Spg036149 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg036149
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Down syndrome critical region protein 3 homolog isoform X1
Location	scaffold5: 46566616 .. 46569857 (-)
RNA-Seq Expression	Spg036149
Synteny	Spg036149

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCGCGGTTGCAATGCCAGTAGAGCTCAGGCTTTCTCGAACTAATCGAATCTACCGGCCTTCTGTAAGCCTTCTCTTTCCATCTTCAATTCTCCTTATCATCATTCCACTCATCGATTTCTCTCGCTCTTGCAATGTTCAGGAACATCTTCAAGGCCAAATCATCGTCAATTCTCGTTCCTCGATTTCCCACAGTGGAATTCGCCTCGCCGTCAATGGATCCGTCAATTTGCAGGTTCAATACTCTTTTGTTTTGTTTTGTTTTGCTTTGTTTCTTCAAAAATAGTTGCGTACTATGTATTTCAATCAAGTACTATCTGAGCTACCGAACACCTGTTAAGCAACAGAGTTGTACACGGAGGGTTATTGCTTTACCTGTAATTTTAACTCTGTTCTTTTTCTTCTTCCGTTGGATGCATTTTATGGTAAAAAGGTTCGTGGAGGTTCTGCCGGAGTTATTGAGTCGGTTTACGGTGTCATCAAGCCTATTTCGATAGTGTGAGTTGGCTTTCTTTACGATTTTTAAGTGAATTGTGTATTCTGTAGACATAGTAGTTATATGACTTTAGTTGCAAATTCATTTCCGACTTTTGAAGATGACAGCAATCTCTTTATTGTCTACATAATTGCCGATCACAAAAGTAGAAGTTTTCTTTCGTACTTGTTGTGACTTTTGAATAATACAAAATGAAATCAACTAGGATATGGTTAGGGATTGGGGAATTTAATGCTTCCACTAGTGATAACTATTACTGAGCTTCTCTTACTGTCTCCGACCTGAAATTTATATTGGACATGGTTCGCACATCGTTTTATAAACGAGATCAGTTATAGTTTATCCGACTTTTCTATTGATTTTGTTTCCTTCGCCCTCATAATGATAGGAATAGGACCATTGAGGTAAGGCCATCTGGAAAGCTTGCTTCAGGTACAACTGAGGTATAATTGCTGTTGAAAGCTATAAAATTTTAGATTTTTATATGAATCAATGTTATGAATGTTTATTCACTTAGATTGTTCAATTAAATTTGCTCAAATATTTAACTTCCTTATTAAATGATTGCATGTTTTGTATATGGTTATTTTGTGTGGTTGTACCCTTACGGCATGTCATATCTTCTTGACCCTGGATAACAGCCTCTTATGAATGGTGCATGTTGGAGTCGGATATCTTGTGTATTTATATAGTTGCTTGCTTATTTGTTGCCCGAACTTTCAGATGGTTAACTGAACTGATTCCCTCAAAATCTTTCCAGATTCCATTTTCCATAATTCTGAGACAGCCAAGTGAAAACTTCGGAAGATTTTATGAGACTTTTCATGGAACTGACATTAACATTCAGGTGAGTGTTGTGAATCTTTCTACTTTGCGTTTGACTATTCAGACTATGTGTAAATGATTTGGTGTTTTAGTTTTCACTCTTATTCACCTTCCCACTCCAAAAAGAAACGAGATTTCTCTTAACATGAACCTGATATTTTGTCAATTACTGAATAATACGATAGTATTTAGTAACTGTAGATATAAGTAGAGGATACCTACACAAGTCGTTATCTGCCACGATGGAGTTTATAGTTGAAAGTGATACAGGTATGATGTATTTGACACTTCAACATTATATATTTAACACAAGTAAATGAAAATAATTGTTTTTCTTTTGTTCTGTTCCTAGCTGATTTTCTTGAGCGGCCATTGTCGTCTGAGATGGTTATCTTTTACATCACTCAGGATACACAAAGGCATCCACTACTTCCTGAACTAAAATCAGGTTTTCATCATTGTTCCTTTTCTTTCATGTTTTATCTCTTTCAGGTGTGATTTATTTTATTCATTGTCATATGGGAATATTTGCATATAAGCCATCTATGGTAGCATATAGAAGAAGTAAACCATTGCTTATTTATTTTCTATTTTGTTTTATCTTTTTATATTTCAGTATCCTTTTGCTGATGAGAGATACTTCTAAATAGGTGGTTTTCGAGTGACTGGGAAAATGTCAACTCTGTGCTCTCTTTCAGATCCCATCACTGGTGAATTAATAGTTGAAGCATCAACAGTTCCCATTAATTCAATTGACATTCACTTGTGTCGTGTGGAATCAGTCATTCTTGGGGAGAGAATCATAACTGAAACATCTGTGATCCAAACTACCCAGGTATGAGACATCTCATCTTCTCTGTGTATATTAGTTTTTGCCTATACAAAAATTCATATAAAATTCGGATTTCTTTTTATTTTATCACCAGATAGCAGATGGAGATGTCTGTCGCAACATTACTCTGCCTATTTATGCTATACTACCCCGCCTTTTAACTTCCCCAACAGTCTTTGCTGGGTGAGTTACAAATACTATTACTGTTATACTACATTTTCAATCAAATACTATAATTGTGTGATGGGAAGTGAGGACACGCATGGAACCAAATATAGAAACCCACGCTATGTGAGACATCAAACGTCTGAAATAAGCACTTCATGATGCCACGTTCAGCTATTGGACTGGGATTTCTAAAGCATATGTACTAAATTAAGTTCGGCCTTTTCATTTCCCCATATGATTGTAAATTTGCAATGAATGTAATATTGTGTGTCGAATAATTTTATTTCGTTGATGATTGGAAACAACTTTGGTAATTTGTTCCTTCGAAGTTCTCTCTGTGATTGGTATCAGATCTTGTTGAAATGCGGTTTATCAGTTAATGGCGTGTCCACTTGTTTATTCCCTGTCATTCTCATCTGTGACTTGGCATTTGTATTCAGCAAATAACTTGTCCTGATTGTTTTTGACAGTCCATTTTCAATTGAATTCATAGTCTACATCGTTATAACCTTTCAGTCAGAGCTATCAAAATTACATCCCAAGACTGATCCAAGAACTCCAAGACTATGGGTGAGCATCTCTCTCTCGATCGGGTTGTATGAACTTTCTCTTGTTTAACCAATCTAACTTGTTCTCTTGTTTTCAATTCCAGCTTGCAATTGAATCTCTACCCCTTGAGCTTCTTCGAACTCATTGAGACGATTAGTTCAGCAGATCATTATACTGTATTTTGTTTGTCCTCTTGTGGATGATGTAAAATAAATCATATTGTACCTTCATCTTTTGGGTTCTGATTCTGGTTTTTCTTGGAGTGGGGGTTAATGGTCGGTGTAAAGTACCATGTTCAAGACCTAGTTTATGCTGATAATACTATGGTGTTATGTAGATTTTTTCCCCCTTTTTGTATATTTTTTCAGTATAT

