTATCTTAAAAAAGAAAAAAAAAAAAATTAAGGCAGCTCTTTTTCCTCTTCGCATTCCTTGTGAAGACTAAGATTTCTAAGAGTTGGGCTGATTTAGTTAAATATTATTCTGCAAAAGAAAAGTTGTAATGAATATCCTTATATAATATGGGGTGATAACTGACCTTTCATTTCAAAGTGCTGGTCCATCACCCCAGTCTTGCACATTATGTCTATGCTACAATTTTAGTTATGGAGTTTCTTTGATTTATATATTCGAATGTTTTTTTTAATAATTTTTCTTTGCATTTCTCAATTAAAGAAAAGAACACTTCAATCATGTAATCTTACCTTCTGCAGATGTGCGAACGCAAGGGACATATCAGCTCCTTGATTCTGGGTTTATTGGGCTAATATTTTCCTGCTTTAGTGAAGATGCAAACAAGGTTTGAATAATTGTATTTGCTTTGAAGCATTATCTCTTTGCTTGTTTGCTAAACATAGTTTCCTGCTTTAGTGAAGATGCAAACAAGGTTTGAATAATTGTATTTGCTTTGGAGCATTATCTCTTTGCTTGTTTGCTAAACATAGTTGGATAATGTCAGGTTGGAAGAATTCAAGTTATTGCTTTCCAGTCCTCGGATGGGAAACAGAATCACCTCTCAAGACCTATTTCCTTATCTCCTGTATATCGAAATTCAGTGATTGATGTTGAATCTTCTTTGAGTTCCTCTGATAATTTATCAGCAAAAGCGGGCTATGGACCAGGGGAGAGTCCTGAACAAGACACTGGTGATTCAGTGGTTGCTGGAGCTATGAAGGTACAAGTATGGCATATGTGCATTACAAAGACACCTAAATGTGGATGTTGACATTCATATGACCAGCTTAAGTTGAATGATGAGCAGAAGGTTTTGCCGAAGTGTCAATTTTCAGACGTGCATGATGTTTAAGATAGCATTGTTTTTAATTGGGAAACATGTTGACCATTTAGTTATTCTGAAAATTCTTAATTGATTGATACTTGATGAGTTCTGCATTGGTTTAAGTTAGGAAAACTTATGCAGAAAAACAATAGCTTACAACACTTTTGAGGATCAGATTCAGGTACTTTACTAGGTCGACTTCTCCCTTTCTATCTTTTCTTTTGCTCTGACCAGTGGGTAAAGCTGCATATCCTAATATTTTTTGTGGCCCTCTGTAGTCTTACGTCTTGTATCAATCTCTACCATTCATTTTCAGGTCAATTAGGAAAATGGTTGTTGCAAACTTGTTTTGCAAAAACTTCTGTTTTACTCTCTCCGATGAGATGCTGTTGGTAATAGTATAGCCTATGAAGTTCTCTGAATAATATTTAACTCCATGATTGTATACAAACTTCCAAGTATTATGCAGTTGTGTCTGGCAACCATTTGATCCAAGGTTTGAGCTTCAGCATACCCAATTGGTTTATATCTATGTAAAAAGTGGGATGATATAACCATCTAATTTGAAATTTTTAAGCCTAATGTTTCTGTGCCATCACATGGATTAATTGTCTATTGGTTAATTGAAGTCAATTAGCTCAGGATAATCTGTTGGTTACTGTTTGTTATCAAAGGAGATATCTAACCAAGTGCTCCGTGGATTTTATTTAATAATCCTGTTTAGGGAGTTCATTTTTGTTAAAATTTCAAATTGCGGTGCATTGGAATCTCACCCTTGTTGGTGTGTCTGACTTGTTTGACATTGTTTGCAGGGTTCTGGACGATCTTCAGAGTTGGGCTATTTCTTTGCTAATGCTGACACCAACTATCAAGGAAAAGAGAAAATGGGCGGGAGCTATCTTACTAACAATTCGAACAGTGGGATTACTGATATTGATCCAATGGACTTGACTGAAAGTATGCAAGAAGCAATGCACCGTTCAAATATTGAAATGAGGTGCGTATGAAATGCAGATTTCTTGGTGTTATCCTCACTTGTCATACAGTTATCTAAAGAATGGCTTTATCTTGTAATTGGTTTAAACTGCGCTGCTTAGAGTGTGCTTTGAATTACTTTTGAAAAAAATGCTTTGTGAATAAACTTACTTTTTCTATGAGCACCTTTGTTAAAATTAGTAATTTAAAGTGTGTTTAATATAGCTTTTGGAGTGATTTTAGATAACCAAAAGTGTTCTAAAAAAATCTTAATAAAAAGCATTTTAGAAAAATTGGATTAATTTAAAAACTCTTTTTGAATGTAGTACAACCAAAAAAATGTGTTATTTAAAGTACTATAAAAATGTAAGATATAAAAATATTTTAAGAAAAAGTGCCTAAAGAACTAGATGGTAAACCAAACACCCCCTCAGTTAACTTGTATAGCTGCATTAATAGGGACTAGGGAGTCAGATGTGGCAGTATCTTGTTATTTTATTCTTCGCTTTCAGTTCATTATTGTAATTTTTTTTCTCTAGCTGGCAGACTTGGGCTTTTCTACTCCTGATTGTGAATTCGTTTTCTTTTGCTGCCAGTGCTGCTGAATTCTCGAGGAAAGAGATTCCTCTTCATGTTATGCCGACTGCATCCCTCATAAAGCTTGATTCACCGTTGATGTCTTTTACAGATTTACAGCATGTTCTGTTCGAAGAGGAGAGATCAGCTTATAGCCTAGCCATCTTGAATAATATGAAGTAATAAAATGATCAACTCTTCCATGAATCATTCGAGCACATTTTCCTCATTTACAAATGGTTTCATAATCCATTTGTTATTGATTCTGATCATCACTTTTGTTTCTCGTAGGGATGGGAAAGTGCATCCAATGACGTTCATACATCACACATCAACATATCAGGCTTCAATGTGCAAGTTAATTGAATATTGGTGAGGCTCACATGTGCCTTCTATCAACCATTTATTTGTGGTATTTTGTTCTCCATGTGCCTAAATTCACATTTGATTGTAATTGCTCTCATTTCCCTTTTGATTGGTTGCAGTCTTAGTCCTGCCATAAGTGCGCTTCAGGACCGCGTAAAAGAAAATGAAATTCGGGTACGAATTGATTCCAAACACTCCCATTTGCATAGATTGATCCCACTGATTTTCTAATTGGACTTGAAAGGACATTTTCTGCACATAATTTGTTGATCCCTTTGCTCTGATGAATTCAAATCATTACTTCATTATTTGGCGAAAGAGTGTTAGATAGTTCCAATATGATTTTAGAGGTTGATGGCTTCTCTGTAAAACAGTTAGCTTTGCTGGCTGAGGAAGCCAGGAATCTGGAAGTTGAGGCTGCGAAAGCGAACGAGTCAGTTCCTGGATCACCTCACCAAGTTTCTCATGGGTCTCGAGCAAGTGCGTCGCCAACACACAGGGACTTGTATCCTTCAACTGCATCTGTTGGTGCACGAACTGCAGGAAGCTCTATGTACCGGAGTAGAAAGGGGTTGTGATGAATCTTGTGCCGATAACTTGTTTTCCCAATTCCCGAAAGCCTGTATTATAGCGTTCGGGGTTTCTTGTGCATAAAAACGATCCAACGTATAGAAGAGGGATCTAATGGCATTCATTATTAGCTACCAAAATTTCACCTTCTTGATGTTAGATACTGTCTAAAAATGGCTTTTGATCAAGTGGCATGCAGTTGAATCCACTTATATCGGTTTGGAGAAGTTGCAAACTAAGATCAGTCTAGATCTGTATGCTTCTGATGACCAACATGAATTTTCAGCACAAAATGCAAGAATGTAACGAGTTTAAGCAATATTTGTACTCATTTTGTTAAAGATCGAGTATTAGTCTGTGTCTCTGTTTGCTATCATTTCTAGTTTAATCTTTTAACATATTCCATTAGCAAGCTCCAAGATCTCTCTCTGTCTTAAGCAAATATCAAACGTTTGTGAAGTC

