Spg036921 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg036921
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Centromere protein S-like
Location	scaffold5: 43989922 .. 43992088 (+)
RNA-Seq Expression	Spg036921
Synteny	Spg036921

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGATCCCTATATAACGGTATGCAGCCAAGTTTTGTTCTTAAAATATTCAACTAGAAATGGAGAAATTTTTCTTATTTTCTACGTTTTTGAGAATTCTAGTAAAACCAACCCAATAAATAACACAAAATTCCCCAAAAAAGGAAAAGAAAAAAGAAAAAATTGAAACGGTTCGTTTAAGGCCATTTCCCGTCGCCAGCGACCAGTGCCAATTCTGGAGGAAATAAAGGCGGATTGAAACAGGTGCAGTCAAAAGTAGTAAAATCTGTGTCCAGAAGGCTCTGCAATGGAAACTGGGATGGAAGAAGAAGACTCCATGTCCGAACACTTGAGGGACCGATTCCGTCTCTCCACCATTTCCATCGCTGAAGCTGAAGGTCAATTATCTTCTTATTCTCTTCATTTCCAAGCCTGTCTGGTTTTAGAATCGACAGGAGAAAGAGAAAGTATTATCCTCCGATTACTGAATTCCATGCCTGGGCGAACTTTTCATATTTGTGTTGACTTGCTCTATTTTTGAACTGTTTGGTTTGTTTTGCAGCGAATAGAAGCGGCATGGAAATCTCTGAAACTGTGATGGCTTGTGTCGCTGAGTTAGCGTTCAAATATACAAGTCAGTTTACTTCCGTTTTAGGACAGTTTTGAGACTGCAGTATCATTTTGAGCACTTGGCTTCTACTTAACTATACTCTGAAAAATATATAGATCACTGAATTGCTAATTCCACTCTTTGTTAGACTTACATTCCGCATTGTGTAGATAACCTAATTGCTAATTTTTTTAATATCCCTTCTCTTCTAGCTGTGTTTCCATCATTTTTAGGTGGTTTATATGTAGTTTCAGTTTGAAATTTCCTTATTATTTAGCATGCATTCGGTTTGTTGGGATGCCTCTCTGTGCTTTGTAGTTAAATTGTGTGAACTGTGACCTAGTTGGAAGGAAACTACATAACTTTGGTCAAGTTTAAGTCAGGAAAATAGTTGCGAGAAGAACAAATGGAGTGACTATTGTGATATCTTAGAGAATGACATTGCATGACACTTTTGGGTTCTAATCAGATGTCCTTAGAGTTCATATCAATGTTCTTTTAGAACGAGGGACAAAAAAGATCTCCTTCATTCTAACTTGAGGCTTACACCTTACAGTGTGTTAGGCCTTAACCTCATCATGCTCTTGTGGGAGCATATGCCTCAGATAGAAGAGGTGTAAGACTCTTATGAACCAAAAGTGGTGTAATCTTGAGACTTAGATTTTGTGCTTCACCTCAAGGTATACCATGGGAAGGAGAGTTCTACTTGTCTTGTGTTTCTTTGTTTATATGTCAATCTCGTAAAGAAGACATAGTTATTATTTTAATTTATATATATATATATTAGCTTCAAGTCTGTTTTCTTCTACTGATGAGTACATTTTCCATTGTCTAAAAGAAGTATATTTATACCTATATCATATTGCATGAAATTAATGTATTCTTTCATCATACGCATGAATGATTTGGTAGGTTTAAAAGGTTTCAACCAGACCTTGAGTTCATACCGTGGTGTAGGGTCATGCTTATGTTTGTAGTCATAGGGCTAACATATGAACTACAAATGGTATAATTTATGCAATGAAAACATAGTTTTGTTTACTCTGCTGCTGTAGTTGCATCTCAGGCAGCAAGGAAAGAAGATAATTCAGTCATATGTCTGTTTGATTTTTTTTATGATTCTTGAAGCGTGCAATGAGATAACGGACTGGTAACTTGTGTAGCAGAACAGTTGGCAAAAGACCTTGAGTTATTTTCTCAGCATGGTGGTCGGAAAACTGTGAATACGGAAGACGTCATACTATCAGGTTAGATTATCCGATTCCCAAGTTTGCCTGTGCTGTAATATATATGTTGATCTCAGCTCGCACTATAATTTTTTGTTTGTTTTGCTGTATTACTGTCTAGTTATATTTAGTCAATATGCAGCAACATTTTCAGAAAGTAGTACTTAATCGCTTGTAACTCTTCACTTCTGCTTCATTTTGGTCTCAGCCCATAGAAACGAGCATCTGGCTGCCTCGTTAACATTCTTCTGCAATGATCTAAAGACAAAAGAACCTCAAAGTGAGAAAAAGCGGAAAAAGGCACCGAAAAAGGAAGATAGAGATAGAGGTGTAGTGCATATCACCGATGTCTAG

