Spg036939 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg036939
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	DDE Tnp4 domain-containing protein
Location	scaffold5: 46558740 .. 46561435 (-)
RNA-Seq Expression	Spg036939
Synteny	Spg036939

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTGGGGGAGTGAGCTTTGGGCTTTTGTATTTATTGGATTCTCTGACTTGCTCTGCTTCATTGGTCAGTCATTTTAGTTGACTTTACTTTAATTCTGTCCACTCTGTCTCCTTTTCCATCCTTCCCTTTCTATTTTACTGCACTTCTTTAATCTCTACTTAAGACAAATATGGAATTTTGGGATCTTGGGTTAATCTCATTAAACCCAAAATCAAAAAGTAAAACTTATATACATACTTTATAGGTTAAAAATCACTTTTGGTCCTTAAACTTTCATGGAAGTAAGTAACAATTTAGTCTCTGAATTTTGATTTGTAACGATTTAATCCCTGTACTTTCAATTTTGTAACAATTTAGTTATTGTACTTTCAATTTTGTAACAATTTAGTCACTAAACTTTAATAAGTAACAATTTAGTTCCTATACTTTCAAATTTGTAACGATTTAGTCCCTATCGTAGAAAATTAATGTAAAGATTTAATGAAATTTCTTACCTAGATAAATTAATAAACTAATTTGGGACCCAATATGTTAATAAGCTATAAAGTTTAATCATTAAATAATAAAAGGCGACATTTAATTTTGATAAATTTTTTTGTGACAAGGACTAAATTGTTACAAATTTGAAAGTATAGGGACTAAATTGTTACTTATTAAAGTTTAGAGACTAAATTGTTACAAAATTGAAAGATTAAATCGTTACAAATCAAAGTTCATGAACCAAATTGTTACTTTCATGAAAGTGATTTTTAACCTACTTTATATATATATGTTTTTCAAGTTTAACAATTCTTGTGTGAGACATCAAATCAAACTATTACCTTTGTGAAGATAATTAATGTCTTATCTATTAAGTTATATCTCTAAATTTACTATACTTACTTTTTTTAAAAAAATAATTTACTATACTTACTTTATAATGATGAACTCACAATATTAATTTTCTATAATCTATTCTTCTAAACTATATAAAATATAAACTATACAATCTCATGCAAGGTAGAGCCTTAAACAATGTCATGAAAATAAATTAAAATATCTCCATTTTTCTCTCTTGTAGTTATTGATACCAACAAATTGATTATTGTTATTATTAAATCTACTAAATGTATTGTTTATCATTACATCATCATCCCTTCTGACATATGTATATTACATACATTTTTTTTTTAACATAATGTATATTGCATATATTTAAGCATATAAATATGTTACATACATTACATATATATATTATATGAATAGAAAAGTAAAAAGTGAAAAGTGGGAGGACAAAATTGAGAATAAATAAAAAAGGCTGCACTAACAATCATTTCAAAACCCATTTCAATTTTCACCTCTCTGTTTCTCTCTCCTCCATTTCCAAATTCCAAATCCTTCATCCTTTCTCTCTCTTCTTCTTCTTCTTTGTTTTTATTTCTCATTCAAATTTCGGTCTCTGCTTCTCTACACACAGAGAGCACAAGAGATGTTGAATCCGGCGAACGATCTGTTACCGCCGCCGTCTTCTCCGACCAATTCATCCATCTCCTCCTCCGATCTCGACACTGAGGTGCCCACCTTCGCCTTCTCCCATTTTCTGATTCTGATTCTCTATCTGTTTTTGATTTTGGGAATTCAATTCTGTTTTGCAGTCTACAGGTTCGTTCTTCCATGACAGGAGCACGAGCTTGGGGACTCTAATGGGGGTGAGCTTCCCGGCGATTACCTTCCGAGTGCCCTCACAGAACCGAGACCAACACGCCGCCGCGAACGCCGCCGCCGCAGGCGGCGGGGGCGGTTCCCGGAAGAGCAAGAAGCCGAAGAGAAAAACGACGACGGCGCCGGCACTGGTCGCAGATCGGAAGCGGAGGTGGTGGCGGCTGTGCAGGGACGATGGCGTTAAGCCGGCATCTCTCGGTGATTTTCTCGAGGTGGAACGGAGATTTGGGGACGGTGCTTTTTATGGCAACGCGGTGGATCTGGAAGGCGTGGTTGCGGCGGATCAACAGAGGAATGGGCGGAATTTGTTCGCCGACGGGAGAGTTCTTCCGCCGGCGCAAACGGAGGAAGAAGCGTCGGCGGCGGGGGCTCTATGCCGATTTTCCGTATCGCTCACCGGAATTTGCAGCGGCGGTGCCGGCTAAAATGTGGGATTTGATTTGTCCAGTTTATTTAAAAATATATCATATTTAATCAATCAAATGCTTTAATTAATGTGGAAGAAAAAAGAAAAAAAAATGTCACCTTTATCGTGTAGGTGACCCTCCTCTTCTTTTTTTCTTTTTCTTTTTTTTTTTCTTTGATTTCCTTTAATCATCTCACAGGTTACTTCTTCTCTCTTTTTTTTCTTCCCTTTTTCTTTTTGAAAATAATAATAAAAAAAATGACACTCAGATCTTCATCTATGAAGATTTTGGAGATTTTCCTGTTCAGGCTGTGAATTTTTTTTTTTTTTTTTTTGAAGAACCTGTTCAGGCTGTGAATTATGAACTATGTTCGAGCAAAAATCATATATTAATTTGGAAAAAAGATAGCCCTTAACTTTATATATATATTTTTTCCAATCATATCTGATACCATTAGAGTTATCAAATACTAAATTAGCTCCTTATTTAACCCCAAATTAAAATTTGAAATTTGAATTACGTTTCTATTTTAATTTTTTCCATTTGATAGTTTAAACTATCAAGAAAGACAATTTGATTATGTTGTCC