mRNA sequence

ATGAAAGCATTTTCTTTTATTTTATATTGTTATATACTTAATATTATAGAACAGAATGACAACAATGACTGGGAGAACAACAAGAGTTATTGGATGGTACCATTCACATCCTCATATTACAGTGCTTCCTTCGCATGTTGGAACCAAGTCTCCGTTCCACCAAAATACACTTCTAATGATGTGCGAACGCAAGGGACATATCAGCTCCTTGATTCTGGGTTTATTGGGCTAATATTTTCCTGCTTTAGTGAAGATGCAAACAAGGTTGGAAGAATTCAAGTTATTGCTTTCCAGTCCTCGGATGGGAAACAGAATCACCTCTCAAGACCTATTTCCTTATCTCCTGTATATCGAAATTCAGTGATTGATGTTGAATCTTCTTTGAGTTCCTCTGATAATTTATCAGCAAAAGCGGGCTATGGACCAGGGGAGAGTCCTGAACAAGACACTGGTGATTCAGTGGTTGCTGGAGCTATGAAGGAAAACTTATGCAGAAAAACAATAGCTTACAACACTTTTGAGGATCAGATTCAGGGTTCTGGACGATCTTCAGAGTTGGGCTATTTCTTTGCTAATGCTGACACCAACTATCAAGGAAAAGAGAAAATGGGCGGGAGCTATCTTACTAACAATTCGAACAGTGGGATTACTGATATTGATCCAATGGACTTGACTGAAAGTATGCAAGAAGCAATGCACCGTTCAAATATTGAAATGAGCTGGCAGACTTGGGCTTTTCTACTCCTGATTGTGAATTCGTTTTCTTTTGCTGCCAGTGCTGCTGAATTCTCGAGGAAAGAGATTCCTCTTCATGTTATGCCGACTGCATCCCTCATAAAGCTTGATTCACCGTTGATGTCTTTTACAGATTTACAGCATGTTCTGTTCGAAGAGGAGAGATCAGCTTATAGCCTAGCCATCTTGAATAATATGAAGGATGGGAAAGTGCATCCAATGACGTTCATACATCACACATCAACATATCAGGCTTCAATGTGCAAGTTAATTGAATATTGTCTTAGTCCTGCCATAAGTGCGCTTCAGGACCGCGTAAAAGAAAATGAAATTCGGTTAGCTTTGCTGGCTGAGGAAGCCAGGAATCTGGAAGTTGAGGCTGCGAAAGCGAACGAGTCAGTTCCTGGATCACCTCACCAAGTTTCTCATGGGTCTCGAGCAAGTGCGTCGCCAACACACAGGGACTTGTATCCTTCAACTGCATCTGTTGGTGCACGAACTGCAGGAAGCTCTATGTACCGGAGTAGAAAGGGGTTGTGA

Coding sequence (CDS)

ATGAAAGCATTTTCTTTTATTTTATATTGTTATATACTTAATATTATAGAACAGAATGACAACAATGACTGGGAGAACAACAAGAGTTATTGGATGGTACCATTCACATCCTCATATTACAGTGCTTCCTTCGCATGTTGGAACCAAGTCTCCGTTCCACCAAAATACACTTCTAATGATGTGCGAACGCAAGGGACATATCAGCTCCTTGATTCTGGGTTTATTGGGCTAATATTTTCCTGCTTTAGTGAAGATGCAAACAAGGTTGGAAGAATTCAAGTTATTGCTTTCCAGTCCTCGGATGGGAAACAGAATCACCTCTCAAGACCTATTTCCTTATCTCCTGTATATCGAAATTCAGTGATTGATGTTGAATCTTCTTTGAGTTCCTCTGATAATTTATCAGCAAAAGCGGGCTATGGACCAGGGGAGAGTCCTGAACAAGACACTGGTGATTCAGTGGTTGCTGGAGCTATGAAGGAAAACTTATGCAGAAAAACAATAGCTTACAACACTTTTGAGGATCAGATTCAGGGTTCTGGACGATCTTCAGAGTTGGGCTATTTCTTTGCTAATGCTGACACCAACTATCAAGGAAAAGAGAAAATGGGCGGGAGCTATCTTACTAACAATTCGAACAGTGGGATTACTGATATTGATCCAATGGACTTGACTGAAAGTATGCAAGAAGCAATGCACCGTTCAAATATTGAAATGAGCTGGCAGACTTGGGCTTTTCTACTCCTGATTGTGAATTCGTTTTCTTTTGCTGCCAGTGCTGCTGAATTCTCGAGGAAAGAGATTCCTCTTCATGTTATGCCGACTGCATCCCTCATAAAGCTTGATTCACCGTTGATGTCTTTTACAGATTTACAGCATGTTCTGTTCGAAGAGGAGAGATCAGCTTATAGCCTAGCCATCTTGAATAATATGAAGGATGGGAAAGTGCATCCAATGACGTTCATACATCACACATCAACATATCAGGCTTCAATGTGCAAGTTAATTGAATATTGTCTTAGTCCTGCCATAAGTGCGCTTCAGGACCGCGTAAAAGAAAATGAAATTCGGTTAGCTTTGCTGGCTGAGGAAGCCAGGAATCTGGAAGTTGAGGCTGCGAAAGCGAACGAGTCAGTTCCTGGATCACCTCACCAAGTTTCTCATGGGTCTCGAGCAAGTGCGTCGCCAACACACAGGGACTTGTATCCTTCAACTGCATCTGTTGGTGCACGAACTGCAGGAAGCTCTATGTACCGGAGTAGAAAGGGGTTGTGA

Protein sequence

MKAFSFILYCYILNIIEQNDNNDWENNKSYWMVPFTSSYYSASFACWNQVSVPPKYTSNDVRTQGTYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSRPISLSPVYRNSVIDVESSLSSSDNLSAKAGYGPGESPEQDTGDSVVAGAMKENLCRKTIAYNTFEDQIQGSGRSSELGYFFANADTNYQGKEKMGGSYLTNNSNSGITDIDPMDLTESMQEAMHRSNIEMSWQTWAFLLLIVNSFSFAASAAEFSRKEIPLHVMPTASLIKLDSPLMSFTDLQHVLFEEERSAYSLAILNNMKDGKVHPMTFIHHTSTYQASMCKLIEYCLSPAISALQDRVKENEIRLALLAEEARNLEVEAAKANESVPGSPHQVSHGSRASASPTHRDLYPSTASVGARTAGSSMYRSRKGL

Homology

[Close]

BLAST of Spg038744 vs. NCBI nr
Match: XP_004152213.1 (lys-63-specific deubiquitinase BRCC36 isoform X1 [Cucumis sativus] >KGN52872.1 hypothetical protein Csa_015166 [Cucumis sativus])

HSP 1 Score: 579.3 bits (1492), Expect = 2.7e-161
Identity = 309/375 (82.40%), Postives = 325/375 (86.67%), Query Frame = 0


Query: 50  VSVPPKYTSNDVRTQGTYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSR 109
           ++V P +   DVRTQGTYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSR
Sbjct: 101 ITVLPSHV--DVRTQGTYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSR 160