mRNA sequence

ATGGAAACTGGGATGGAAGAAGAAGACTCCATGTCCGAACACTTGAGGGACCGATTCCGTCTCTCCACCATTTCCATCGCTGAAGCTGAAGCGAATAGAAGCGGCATGGAAATCTCTGAAACTGTGATGGCTTGTGTCGCTGAGTTAGCGTTCAAATATACAAATAACGGACTGGTAACTTGTGTAGCAGAACAGTTGGCAAAAGACCTTGAGTTATTTTCTCAGCATGGTGGTCGGAAAACTGTGAATACGGAAGACGTCATACTATCAGCCCATAGAAACGAGCATCTGGCTGCCTCGTTAACATTCTTCTGCAATGATCTAAAGACAAAAGAACCTCAAAGTGAGAAAAAGCGGAAAAAGGCACCGAAAAAGGAAGATAGAGATAGAGGTGTAGTGCATATCACCGATGTCTAG

Coding sequence (CDS)

ATGGAAACTGGGATGGAAGAAGAAGACTCCATGTCCGAACACTTGAGGGACCGATTCCGTCTCTCCACCATTTCCATCGCTGAAGCTGAAGCGAATAGAAGCGGCATGGAAATCTCTGAAACTGTGATGGCTTGTGTCGCTGAGTTAGCGTTCAAATATACAAATAACGGACTGGTAACTTGTGTAGCAGAACAGTTGGCAAAAGACCTTGAGTTATTTTCTCAGCATGGTGGTCGGAAAACTGTGAATACGGAAGACGTCATACTATCAGCCCATAGAAACGAGCATCTGGCTGCCTCGTTAACATTCTTCTGCAATGATCTAAAGACAAAAGAACCTCAAAGTGAGAAAAAGCGGAAAAAGGCACCGAAAAAGGAAGATAGAGATAGAGGTGTAGTGCATATCACCGATGTCTAG

Protein sequence

METGMEEEDSMSEHLRDRFRLSTISIAEAEANRSGMEISETVMACVAELAFKYTNNGLVTCVAEQLAKDLELFSQHGGRKTVNTEDVILSAHRNEHLAASLTFFCNDLKTKEPQSEKKRKKAPKKEDRDRGVVHITDV

Homology

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BLAST of Spg036921 vs. NCBI nr
Match: XP_011652290.1 (protein MHF1 homolog isoform X1 [Cucumis sativus] >XP_011652296.1 protein MHF1 homolog isoform X1 [Cucumis sativus])

HSP 1 Score: 206.1 bits (523), Expect = 2.0e-49
Identity = 109/137 (79.56%), Postives = 118/137 (86.13%), Query Frame = 0


Query: 1   METGMEEEDSMSEHLRDRFRLSTISIAEAEANRSGMEISETVMACVAELAFKYTNNGLVT 60
           METGMEE+DS SE LRDRFRLS+ISIAEAEAN+SGMEISE VM CVA+LAFKYT      
Sbjct: 1   METGMEEDDSASELLRDRFRLSSISIAEAEANKSGMEISEPVMTCVADLAFKYT------ 60