mRNA sequence

TTCGCGGTTGCAATGCCAGTAGAGCTCAGGCTTTCTCGAACTAATCGAATCTACCGGCCTTCTGTAAGCCTTCTCTTTCCATCTTCAATTCTCCTTATCATCATTCCACTCATCGATTTCTCTCGCTCTTGCAATGTTCAGGAACATCTTCAAGGCCAAATCATCGTCAATTCTCGTTCCTCGATTTCCCACAGTGGAATTCGCCTCGCCGTCAATGGATCCGTCAATTTGCAGGTTCGTGGAGGTTCTGCCGGAGTTATTGAGTCGGTTTACGGTGTCATCAAGCCTATTTCGATAGTGAATAGGACCATTGAGGTAAGGCCATCTGGAAAGCTTGCTTCAGGTACAACTGAGATTCCATTTTCCATAATTCTGAGACAGCCAAGTGAAAACTTCGGAAGATTTTATGAGACTTTTCATGGAACTGACATTAACATTCAGGTGAGTGTTGTGAATCTTTCTACTTTGCGTTTGACTATTCAGACTATGTTAAATGAAAATAATTGTTTTTCTTTTGTTCTGTTCCTAGCTGATTTTCTTGAGCGGCCATTGTCGTCTGAGATGGTTATCTTTTACATCACTCAGGATACACAAAGGCATCCACTACTTCCTGAACTAAAATCAGGTGGTTTTCGAGTGACTGGGAAAATGTCAACTCTGTGCTCTCTTTCAGATCCCATCACTGGTGAATTAATAGTTGAAGCATCAACAGTTCCCATTAATTCAATTGACATTCACTTGTGTCGTGTGGAATCAGTCATTCTTGGGGAGAGAATCATAACTGAAACATCTGTGATCCAAACTACCCAGATAGCAGATGGAGATGTCTGTCGCAACATTACTCTGCCTATTTATGCTATACTACCCCGCCTTTTAACTTCCCCAACAGTCTTTGCTGGCTTGCAATTGAATCTCTACCCCTTGAGCTTCTTCGAACTCATTGAGACGATTAGTTCAGCAGATCATTATACTGTATTTTGTTTGTCCTCTTGTGGATGA

Coding sequence (CDS)

TTCGCGGTTGCAATGCCAGTAGAGCTCAGGCTTTCTCGAACTAATCGAATCTACCGGCCTTCTGTAAGCCTTCTCTTTCCATCTTCAATTCTCCTTATCATCATTCCACTCATCGATTTCTCTCGCTCTTGCAATGTTCAGGAACATCTTCAAGGCCAAATCATCGTCAATTCTCGTTCCTCGATTTCCCACAGTGGAATTCGCCTCGCCGTCAATGGATCCGTCAATTTGCAGGTTCGTGGAGGTTCTGCCGGAGTTATTGAGTCGGTTTACGGTGTCATCAAGCCTATTTCGATAGTGAATAGGACCATTGAGGTAAGGCCATCTGGAAAGCTTGCTTCAGGTACAACTGAGATTCCATTTTCCATAATTCTGAGACAGCCAAGTGAAAACTTCGGAAGATTTTATGAGACTTTTCATGGAACTGACATTAACATTCAGGTGAGTGTTGTGAATCTTTCTACTTTGCGTTTGACTATTCAGACTATGTTAAATGAAAATAATTGTTTTTCTTTTGTTCTGTTCCTAGCTGATTTTCTTGAGCGGCCATTGTCGTCTGAGATGGTTATCTTTTACATCACTCAGGATACACAAAGGCATCCACTACTTCCTGAACTAAAATCAGGTGGTTTTCGAGTGACTGGGAAAATGTCAACTCTGTGCTCTCTTTCAGATCCCATCACTGGTGAATTAATAGTTGAAGCATCAACAGTTCCCATTAATTCAATTGACATTCACTTGTGTCGTGTGGAATCAGTCATTCTTGGGGAGAGAATCATAACTGAAACATCTGTGATCCAAACTACCCAGATAGCAGATGGAGATGTCTGTCGCAACATTACTCTGCCTATTTATGCTATACTACCCCGCCTTTTAACTTCCCCAACAGTCTTTGCTGGCTTGCAATTGAATCTCTACCCCTTGAGCTTCTTCGAACTCATTGAGACGATTAGTTCAGCAGATCATTATACTGTATTTTGTTTGTCCTCTTGTGGATGA

Protein sequence

FAVAMPVELRLSRTNRIYRPSVSLLFPSSILLIIIPLIDFSRSCNVQEHLQGQIIVNSRSSISHSGIRLAVNGSVNLQVRGGSAGVIESVYGVIKPISIVNRTIEVRPSGKLASGTTEIPFSIILRQPSENFGRFYETFHGTDINIQVSVVNLSTLRLTIQTMLNENNCFSFVLFLADFLERPLSSEMVIFYITQDTQRHPLLPELKSGGFRVTGKMSTLCSLSDPITGELIVEASTVPINSIDIHLCRVESVILGERIITETSVIQTTQIADGDVCRNITLPIYAILPRLLTSPTVFAGLQLNLYPLSFFELIETISSADHYTVFCLSSCG

Homology

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BLAST of Spg036149 vs. NCBI nr
Match: XP_038895697.1 (vacuolar protein sorting-associated protein 26C isoform X1 [Benincasa hispida])

HSP 1 Score: 417.5 bits (1072), Expect = 1.0e-112
Identity = 231/311 (74.28%), Postives = 247/311 (79.42%), Query Frame = 0


Query: 5   MPVELRLSRTNRIYRPSVSLLFPSSILLIIIPLIDFSRSCNVQEHLQGQIIVNSRSSISH 64
           MPVEL+LSRTNRIYRPS                          EHLQG IIVNSRSSISH
Sbjct: 1   MPVELKLSRTNRIYRPS--------------------------EHLQGHIIVNSRSSISH 60

Query: 65  SGIRLAVNGSVNLQVRGGSAGVIESVYGVIKPISIVNRTIEVRPSGKLASGTTEIPFSII 124
           SGIRLA+NGSVNLQVRGGSAGVIESVYGVIKPI+IVNR +EVRPSGKLASGTTEIPFS+I
Sbjct: 61  SGIRLALNGSVNLQVRGGSAGVIESVYGVIKPIAIVNRIVEVRPSGKLASGTTEIPFSVI 120

Query: 125 LRQPSENFGRFYETFHGTDINIQVSVVNLSTLRLTIQTMLNENNCFSFVLFLADFLERPL 184
           LRQP+E  G+FYETFHGTDINIQ  +V +   R  +   L+    F      ADF+ERPL
Sbjct: 121 LRQPNEILGKFYETFHGTDINIQY-LVTVDISRGYLHKSLSATIEFIVESDTADFVERPL 180