Query: 110 PISLSPVYRNSVIDVESSLSSSDNLSAKAGYGPGESPEQDTGDSVVAGAMKENLCRKTIA 169
           PISLSPVYRNSVIDVESSLSSSDN+S   GYGPGE+PEQDTGDS++AGA+K         
Sbjct: 161 PISLSPVYRNSVIDVESSLSSSDNVSGNVGYGPGENPEQDTGDSMIAGALK--------- 220

Query: 170 YNTFEDQIQGSGRSSELGYFFANADTNYQGKEKMGGSYLTNNSNSGITDIDPMDLTESMQ 229
                    G+GRSSELGYFFANADTNYQGKEK+GGSYL NN+NSGITDIDPMDL+ESMQ
Sbjct: 221 ---------GTGRSSELGYFFANADTNYQGKEKIGGSYLINNTNSGITDIDPMDLSESMQ 280

Query: 230 EAMHRSNIEMSWQTWAFLLLIVNSFSFAASAAEFSRKEIPLHVMPTASLIKLDSPLMSFT 289
           EAMHRSNIEM                   SAAEFSRKEIPLHVMPTASLIKLDSPL SFT
Sbjct: 281 EAMHRSNIEM-------------------SAAEFSRKEIPLHVMPTASLIKLDSPLTSFT 340

Query: 290 DLQHVLFEEERSAYSLAILNNMKDGKVHPMTFIHHTSTYQASMCKLIEYCLSPAISALQD 349
           DLQHVLFEEERSAY+ AI NNMKDGKVHP+TFIHHTSTYQASMCKLIEYCLSPAISALQD
Sbjct: 341 DLQHVLFEEERSAYNQAISNNMKDGKVHPLTFIHHTSTYQASMCKLIEYCLSPAISALQD 400

Query: 350 RVKENEIRLALLAEEARNLEVEAAKANESVPGSPHQVSHGSRASASPTHRDLYPSTASVG 409
           RVKENEIRLALLAEEARNLEVEAAKANESVPGSPHQV+HGSRASASPTHRDLYPSTASVG
Sbjct: 401 RVKENEIRLALLAEEARNLEVEAAKANESVPGSPHQVTHGSRASASPTHRDLYPSTASVG 436

Query: 410 ARTAGSSMYRSRKGL 425
           AR+ GSSMYRSRKGL
Sbjct: 461 ARSGGSSMYRSRKGL 436

[Close]

BLAST of Spg038744 vs. NCBI nr
Match: XP_031740561.1 (lys-63-specific deubiquitinase BRCC36 isoform X2 [Cucumis sativus])

HSP 1 Score: 579.3 bits (1492), Expect = 2.7e-161
Identity = 309/375 (82.40%), Postives = 325/375 (86.67%), Query Frame = 0


Query: 50  VSVPPKYTSNDVRTQGTYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSR 109
           ++V P +   DVRTQGTYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSR
Sbjct: 21  ITVLPSHV--DVRTQGTYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSR 80

Query: 110 PISLSPVYRNSVIDVESSLSSSDNLSAKAGYGPGESPEQDTGDSVVAGAMKENLCRKTIA 169
           PISLSPVYRNSVIDVESSLSSSDN+S   GYGPGE+PEQDTGDS++AGA+K         
Sbjct: 81  PISLSPVYRNSVIDVESSLSSSDNVSGNVGYGPGENPEQDTGDSMIAGALK--------- 140

Query: 170 YNTFEDQIQGSGRSSELGYFFANADTNYQGKEKMGGSYLTNNSNSGITDIDPMDLTESMQ 229
                    G+GRSSELGYFFANADTNYQGKEK+GGSYL NN+NSGITDIDPMDL+ESMQ
Sbjct: 141 ---------GTGRSSELGYFFANADTNYQGKEKIGGSYLINNTNSGITDIDPMDLSESMQ 200

Query: 230 EAMHRSNIEMSWQTWAFLLLIVNSFSFAASAAEFSRKEIPLHVMPTASLIKLDSPLMSFT 289
           EAMHRSNIEM                   SAAEFSRKEIPLHVMPTASLIKLDSPL SFT
Sbjct: 201 EAMHRSNIEM-------------------SAAEFSRKEIPLHVMPTASLIKLDSPLTSFT 260

Query: 290 DLQHVLFEEERSAYSLAILNNMKDGKVHPMTFIHHTSTYQASMCKLIEYCLSPAISALQD 349
           DLQHVLFEEERSAY+ AI NNMKDGKVHP+TFIHHTSTYQASMCKLIEYCLSPAISALQD
Sbjct: 261 DLQHVLFEEERSAYNQAISNNMKDGKVHPLTFIHHTSTYQASMCKLIEYCLSPAISALQD 320

Query: 350 RVKENEIRLALLAEEARNLEVEAAKANESVPGSPHQVSHGSRASASPTHRDLYPSTASVG 409
           RVKENEIRLALLAEEARNLEVEAAKANESVPGSPHQV+HGSRASASPTHRDLYPSTASVG
Sbjct: 321 RVKENEIRLALLAEEARNLEVEAAKANESVPGSPHQVTHGSRASASPTHRDLYPSTASVG 356

Query: 410 ARTAGSSMYRSRKGL 425
           AR+ GSSMYRSRKGL
Sbjct: 381 ARSGGSSMYRSRKGL 356

[Close]

BLAST of Spg038744 vs. NCBI nr
Match: XP_008454260.1 (PREDICTED: lys-63-specific deubiquitinase BRCC36 isoform X1 [Cucumis melo])

HSP 1 Score: 577.0 bits (1486), Expect = 1.3e-160
Identity = 308/375 (82.13%), Postives = 324/375 (86.40%), Query Frame = 0


Query: 50  VSVPPKYTSNDVRTQGTYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSR 109
           ++V P +   DVRTQGTYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSR
Sbjct: 101 ITVLPSHV--DVRTQGTYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSR 160

Query: 110 PISLSPVYRNSVIDVESSLSSSDNLSAKAGYGPGESPEQDTGDSVVAGAMKENLCRKTIA 169
           PISLSPVYRNSVIDVESSLSSSDN+S   GYGPGE+PEQDTGDS++AGA+K         
Sbjct: 161 PISLSPVYRNSVIDVESSLSSSDNVSGNVGYGPGENPEQDTGDSMIAGALK--------- 220

Query: 170 YNTFEDQIQGSGRSSELGYFFANADTNYQGKEKMGGSYLTNNSNSGITDIDPMDLTESMQ 229
                    G+GRSSELGYFFANADTNYQGKEK+GGSY  NN+NSGITDIDPMDL+ESMQ
Sbjct: 221 ---------GTGRSSELGYFFANADTNYQGKEKIGGSYRINNTNSGITDIDPMDLSESMQ 280

Query: 230 EAMHRSNIEMSWQTWAFLLLIVNSFSFAASAAEFSRKEIPLHVMPTASLIKLDSPLMSFT 289
           EAMHRSNIEM                   SAAEFSRKEIPLHVMPTASLIKLDSPL SFT
Sbjct: 281 EAMHRSNIEM-------------------SAAEFSRKEIPLHVMPTASLIKLDSPLTSFT 340

Query: 290 DLQHVLFEEERSAYSLAILNNMKDGKVHPMTFIHHTSTYQASMCKLIEYCLSPAISALQD 349
           DLQHVLFEEERSAY+ AI NNMKDGKVHP+TFIHHTSTYQASMCKLIEYCLSPAISALQD
Sbjct: 341 DLQHVLFEEERSAYNQAISNNMKDGKVHPLTFIHHTSTYQASMCKLIEYCLSPAISALQD 400

