Spg036921 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAGATCCCTATATAACGGTATGCAGCCAAGTTTTGTTCTTAAAATATTCAACTAGAAATGGAGAAATTTTTCTTATTTTCTACGTTTTTGAGAATTCTAGTAAAACCAACCCAATAAATAACACAAAATTCCCCAAAAAAGGAAAAGAAAAAAGAAAAAATTGAAACGGTTCGTTTAAGGCCATTTCCCGTCGCCAGCGACCAGTGCCAATTCTGGAGGAAATAAAGGCGGATTGAAACAGGTGCAGTCAAAAGTAGTAAAATCTGTGTCCAGAAGGCTCTGCAATGGAAACTGGGATGGAAGAAGAAGACTCCATGTCCGAACACTTGAGGGACCGATTCCGTCTCTCCACCATTTCCATCGCTGAAGCTGAAGGTCAATTATCTTCTTATTCTCTTCATTTCCAAGCCTGTCTGGTTTTAGAATCGACAGGAGAAAGAGAAAGTATTATCCTCCGATTACTGAATTCCATGCCTGGGCGAACTTTTCATATTTGTGTTGACTTGCTCTATTTTTGAACTGTTTGGTTTGTTTTGCAGCGAATAGAAGCGGCATGGAAATCTCTGAAACTGTGATGGCTTGTGTCGCTGAGTTAGCGTTCAAATATACAAGTCAGTTTACTTCCGTTTTAGGACAGTTTTGAGACTGCAGTATCATTTTGAGCACTTGGCTTCTACTTAACTATACTCTGAAAAATATATAGATCACTGAATTGCTAATTCCACTCTTTGTTAGACTTACATTCCGCATTGTGTAGATAACCTAATTGCTAATTTTTTTAATATCCCTTCTCTTCTAGCTGTGTTTCCATCATTTTTAGGTGGTTTATATGTAGTTTCAGTTTGAAATTTCCTTATTATTTAGCATGCATTCGGTTTGTTGGGATGCCTCTCTGTGCTTTGTAGTTAAATTGTGTGAACTGTGACCTAGTTGGAAGGAAACTACATAACTTTGGTCAAGTTTAAGTCAGGAAAATAGTTGCGAGAAGAACAAATGGAGTGACTATTGTGATATCTTAGAGAATGACATTGCATGACACTTTTGGGTTCTAATCAGATGTCCTTAGAGTTCATATCAATGTTCTTTTAGAACGAGGGACAAAAAAGATCTCCTTCATTCTAACTTGAGGCTTACACCTTACAGTGTGTTAGGCCTTAACCTCATCATGCTCTTGTGGGAGCATATGCCTCAGATAGAAGAGGTGTAAGACTCTTATGAACCAAAAGTGGTGTAATCTTGAGACTTAGATTTTGTGCTTCACCTCAAGGTATACCATGGGAAGGAGAGTTCTACTTGTCTTGTGTTTCTTTGTTTATATGTCAATCTCGTAAAGAAGACATAGTTATTATTTTAATTTATATATATATATATTAGCTTCAAGTCTGTTTTCTTCTACTGATGAGTACATTTTCCATTGTCTAAAAGAAGTATATTTATACCTATATCATATTGCATGAAATTAATGTATTCTTTCATCATACGCATGAATGATTTGGTAGGTTTAAAAGGTTTCAACCAGACCTTGAGTTCATACCGTGGTGTAGGGTCATGCTTATGTTTGTAGTCATAGGGCTAACATATGAACTACAAATGGTATAATTTATGCAATGAAAACATAGTTTTGTTTACTCTGCTGCTGTAGTTGCATCTCAGGCAGCAAGGAAAGAAGATAATTCAGTCATATGTCTGTTTGATTTTTTTTATGATTCTTGAAGCGTGCAATGAGATAACGGACTGGTAACTTGTGTAGCAGAACAGTTGGCAAAAGACCTTGAGTTATTTTCTCAGCATGGTGGTCGGAAAACTGTGAATACGGAAGACGTCATACTATCAGGTTAGATTATCCGATTCCCAAGTTTGCCTGTGCTGTAATATATATGTTGATCTCAGCTCGCACTATAATTTTTTGTTTGTTTTGCTGTATTACTGTCTAGTTATATTTAGTCAATATGCAGCAACATTTTCAGAAAGTAGTACTTAATCGCTTGTAACTCTTCACTTCTGCTTCATTTTGGTCTCAGCCCATAGAAACGAGCATCTGGCTGCCTCGTTAACATTCTTCTGCAATGATCTAAAGACAAAAGAACCTCAAAGTGAGAAAAAGCGGAAAAAGGCACCGAAAAAGGAAGATAGAGATAGAGGTGTAGTGCATATCACCGATGTCTAG ATGGAAACTGGGATGGAAGAAGAAGACTCCATGTCCGAACACTTGAGGGACCGATTCCGTCTCTCCACCATTTCCATCGCTGAAGCTGAAGCGAATAGAAGCGGCATGGAAATCTCTGAAACTGTGATGGCTTGTGTCGCTGAGTTAGCGTTCAAATATACAAATAACGGACTGGTAACTTGTGTAGCAGAACAGTTGGCAAAAGACCTTGAGTTATTTTCTCAGCATGGTGGTCGGAAAACTGTGAATACGGAAGACGTCATACTATCAGCCCATAGAAACGAGCATCTGGCTGCCTCGTTAACATTCTTCTGCAATGATCTAAAGACAAAAGAACCTCAAAGTGAGAAAAAGCGGAAAAAGGCACCGAAAAAGGAAGATAGAGATAGAGGTGTAGTGCATATCACCGATGTCTAG