Query: 61  CVAEQLAKDLELFSQHGGRKTVNTEDVILSAHRNEHLAASLTFFCNDLKTKEPQSEKKRK 120
              EQLAKDLELF+QH GRK+VNTEDVIL+AHRNEHLAA LT  CNDLKTKEPQSE+KRK
Sbjct: 61  --TEQLAKDLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKTKEPQSERKRK 120

Query: 121 KAPKKEDRDRGVVHITD 138
           KAPKK+DRDRG VHI D
Sbjct: 121 KAPKKDDRDRGAVHIAD 129

[Close]

BLAST of Spg036921 vs. NCBI nr
Match: XP_004154006.1 (protein MHF1 homolog isoform X2 [Cucumis sativus] >XP_004154007.1 protein MHF1 homolog isoform X2 [Cucumis sativus] >KGN64440.1 hypothetical protein Csa_013391 [Cucumis sativus])

HSP 1 Score: 204.5 bits (519), Expect = 5.8e-49
Identity = 108/137 (78.83%), Postives = 118/137 (86.13%), Query Frame = 0


Query: 1   METGMEEEDSMSEHLRDRFRLSTISIAEAEANRSGMEISETVMACVAELAFKYTNNGLVT 60
           METGMEE+DS SE LRDRFRLS+ISIAEAEAN+SGMEISE VM CVA+LAFKYT      
Sbjct: 1   METGMEEDDSASELLRDRFRLSSISIAEAEANKSGMEISEPVMTCVADLAFKYT------ 60

Query: 61  CVAEQLAKDLELFSQHGGRKTVNTEDVILSAHRNEHLAASLTFFCNDLKTKEPQSEKKRK 120
              +QLAKDLELF+QH GRK+VNTEDVIL+AHRNEHLAA LT  CNDLKTKEPQSE+KRK
Sbjct: 61  ---KQLAKDLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKTKEPQSERKRK 120

Query: 121 KAPKKEDRDRGVVHITD 138
           KAPKK+DRDRG VHI D
Sbjct: 121 KAPKKDDRDRGAVHIAD 128

[Close]

BLAST of Spg036921 vs. NCBI nr
Match: XP_022137214.1 (protein MHF1 homolog [Momordica charantia] >XP_022137215.1 protein MHF1 homolog [Momordica charantia])

HSP 1 Score: 203.8 bits (517), Expect = 9.9e-49
Identity = 109/137 (79.56%), Postives = 117/137 (85.40%), Query Frame = 0


Query: 1   METGMEEEDSMSEHLRDRFRLSTISIAEAEANRSGMEISETVMACVAELAFKYTNNGLVT 60
           METG EE+D+ +E L DRFRLSTISIAEAEA R+GMEISE VM CVAELAFKYT      
Sbjct: 1   METGREEDDTATELLSDRFRLSTISIAEAEAKRNGMEISEPVMTCVAELAFKYT------ 60

Query: 61  CVAEQLAKDLELFSQHGGRKTVNTEDVILSAHRNEHLAASLTFFCNDLKTKEPQSEKKRK 120
              EQLAKDLELF+QH GRK+VNTEDVILSAHRNEHLAASLT FCNDLKTKEPQ+E+KRK
Sbjct: 61  --TEQLAKDLELFAQHAGRKSVNTEDVILSAHRNEHLAASLTSFCNDLKTKEPQTERKRK 120

Query: 121 KAPKKEDRDRGVVHITD 138
           KA KKEDRDRGVVHI D
Sbjct: 121 KASKKEDRDRGVVHIND 129

[Close]

BLAST of Spg036921 vs. NCBI nr
Match: XP_038894698.1 (protein MHF1 homolog isoform X1 [Benincasa hispida])

HSP 1 Score: 202.6 bits (514), Expect = 2.2e-48
Identity = 109/137 (79.56%), Postives = 116/137 (84.67%), Query Frame = 0