Query: 350 RVKENEIRLALLAEEARNLEVEAAKANESVPGSPHQVSHGSRASASPTHRDLYPSTASVG 409
           RVKENEIRLALLAEEARNLEVEAAKANESVPGSPHQV+HGSRASASPTHRDLYPSTASVG
Sbjct: 401 RVKENEIRLALLAEEARNLEVEAAKANESVPGSPHQVTHGSRASASPTHRDLYPSTASVG 436

Query: 410 ARTAGSSMYRSRKGL 425
           AR+ GSSMYRSRKGL
Sbjct: 461 ARSGGSSMYRSRKGL 436

[Close]

BLAST of Spg038744 vs. NCBI nr
Match: KAA0044426.1 (lys-63-specific deubiquitinase BRCC36 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 577.0 bits (1486), Expect = 1.3e-160
Identity = 308/375 (82.13%), Postives = 324/375 (86.40%), Query Frame = 0


Query: 50  VSVPPKYTSNDVRTQGTYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSR 109
           ++V P +   DVRTQGTYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSR
Sbjct: 196 ITVLPSHV--DVRTQGTYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSR 255

Query: 110 PISLSPVYRNSVIDVESSLSSSDNLSAKAGYGPGESPEQDTGDSVVAGAMKENLCRKTIA 169
           PISLSPVYRNSVIDVESSLSSSDN+S   GYGPGE+PEQDTGDS++AGA+K         
Sbjct: 256 PISLSPVYRNSVIDVESSLSSSDNVSGNVGYGPGENPEQDTGDSMIAGALK--------- 315

Query: 170 YNTFEDQIQGSGRSSELGYFFANADTNYQGKEKMGGSYLTNNSNSGITDIDPMDLTESMQ 229
                    G+GRSSELGYFFANADTNYQGKEK+GGSY  NN+NSGITDIDPMDL+ESMQ
Sbjct: 316 ---------GTGRSSELGYFFANADTNYQGKEKIGGSYRINNTNSGITDIDPMDLSESMQ 375

Query: 230 EAMHRSNIEMSWQTWAFLLLIVNSFSFAASAAEFSRKEIPLHVMPTASLIKLDSPLMSFT 289
           EAMHRSNIEM                   SAAEFSRKEIPLHVMPTASLIKLDSPL SFT
Sbjct: 376 EAMHRSNIEM-------------------SAAEFSRKEIPLHVMPTASLIKLDSPLTSFT 435

Query: 290 DLQHVLFEEERSAYSLAILNNMKDGKVHPMTFIHHTSTYQASMCKLIEYCLSPAISALQD 349
           DLQHVLFEEERSAY+ AI NNMKDGKVHP+TFIHHTSTYQASMCKLIEYCLSPAISALQD
Sbjct: 436 DLQHVLFEEERSAYNQAISNNMKDGKVHPLTFIHHTSTYQASMCKLIEYCLSPAISALQD 495

Query: 350 RVKENEIRLALLAEEARNLEVEAAKANESVPGSPHQVSHGSRASASPTHRDLYPSTASVG 409
           RVKENEIRLALLAEEARNLEVEAAKANESVPGSPHQV+HGSRASASPTHRDLYPSTASVG
Sbjct: 496 RVKENEIRLALLAEEARNLEVEAAKANESVPGSPHQVTHGSRASASPTHRDLYPSTASVG 531

Query: 410 ARTAGSSMYRSRKGL 425
           AR+ GSSMYRSRKGL
Sbjct: 556 ARSGGSSMYRSRKGL 531

[Close]

BLAST of Spg038744 vs. NCBI nr
Match: XP_008454262.1 (PREDICTED: lys-63-specific deubiquitinase BRCC36 isoform X2 [Cucumis melo] >TYK29554.1 lys-63-specific deubiquitinase BRCC36 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 577.0 bits (1486), Expect = 1.3e-160
Identity = 308/375 (82.13%), Postives = 324/375 (86.40%), Query Frame = 0


Query: 50  VSVPPKYTSNDVRTQGTYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSR 109
           ++V P +   DVRTQGTYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSR
Sbjct: 21  ITVLPSHV--DVRTQGTYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSR 80

Query: 110 PISLSPVYRNSVIDVESSLSSSDNLSAKAGYGPGESPEQDTGDSVVAGAMKENLCRKTIA 169
           PISLSPVYRNSVIDVESSLSSSDN+S   GYGPGE+PEQDTGDS++AGA+K         
Sbjct: 81  PISLSPVYRNSVIDVESSLSSSDNVSGNVGYGPGENPEQDTGDSMIAGALK--------- 140

Query: 170 YNTFEDQIQGSGRSSELGYFFANADTNYQGKEKMGGSYLTNNSNSGITDIDPMDLTESMQ 229
                    G+GRSSELGYFFANADTNYQGKEK+GGSY  NN+NSGITDIDPMDL+ESMQ
Sbjct: 141 ---------GTGRSSELGYFFANADTNYQGKEKIGGSYRINNTNSGITDIDPMDLSESMQ 200

Query: 230 EAMHRSNIEMSWQTWAFLLLIVNSFSFAASAAEFSRKEIPLHVMPTASLIKLDSPLMSFT 289
           EAMHRSNIEM                   SAAEFSRKEIPLHVMPTASLIKLDSPL SFT
Sbjct: 201 EAMHRSNIEM-------------------SAAEFSRKEIPLHVMPTASLIKLDSPLTSFT 260

Query: 290 DLQHVLFEEERSAYSLAILNNMKDGKVHPMTFIHHTSTYQASMCKLIEYCLSPAISALQD 349
           DLQHVLFEEERSAY+ AI NNMKDGKVHP+TFIHHTSTYQASMCKLIEYCLSPAISALQD
Sbjct: 261 DLQHVLFEEERSAYNQAISNNMKDGKVHPLTFIHHTSTYQASMCKLIEYCLSPAISALQD 320

Query: 350 RVKENEIRLALLAEEARNLEVEAAKANESVPGSPHQVSHGSRASASPTHRDLYPSTASVG 409
           RVKENEIRLALLAEEARNLEVEAAKANESVPGSPHQV+HGSRASASPTHRDLYPSTASVG
Sbjct: 321 RVKENEIRLALLAEEARNLEVEAAKANESVPGSPHQVTHGSRASASPTHRDLYPSTASVG 356

Query: 410 ARTAGSSMYRSRKGL 425
           AR+ GSSMYRSRKGL
Sbjct: 381 ARSGGSSMYRSRKGL 356

[Close]

BLAST of Spg038744 vs. ExPASy Swiss-Prot
Match: Q5R9L6 (Lys-63-specific deubiquitinase BRCC36 OS=Pongo abelii OX=9601 GN=BRCC3 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 1.2e-07
Identity = 31/64 (48.44%), Postives = 41/64 (64.06%), Query Frame = 0


Query: 60  DVRTQGTYQLLDSGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDG-KQNHLSRPISLSPVY 119
           DVRTQ  YQ++D GF+GLIFSCF ED N K GR+    FQS    K + L+   S++ ++
Sbjct: 135 DVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSDLTHLDSVTKIH 194

Query: 120 RNSV 122
             SV
Sbjct: 195 NGSV 198

[Close]

BLAST of Spg038744 vs. ExPASy Swiss-Prot
Match: P46737 (Lys-63-specific deubiquitinase BRCC36 OS=Mus musculus OX=10090 GN=Brcc3 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 3.5e-07
Identity = 31/74 (41.89%), Postives = 44/74 (59.46%), Query Frame = 0


Query: 60  DVRTQGTYQLLDSGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN----HLSRPISLS 119
           DVRTQ  YQ++D GF+GLIFSCF ED N K GR+    FQS   +++     +  PI + 
Sbjct: 135 DVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSEYERIEIPIHIV 194