Query: 185 SSEMVIFYITQDTQRHPLLPELKSGGFRVTGKMSTLCSLSDPITGELIVEASTVPINSID 244
           SSEMVIFYITQDTQRHPLLPELKSGGFRVTGKMSTLCSLSDPITGELIVE S VPINSID
Sbjct: 181 SSEMVIFYITQDTQRHPLLPELKSGGFRVTGKMSTLCSLSDPITGELIVETSAVPINSID 240

Query: 245 IHLCRVESVILGERIITETSVIQTTQIADGDVCRNITLPIYAILPRLLTSPTVFAG---L 304
           IHLCRVESVILGERIITETSVIQTTQIADGDVCR ITLPIY ILPRLLT PTVFAG   +
Sbjct: 241 IHLCRVESVILGERIITETSVIQTTQIADGDVCRKITLPIYVILPRLLTCPTVFAGPFSI 284

Query: 305 QLNLYPLSFFE 313
           +  +Y +  FE
Sbjct: 301 EFKVYIVITFE 284

[Close]

BLAST of Spg036149 vs. NCBI nr
Match: XP_022924207.1 (Down syndrome critical region protein 3 homolog isoform X1 [Cucurbita moschata] >XP_023520407.1 Down syndrome critical region protein 3 homolog isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 415.6 bits (1067), Expect = 4.0e-112
Identity = 228/296 (77.03%), Postives = 240/296 (81.08%), Query Frame = 0


Query: 5   MPVELRLSRTNRIYRPSVSLLFPSSILLIIIPLIDFSRSCNVQEHLQGQIIVNSRSSISH 64
           M VE+RLSRTNRIYRPS                          EHLQGQIIVNSRSSISH
Sbjct: 1   MAVEIRLSRTNRIYRPS--------------------------EHLQGQIIVNSRSSISH 60

Query: 65  SGIRLAVNGSVNLQVRGGSAGVIESVYGVIKPISIVNRTIEVRPSGKLASGTTEIPFSII 124
            GI L +NGSVNLQVRGGSAGVIESVYGVIKP+SIVNR+IEVRPSGKL SGTTEIPFS+I
Sbjct: 61  YGISLLLNGSVNLQVRGGSAGVIESVYGVIKPLSIVNRSIEVRPSGKLPSGTTEIPFSVI 120

Query: 125 LRQPSENFGRFYETFHGTDINIQVSVVNLSTLRLTIQTMLNENNCFSFVLFLADFLERPL 184
           LRQPSEN G+FYETFHGTDINIQ  +V +   R  +   L+    F      ADFLERPL
Sbjct: 121 LRQPSENLGKFYETFHGTDINIQY-LVTVGISRGYLHKSLSATIEFIVESDTADFLERPL 180

Query: 185 SSEMVIFYITQDTQRHPLLPELKSGGFRVTGKMSTLCSLSDPITGELIVEASTVPINSID 244
           SSEMVIFYITQDTQRHPLLPELKSGGFRVTGKM+TLCSLSDPITGEL VEAS VPI+SID
Sbjct: 181 SSEMVIFYITQDTQRHPLLPELKSGGFRVTGKMATLCSLSDPITGELTVEASAVPISSID 240

Query: 245 IHLCRVESVILGERIITETSVIQTTQIADGDVCRNITLPIYAILPRLLTSPTVFAG 301
           IHLCRVESVILGERIITETSVIQTTQIADGDVCRNITLPIYAILPRLLT PTVFAG
Sbjct: 241 IHLCRVESVILGERIITETSVIQTTQIADGDVCRNITLPIYAILPRLLTCPTVFAG 269

[Close]

BLAST of Spg036149 vs. NCBI nr
Match: XP_022924208.1 (Down syndrome critical region protein 3 homolog isoform X2 [Cucurbita moschata] >XP_023520408.1 Down syndrome critical region protein 3 homolog isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 415.6 bits (1067), Expect = 4.0e-112
Identity = 228/296 (77.03%), Postives = 240/296 (81.08%), Query Frame = 0


Query: 5   MPVELRLSRTNRIYRPSVSLLFPSSILLIIIPLIDFSRSCNVQEHLQGQIIVNSRSSISH 64
           M VE+RLSRTNRIYRPS                          EHLQGQIIVNSRSSISH
Sbjct: 1   MAVEIRLSRTNRIYRPS--------------------------EHLQGQIIVNSRSSISH 60

Query: 65  SGIRLAVNGSVNLQVRGGSAGVIESVYGVIKPISIVNRTIEVRPSGKLASGTTEIPFSII 124
            GI L +NGSVNLQVRGGSAGVIESVYGVIKP+SIVNR+IEVRPSGKL SGTTEIPFS+I
Sbjct: 61  YGISLLLNGSVNLQVRGGSAGVIESVYGVIKPLSIVNRSIEVRPSGKLPSGTTEIPFSVI 120

Query: 125 LRQPSENFGRFYETFHGTDINIQVSVVNLSTLRLTIQTMLNENNCFSFVLFLADFLERPL 184
           LRQPSEN G+FYETFHGTDINIQ  +V +   R  +   L+    F      ADFLERPL
Sbjct: 121 LRQPSENLGKFYETFHGTDINIQY-LVTVGISRGYLHKSLSATIEFIVESDTADFLERPL 180

Query: 185 SSEMVIFYITQDTQRHPLLPELKSGGFRVTGKMSTLCSLSDPITGELIVEASTVPINSID 244
           SSEMVIFYITQDTQRHPLLPELKSGGFRVTGKM+TLCSLSDPITGEL VEAS VPI+SID
Sbjct: 181 SSEMVIFYITQDTQRHPLLPELKSGGFRVTGKMATLCSLSDPITGELTVEASAVPISSID 240

Query: 245 IHLCRVESVILGERIITETSVIQTTQIADGDVCRNITLPIYAILPRLLTSPTVFAG 301
           IHLCRVESVILGERIITETSVIQTTQIADGDVCRNITLPIYAILPRLLT PTVFAG
Sbjct: 241 IHLCRVESVILGERIITETSVIQTTQIADGDVCRNITLPIYAILPRLLTCPTVFAG 269

[Close]

BLAST of Spg036149 vs. NCBI nr
Match: XP_022137704.1 (Down syndrome critical region protein 3 homolog isoform X1 [Momordica charantia])

HSP 1 Score: 414.1 bits (1063), Expect = 1.2e-111
Identity = 229/296 (77.36%), Postives = 238/296 (80.41%), Query Frame = 0


Query: 5   MPVELRLSRTNRIYRPSVSLLFPSSILLIIIPLIDFSRSCNVQEHLQGQIIVNSRSSISH 64
           MPVELRLSRTNRIYRPS                          EHLQGQIIVNS SSISH
Sbjct: 1   MPVELRLSRTNRIYRPS--------------------------EHLQGQIIVNSPSSISH 60