Query: 1   METGMEEEDSMSEHLRDRFRLSTISIAEAEANRSGMEISETVMACVAELAFKYTNNGLVT 60
           M+TG+EE+ S SE LRDRFRLSTISIAEAEANRSGMEISE VM CVA+LAFKYT      
Sbjct: 1   MKTGIEEDGSASELLRDRFRLSTISIAEAEANRSGMEISEPVMTCVADLAFKYT------ 60

Query: 61  CVAEQLAKDLELFSQHGGRKTVNTEDVILSAHRNEHLAASLTFFCNDLKTKEPQSEKKRK 120
              EQLAKDLELF QH GRK+VNTEDVILSAHRNEHL+A LT  CNDLKTKEPQSE+KRK
Sbjct: 61  --TEQLAKDLELFVQHAGRKSVNTEDVILSAHRNEHLSAILTSICNDLKTKEPQSERKRK 120

Query: 121 KAPKKEDRDRGVVHITD 138
           KAPKKEDRDRG VHI D
Sbjct: 121 KAPKKEDRDRGAVHIID 129

[Close]

BLAST of Spg036921 vs. NCBI nr
Match: XP_038894699.1 (protein MHF1 homolog isoform X2 [Benincasa hispida])

HSP 1 Score: 201.1 bits (510), Expect = 6.4e-48
Identity = 108/137 (78.83%), Postives = 116/137 (84.67%), Query Frame = 0


Query: 1   METGMEEEDSMSEHLRDRFRLSTISIAEAEANRSGMEISETVMACVAELAFKYTNNGLVT 60
           M+TG+EE+ S SE LRDRFRLSTISIAEAEANRSGMEISE VM CVA+LAFKYT      
Sbjct: 1   MKTGIEEDGSASELLRDRFRLSTISIAEAEANRSGMEISEPVMTCVADLAFKYT------ 60

Query: 61  CVAEQLAKDLELFSQHGGRKTVNTEDVILSAHRNEHLAASLTFFCNDLKTKEPQSEKKRK 120
              +QLAKDLELF QH GRK+VNTEDVILSAHRNEHL+A LT  CNDLKTKEPQSE+KRK
Sbjct: 61  ---KQLAKDLELFVQHAGRKSVNTEDVILSAHRNEHLSAILTSICNDLKTKEPQSERKRK 120

Query: 121 KAPKKEDRDRGVVHITD 138
           KAPKKEDRDRG VHI D
Sbjct: 121 KAPKKEDRDRGAVHIID 128

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BLAST of Spg036921 vs. ExPASy Swiss-Prot
Match: Q9FI55 (Protein MHF1 homolog OS=Arabidopsis thaliana OX=3702 GN=MHF1 PE=3 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 3.5e-33
Identity = 79/123 (64.23%), Postives = 95/123 (77.24%), Query Frame = 0


Query: 7   EEDSMSEHLRDRFRLSTISIAEAEANRSGMEISETVMACVAELAFKYTNNGLVTCVAEQL 66
           EE SM + +RDRFRLS ISIAEAEA ++GMEI   V+ACVA+LAFKY         AE +
Sbjct: 116 EEYSMDDLIRDRFRLSAISIAEAEAKKNGMEIGGPVVACVADLAFKY---------AENV 175

Query: 67  AKDLELFSQHGGRKTVNTEDVILSAHRNEHLAASLTFFCNDLKTKEPQSEKKRKK-APKK 126
           AKDLELF+ H GRK VN +DV+LSAHRN++LAASL   CN+LK KEPQSE+KRKK + KK
Sbjct: 176 AKDLELFAHHAGRKVVNMDDVVLSAHRNDNLAASLRSLCNELKAKEPQSERKRKKGSAKK 229

Query: 127 EDR 129
           ED+
Sbjct: 236 EDK 229

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BLAST of Spg036921 vs. ExPASy Swiss-Prot
Match: Q6NRI8 (Centromere protein S OS=Xenopus laevis OX=8355 GN=cenps PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.3e-06
Identity = 36/123 (29.27%), Postives = 63/123 (51.22%), Query Frame = 0