mRNA sequence

TGTGGGGGAGTGAGCTTTGGGCTTTTGTATTTATTGGATTCTCTGACTTGCTCTGCTTCATTGTCTACAGGTTCGTTCTTCCATGACAGGAGCACGAGCTTGGGGACTCTAATGGGGGTGAGCTTCCCGGCGATTACCTTCCGAGTGCCCTCACAGAACCGAGACCAACACGCCGCCGCGAACGCCGCCGCCGCAGGCGGCGGGGGCGGTTCCCGGAAGAGCAAGAAGCCGAAGAGAAAAACGACGACGGCGCCGGCACTGGTCGCAGATCGGAAGCGGAGGTGGTGGCGGCTGTGCAGGGACGATGGCGTTAAGCCGGCATCTCTCGGTGATTTTCTCGAGGTGGAACGGAGATTTGGGGACGGTGCTTTTTATGGCAACGCGGTGGATCTGGAAGGCGTGGTTGCGGCGGATCAACAGAGGAATGGGCGGAATTTGTTCGCCGACGGGAGAGTTCTTCCGCCGGCGCAAACGGAGGAAGAAGCGTCGGCGGCGGGGGCTCTATGCCGATTTTCCGTATCGCTCACCGGAATTTGCAGCGGCGGTGCCGGCTAA

Coding sequence (CDS)

TGTGGGGGAGTGAGCTTTGGGCTTTTGTATTTATTGGATTCTCTGACTTGCTCTGCTTCATTGTCTACAGGTTCGTTCTTCCATGACAGGAGCACGAGCTTGGGGACTCTAATGGGGGTGAGCTTCCCGGCGATTACCTTCCGAGTGCCCTCACAGAACCGAGACCAACACGCCGCCGCGAACGCCGCCGCCGCAGGCGGCGGGGGCGGTTCCCGGAAGAGCAAGAAGCCGAAGAGAAAAACGACGACGGCGCCGGCACTGGTCGCAGATCGGAAGCGGAGGTGGTGGCGGCTGTGCAGGGACGATGGCGTTAAGCCGGCATCTCTCGGTGATTTTCTCGAGGTGGAACGGAGATTTGGGGACGGTGCTTTTTATGGCAACGCGGTGGATCTGGAAGGCGTGGTTGCGGCGGATCAACAGAGGAATGGGCGGAATTTGTTCGCCGACGGGAGAGTTCTTCCGCCGGCGCAAACGGAGGAAGAAGCGTCGGCGGCGGGGGCTCTATGCCGATTTTCCGTATCGCTCACCGGAATTTGCAGCGGCGGTGCCGGCTAA