Query: 120 PVYRNSVIDVESSL 129
           P      + +ES++
Sbjct: 195 PHITIGKVCLESAV 208

[Close]

BLAST of Spg038744 vs. ExPASy Swiss-Prot
Match: B2RYM5 (Lys-63-specific deubiquitinase BRCC36 OS=Rattus norvegicus OX=10116 GN=Brcc3 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 6.0e-07
Identity = 30/74 (40.54%), Postives = 44/74 (59.46%), Query Frame = 0


Query: 60  DVRTQGTYQLLDSGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN----HLSRPISLS 119
           DVRTQ  YQ++D GF+GLIFSCF ED N K GR+    FQS   +++     +  P+ + 
Sbjct: 135 DVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSVQAQKSSDYERIEIPVHVV 194

Query: 120 PVYRNSVIDVESSL 129
           P      + +ES++
Sbjct: 195 PHVTIGKVCLESAV 208

[Close]

BLAST of Spg038744 vs. ExPASy Swiss-Prot
Match: A5PJP6 (Lys-63-specific deubiquitinase BRCC36 OS=Bos taurus OX=9913 GN=BRCC3 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 7.9e-07
Identity = 26/47 (55.32%), Postives = 33/47 (70.21%), Query Frame = 0


Query: 60  DVRTQGTYQLLDSGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN 106
           DVRTQ  YQ++D GF+GLIFSCF ED N K GR+    FQS   +++
Sbjct: 135 DVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKS 181

[Close]

BLAST of Spg038744 vs. ExPASy Swiss-Prot
Match: B0KWU8 (Lys-63-specific deubiquitinase BRCC36 OS=Callithrix jacchus OX=9483 GN=BRCC3 PE=3 SV=2)

HSP 1 Score: 56.6 bits (135), Expect = 7.9e-07
Identity = 26/47 (55.32%), Postives = 33/47 (70.21%), Query Frame = 0


Query: 60  DVRTQGTYQLLDSGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN 106
           DVRTQ  YQ++D GF+GLIFSCF ED N K GR+    FQS   +++
Sbjct: 135 DVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKS 181

[Close]

BLAST of Spg038744 vs. ExPASy TrEMBL
Match: A0A0A0KWR1 (MPN domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G004830 PE=3 SV=1)

HSP 1 Score: 579.3 bits (1492), Expect = 1.3e-161
Identity = 309/375 (82.40%), Postives = 325/375 (86.67%), Query Frame = 0


Query: 50  VSVPPKYTSNDVRTQGTYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSR 109
           ++V P +   DVRTQGTYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSR
Sbjct: 101 ITVLPSHV--DVRTQGTYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSR 160

Query: 110 PISLSPVYRNSVIDVESSLSSSDNLSAKAGYGPGESPEQDTGDSVVAGAMKENLCRKTIA 169
           PISLSPVYRNSVIDVESSLSSSDN+S   GYGPGE+PEQDTGDS++AGA+K         
Sbjct: 161 PISLSPVYRNSVIDVESSLSSSDNVSGNVGYGPGENPEQDTGDSMIAGALK--------- 220

Query: 170 YNTFEDQIQGSGRSSELGYFFANADTNYQGKEKMGGSYLTNNSNSGITDIDPMDLTESMQ 229
                    G+GRSSELGYFFANADTNYQGKEK+GGSYL NN+NSGITDIDPMDL+ESMQ
Sbjct: 221 ---------GTGRSSELGYFFANADTNYQGKEKIGGSYLINNTNSGITDIDPMDLSESMQ 280

Query: 230 EAMHRSNIEMSWQTWAFLLLIVNSFSFAASAAEFSRKEIPLHVMPTASLIKLDSPLMSFT 289
           EAMHRSNIEM                   SAAEFSRKEIPLHVMPTASLIKLDSPL SFT
Sbjct: 281 EAMHRSNIEM-------------------SAAEFSRKEIPLHVMPTASLIKLDSPLTSFT 340

Query: 290 DLQHVLFEEERSAYSLAILNNMKDGKVHPMTFIHHTSTYQASMCKLIEYCLSPAISALQD 349
           DLQHVLFEEERSAY+ AI NNMKDGKVHP+TFIHHTSTYQASMCKLIEYCLSPAISALQD
Sbjct: 341 DLQHVLFEEERSAYNQAISNNMKDGKVHPLTFIHHTSTYQASMCKLIEYCLSPAISALQD 400

Query: 350 RVKENEIRLALLAEEARNLEVEAAKANESVPGSPHQVSHGSRASASPTHRDLYPSTASVG 409
           RVKENEIRLALLAEEARNLEVEAAKANESVPGSPHQV+HGSRASASPTHRDLYPSTASVG
Sbjct: 401 RVKENEIRLALLAEEARNLEVEAAKANESVPGSPHQVTHGSRASASPTHRDLYPSTASVG 436

Query: 410 ARTAGSSMYRSRKGL 425
           AR+ GSSMYRSRKGL
Sbjct: 461 ARSGGSSMYRSRKGL 436

[Close]

BLAST of Spg038744 vs. ExPASy TrEMBL
Match: A0A5D3E152 (Lys-63-specific deubiquitinase BRCC36 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001600 PE=4 SV=1)

HSP 1 Score: 577.0 bits (1486), Expect = 6.4e-161
Identity = 308/375 (82.13%), Postives = 324/375 (86.40%), Query Frame = 0


Query: 50  VSVPPKYTSNDVRTQGTYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSR 109
           ++V P +   DVRTQGTYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSR
Sbjct: 21  ITVLPSHV--DVRTQGTYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSR 80

Query: 110 PISLSPVYRNSVIDVESSLSSSDNLSAKAGYGPGESPEQDTGDSVVAGAMKENLCRKTIA 169
           PISLSPVYRNSVIDVESSLSSSDN+S   GYGPGE+PEQDTGDS++AGA+K         
Sbjct: 81  PISLSPVYRNSVIDVESSLSSSDNVSGNVGYGPGENPEQDTGDSMIAGALK--------- 140

Query: 170 YNTFEDQIQGSGRSSELGYFFANADTNYQGKEKMGGSYLTNNSNSGITDIDPMDLTESMQ 229
                    G+GRSSELGYFFANADTNYQGKEK+GGSY  NN+NSGITDIDPMDL+ESMQ
Sbjct: 141 ---------GTGRSSELGYFFANADTNYQGKEKIGGSYRINNTNSGITDIDPMDLSESMQ 200

Query: 230 EAMHRSNIEMSWQTWAFLLLIVNSFSFAASAAEFSRKEIPLHVMPTASLIKLDSPLMSFT 289
           EAMHRSNIEM                   SAAEFSRKEIPLHVMPTASLIKLDSPL SFT
Sbjct: 201 EAMHRSNIEM-------------------SAAEFSRKEIPLHVMPTASLIKLDSPLTSFT 260

Query: 290 DLQHVLFEEERSAYSLAILNNMKDGKVHPMTFIHHTSTYQASMCKLIEYCLSPAISALQD 349
           DLQHVLFEEERSAY+ AI NNMKDGKVHP+TFIHHTSTYQASMCKLIEYCLSPAISALQD
Sbjct: 261 DLQHVLFEEERSAYNQAISNNMKDGKVHPLTFIHHTSTYQASMCKLIEYCLSPAISALQD 320

Query: 350 RVKENEIRLALLAEEARNLEVEAAKANESVPGSPHQVSHGSRASASPTHRDLYPSTASVG 409
           RVKENEIRLALLAEEARNLEVEAAKANESVPGSPHQV+HGSRASASPTHRDLYPSTASVG
Sbjct: 321 RVKENEIRLALLAEEARNLEVEAAKANESVPGSPHQVTHGSRASASPTHRDLYPSTASVG 356