Query: 65  SGIRLAVNGSVNLQVRGGSAGVIESVYGVIKPISIVNRTIEVRPSGKLASGTTEIPFSII 124
           SGIRLAVNGSVNLQ+RGGSAGVIESVYGVIKP  IVN++IEVRPSGKLASGTTEIPFSII
Sbjct: 61  SGIRLAVNGSVNLQIRGGSAGVIESVYGVIKPTPIVNKSIEVRPSGKLASGTTEIPFSII 120

Query: 125 LRQPSENFGRFYETFHGTDINIQVSVVNLSTLRLTIQTMLNENNCFSFVLFLADFLERPL 184
           LRQPSE  GRFYETFHGT+INIQ  +V +   R  +   L+    F      AD LERPL
Sbjct: 121 LRQPSETLGRFYETFHGTNINIQY-LVTVDISRGYLHKSLSATIEFIVESDTADLLERPL 180

Query: 185 SSEMVIFYITQDTQRHPLLPELKSGGFRVTGKMSTLCSLSDPITGELIVEASTVPINSID 244
           SSEMVIFYITQDTQRHPLLPELKSGGFRVTGKMSTLCSLSDPITGEL VEAS VPINSID
Sbjct: 181 SSEMVIFYITQDTQRHPLLPELKSGGFRVTGKMSTLCSLSDPITGELTVEASAVPINSID 240

Query: 245 IHLCRVESVILGERIITETSVIQTTQIADGDVCRNITLPIYAILPRLLTSPTVFAG 301
           IHLCRVESVILGERIITETSVIQ+TQIADGDVCRNITLPIY I PRLLT PTVFAG
Sbjct: 241 IHLCRVESVILGERIITETSVIQSTQIADGDVCRNITLPIYVIPPRLLTCPTVFAG 269

[Close]

BLAST of Spg036149 vs. NCBI nr
Match: XP_004137506.1 (vacuolar protein sorting-associated protein 26C [Cucumis sativus] >KGN64179.1 hypothetical protein Csa_013429 [Cucumis sativus])

HSP 1 Score: 413.7 bits (1062), Expect = 1.5e-111
Identity = 226/294 (76.87%), Postives = 239/294 (81.29%), Query Frame = 0


Query: 7   VELRLSRTNRIYRPSVSLLFPSSILLIIIPLIDFSRSCNVQEHLQGQIIVNSRSSISHSG 66
           VEL+LSRTNRIYRPS                          EHLQGQIIVNSRSSISHSG
Sbjct: 4   VELKLSRTNRIYRPS--------------------------EHLQGQIIVNSRSSISHSG 63

Query: 67  IRLAVNGSVNLQVRGGSAGVIESVYGVIKPISIVNRTIEVRPSGKLASGTTEIPFSIILR 126
           IRLA+NGSVNLQVRGGSAGVIESVYGVIKPISIVNR+I V PSGKLASGT EIPFS+ILR
Sbjct: 64  IRLALNGSVNLQVRGGSAGVIESVYGVIKPISIVNRSILVSPSGKLASGTNEIPFSVILR 123

Query: 127 QPSENFGRFYETFHGTDINIQVSVVNLSTLRLTIQTMLNENNCFSFVLFLADFLERPLSS 186
           QP+EN G++YETFHGTDINIQ  +V +   R  +   L+    F      ADFLERPLSS
Sbjct: 124 QPNENLGKYYETFHGTDINIQY-LVTVDISRGYLHKSLSATMEFIVESDTADFLERPLSS 183

Query: 187 EMVIFYITQDTQRHPLLPELKSGGFRVTGKMSTLCSLSDPITGELIVEASTVPINSIDIH 246
           EMVIFYITQDTQRHPLLPEL+SGGFRVTGKMSTLCSLSDP+TGELIVE S VPINSIDIH
Sbjct: 184 EMVIFYITQDTQRHPLLPELRSGGFRVTGKMSTLCSLSDPLTGELIVETSAVPINSIDIH 243

Query: 247 LCRVESVILGERIITETSVIQTTQIADGDVCRNITLPIYAILPRLLTSPTVFAG 301
           LCRVESVILGERIITETSVIQTTQIADGDVCRNITLPIY ILPRLLT PTVFAG
Sbjct: 244 LCRVESVILGERIITETSVIQTTQIADGDVCRNITLPIYVILPRLLTCPTVFAG 270

[Close]

BLAST of Spg036149 vs. ExPASy Swiss-Prot
Match: O35075 (Vacuolar protein sorting-associated protein 26C OS=Mus musculus OX=10090 GN=Vps26c PE=1 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 2.6e-37
Identity = 99/278 (35.61%), Postives = 150/278 (53.96%), Query Frame = 0


Query: 48  EHLQGQIIVNSRSSISHSGIRLAVNGSVNLQVRGGSAGVIESVYGVIKPISIVNRTIEVR 107
           E L G ++++S+ S+ H G+ L + G+VNLQ+   S GV E+ Y  +KPI I+N TI+V 
Sbjct: 20  EMLSGVVVISSKDSVQHQGVSLTMEGTVNLQLSAKSVGVFEAFYNSVKPIQIINSTIDVL 79

Query: 108 PSGKLASGTTEIPFSIILRQPSENFGRFYETFHGTDINIQVSVVNLSTLRLTIQTMLNEN 167
             GK+ SG TE+PF   L          YET+HG  +NIQ       TLR  ++  L   
Sbjct: 80  KPGKIPSGKTEVPFEFPLLVKGSKV--LYETYHGVFVNIQY------TLRCDMRRSLLAK 139

Query: 168 NCFSFVLFLADFLER--PLSSEMVIFYITQDTQRHPLLPELKSGGFRVTGKM-STLCSLS 227
           +      F+     +   L+   V F IT +T ++ +        F + G + ST C+++
Sbjct: 140 DLTKTCEFIVHSAPQKGKLTPSPVDFTITPETLQN-VKERASLPKFFIRGHLNSTNCAIT 199

Query: 228 DPITGELIVEASTVPINSIDIHLCRVESVILGERIITETSVIQTTQIADGDVCRNITLPI 287
            P+TGEL+VE S   I SI++ L RVE+    E    + + IQ  QIADGD+CRN+++P+
Sbjct: 200 QPLTGELVVEHSDAAIRSIELQLVRVETCGCAEGYARDATEIQNIQIADGDICRNLSVPL 259

Query: 288 YAILPRLLTSPTVFAGLQLNLYPLSFFELIETISSADH 323
           Y + PRL T PT    L+   + + F   +  +  ADH
Sbjct: 260 YMVFPRLFTCPT----LETTNFKVEFEVNVVVLLHADH 284

[Close]