Protein sequence

CGGVSFGLLYLLDSLTCSASLSTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAANAAAAGGGGGSRKSKKPKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGDFLEVERRFGDGAFYGNAVDLEGVVAADQQRNGRNLFADGRVLPPAQTEEEASAAGALCRFSVSLTGICSGGAG

Homology

[Close]

BLAST of Spg036939 vs. NCBI nr
Match: TYJ99038.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa])

HSP 1 Score: 309.3 bits (791), Expect = 2.2e-80
Identity = 167/217 (76.96%), Postives = 171/217 (78.80%), Query Frame = 0


Query: 1   CGGVSFGLLYLLDSLTCSASL---------------------------------STGSFF 60
           CGGVSF +LYLLDSLT SASL                                 STGSFF
Sbjct: 460 CGGVSFAVLYLLDSLTSSASLRERKEMLNPANDLLPPPSSPTNSSISSSDLDTESTGSFF 519

Query: 61  HDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAANAAAAGGGGGSRKSKKPKRKTTTAPAL 120
           HDRSTSLGTLMGVSFPAITFRVPSQNRDQH AA   A   GGGSRKSKK KRKTTTAPAL
Sbjct: 520 HDRSTSLGTLMGVSFPAITFRVPSQNRDQHTAATVTA---GGGSRKSKKTKRKTTTAPAL 579

Query: 121 VADRKRRWWRLCRDDGVKPASLGDFLEVERRFGDGAFYGNAVDLEGVVAADQQRNGRNLF 180
           VADRKRRWWRLCRDDGVKPASLG+FLEVERRFGDGAFYGNAVDLEGVV ADQQRNGR+LF
Sbjct: 580 VADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVTADQQRNGRSLF 639

Query: 181 ADGRVLPPAQTEEEASAAGALCRFSVSLTGICSGGAG 185
           ADGRVLPPAQTEE+ SA GALCRFSVSLTGICSGGAG
Sbjct: 640 ADGRVLPPAQTEEDTSATGALCRFSVSLTGICSGGAG 673

[Close]

BLAST of Spg036939 vs. NCBI nr
Match: XP_022924210.1 (uncharacterized protein At3g17950 [Cucurbita moschata] >XP_022924211.1 uncharacterized protein At3g17950 [Cucurbita moschata])

HSP 1 Score: 299.7 bits (766), Expect = 1.8e-77
Identity = 152/163 (93.25%), Postives = 157/163 (96.32%), Query Frame = 0


Query: 22  STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAANAAAAGGGGGSRKSKKPKRKT 81
           STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAA AAA   GGGSRKSKKPKRKT
Sbjct: 29  STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAATAAA---GGGSRKSKKPKRKT 88

Query: 82  TTAPALVADRKRRWWRLCRDDGVKPASLGDFLEVERRFGDGAFYGNAVDLEGVVAADQQR 141
           T APALVADRKRRWWRLCRDDGVKPASLG+FLEVERRFGDGAF+GNAVDLEGVV+ADQQR
Sbjct: 89  TAAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFFGNAVDLEGVVSADQQR 148

Query: 142 NGRNLFADGRVLPPAQTEEEASAAGALCRFSVSLTGICSGGAG 185
           NGR+LFADGRVLPPAQTEE+ SAAGALCRFSVSLTGICSGGAG
Sbjct: 149 NGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG 188

[Close]

BLAST of Spg036939 vs. NCBI nr
Match: KAG6584313.1 (hypothetical protein SDJN03_20245, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019905.1 hypothetical protein SDJN02_18872 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 298.5 bits (763), Expect = 3.9e-77
Identity = 151/163 (92.64%), Postives = 157/163 (96.32%), Query Frame = 0


Query: 22  STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAANAAAAGGGGGSRKSKKPKRKT 81
           STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAA AAA   GGGSRKSKKPKRKT
Sbjct: 29  STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAATAAA---GGGSRKSKKPKRKT 88