Query: 410 ARTAGSSMYRSRKGL 425
           AR+ GSSMYRSRKGL
Sbjct: 381 ARSGGSSMYRSRKGL 356

[Close]

BLAST of Spg038744 vs. ExPASy TrEMBL
Match: A0A5A7TQP2 (Lys-63-specific deubiquitinase BRCC36 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G001580 PE=4 SV=1)

HSP 1 Score: 577.0 bits (1486), Expect = 6.4e-161
Identity = 308/375 (82.13%), Postives = 324/375 (86.40%), Query Frame = 0


Query: 50  VSVPPKYTSNDVRTQGTYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSR 109
           ++V P +   DVRTQGTYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSR
Sbjct: 196 ITVLPSHV--DVRTQGTYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSR 255

Query: 110 PISLSPVYRNSVIDVESSLSSSDNLSAKAGYGPGESPEQDTGDSVVAGAMKENLCRKTIA 169
           PISLSPVYRNSVIDVESSLSSSDN+S   GYGPGE+PEQDTGDS++AGA+K         
Sbjct: 256 PISLSPVYRNSVIDVESSLSSSDNVSGNVGYGPGENPEQDTGDSMIAGALK--------- 315

Query: 170 YNTFEDQIQGSGRSSELGYFFANADTNYQGKEKMGGSYLTNNSNSGITDIDPMDLTESMQ 229
                    G+GRSSELGYFFANADTNYQGKEK+GGSY  NN+NSGITDIDPMDL+ESMQ
Sbjct: 316 ---------GTGRSSELGYFFANADTNYQGKEKIGGSYRINNTNSGITDIDPMDLSESMQ 375

Query: 230 EAMHRSNIEMSWQTWAFLLLIVNSFSFAASAAEFSRKEIPLHVMPTASLIKLDSPLMSFT 289
           EAMHRSNIEM                   SAAEFSRKEIPLHVMPTASLIKLDSPL SFT
Sbjct: 376 EAMHRSNIEM-------------------SAAEFSRKEIPLHVMPTASLIKLDSPLTSFT 435

Query: 290 DLQHVLFEEERSAYSLAILNNMKDGKVHPMTFIHHTSTYQASMCKLIEYCLSPAISALQD 349
           DLQHVLFEEERSAY+ AI NNMKDGKVHP+TFIHHTSTYQASMCKLIEYCLSPAISALQD
Sbjct: 436 DLQHVLFEEERSAYNQAISNNMKDGKVHPLTFIHHTSTYQASMCKLIEYCLSPAISALQD 495

Query: 350 RVKENEIRLALLAEEARNLEVEAAKANESVPGSPHQVSHGSRASASPTHRDLYPSTASVG 409
           RVKENEIRLALLAEEARNLEVEAAKANESVPGSPHQV+HGSRASASPTHRDLYPSTASVG
Sbjct: 496 RVKENEIRLALLAEEARNLEVEAAKANESVPGSPHQVTHGSRASASPTHRDLYPSTASVG 531

Query: 410 ARTAGSSMYRSRKGL 425
           AR+ GSSMYRSRKGL
Sbjct: 556 ARSGGSSMYRSRKGL 531

[Close]

BLAST of Spg038744 vs. ExPASy TrEMBL
Match: A0A1S3BZE9 (lys-63-specific deubiquitinase BRCC36 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494717 PE=4 SV=1)

HSP 1 Score: 577.0 bits (1486), Expect = 6.4e-161
Identity = 308/375 (82.13%), Postives = 324/375 (86.40%), Query Frame = 0


Query: 50  VSVPPKYTSNDVRTQGTYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSR 109
           ++V P +   DVRTQGTYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSR
Sbjct: 21  ITVLPSHV--DVRTQGTYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSR 80

Query: 110 PISLSPVYRNSVIDVESSLSSSDNLSAKAGYGPGESPEQDTGDSVVAGAMKENLCRKTIA 169
           PISLSPVYRNSVIDVESSLSSSDN+S   GYGPGE+PEQDTGDS++AGA+K         
Sbjct: 81  PISLSPVYRNSVIDVESSLSSSDNVSGNVGYGPGENPEQDTGDSMIAGALK--------- 140

Query: 170 YNTFEDQIQGSGRSSELGYFFANADTNYQGKEKMGGSYLTNNSNSGITDIDPMDLTESMQ 229
                    G+GRSSELGYFFANADTNYQGKEK+GGSY  NN+NSGITDIDPMDL+ESMQ
Sbjct: 141 ---------GTGRSSELGYFFANADTNYQGKEKIGGSYRINNTNSGITDIDPMDLSESMQ 200

Query: 230 EAMHRSNIEMSWQTWAFLLLIVNSFSFAASAAEFSRKEIPLHVMPTASLIKLDSPLMSFT 289
           EAMHRSNIEM                   SAAEFSRKEIPLHVMPTASLIKLDSPL SFT
Sbjct: 201 EAMHRSNIEM-------------------SAAEFSRKEIPLHVMPTASLIKLDSPLTSFT 260

Query: 290 DLQHVLFEEERSAYSLAILNNMKDGKVHPMTFIHHTSTYQASMCKLIEYCLSPAISALQD 349
           DLQHVLFEEERSAY+ AI NNMKDGKVHP+TFIHHTSTYQASMCKLIEYCLSPAISALQD
Sbjct: 261 DLQHVLFEEERSAYNQAISNNMKDGKVHPLTFIHHTSTYQASMCKLIEYCLSPAISALQD 320

Query: 350 RVKENEIRLALLAEEARNLEVEAAKANESVPGSPHQVSHGSRASASPTHRDLYPSTASVG 409
           RVKENEIRLALLAEEARNLEVEAAKANESVPGSPHQV+HGSRASASPTHRDLYPSTASVG
Sbjct: 321 RVKENEIRLALLAEEARNLEVEAAKANESVPGSPHQVTHGSRASASPTHRDLYPSTASVG 356

Query: 410 ARTAGSSMYRSRKGL 425
           AR+ GSSMYRSRKGL
Sbjct: 381 ARSGGSSMYRSRKGL 356

[Close]

BLAST of Spg038744 vs. ExPASy TrEMBL
Match: A0A1S3BY68 (lys-63-specific deubiquitinase BRCC36 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494717 PE=3 SV=1)

HSP 1 Score: 577.0 bits (1486), Expect = 6.4e-161
Identity = 308/375 (82.13%), Postives = 324/375 (86.40%), Query Frame = 0


Query: 50  VSVPPKYTSNDVRTQGTYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSR 109
           ++V P +   DVRTQGTYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSR
Sbjct: 101 ITVLPSHV--DVRTQGTYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSR 160

Query: 110 PISLSPVYRNSVIDVESSLSSSDNLSAKAGYGPGESPEQDTGDSVVAGAMKENLCRKTIA 169
           PISLSPVYRNSVIDVESSLSSSDN+S   GYGPGE+PEQDTGDS++AGA+K         
Sbjct: 161 PISLSPVYRNSVIDVESSLSSSDNVSGNVGYGPGENPEQDTGDSMIAGALK--------- 220

Query: 170 YNTFEDQIQGSGRSSELGYFFANADTNYQGKEKMGGSYLTNNSNSGITDIDPMDLTESMQ 229
                    G+GRSSELGYFFANADTNYQGKEK+GGSY  NN+NSGITDIDPMDL+ESMQ
Sbjct: 221 ---------GTGRSSELGYFFANADTNYQGKEKIGGSYRINNTNSGITDIDPMDLSESMQ 280