BLAST of Spg036149 vs. ExPASy Swiss-Prot
Match: O14972 (Vacuolar protein sorting-associated protein 26C OS=Homo sapiens OX=9606 GN=VPS26C PE=1 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 2.8e-36
Identity = 102/282 (36.17%), Postives = 148/282 (52.48%), Query Frame = 0


Query: 48  EHLQGQIIVNSRSSISHSGIRLAVNGSVNLQVRGGSAGVIESVYGVIKPISIVNRTIEVR 107
           E L G ++++S+ S+ H G+ L + G+VNLQ+   S GV E+ Y  +KPI I+N TIE+ 
Sbjct: 20  EVLSGVVVISSKDSVQHQGVSLTMEGTVNLQLSAKSVGVFEAFYNSVKPIQIINSTIEMV 79

Query: 108 PSGKLASGTTEIPFSIILRQPSENFGRFYETFHGTDINIQVSVVNLSTLRLTIQTMLNEN 167
             GK  SG TEIPF   L          YET+HG  +NIQ       TLR  ++  L   
Sbjct: 80  KPGKFPSGKTEIPFEFPLHLKGNKV--LYETYHGVFVNIQY------TLRCDMKRSLLAK 139

Query: 168 NCFSFVLFLADFLER--PLSSEMVIFYIT----QDTQRHPLLPELKSGGFRVTGKM-STL 227
           +      F+     +    +   V F IT    Q+ +   LLP+     F + G + ST 
Sbjct: 140 DLTKTCEFIVHSAPQKGKFTPSPVDFTITPETLQNVKERALLPK-----FLLRGHLNSTN 199

Query: 228 CSLSDPITGELIVEASTVPINSIDIHLCRVESVILGERIITETSVIQTTQIADGDVCRNI 287
           C ++ P+TGEL+VE+S   I S+++ L RVE+    E    + + IQ  QIADGDVCR +
Sbjct: 200 CVITQPLTGELVVESSEAAIRSVELQLVRVETCGCAEGYARDATEIQNIQIADGDVCRGL 259

Query: 288 TLPIYAILPRLLTSPTVFAGLQLNLYPLSFFELIETISSADH 323
           ++PIY + PRL T PT    L+   + + F   I  +   DH
Sbjct: 260 SVPIYMVFPRLFTCPT----LETTNFKVEFEVNIVVLLHPDH 284

[Close]

BLAST of Spg036149 vs. ExPASy Swiss-Prot
Match: Q5RF33 (Vacuolar protein sorting-associated protein 26C OS=Pongo abelii OX=9601 GN=VPS26C PE=2 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 4.8e-36
Identity = 102/282 (36.17%), Postives = 147/282 (52.13%), Query Frame = 0


Query: 48  EHLQGQIIVNSRSSISHSGIRLAVNGSVNLQVRGGSAGVIESVYGVIKPISIVNRTIEVR 107
           E L G ++++S+ S+ H G+ L + G+VNLQ+   S GV E+ Y  +KPI I+N  IE+ 
Sbjct: 20  EVLSGVVVISSKDSVQHQGVSLTMEGTVNLQLSAKSVGVFEAFYNSVKPIQIINSNIEMV 79

Query: 108 PSGKLASGTTEIPFSIILRQPSENFGRFYETFHGTDINIQVSVVNLSTLRLTIQTMLNEN 167
             GK  SG TEIPF   L          YET+HG  +NIQ       TLR  ++  L   
Sbjct: 80  KPGKFPSGKTEIPFEFPLHVKGNKV--LYETYHGVFVNIQY------TLRCDMKRSLLAK 139

Query: 168 NCFSFVLFLADFLER--PLSSEMVIFYIT----QDTQRHPLLPELKSGGFRVTGKM-STL 227
           +      F+     +    S   V F IT    Q+ +   LLP+     F + G + ST 
Sbjct: 140 DLTKTCEFIVHSAPQKGKFSPSPVHFTITPETLQNARERALLPK-----FLLRGHLNSTN 199

Query: 228 CSLSDPITGELIVEASTVPINSIDIHLCRVESVILGERIITETSVIQTTQIADGDVCRNI 287
           C ++ P+TGEL+VE+S   I S+++ L RVE+    E    + + IQ  QIADGDVCR +
Sbjct: 200 CVITQPLTGELVVESSEAAIRSVELQLVRVETCGCAEGYARDATEIQNIQIADGDVCRGL 259

Query: 288 TLPIYAILPRLLTSPTVFAGLQLNLYPLSFFELIETISSADH 323
           ++PIY + PRL T PT    L+   + + F   I  +   DH
Sbjct: 260 SVPIYMVFPRLFTCPT----LETTNFKVEFEVNIVVLLHPDH 284

[Close]

BLAST of Spg036149 vs. ExPASy Swiss-Prot
Match: Q54DI8 (Vacuolar protein sorting-associated protein 26C OS=Dictyostelium discoideum OX=44689 GN=vps26c PE=3 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 9.8e-29
Identity = 84/294 (28.57%), Postives = 151/294 (51.36%), Query Frame = 0


Query: 7   VELRLSRTNRIYRPSVSLLFPSSILLIIIPLIDFSRSCNVQEHLQGQIIVNSRSSISHSG 66
           ++L+L + ++IYRP                             + G +++NS+  +SHSG
Sbjct: 5   LDLKLKKIDKIYRPG--------------------------SKVSGNVVINSKDDMSHSG 64

Query: 67  IRLAVNGSVNLQVRGGSAGVIESVYGVIKPISIVNRTIEV-RPSGKLASGTTEIPFSIIL 126
           + + V G+V LQ+   S G+ E+ Y  +KPI++++ TI V    GK  +G TE+PF   L
Sbjct: 65  VTIVVEGTVQLQLSSKSVGLFEAFYNSLKPITLMHYTISVTNGGGKFQAGITELPFEFTL 124

Query: 127 RQPSENFGRFYETFHGTDINIQVSVVNLSTLRLTIQTMLNENNCFSFVLFL----ADFLE 186
            +P  N  + Y+T+HG  +NIQ S +     R  +   L++     F++ +     + L 
Sbjct: 125 -EPLPN-QQLYDTYHGVFVNIQYS-IKCDVKRGILSKDLSKT--IEFIVEVPSQNKEVLM 184

Query: 187 RPLSSEMVIFYITQDT-QRHPLLPELKSGGFRVTGKM-STLCSLSDPITGELIVEASTVP 246
           +     ++ F IT D+      + +     F+++G + S +C++++   G +I+E++   
Sbjct: 185 KSTPESLITFNITPDSLVNFKKISKADVPTFKISGGLVSAICNINEAFQGHMIIESADTV 244

Query: 247 INSIDIHLCRVESVILGERIITETSVIQTTQIADGDVCRNITLPIYAILPRLLT 294
           I S+++ L RVE+    +    E + IQ  QIADGD+ RN  +P+Y + PRL T
Sbjct: 245 IKSVELQLVRVETCGCADGYAREVTEIQNIQIADGDIWRNFKIPLYMVFPRLFT 267