ATGGAAACTGGGATGGAAGAAGAAGACTCCATGTCCGAACACTTGAGGGACCGATTCCGTCTCTCCACCATTTCCATCGCTGAAGCTGAAGCGAATAGAAGCGGCATGGAAATCTCTGAAACTGTGATGGCTTGTGTCGCTGAGTTAGCGTTCAAATATACAAATAACGGACTGGTAACTTGTGTAGCAGAACAGTTGGCAAAAGACCTTGAGTTATTTTCTCAGCATGGTGGTCGGAAAACTGTGAATACGGAAGACGTCATACTATCAGCCCATAGAAACGAGCATCTGGCTGCCTCGTTAACATTCTTCTGCAATGATCTAAAGACAAAAGAACCTCAAAGTGAGAAAAAGCGGAAAAAGGCACCGAAAAAGGAAGATAGAGATAGAGGTGTAGTGCATATCACCGATGTCTAG METGMEEEDSMSEHLRDRFRLSTISIAEAEANRSGMEISETVMACVAELAFKYTNNGLVTCVAEQLAKDLELFSQHGGRKTVNTEDVILSAHRNEHLAASLTFFCNDLKTKEPQSEKKRKKAPKKEDRDRGVVHITDV Homology
BLAST of Spg036921 vs. NCBI nr
Match: XP_011652290.1 (protein MHF1 homolog isoform X1 [Cucumis sativus] >XP_011652296.1 protein MHF1 homolog isoform X1 [Cucumis sativus]) HSP 1 Score: 206.1 bits (523), Expect = 2.0e-49 Identity = 109/137 (79.56%), Postives = 118/137 (86.13%), Query Frame = 0
BLAST of Spg036921 vs. NCBI nr
Match: XP_004154006.1 (protein MHF1 homolog isoform X2 [Cucumis sativus] >XP_004154007.1 protein MHF1 homolog isoform X2 [Cucumis sativus] >KGN64440.1 hypothetical protein Csa_013391 [Cucumis sativus]) HSP 1 Score: 204.5 bits (519), Expect = 5.8e-49 Identity = 108/137 (78.83%), Postives = 118/137 (86.13%), Query Frame = 0
BLAST of Spg036921 vs. NCBI nr
Match: XP_022137214.1 (protein MHF1 homolog [Momordica charantia] >XP_022137215.1 protein MHF1 homolog [Momordica charantia]) HSP 1 Score: 203.8 bits (517), Expect = 9.9e-49 Identity = 109/137 (79.56%), Postives = 117/137 (85.40%), Query Frame = 0
BLAST of Spg036921 vs. NCBI nr
Match: XP_038894698.1 (protein MHF1 homolog isoform X1 [Benincasa hispida]) HSP 1 Score: 202.6 bits (514), Expect = 2.2e-48 Identity = 109/137 (79.56%), Postives = 116/137 (84.67%), Query Frame = 0
BLAST of Spg036921 vs. NCBI nr
Match: XP_038894699.1 (protein MHF1 homolog isoform X2 [Benincasa hispida]) HSP 1 Score: 201.1 bits (510), Expect = 6.4e-48 Identity = 108/137 (78.83%), Postives = 116/137 (84.67%), Query Frame = 0
BLAST of Spg036921 vs. ExPASy Swiss-Prot
Match: Q9FI55 (Protein MHF1 homolog OS=Arabidopsis thaliana OX=3702 GN=MHF1 PE=3 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 3.5e-33 Identity = 79/123 (64.23%), Postives = 95/123 (77.24%), Query Frame = 0
BLAST of Spg036921 vs. ExPASy Swiss-Prot