Query: 1   METGMEEEDSMSEHLRDRFRLSTISIAEAEANRSGMEISETVMACVAELAFKYTNNGLVT 60
           M  G EE  S ++ L+        S+ +  A+   ++ S+  +A ++E+ F+        
Sbjct: 1   MAEGQEEHFSRTQRLKAAVHYVVGSLCQEVADDKEIDFSKQAIAAISEITFRQ------- 60

Query: 61  CVAEQLAKDLELFSQHGGRKTVNTEDVILSAHRNEHLAASLTFFCNDLKTKE-PQSEKKR 120
              E  AKDLE+F++H  R T+N +DV L A R+  L A ++   +++      Q EKK+
Sbjct: 61  --CESFAKDLEIFARHAKRTTINMDDVKLLARRSRSLYAHISKCSDEIAANSLEQKEKKK 114

Query: 121 KKA 123
           KK+
Sbjct: 121 KKS 114

[Close]

BLAST of Spg036921 vs. ExPASy Swiss-Prot
Match: Q2TBR7 (Centromere protein S OS=Bos taurus OX=9913 GN=CENPS PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.7e-06
Identity = 44/137 (32.12%), Postives = 65/137 (47.45%), Query Frame = 0


Query: 5   MEEED--------SMSEHLRDRFRLSTISIAEAEANRSGMEISETVMACVAELAFKYTNN 64
           MEEE+        S  + L+     +   + E  A+   M+ S+  +A ++E+ F     
Sbjct: 1   MEEEEWSEEQQRFSYLQRLKAAVHYTVGCLCEEVASDKDMQFSKQTIAAISEVTFGQ--- 60

Query: 65  GLVTCVAEQLAKDLELFSQHGGRKTVNTEDVILSAHRNEHLAASLTFFCNDLKTKEPQSE 124
                  E  AKDLE+F++H  R T+NTEDV L A R+  L   +T    D+   +   E
Sbjct: 61  ------CENFAKDLEMFARHAKRSTINTEDVKLLARRSHSLLKYITEKNEDI--AQLNLE 120

Query: 125 KKRKKAPKKEDRDRGVV 134
           KK KK  K ED +R  V
Sbjct: 121 KKAKKKKKLEDENRNSV 126

[Close]

BLAST of Spg036921 vs. ExPASy Swiss-Prot
Match: E1BSW7 (Centromere protein S OS=Gallus gallus OX=9031 GN=CENPS PE=1 SV=2)

HSP 1 Score: 51.6 bits (122), Expect = 8.2e-06
Identity = 36/126 (28.57%), Postives = 64/126 (50.79%), Query Frame = 0


Query: 4   GMEEEDSMSEHLRDRFRLSTISIAEAEANRSGMEISETVMACVAELAFKYTNNGLVTCVA 63
           G E+ + + + LR     +T  + +  A   G+  S+  +A ++E+ F+           
Sbjct: 5   GGEQRELLIQRLRAAVHYTTGCLCQDVAEDKGVLFSKQTVAAISEITFRQ---------C 64

Query: 64  EQLAKDLELFSQHGGRKTVNTEDVILSAHRNEHLAASLTFFCNDLKTKE-PQSEKKRKKA 123
           E  A+DLE+F++H  R T+ +EDV L A R+  L   +T   ++L +    Q EKK+KK+
Sbjct: 65  ENFARDLEMFARHAKRSTITSEDVKLLARRSNSLLKYITQKSDELASSNMEQKEKKKKKS 121

Query: 124 PKKEDR 129
              + R
Sbjct: 125 SAAKGR 121

[Close]

BLAST of Spg036921 vs. ExPASy Swiss-Prot
Match: Q8N2Z9 (Centromere protein S OS=Homo sapiens OX=9606 GN=CENPS PE=1 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.4e-05
Identity = 38/126 (30.16%), Postives = 61/126 (48.41%), Query Frame = 0