[Close]

BLAST of Spg036149 vs. ExPASy TrEMBL
Match: A0A6J1EBR4 (Down syndrome critical region protein 3 homolog isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111431725 PE=3 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 1.9e-112
Identity = 228/296 (77.03%), Postives = 240/296 (81.08%), Query Frame = 0


Query: 5   MPVELRLSRTNRIYRPSVSLLFPSSILLIIIPLIDFSRSCNVQEHLQGQIIVNSRSSISH 64
           M VE+RLSRTNRIYRPS                          EHLQGQIIVNSRSSISH
Sbjct: 1   MAVEIRLSRTNRIYRPS--------------------------EHLQGQIIVNSRSSISH 60

Query: 65  SGIRLAVNGSVNLQVRGGSAGVIESVYGVIKPISIVNRTIEVRPSGKLASGTTEIPFSII 124
            GI L +NGSVNLQVRGGSAGVIESVYGVIKP+SIVNR+IEVRPSGKL SGTTEIPFS+I
Sbjct: 61  YGISLLLNGSVNLQVRGGSAGVIESVYGVIKPLSIVNRSIEVRPSGKLPSGTTEIPFSVI 120

Query: 125 LRQPSENFGRFYETFHGTDINIQVSVVNLSTLRLTIQTMLNENNCFSFVLFLADFLERPL 184
           LRQPSEN G+FYETFHGTDINIQ  +V +   R  +   L+    F      ADFLERPL
Sbjct: 121 LRQPSENLGKFYETFHGTDINIQY-LVTVGISRGYLHKSLSATIEFIVESDTADFLERPL 180

Query: 185 SSEMVIFYITQDTQRHPLLPELKSGGFRVTGKMSTLCSLSDPITGELIVEASTVPINSID 244
           SSEMVIFYITQDTQRHPLLPELKSGGFRVTGKM+TLCSLSDPITGEL VEAS VPI+SID
Sbjct: 181 SSEMVIFYITQDTQRHPLLPELKSGGFRVTGKMATLCSLSDPITGELTVEASAVPISSID 240

Query: 245 IHLCRVESVILGERIITETSVIQTTQIADGDVCRNITLPIYAILPRLLTSPTVFAG 301
           IHLCRVESVILGERIITETSVIQTTQIADGDVCRNITLPIYAILPRLLT PTVFAG
Sbjct: 241 IHLCRVESVILGERIITETSVIQTTQIADGDVCRNITLPIYAILPRLLTCPTVFAG 269

[Close]

BLAST of Spg036149 vs. ExPASy TrEMBL
Match: A0A6J1E8A3 (Down syndrome critical region protein 3 homolog isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431725 PE=3 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 1.9e-112
Identity = 228/296 (77.03%), Postives = 240/296 (81.08%), Query Frame = 0


Query: 5   MPVELRLSRTNRIYRPSVSLLFPSSILLIIIPLIDFSRSCNVQEHLQGQIIVNSRSSISH 64
           M VE+RLSRTNRIYRPS                          EHLQGQIIVNSRSSISH
Sbjct: 1   MAVEIRLSRTNRIYRPS--------------------------EHLQGQIIVNSRSSISH 60

Query: 65  SGIRLAVNGSVNLQVRGGSAGVIESVYGVIKPISIVNRTIEVRPSGKLASGTTEIPFSII 124
            GI L +NGSVNLQVRGGSAGVIESVYGVIKP+SIVNR+IEVRPSGKL SGTTEIPFS+I
Sbjct: 61  YGISLLLNGSVNLQVRGGSAGVIESVYGVIKPLSIVNRSIEVRPSGKLPSGTTEIPFSVI 120

Query: 125 LRQPSENFGRFYETFHGTDINIQVSVVNLSTLRLTIQTMLNENNCFSFVLFLADFLERPL 184
           LRQPSEN G+FYETFHGTDINIQ  +V +   R  +   L+    F      ADFLERPL
Sbjct: 121 LRQPSENLGKFYETFHGTDINIQY-LVTVGISRGYLHKSLSATIEFIVESDTADFLERPL 180

Query: 185 SSEMVIFYITQDTQRHPLLPELKSGGFRVTGKMSTLCSLSDPITGELIVEASTVPINSID 244
           SSEMVIFYITQDTQRHPLLPELKSGGFRVTGKM+TLCSLSDPITGEL VEAS VPI+SID
Sbjct: 181 SSEMVIFYITQDTQRHPLLPELKSGGFRVTGKMATLCSLSDPITGELTVEASAVPISSID 240

Query: 245 IHLCRVESVILGERIITETSVIQTTQIADGDVCRNITLPIYAILPRLLTSPTVFAG 301
           IHLCRVESVILGERIITETSVIQTTQIADGDVCRNITLPIYAILPRLLT PTVFAG
Sbjct: 241 IHLCRVESVILGERIITETSVIQTTQIADGDVCRNITLPIYAILPRLLTCPTVFAG 269

[Close]

BLAST of Spg036149 vs. ExPASy TrEMBL
Match: A0A6J1C810 (Down syndrome critical region protein 3 homolog isoform X1 OS=Momordica charantia OX=3673 GN=LOC111009075 PE=3 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 5.6e-112
Identity = 229/296 (77.36%), Postives = 238/296 (80.41%), Query Frame = 0


Query: 5   MPVELRLSRTNRIYRPSVSLLFPSSILLIIIPLIDFSRSCNVQEHLQGQIIVNSRSSISH 64
           MPVELRLSRTNRIYRPS                          EHLQGQIIVNS SSISH
Sbjct: 1   MPVELRLSRTNRIYRPS--------------------------EHLQGQIIVNSPSSISH 60

Query: 65  SGIRLAVNGSVNLQVRGGSAGVIESVYGVIKPISIVNRTIEVRPSGKLASGTTEIPFSII 124
           SGIRLAVNGSVNLQ+RGGSAGVIESVYGVIKP  IVN++IEVRPSGKLASGTTEIPFSII
Sbjct: 61  SGIRLAVNGSVNLQIRGGSAGVIESVYGVIKPTPIVNKSIEVRPSGKLASGTTEIPFSII 120

Query: 125 LRQPSENFGRFYETFHGTDINIQVSVVNLSTLRLTIQTMLNENNCFSFVLFLADFLERPL 184
           LRQPSE  GRFYETFHGT+INIQ  +V +   R  +   L+    F      AD LERPL
Sbjct: 121 LRQPSETLGRFYETFHGTNINIQY-LVTVDISRGYLHKSLSATIEFIVESDTADLLERPL 180

Query: 185 SSEMVIFYITQDTQRHPLLPELKSGGFRVTGKMSTLCSLSDPITGELIVEASTVPINSID 244
           SSEMVIFYITQDTQRHPLLPELKSGGFRVTGKMSTLCSLSDPITGEL VEAS VPINSID
Sbjct: 181 SSEMVIFYITQDTQRHPLLPELKSGGFRVTGKMSTLCSLSDPITGELTVEASAVPINSID 240