Match: Q6NRI8 (Centromere protein S OS=Xenopus laevis OX=8355 GN=cenps PE=2 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 1.3e-06 Identity = 36/123 (29.27%), Postives = 63/123 (51.22%), Query Frame = 0
BLAST of Spg036921 vs. ExPASy Swiss-Prot
Match: Q2TBR7 (Centromere protein S OS=Bos taurus OX=9913 GN=CENPS PE=2 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 1.7e-06 Identity = 44/137 (32.12%), Postives = 65/137 (47.45%), Query Frame = 0
BLAST of Spg036921 vs. ExPASy Swiss-Prot
Match: E1BSW7 (Centromere protein S OS=Gallus gallus OX=9031 GN=CENPS PE=1 SV=2) HSP 1 Score: 51.6 bits (122), Expect = 8.2e-06 Identity = 36/126 (28.57%), Postives = 64/126 (50.79%), Query Frame = 0
BLAST of Spg036921 vs. ExPASy Swiss-Prot
Match: Q8N2Z9 (Centromere protein S OS=Homo sapiens OX=9606 GN=CENPS PE=1 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 1.4e-05 Identity = 38/126 (30.16%), Postives = 61/126 (48.41%), Query Frame = 0
BLAST of Spg036921 vs. ExPASy TrEMBL
Match: A0A0A0LR97 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G051770 PE=3 SV=1) HSP 1 Score: 204.5 bits (519), Expect = 2.8e-49 Identity = 108/137 (78.83%), Postives = 118/137 (86.13%), Query Frame = 0
BLAST of Spg036921 vs. ExPASy TrEMBL
Match: A0A6J1C623 (protein MHF1 homolog OS=Momordica charantia OX=3673 GN=LOC111008732 PE=3 SV=1) HSP 1 Score: 203.8 bits (517), Expect = 4.8e-49 Identity = 109/137 (79.56%), Postives = 117/137 (85.40%), Query Frame = 0
BLAST of Spg036921 vs. ExPASy TrEMBL
Match: A0A5A7UM53 (Centromere protein S isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G002010 PE=3 SV=1) HSP 1 Score: 199.5 bits (506), Expect = 9.0e-48 Identity = 106/137 (77.37%), Postives = 116/137 (84.67%), Query Frame = 0
BLAST of Spg036921 vs. ExPASy TrEMBL
Match: A0A1S3B159 (centromere protein S isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484694 PE=3 SV=1) HSP 1 Score: 199.5 bits (506), Expect = 9.0e-48 Identity = 106/137 (77.37%), Postives = 116/137 (84.67%), Query Frame = 0
BLAST of Spg036921 vs. ExPASy TrEMBL
Match: A0A5D3BHQ8 (Centromere protein S isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004950 PE=3 SV=1) HSP 1 Score: 198.0 bits (502), Expect = 2.6e-47 Identity = 105/137 (76.64%), Postives = 116/137 (84.67%), Query Frame = 0
BLAST of Spg036921 vs. TAIR 10
Match: AT5G50930.1 (Histone superfamily protein ) HSP 1 Score: 142.5 bits (358), Expect = 2.5e-34 Identity = 79/123 (64.23%), Postives = 95/123 (77.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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