Query: 2   ETGMEEEDSMSEHLRDRFRLSTISIAEAEANRSGMEISETVMACVAELAFKYTNNGLVTC 61
           ET  ++  S  + L+     +   + E  A    M+ S+  +A ++EL F+         
Sbjct: 6   ETEEQQRFSYQQRLKAAVHYTVGCLCEEVALDKEMQFSKQTIAAISELTFRQ-------- 65

Query: 62  VAEQLAKDLELFSQHGGRKTVNTEDVILSAHRNEHLAASLTFFCNDLKTKEPQSEKKRKK 121
             E  AKDLE+F++H  R T+NTEDV L A R+  L   +T    ++   +   E+K +K
Sbjct: 66  -CENFAKDLEMFARHAKRTTINTEDVKLLARRSNSLLKYITDKSEEI--AQINLERKAQK 120

Query: 122 APKKED 128
             K ED
Sbjct: 126 KKKSED 120

[Close]

BLAST of Spg036921 vs. ExPASy TrEMBL
Match: A0A0A0LR97 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G051770 PE=3 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 2.8e-49
Identity = 108/137 (78.83%), Postives = 118/137 (86.13%), Query Frame = 0


Query: 1   METGMEEEDSMSEHLRDRFRLSTISIAEAEANRSGMEISETVMACVAELAFKYTNNGLVT 60
           METGMEE+DS SE LRDRFRLS+ISIAEAEAN+SGMEISE VM CVA+LAFKYT      
Sbjct: 1   METGMEEDDSASELLRDRFRLSSISIAEAEANKSGMEISEPVMTCVADLAFKYT------ 60

Query: 61  CVAEQLAKDLELFSQHGGRKTVNTEDVILSAHRNEHLAASLTFFCNDLKTKEPQSEKKRK 120
              +QLAKDLELF+QH GRK+VNTEDVIL+AHRNEHLAA LT  CNDLKTKEPQSE+KRK
Sbjct: 61  ---KQLAKDLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKTKEPQSERKRK 120

Query: 121 KAPKKEDRDRGVVHITD 138
           KAPKK+DRDRG VHI D
Sbjct: 121 KAPKKDDRDRGAVHIAD 128

[Close]

BLAST of Spg036921 vs. ExPASy TrEMBL
Match: A0A6J1C623 (protein MHF1 homolog OS=Momordica charantia OX=3673 GN=LOC111008732 PE=3 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 4.8e-49
Identity = 109/137 (79.56%), Postives = 117/137 (85.40%), Query Frame = 0


Query: 1   METGMEEEDSMSEHLRDRFRLSTISIAEAEANRSGMEISETVMACVAELAFKYTNNGLVT 60
           METG EE+D+ +E L DRFRLSTISIAEAEA R+GMEISE VM CVAELAFKYT      
Sbjct: 1   METGREEDDTATELLSDRFRLSTISIAEAEAKRNGMEISEPVMTCVAELAFKYT------ 60

Query: 61  CVAEQLAKDLELFSQHGGRKTVNTEDVILSAHRNEHLAASLTFFCNDLKTKEPQSEKKRK 120
              EQLAKDLELF+QH GRK+VNTEDVILSAHRNEHLAASLT FCNDLKTKEPQ+E+KRK
Sbjct: 61  --TEQLAKDLELFAQHAGRKSVNTEDVILSAHRNEHLAASLTSFCNDLKTKEPQTERKRK 120

Query: 121 KAPKKEDRDRGVVHITD 138
           KA KKEDRDRGVVHI D
Sbjct: 121 KASKKEDRDRGVVHIND 129

[Close]

BLAST of Spg036921 vs. ExPASy TrEMBL
Match: A0A5A7UM53 (Centromere protein S isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G002010 PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 9.0e-48
Identity = 106/137 (77.37%), Postives = 116/137 (84.67%), Query Frame = 0