Query: 245 IHLCRVESVILGERIITETSVIQTTQIADGDVCRNITLPIYAILPRLLTSPTVFAG 301
           IHLCRVESVILGERIITETSVIQ+TQIADGDVCRNITLPIY I PRLLT PTVFAG
Sbjct: 241 IHLCRVESVILGERIITETSVIQSTQIADGDVCRNITLPIYVIPPRLLTCPTVFAG 269

[Close]

BLAST of Spg036149 vs. ExPASy TrEMBL
Match: A0A0A0LT45 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042860 PE=3 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 7.3e-112
Identity = 226/294 (76.87%), Postives = 239/294 (81.29%), Query Frame = 0


Query: 7   VELRLSRTNRIYRPSVSLLFPSSILLIIIPLIDFSRSCNVQEHLQGQIIVNSRSSISHSG 66
           VEL+LSRTNRIYRPS                          EHLQGQIIVNSRSSISHSG
Sbjct: 4   VELKLSRTNRIYRPS--------------------------EHLQGQIIVNSRSSISHSG 63

Query: 67  IRLAVNGSVNLQVRGGSAGVIESVYGVIKPISIVNRTIEVRPSGKLASGTTEIPFSIILR 126
           IRLA+NGSVNLQVRGGSAGVIESVYGVIKPISIVNR+I V PSGKLASGT EIPFS+ILR
Sbjct: 64  IRLALNGSVNLQVRGGSAGVIESVYGVIKPISIVNRSILVSPSGKLASGTNEIPFSVILR 123

Query: 127 QPSENFGRFYETFHGTDINIQVSVVNLSTLRLTIQTMLNENNCFSFVLFLADFLERPLSS 186
           QP+EN G++YETFHGTDINIQ  +V +   R  +   L+    F      ADFLERPLSS
Sbjct: 124 QPNENLGKYYETFHGTDINIQY-LVTVDISRGYLHKSLSATMEFIVESDTADFLERPLSS 183

Query: 187 EMVIFYITQDTQRHPLLPELKSGGFRVTGKMSTLCSLSDPITGELIVEASTVPINSIDIH 246
           EMVIFYITQDTQRHPLLPEL+SGGFRVTGKMSTLCSLSDP+TGELIVE S VPINSIDIH
Sbjct: 184 EMVIFYITQDTQRHPLLPELRSGGFRVTGKMSTLCSLSDPLTGELIVETSAVPINSIDIH 243

Query: 247 LCRVESVILGERIITETSVIQTTQIADGDVCRNITLPIYAILPRLLTSPTVFAG 301
           LCRVESVILGERIITETSVIQTTQIADGDVCRNITLPIY ILPRLLT PTVFAG
Sbjct: 244 LCRVESVILGERIITETSVIQTTQIADGDVCRNITLPIYVILPRLLTCPTVFAG 270

[Close]

BLAST of Spg036149 vs. ExPASy TrEMBL
Match: A0A6J1KJN3 (Down syndrome critical region protein 3 homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111495832 PE=3 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 1.2e-111
Identity = 227/296 (76.69%), Postives = 238/296 (80.41%), Query Frame = 0


Query: 5   MPVELRLSRTNRIYRPSVSLLFPSSILLIIIPLIDFSRSCNVQEHLQGQIIVNSRSSISH 64
           M VE+RLSRTNRIYRPS                          EHLQGQIIVNSRSSISH
Sbjct: 1   MAVEIRLSRTNRIYRPS--------------------------EHLQGQIIVNSRSSISH 60

Query: 65  SGIRLAVNGSVNLQVRGGSAGVIESVYGVIKPISIVNRTIEVRPSGKLASGTTEIPFSII 124
            GI L +NGSVNLQVRGGSAGVIESVYGVIKPISIVNR+IEVRPSGKL SGTTEIPFS+I
Sbjct: 61  YGISLLLNGSVNLQVRGGSAGVIESVYGVIKPISIVNRSIEVRPSGKLPSGTTEIPFSVI 120

Query: 125 LRQPSENFGRFYETFHGTDINIQVSVVNLSTLRLTIQTMLNENNCFSFVLFLADFLERPL 184
           LRQP EN G+FYETFHGTDINIQ  +V +   R  +   L+    F      ADFLERPL
Sbjct: 121 LRQPDENLGKFYETFHGTDINIQY-LVTVGISRGYLHKSLSATIEFIVESDTADFLERPL 180

Query: 185 SSEMVIFYITQDTQRHPLLPELKSGGFRVTGKMSTLCSLSDPITGELIVEASTVPINSID 244
           SSEMVIFYITQDTQRHPLLPELKSGGFRVTGKM+TLCSLSDPITGEL VEAS VPI+SID
Sbjct: 181 SSEMVIFYITQDTQRHPLLPELKSGGFRVTGKMATLCSLSDPITGELTVEASAVPISSID 240

Query: 245 IHLCRVESVILGERIITETSVIQTTQIADGDVCRNITLPIYAILPRLLTSPTVFAG 301
           IHLCRVESVILGERIITETSVIQTTQIADGDVCRNI LPIYAILPRLLT PTVFAG
Sbjct: 241 IHLCRVESVILGERIITETSVIQTTQIADGDVCRNIALPIYAILPRLLTCPTVFAG 269

[Close]

BLAST of Spg036149 vs. TAIR 10
Match: AT1G48550.2 (Vacuolar protein sorting-associated protein 26 )

HSP 1 Score: 330.1 bits (845), Expect = 2.0e-90
Identity = 179/300 (59.67%), Postives = 217/300 (72.33%), Query Frame = 0


Query: 2   AVAMPVELRLSRTNRIYRPSVSLLFPSSILLIIIPLIDFSRSCNVQEHLQGQIIVNSRSS 61
           A A  V ++LSR+NRIYR S                          E ++G+I++ S +S
Sbjct: 2   ATATTVNVKLSRSNRIYRSS--------------------------EPVEGKIVIKSATS 61

Query: 62  ISHSGIRLAVNGSVNLQVRGGSAGVIESVYGVIKPISIVNRTIEVRPSGKLASGTTEIPF 121
           ISH  IRL+VNGSVNLQVRGGSAGVIES YGVIKPI IV +TIEV+ SGK+  GTTEIPF
Sbjct: 62  ISHQAIRLSVNGSVNLQVRGGSAGVIESFYGVIKPIQIVKKTIEVKSSGKIPPGTTEIPF 121

Query: 122 SIILRQPSENF-GRFYETFHGTDINIQVSVVNLSTLRLTIQTMLNENNCFSFVLFLADFL 181
           S+ LR+P E    +FYETFHGT+INIQVS +    L   +   +     F       D  
Sbjct: 122 SLNLREPGEGIVEKFYETFHGTNINIQVSNIPRGYLHKPLSATME----FIIESGRVDLP 181