Query: 82  TTAPALVADRKRRWWRLCRDDGVKPASLGDFLEVERRFGDGAFYGNAVDLEGVVAADQQR 141
           T APALVADRKRRWWRLCRDDGVKPASLG+FLEVERRFGDGAF+GNAVDLEGVV+ADQQR
Sbjct: 89  TAAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFFGNAVDLEGVVSADQQR 148

Query: 142 NGRNLFADGRVLPPAQTEEEASAAGALCRFSVSLTGICSGGAG 185
           NGR+LFADGRVLPPAQT+E+ SAAGALCRFSVSLTGICSGGAG
Sbjct: 149 NGRSLFADGRVLPPAQTDEDTSAAGALCRFSVSLTGICSGGAG 188

[Close]

BLAST of Spg036939 vs. NCBI nr
Match: XP_023520118.1 (uncharacterized protein At3g17950-like [Cucurbita pepo subsp. pepo] >XP_023520119.1 uncharacterized protein At3g17950-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 298.5 bits (763), Expect = 3.9e-77
Identity = 151/163 (92.64%), Postives = 157/163 (96.32%), Query Frame = 0


Query: 22  STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAANAAAAGGGGGSRKSKKPKRKT 81
           STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQH+AA AAA   GGGSRKSKKPKRKT
Sbjct: 29  STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHSAATAAA---GGGSRKSKKPKRKT 88

Query: 82  TTAPALVADRKRRWWRLCRDDGVKPASLGDFLEVERRFGDGAFYGNAVDLEGVVAADQQR 141
           T APALVADRKRRWWRLCRDDGVKPASLG+FLEVERRFGDGAF+GNAVDLEGVV+ADQQR
Sbjct: 89  TAAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFFGNAVDLEGVVSADQQR 148

Query: 142 NGRNLFADGRVLPPAQTEEEASAAGALCRFSVSLTGICSGGAG 185
           NGR+LFADGRVLPPAQTEE+ SAAGALCRFSVSLTGICSGGAG
Sbjct: 149 NGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG 188

[Close]

BLAST of Spg036939 vs. NCBI nr
Match: XP_038895169.1 (uncharacterized protein At3g17950 [Benincasa hispida])

HSP 1 Score: 294.3 bits (752), Expect = 7.4e-76
Identity = 149/163 (91.41%), Postives = 155/163 (95.09%), Query Frame = 0


Query: 22  STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAANAAAAGGGGGSRKSKKPKRKT 81
           STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQH AA AAA   GGGSRKSKK KRKT
Sbjct: 29  STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHTAATAAA---GGGSRKSKKTKRKT 88

Query: 82  TTAPALVADRKRRWWRLCRDDGVKPASLGDFLEVERRFGDGAFYGNAVDLEGVVAADQQR 141
           +TAPALVADRKRRWWRLCRDDGVKPASLG+FLEVERRFGDGAFYGNAVDLEGVVA DQQR
Sbjct: 89  STAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVATDQQR 148

Query: 142 NGRNLFADGRVLPPAQTEEEASAAGALCRFSVSLTGICSGGAG 185
           NGR+LFADGRVLPPA+TE++ SAAGALCRFSVSLTGICSGGAG
Sbjct: 149 NGRSLFADGRVLPPAETEDDTSAAGALCRFSVSLTGICSGGAG 188

[Close]

BLAST of Spg036939 vs. ExPASy Swiss-Prot
Match: Q6DR24 (Uncharacterized protein At3g17950 OS=Arabidopsis thaliana OX=3702 GN=Y-3 PE=1 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.9e-29
Identity = 90/190 (47.37%), Postives = 111/190 (58.42%), Query Frame = 0


Query: 22  STGSFFHDRSTSLGTLMGVSFPA---ITFRVPSQNRDQHAAANAAAAGGGGGSRKSKKPK 81
           STGSFFHDRS +LGTLMG SF A   + FR  S+     + A + A+     +R++ + K
Sbjct: 24  STGSFFHDRSITLGTLMGFSFTATMPMPFRASSRRHVSPSVAISRAS--SSNARRNHQRK 83

Query: 82  RKTTTAPALVADRKRRWWRLCRDD-------GV-------KPASLGDFLEVERRFGDGAF 141
           R  + +      R+R+WWR CRDD       G+       K +SLG++LEVERRFGD A 
Sbjct: 84  RPPSNSAEPEPHRRRKWWRFCRDDDDDAAGNGIHRGTGDSKRSSLGEYLEVERRFGDEAV 143