Query: 1   METGMEEEDSMSEHLRDRFRLSTISIAEAEANRSGMEISETVMACVAELAFKYTNNGLVT 60
           MET MEE+DS SE LRDRFRLSTISIAEAEAN+SGMEISE VM CVA+LAFK+T      
Sbjct: 1   METRMEEDDSASELLRDRFRLSTISIAEAEANKSGMEISEPVMTCVADLAFKFT------ 60

Query: 61  CVAEQLAKDLELFSQHGGRKTVNTEDVILSAHRNEHLAASLTFFCNDLKTKEPQSEKKRK 120
              EQLAKDLELF+QH GRK+VNTEDVIL+AHRNEHLAA LT  CNDLK KEPQSE+KRK
Sbjct: 61  --TEQLAKDLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKAKEPQSERKRK 120

Query: 121 KAPKKEDRDRGVVHITD 138
           KAPKK+DRDRG VHI +
Sbjct: 121 KAPKKDDRDRGAVHIAE 129

[Close]

BLAST of Spg036921 vs. ExPASy TrEMBL
Match: A0A1S3B159 (centromere protein S isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484694 PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 9.0e-48
Identity = 106/137 (77.37%), Postives = 116/137 (84.67%), Query Frame = 0


Query: 1   METGMEEEDSMSEHLRDRFRLSTISIAEAEANRSGMEISETVMACVAELAFKYTNNGLVT 60
           MET MEE+DS SE LRDRFRLSTISIAEAEAN+SGMEISE VM CVA+LAFK+T      
Sbjct: 1   METRMEEDDSASELLRDRFRLSTISIAEAEANKSGMEISEPVMTCVADLAFKFT------ 60

Query: 61  CVAEQLAKDLELFSQHGGRKTVNTEDVILSAHRNEHLAASLTFFCNDLKTKEPQSEKKRK 120
              EQLAKDLELF+QH GRK+VNTEDVIL+AHRNEHLAA LT  CNDLK KEPQSE+KRK
Sbjct: 61  --TEQLAKDLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKAKEPQSERKRK 120

Query: 121 KAPKKEDRDRGVVHITD 138
           KAPKK+DRDRG VHI +
Sbjct: 121 KAPKKDDRDRGAVHIAE 129

[Close]

BLAST of Spg036921 vs. ExPASy TrEMBL
Match: A0A5D3BHQ8 (Centromere protein S isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004950 PE=3 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 2.6e-47
Identity = 105/137 (76.64%), Postives = 116/137 (84.67%), Query Frame = 0


Query: 1   METGMEEEDSMSEHLRDRFRLSTISIAEAEANRSGMEISETVMACVAELAFKYTNNGLVT 60
           MET MEE+DS SE LRDRFRLSTISIAEAEAN+SGMEISE VM CVA+LAFK+T      
Sbjct: 1   METRMEEDDSASELLRDRFRLSTISIAEAEANKSGMEISEPVMTCVADLAFKFT------ 60

Query: 61  CVAEQLAKDLELFSQHGGRKTVNTEDVILSAHRNEHLAASLTFFCNDLKTKEPQSEKKRK 120
              +QLAKDLELF+QH GRK+VNTEDVIL+AHRNEHLAA LT  CNDLK KEPQSE+KRK
Sbjct: 61  ---KQLAKDLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKAKEPQSERKRK 120

Query: 121 KAPKKEDRDRGVVHITD 138
           KAPKK+DRDRG VHI +
Sbjct: 121 KAPKKDDRDRGAVHIAE 128

[Close]

BLAST of Spg036921 vs. TAIR 10
Match: AT5G50930.1 (Histone superfamily protein )

HSP 1 Score: 142.5 bits (358), Expect = 2.5e-34
Identity = 79/123 (64.23%), Postives = 95/123 (77.24%), Query Frame = 0


Query: 7   EEDSMSEHLRDRFRLSTISIAEAEANRSGMEISETVMACVAELAFKYTNNGLVTCVAEQL 66
           EE SM + +RDRFRLS ISIAEAEA ++GMEI   V+ACVA+LAFKY         AE +
Sbjct: 116 EEYSMDDLIRDRFRLSAISIAEAEAKKNGMEIGGPVVACVADLAFKY---------AENV 175