Query: 230 EAMHRSNIEMSWQTWAFLLLIVNSFSFAASAAEFSRKEIPLHVMPTASLIKLDSPLMSFT 289
           EAMHRSNIEM                   SAAEFSRKEIPLHVMPTASLIKLDSPL SFT
Sbjct: 281 EAMHRSNIEM-------------------SAAEFSRKEIPLHVMPTASLIKLDSPLTSFT 340

Query: 290 DLQHVLFEEERSAYSLAILNNMKDGKVHPMTFIHHTSTYQASMCKLIEYCLSPAISALQD 349
           DLQHVLFEEERSAY+ AI NNMKDGKVHP+TFIHHTSTYQASMCKLIEYCLSPAISALQD
Sbjct: 341 DLQHVLFEEERSAYNQAISNNMKDGKVHPLTFIHHTSTYQASMCKLIEYCLSPAISALQD 400

Query: 350 RVKENEIRLALLAEEARNLEVEAAKANESVPGSPHQVSHGSRASASPTHRDLYPSTASVG 409
           RVKENEIRLALLAEEARNLEVEAAKANESVPGSPHQV+HGSRASASPTHRDLYPSTASVG
Sbjct: 401 RVKENEIRLALLAEEARNLEVEAAKANESVPGSPHQVTHGSRASASPTHRDLYPSTASVG 436

Query: 410 ARTAGSSMYRSRKGL 425
           AR+ GSSMYRSRKGL
Sbjct: 461 ARSGGSSMYRSRKGL 436

[Close]

BLAST of Spg038744 vs. TAIR 10
Match: AT1G80210.1 (Mov34/MPN/PAD-1 family protein )

HSP 1 Score: 297.0 bits (759), Expect = 2.5e-80
Identity = 172/342 (50.29%), Postives = 222/342 (64.91%), Query Frame = 0


Query: 50  VSVPPKYTSNDVRTQGTYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSR 109
           ++V P +   DVRTQ  YQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGK N + +
Sbjct: 102 ITVLPSHV--DVRTQAMYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKPNSIPK 161

Query: 110 PISLSPVYRNSVIDVESSLSSSDNLSAKAGYGPGESPEQDTGDSVVAGAMKENLCRKTIA 169
            +SL    ++SVID+ESS SSSD++  ++    G++PE DT D+      K         
Sbjct: 162 SMSLVLANKDSVIDLESSFSSSDSIYQRSSSARGDNPELDTSDTATTSGSK--------- 221

Query: 170 YNTFEDQIQGSGRSSELGYFFA-NADTNYQGKEKMGGSYLTNNSNSGITDIDPMDLTESM 229
                    G GR S+   FF  N + N   ++   G+Y     +S   +ID MD++ESM
Sbjct: 222 ---------GGGRVSDFEAFFVNNTEANNTRRDGTSGNY-----SSTAIEIDSMDMSESM 281

Query: 230 QEAMHRSNIEMSWQTWAFLLLIVNSFSFAASAAEFSRKEIPLHVMPTASLIKLDSPLMSF 289
           QEAMHRSN+E                    S   + RKE+PLHV+PT+SL++L+SPL SF
Sbjct: 282 QEAMHRSNLE-------------------TSGVGYVRKEVPLHVLPTSSLLQLNSPLASF 341

Query: 290 TDLQHVLFEEERSAYSLAILNNMKDGKVHPMTFIHHTSTYQASMCKLIEYCLSPAISALQ 349
             LQ VL+EEER+AY  ++  + +DG+VHP+ FIH+TSTYQASMCKLIEYCLSPAI+ALQ
Sbjct: 342 KSLQRVLYEEERAAYHQSVQQSKRDGRVHPLAFIHNTSTYQASMCKLIEYCLSPAINALQ 398

Query: 350 DRVKENEIRLALLAEEARNLEVEAAKANESVPGSPHQVSHGS 391
           DR+KEN+IRLA+L +EA  LE +  K  E+  G+   V HGS
Sbjct: 402 DRLKENKIRLAMLMDEAEVLEAQKLKGAETSGGASRLV-HGS 398

[Close]

BLAST of Spg038744 vs. TAIR 10
Match: AT3G06820.1 (Mov34/MPN/PAD-1 family protein )

HSP 1 Score: 287.7 bits (735), Expect = 1.5e-77
Identity = 172/342 (50.29%), Postives = 220/342 (64.33%), Query Frame = 0


Query: 50  VSVPPKYTSNDVRTQGTYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSR 109
           ++V P +   DVRTQ  YQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGK N + +
Sbjct: 21  ITVLPSHV--DVRTQAMYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKPNSIPK 80

Query: 110 PISLSPVYRNSVIDVESSLSSSDNLSAKAGYGPGESPEQDTGDSVVAGAMKENLCRKTIA 169
            +SL    ++SVID+ESS SSSD++  ++       PE DT D+      K         
Sbjct: 81  SMSLVLANKDSVIDIESSSSSSDSIYQRSS---SSKPELDTIDTATTSGSK--------- 140

Query: 170 YNTFEDQIQGSGRSSELGYFFA-NADTNYQGKEKMGGSYLTNNSNSGITDIDPMDLTESM 229
                    G GR S+ G FF  N + N  G+++   ++ + N +S    ID MD++ESM
Sbjct: 141 ---------GGGRVSDFGPFFTNNIEANITGRDE---THKSGNLSSTTIGIDSMDMSESM 200

Query: 230 QEAMHRSNIEMSWQTWAFLLLIVNSFSFAASAAEFSRKEIPLHVMPTASLIKLDSPLMSF 289
           QEAM RSN++                    S A + RKE+PLHV+PT+SL+ ++SPL SF
Sbjct: 201 QEAMLRSNLD-------------------TSGAGYVRKEVPLHVLPTSSLLPVNSPLASF 260

Query: 290 TDLQHVLFEEERSAYSLAILNNMKDGKVHPMTFIHHTSTYQASMCKLIEYCLSPAISALQ 349
             LQ VL+EEER+AY  ++  NM+DG+VHP+ FIH+TSTYQASMCKLIEYCLSPAI+ALQ
Sbjct: 261 KSLQRVLYEEERAAYYQSVQQNMRDGRVHPLAFIHNTSTYQASMCKLIEYCLSPAINALQ 316

Query: 350 DRVKENEIRLALLAEEARNLEVEAAKANESVPGSPHQVSHGS 391
           DR KEN+IRLA+L +EA  LE +  K  E+     H V HGS
Sbjct: 321 DRQKENKIRLAMLMDEAEVLEAQKLKGAETSRRPSHLV-HGS 316

[Close]

BLAST of Spg038744 vs. TAIR 10
Match: AT3G06820.2 (Mov34/MPN/PAD-1 family protein )

HSP 1 Score: 287.7 bits (735), Expect = 1.5e-77
Identity = 172/342 (50.29%), Postives = 220/342 (64.33%), Query Frame = 0


Query: 50  VSVPPKYTSNDVRTQGTYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSR 109
           ++V P +   DVRTQ  YQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGK N + +
Sbjct: 102 ITVLPSHV--DVRTQAMYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKPNSIPK 161

Query: 110 PISLSPVYRNSVIDVESSLSSSDNLSAKAGYGPGESPEQDTGDSVVAGAMKENLCRKTIA 169
            +SL    ++SVID+ESS SSSD++  ++       PE DT D+      K         
Sbjct: 162 SMSLVLANKDSVIDIESSSSSSDSIYQRSS---SSKPELDTIDTATTSGSK--------- 221

Query: 170 YNTFEDQIQGSGRSSELGYFFA-NADTNYQGKEKMGGSYLTNNSNSGITDIDPMDLTESM 229
                    G GR S+ G FF  N + N  G+++   ++ + N +S    ID MD++ESM
Sbjct: 222 ---------GGGRVSDFGPFFTNNIEANITGRDE---THKSGNLSSTTIGIDSMDMSESM 281