Query: 142 YGNA-VDLEGVVAA---DQQ--RNGRNLFADGRVLPPAQTE----EEASAAGALCRFSVS 185
           Y +A  +LE  V A   DQQ     R LFADGRVLPPA  E    E    A +LCRF VS
Sbjct: 144 YNSAEAELEDAVVARYQDQQPVMGERALFADGRVLPPASAEVVTGEGTPVATSLCRFPVS 203

[Close]

BLAST of Spg036939 vs. ExPASy TrEMBL
Match: A0A5D3BLI7 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002420 PE=3 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 1.1e-80
Identity = 167/217 (76.96%), Postives = 171/217 (78.80%), Query Frame = 0


Query: 1   CGGVSFGLLYLLDSLTCSASL---------------------------------STGSFF 60
           CGGVSF +LYLLDSLT SASL                                 STGSFF
Sbjct: 460 CGGVSFAVLYLLDSLTSSASLRERKEMLNPANDLLPPPSSPTNSSISSSDLDTESTGSFF 519

Query: 61  HDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAANAAAAGGGGGSRKSKKPKRKTTTAPAL 120
           HDRSTSLGTLMGVSFPAITFRVPSQNRDQH AA   A   GGGSRKSKK KRKTTTAPAL
Sbjct: 520 HDRSTSLGTLMGVSFPAITFRVPSQNRDQHTAATVTA---GGGSRKSKKTKRKTTTAPAL 579

Query: 121 VADRKRRWWRLCRDDGVKPASLGDFLEVERRFGDGAFYGNAVDLEGVVAADQQRNGRNLF 180
           VADRKRRWWRLCRDDGVKPASLG+FLEVERRFGDGAFYGNAVDLEGVV ADQQRNGR+LF
Sbjct: 580 VADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVTADQQRNGRSLF 639

Query: 181 ADGRVLPPAQTEEEASAAGALCRFSVSLTGICSGGAG 185
           ADGRVLPPAQTEE+ SA GALCRFSVSLTGICSGGAG
Sbjct: 640 ADGRVLPPAQTEEDTSATGALCRFSVSLTGICSGGAG 673

[Close]

BLAST of Spg036939 vs. ExPASy TrEMBL
Match: A0A0A0LQI1 (DDE Tnp4 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G042870 PE=3 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 2.7e-79
Identity = 165/217 (76.04%), Postives = 169/217 (77.88%), Query Frame = 0


Query: 1   CGGVSFGLLYLLDSLTCSASL---------------------------------STGSFF 60
           CGGVSF +LYLLDSLT SASL                                 STGSFF
Sbjct: 304 CGGVSFAVLYLLDSLTSSASLRERKEMLNPANDLLPPPSSPTNSSISSSDLDTESTGSFF 363

Query: 61  HDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAANAAAAGGGGGSRKSKKPKRKTTTAPAL 120
           HDRSTSLGTLMGVSFPAITFRVPSQNRDQH AA   A   GGGSRKSKK KRKTT APAL
Sbjct: 364 HDRSTSLGTLMGVSFPAITFRVPSQNRDQHTAATVTA---GGGSRKSKKTKRKTTMAPAL 423

Query: 121 VADRKRRWWRLCRDDGVKPASLGDFLEVERRFGDGAFYGNAVDLEGVVAADQQRNGRNLF 180
           VADRKRRWWRLCRDDGVKPASLG+FLEVERRFGDGAFYGNAVDLEGVVAADQQRNGR+LF
Sbjct: 424 VADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVAADQQRNGRSLF 483

Query: 181 ADGRVLPPAQTEEEASAAGALCRFSVSLTGICSGGAG 185
           ADGRVLPPAQTEE+ S A  LCRFSVSLTGICSGGAG
Sbjct: 484 ADGRVLPPAQTEEDTSGAATLCRFSVSLTGICSGGAG 517

[Close]

BLAST of Spg036939 vs. ExPASy TrEMBL
Match: A0A6J1E8Y2 (uncharacterized protein At3g17950 OS=Cucurbita moschata OX=3662 GN=LOC111431726 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 8.5e-78
Identity = 152/163 (93.25%), Postives = 157/163 (96.32%), Query Frame = 0