Query: 67  AKDLELFSQHGGRKTVNTEDVILSAHRNEHLAASLTFFCNDLKTKEPQSEKKRKK-APKK 126
           AKDLELF+ H GRK VN +DV+LSAHRN++LAASL   CN+LK KEPQSE+KRKK + KK
Sbjct: 176 AKDLELFAHHAGRKVVNMDDVVLSAHRNDNLAASLRSLCNELKAKEPQSERKRKKGSAKK 229

Query: 127 EDR 129
           ED+
Sbjct: 236 EDK 229

The following BLAST results are available for this feature:

BLAST of Spg036921 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011652290.1	2.0e-49	79.56	protein MHF1 homolog isoform X1 [Cucumis sativus] >XP_011652296.1 protein MHF1 h...	[more]
XP_004154006.1	5.8e-49	78.83	protein MHF1 homolog isoform X2 [Cucumis sativus] >XP_004154007.1 protein MHF1 h...	[more]
XP_022137214.1	9.9e-49	79.56	protein MHF1 homolog [Momordica charantia] >XP_022137215.1 protein MHF1 homolog ...	[more]
XP_038894698.1	2.2e-48	79.56	protein MHF1 homolog isoform X1 [Benincasa hispida]	[more]
XP_038894699.1	6.4e-48	78.83	protein MHF1 homolog isoform X2 [Benincasa hispida]	[more]

BLAST of Spg036921 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FI55	3.5e-33	64.23	Protein MHF1 homolog OS=Arabidopsis thaliana OX=3702 GN=MHF1 PE=3 SV=1	[more]
Q6NRI8	1.3e-06	29.27	Centromere protein S OS=Xenopus laevis OX=8355 GN=cenps PE=2 SV=1	[more]
Q2TBR7	1.7e-06	32.12	Centromere protein S OS=Bos taurus OX=9913 GN=CENPS PE=2 SV=1	[more]
E1BSW7	8.2e-06	28.57	Centromere protein S OS=Gallus gallus OX=9031 GN=CENPS PE=1 SV=2	[more]
Q8N2Z9	1.4e-05	30.16	Centromere protein S OS=Homo sapiens OX=9606 GN=CENPS PE=1 SV=1	[more]

BLAST of Spg036921 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LR97	2.8e-49	78.83	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G051770 PE=3 SV=1	[more]
A0A6J1C623	4.8e-49	79.56	protein MHF1 homolog OS=Momordica charantia OX=3673 GN=LOC111008732 PE=3 SV=1	[more]
A0A5A7UM53	9.0e-48	77.37	Centromere protein S isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A1S3B159	9.0e-48	77.37	centromere protein S isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484694 PE=3 SV=...	[more]
A0A5D3BHQ8	2.6e-47	76.64	Centromere protein S isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]

BLAST of Spg036921 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G50930.1	2.5e-34	64.23	Histone superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029003	CENP-S/Mhf1	PFAM	PF15630	CENP-S	coord: 14..97 e-value: 8.6E-16 score: 58.1
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 1..121 e-value: 1.0E-28 score: 101.8
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 57..96
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 111..138
None	No IPR available	PANTHER	PTHR22980:SF0	CENTROMERE PROTEIN S	coord: 5..129
None	No IPR available	PANTHER	PTHR22980	CORTISTATIN	coord: 5..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg036921.1	Spg036921.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007129	homologous chromosome pairing at meiosis
biological_process	GO:0036297	interstrand cross-link repair
biological_process	GO:0006312	mitotic recombination
biological_process	GO:0031297	replication fork processing
biological_process	GO:0000712	resolution of meiotic recombination intermediates
cellular_component	GO:0071821	FANCM-MHF complex
cellular_component	GO:0043240	Fanconi anaemia nuclear complex
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0046982	protein heterodimerization activity