Query: 230 QEAMHRSNIEMSWQTWAFLLLIVNSFSFAASAAEFSRKEIPLHVMPTASLIKLDSPLMSF 289
           QEAM RSN++                    S A + RKE+PLHV+PT+SL+ ++SPL SF
Sbjct: 282 QEAMLRSNLD-------------------TSGAGYVRKEVPLHVLPTSSLLPVNSPLASF 341

Query: 290 TDLQHVLFEEERSAYSLAILNNMKDGKVHPMTFIHHTSTYQASMCKLIEYCLSPAISALQ 349
             LQ VL+EEER+AY  ++  NM+DG+VHP+ FIH+TSTYQASMCKLIEYCLSPAI+ALQ
Sbjct: 342 KSLQRVLYEEERAAYYQSVQQNMRDGRVHPLAFIHNTSTYQASMCKLIEYCLSPAINALQ 397

Query: 350 DRVKENEIRLALLAEEARNLEVEAAKANESVPGSPHQVSHGS 391
           DR KEN+IRLA+L +EA  LE +  K  E+     H V HGS
Sbjct: 402 DRQKENKIRLAMLMDEAEVLEAQKLKGAETSRRPSHLV-HGS 397

[Close]

BLAST of Spg038744 vs. TAIR 10
Match: AT1G80210.2 (Mov34/MPN/PAD-1 family protein )

HSP 1 Score: 282.0 bits (720), Expect = 8.2e-76
Identity = 158/312 (50.64%), Postives = 205/312 (65.71%), Query Frame = 0


Query: 50  VSVPPKYTSNDVRTQGTYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSR 109
           ++V P +   DVRTQ  YQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGK N + +
Sbjct: 102 ITVLPSHV--DVRTQAMYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKPNSIPK 161

Query: 110 PISLSPVYRNSVIDVESSLSSSDNLSAKAGYGPGESPEQDTGDSVVAGAMKENLCRKTIA 169
            +SL    ++SVID+ESS SSSD++  ++    G++PE DT D+      K         
Sbjct: 162 SMSLVLANKDSVIDLESSFSSSDSIYQRSSSARGDNPELDTSDTATTSGSK--------- 221

Query: 170 YNTFEDQIQGSGRSSELGYFFA-NADTNYQGKEKMGGSYLTNNSNSGITDIDPMDLTESM 229
                    G GR S+   FF  N + N   ++   G+Y     +S   +ID MD++ESM
Sbjct: 222 ---------GGGRVSDFEAFFVNNTEANNTRRDGTSGNY-----SSTAIEIDSMDMSESM 281

Query: 230 QEAMHRSNIEMSWQTWAFLLLIVNSFSFAASAAEFSRKEIPLHVMPTASLIKLDSPLMSF 289
           QEAMHRSN+E                    S   + RKE+PLHV+PT+SL++L+SPL SF
Sbjct: 282 QEAMHRSNLE-------------------TSGVGYVRKEVPLHVLPTSSLLQLNSPLASF 341

Query: 290 TDLQHVLFEEERSAYSLAILNNMKDGKVHPMTFIHHTSTYQASMCKLIEYCLSPAISALQ 349
             LQ VL+EEER+AY  ++  + +DG+VHP+ FIH+TSTYQASMCKLIEYCLSPAI+ALQ
Sbjct: 342 KSLQRVLYEEERAAYHQSVQQSKRDGRVHPLAFIHNTSTYQASMCKLIEYCLSPAINALQ 369

Query: 350 DRVKENEIRLAL 361
           DR+KEN+IR+ +
Sbjct: 402 DRLKENKIRVCV 369

The following BLAST results are available for this feature:

BLAST of Spg038744 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152213.1	2.7e-161	82.40	lys-63-specific deubiquitinase BRCC36 isoform X1 [Cucumis sativus] >KGN52872.1 h...	[more]
XP_031740561.1	2.7e-161	82.40	lys-63-specific deubiquitinase BRCC36 isoform X2 [Cucumis sativus]	[more]
XP_008454260.1	1.3e-160	82.13	PREDICTED: lys-63-specific deubiquitinase BRCC36 isoform X1 [Cucumis melo]	[more]
KAA0044426.1	1.3e-160	82.13	lys-63-specific deubiquitinase BRCC36 isoform X1 [Cucumis melo var. makuwa]	[more]
XP_008454262.1	1.3e-160	82.13	PREDICTED: lys-63-specific deubiquitinase BRCC36 isoform X2 [Cucumis melo] >TYK2...	[more]

BLAST of Spg038744 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5R9L6	1.2e-07	48.44	Lys-63-specific deubiquitinase BRCC36 OS=Pongo abelii OX=9601 GN=BRCC3 PE=2 SV=1	[more]
P46737	3.5e-07	41.89	Lys-63-specific deubiquitinase BRCC36 OS=Mus musculus OX=10090 GN=Brcc3 PE=1 SV=...	[more]
B2RYM5	6.0e-07	40.54	Lys-63-specific deubiquitinase BRCC36 OS=Rattus norvegicus OX=10116 GN=Brcc3 PE=...	[more]
A5PJP6	7.9e-07	55.32	Lys-63-specific deubiquitinase BRCC36 OS=Bos taurus OX=9913 GN=BRCC3 PE=2 SV=1	[more]
B0KWU8	7.9e-07	55.32	Lys-63-specific deubiquitinase BRCC36 OS=Callithrix jacchus OX=9483 GN=BRCC3 PE=...	[more]

BLAST of Spg038744 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KWR1	1.3e-161	82.40	MPN domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G004830 PE=3 SV...	[more]
A0A5D3E152	6.4e-161	82.13	Lys-63-specific deubiquitinase BRCC36 isoform X1 OS=Cucumis melo var. makuwa OX=...	[more]
A0A5A7TQP2	6.4e-161	82.13	Lys-63-specific deubiquitinase BRCC36 isoform X1 OS=Cucumis melo var. makuwa OX=...	[more]
A0A1S3BZE9	6.4e-161	82.13	lys-63-specific deubiquitinase BRCC36 isoform X2 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A1S3BY68	6.4e-161	82.13	lys-63-specific deubiquitinase BRCC36 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1...	[more]

BLAST of Spg038744 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80210.1	2.5e-80	50.29	Mov34/MPN/PAD-1 family protein	[more]
AT3G06820.1	1.5e-77	50.29	Mov34/MPN/PAD-1 family protein	[more]
AT3G06820.2	1.5e-77	50.29	Mov34/MPN/PAD-1 family protein	[more]
AT1G80210.2	8.2e-76	50.64	Mov34/MPN/PAD-1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 344..378
None	No IPR available	GENE3D	3.40.140.10	Cytidine Deaminase, domain 2	coord: 50..114 e-value: 2.9E-9 score: 38.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 375..424
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 131..152
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 380..414
None	No IPR available	PANTHER	PTHR10410:SF2	LYS-63-SPECIFIC DEUBIQUITINASE BRCC36-RELATED	coord: 60..375
None	No IPR available	PANTHER	PTHR10410	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED	coord: 60..375
IPR040749	BRCC36, C-terminal helical domain	PFAM	PF18110	BRCC36_C	coord: 285..368 e-value: 2.7E-22 score: 78.7

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg038744.1	Spg038744.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006302	double-strand break repair
biological_process	GO:0070537	histone H2A K63-linked deubiquitination
cellular_component	GO:0070531	BRCA1-A complex
cellular_component	GO:0070552	BRISC complex
molecular_function	GO:0070122	isopeptidase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0008237	metallopeptidase activity
molecular_function	GO:0031593	polyubiquitin modification-dependent protein binding
molecular_function	GO:0004843	thiol-dependent deubiquitinase