Query: 22  STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAANAAAAGGGGGSRKSKKPKRKT 81
           STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAA AAA   GGGSRKSKKPKRKT
Sbjct: 29  STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAATAAA---GGGSRKSKKPKRKT 88

Query: 82  TTAPALVADRKRRWWRLCRDDGVKPASLGDFLEVERRFGDGAFYGNAVDLEGVVAADQQR 141
           T APALVADRKRRWWRLCRDDGVKPASLG+FLEVERRFGDGAF+GNAVDLEGVV+ADQQR
Sbjct: 89  TAAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFFGNAVDLEGVVSADQQR 148

Query: 142 NGRNLFADGRVLPPAQTEEEASAAGALCRFSVSLTGICSGGAG 185
           NGR+LFADGRVLPPAQTEE+ SAAGALCRFSVSLTGICSGGAG
Sbjct: 149 NGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG 188

[Close]

BLAST of Spg036939 vs. ExPASy TrEMBL
Match: A0A1S4DUB1 (uncharacterized protein At3g17950 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503240 PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 6.1e-76
Identity = 149/163 (91.41%), Postives = 152/163 (93.25%), Query Frame = 0


Query: 22  STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAANAAAAGGGGGSRKSKKPKRKT 81
           STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQH AA   A   GGGSRKSKK KRKT
Sbjct: 29  STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHTAATVTA---GGGSRKSKKTKRKT 88

Query: 82  TTAPALVADRKRRWWRLCRDDGVKPASLGDFLEVERRFGDGAFYGNAVDLEGVVAADQQR 141
           TTAPALVADRKRRWWRLCRDDGVKPASLG+FLEVERRFGDGAFYGNAVDLEGVV ADQQR
Sbjct: 89  TTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVTADQQR 148

Query: 142 NGRNLFADGRVLPPAQTEEEASAAGALCRFSVSLTGICSGGAG 185
           NGR+LFADGRVLPPAQTEE+ SA GALCRFSVSLTGICSGGAG
Sbjct: 149 NGRSLFADGRVLPPAQTEEDTSATGALCRFSVSLTGICSGGAG 188

[Close]

BLAST of Spg036939 vs. ExPASy TrEMBL
Match: A0A1S3CPP8 (uncharacterized protein At3g17950 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503240 PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 6.1e-76
Identity = 149/163 (91.41%), Postives = 152/163 (93.25%), Query Frame = 0


Query: 22  STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAANAAAAGGGGGSRKSKKPKRKT 81
           STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQH AA   A   GGGSRKSKK KRKT
Sbjct: 41  STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHTAATVTA---GGGSRKSKKTKRKT 100

Query: 82  TTAPALVADRKRRWWRLCRDDGVKPASLGDFLEVERRFGDGAFYGNAVDLEGVVAADQQR 141
           TTAPALVADRKRRWWRLCRDDGVKPASLG+FLEVERRFGDGAFYGNAVDLEGVV ADQQR
Sbjct: 101 TTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVTADQQR 160

Query: 142 NGRNLFADGRVLPPAQTEEEASAAGALCRFSVSLTGICSGGAG 185
           NGR+LFADGRVLPPAQTEE+ SA GALCRFSVSLTGICSGGAG
Sbjct: 161 NGRSLFADGRVLPPAQTEEDTSATGALCRFSVSLTGICSGGAG 200

[Close]

BLAST of Spg036939 vs. TAIR 10
Match: AT3G17950.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; Has 63 Blast hits to 63 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 130.6 bits (327), Expect = 1.3e-30
Identity = 90/190 (47.37%), Postives = 111/190 (58.42%), Query Frame = 0


Query: 22  STGSFFHDRSTSLGTLMGVSFPA---ITFRVPSQNRDQHAAANAAAAGGGGGSRKSKKPK 81
           STGSFFHDRS +LGTLMG SF A   + FR  S+     + A + A+     +R++ + K
Sbjct: 24  STGSFFHDRSITLGTLMGFSFTATMPMPFRASSRRHVSPSVAISRAS--SSNARRNHQRK 83