Query: 182 ERPLSSEMVIFYITQDTQRHPLLPELKSGGFRVTGKMSTLCSLSDPITGELIVEASTVPI 241
           ERP+  E+VIFYITQDTQRHPLLP++K+GGFRVTGK++T CSL DP++GEL VEAS+VPI
Sbjct: 182 ERPIPPEIVIFYITQDTQRHPLLPDIKTGGFRVTGKLATQCSLQDPLSGELTVEASSVPI 241

Query: 242 NSIDIHLCRVESVILGERIITETSVIQTTQIADGDVCRNITLPIYAILPRLLTSPTVFAG 301
            SIDIHL RVES+I+GERI+TETS+IQ+TQIADGDVCRN+TLPIY +LPRLL  P+VFAG
Sbjct: 242 TSIDIHLLRVESIIVGERIVTETSLIQSTQIADGDVCRNMTLPIYVLLPRLLMCPSVFAG 271

[Close]

BLAST of Spg036149 vs. TAIR 10
Match: AT1G48550.1 (Vacuolar protein sorting-associated protein 26 )

HSP 1 Score: 326.2 bits (835), Expect = 3.0e-89
Identity = 178/300 (59.33%), Postives = 217/300 (72.33%), Query Frame = 0


Query: 2   AVAMPVELRLSRTNRIYRPSVSLLFPSSILLIIIPLIDFSRSCNVQEHLQGQIIVNSRSS 61
           A A  V ++LSR+NRIYR S                          E ++G+I++ S +S
Sbjct: 2   ATATTVNVKLSRSNRIYRSS--------------------------EPVEGKIVIKSATS 61

Query: 62  ISHSGIRLAVNGSVNLQVRGGSAGVIESVYGVIKPISIVNRTIEVRPSGKLASGTTEIPF 121
           ISH  IRL+VNGSVNLQVRGGSAGVIES YGVIKPI IV +TIEV+ SGK+  GTTEIPF
Sbjct: 62  ISHQAIRLSVNGSVNLQVRGGSAGVIESFYGVIKPIQIVKKTIEVKSSGKIPPGTTEIPF 121

Query: 122 SIILRQPSENF-GRFYETFHGTDINIQVSVVNLSTLRLTIQTMLNENNCFSFVLFLADFL 181
           S+ LR+P E    +FYETFHGT+INIQ  ++     R  +   L+    F       D  
Sbjct: 122 SLNLREPGEGIVEKFYETFHGTNINIQY-LLTADIPRGYLHKPLSATMEFIIESGRVDLP 181

Query: 182 ERPLSSEMVIFYITQDTQRHPLLPELKSGGFRVTGKMSTLCSLSDPITGELIVEASTVPI 241
           ERP+  E+VIFYITQDTQRHPLLP++K+GGFRVTGK++T CSL DP++GEL VEAS+VPI
Sbjct: 182 ERPIPPEIVIFYITQDTQRHPLLPDIKTGGFRVTGKLATQCSLQDPLSGELTVEASSVPI 241

Query: 242 NSIDIHLCRVESVILGERIITETSVIQTTQIADGDVCRNITLPIYAILPRLLTSPTVFAG 301
            SIDIHL RVES+I+GERI+TETS+IQ+TQIADGDVCRN+TLPIY +LPRLL  P+VFAG
Sbjct: 242 TSIDIHLLRVESIIVGERIVTETSLIQSTQIADGDVCRNMTLPIYVLLPRLLMCPSVFAG 274

The following BLAST results are available for this feature:

BLAST of Spg036149 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895697.1	1.0e-112	74.28	vacuolar protein sorting-associated protein 26C isoform X1 [Benincasa hispida]	[more]
XP_022924207.1	4.0e-112	77.03	Down syndrome critical region protein 3 homolog isoform X1 [Cucurbita moschata] ...	[more]
XP_022924208.1	4.0e-112	77.03	Down syndrome critical region protein 3 homolog isoform X2 [Cucurbita moschata] ...	[more]
XP_022137704.1	1.2e-111	77.36	Down syndrome critical region protein 3 homolog isoform X1 [Momordica charantia]	[more]
XP_004137506.1	1.5e-111	76.87	vacuolar protein sorting-associated protein 26C [Cucumis sativus] >KGN64179.1 hy...	[more]

BLAST of Spg036149 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O35075	2.6e-37	35.61	Vacuolar protein sorting-associated protein 26C OS=Mus musculus OX=10090 GN=Vps2...	[more]
O14972	2.8e-36	36.17	Vacuolar protein sorting-associated protein 26C OS=Homo sapiens OX=9606 GN=VPS26...	[more]
Q5RF33	4.8e-36	36.17	Vacuolar protein sorting-associated protein 26C OS=Pongo abelii OX=9601 GN=VPS26...	[more]
Q54DI8	9.8e-29	28.57	Vacuolar protein sorting-associated protein 26C OS=Dictyostelium discoideum OX=4...	[more]

BLAST of Spg036149 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EBR4	1.9e-112	77.03	Down syndrome critical region protein 3 homolog isoform X2 OS=Cucurbita moschata...	[more]
A0A6J1E8A3	1.9e-112	77.03	Down syndrome critical region protein 3 homolog isoform X1 OS=Cucurbita moschata...	[more]
A0A6J1C810	5.6e-112	77.36	Down syndrome critical region protein 3 homolog isoform X1 OS=Momordica charanti...	[more]
A0A0A0LT45	7.3e-112	76.87	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042860 PE=3 SV=1	[more]
A0A6J1KJN3	1.2e-111	76.69	Down syndrome critical region protein 3 homolog isoform X2 OS=Cucurbita maxima O...	[more]

BLAST of Spg036149 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G48550.2	2.0e-90	59.67	Vacuolar protein sorting-associated protein 26	[more]
AT1G48550.1	3.0e-89	59.33	Vacuolar protein sorting-associated protein 26	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014752	Arrestin-like, C-terminal	GENE3D	2.60.40.640		coord: 42..163 e-value: 2.6E-14 score: 54.9
IPR014752	Arrestin-like, C-terminal	GENE3D	2.60.40.640		coord: 215..304 e-value: 9.2E-18 score: 66.2
IPR028934	Vacuolar protein sorting protein 26 related	PFAM	PF03643	Vps26	coord: 47..297 e-value: 8.1E-22 score: 77.5
IPR028934	Vacuolar protein sorting protein 26 related	PANTHER	PTHR12233	VACUOLAR PROTEIN SORTING 26 RELATED	coord: 7..300
None	No IPR available	PANTHER	PTHR12233:SF2	VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 26C	coord: 7..300

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg036149.1	Spg036149.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0042147	retrograde transport, endosome to Golgi
biological_process	GO:0048768	root hair cell tip growth
cellular_component	GO:0005829	cytosol
cellular_component	GO:0010008	endosome membrane
cellular_component	GO:0030904	retromer complex