Query: 82  RKTTTAPALVADRKRRWWRLCRDD-------GV-------KPASLGDFLEVERRFGDGAF 141
           R  + +      R+R+WWR CRDD       G+       K +SLG++LEVERRFGD A 
Sbjct: 84  RPPSNSAEPEPHRRRKWWRFCRDDDDDAAGNGIHRGTGDSKRSSLGEYLEVERRFGDEAV 143

Query: 142 YGNA-VDLEGVVAA---DQQ--RNGRNLFADGRVLPPAQTE----EEASAAGALCRFSVS 185
           Y +A  +LE  V A   DQQ     R LFADGRVLPPA  E    E    A +LCRF VS
Sbjct: 144 YNSAEAELEDAVVARYQDQQPVMGERALFADGRVLPPASAEVVTGEGTPVATSLCRFPVS 203

[Close]

BLAST of Spg036939 vs. TAIR 10
Match: AT3G17950.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 103.2 bits (256), Expect = 2.3e-22
Identity = 76/174 (43.68%), Postives = 96/174 (55.17%), Query Frame = 0


Query: 38  MGVSFPA---ITFRVPSQNRDQHAAANAAAAGGGGGSRKSKKPKRKTTTAPALVADRKRR 97
           MG SF A   + FR  S+     + A + A+     +R++ + KR  + +      R+R+
Sbjct: 1   MGFSFTATMPMPFRASSRRHVSPSVAISRAS--SSNARRNHQRKRPPSNSAEPEPHRRRK 60

Query: 98  WWRLCRDD-------GV-------KPASLGDFLEVERRFGDGAFYGNA-VDLEGVVAA-- 157
           WWR CRDD       G+       K +SLG++LEVERRFGD A Y +A  +LE  V A  
Sbjct: 61  WWRFCRDDDDDAAGNGIHRGTGDSKRSSLGEYLEVERRFGDEAVYNSAEAELEDAVVARY 120

Query: 158 -DQQ--RNGRNLFADGRVLPPAQTE----EEASAAGALCRFSVSLTGICSGGAG 185
            DQQ     R LFADGRVLPPA  E    E    A +LCRF VSLTGICSGG G
Sbjct: 121 QDQQPVMGERALFADGRVLPPASAEVVTGEGTPVATSLCRFPVSLTGICSGGGG 172

The following BLAST results are available for this feature:

BLAST of Spg036939 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ99038.1	2.2e-80	76.96	putative nuclease HARBI1 [Cucumis melo var. makuwa]	[more]
XP_022924210.1	1.8e-77	93.25	uncharacterized protein At3g17950 [Cucurbita moschata] >XP_022924211.1 uncharact...	[more]
KAG6584313.1	3.9e-77	92.64	hypothetical protein SDJN03_20245, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023520118.1	3.9e-77	92.64	uncharacterized protein At3g17950-like [Cucurbita pepo subsp. pepo] >XP_02352011...	[more]
XP_038895169.1	7.4e-76	91.41	uncharacterized protein At3g17950 [Benincasa hispida]	[more]

BLAST of Spg036939 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6DR24	1.9e-29	47.37	Uncharacterized protein At3g17950 OS=Arabidopsis thaliana OX=3702 GN=Y-3 PE=1 SV...	[more]

BLAST of Spg036939 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BLI7	1.1e-80	76.96	Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A0A0LQI1	2.7e-79	76.04	DDE Tnp4 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G042870 PE...	[more]
A0A6J1E8Y2	8.5e-78	93.25	uncharacterized protein At3g17950 OS=Cucurbita moschata OX=3662 GN=LOC111431726 ...	[more]
A0A1S4DUB1	6.1e-76	91.41	uncharacterized protein At3g17950 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10350...	[more]
A0A1S3CPP8	6.1e-76	91.41	uncharacterized protein At3g17950 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10350...	[more]

BLAST of Spg036939 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G17950.1	1.3e-30	47.37	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G17950.2	2.3e-22	43.68	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..86
None	No IPR available	PANTHER	PTHR33544:SF15	BNAANNG11020D PROTEIN	coord: 22..184
IPR040344	Uncharacterized protein At3g17950-like	PANTHER	PTHR33544	FAMILY NOT NAMED	coord: 22..184

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg036939.1	Spg036939.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding