Spg036049 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg036049
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	MRP-S28 domain-containing protein
Location	scaffold5: 46792301 .. 46794307 (+)
RNA-Seq Expression	Spg036049
Synteny	Spg036049

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCTTTCCGTCATAAACCCTGAGAAAATGGGGATAAACCCTAGAACTGTAGAGAAACGACATGAAACGAGCTATATGGAGAGCTGTCTTCAATGTCTGTGCTCGGAGGGTTTCCGTCTCTCCTCCCCTACAAACCTTTCGCTCTGGTCCTTTAATGGCTCGGCTTTCCGTTTTGGATTCGTTCCAATGGCGATGCTACTCATCCGGGAATGACAAGTACAATGGATTGAACTCAACAACGAATCAGAACAAGGATTCTCTCGTTGAAGATGACGTCAGTACCGAAGGTAAAAGAAAATTGAAAGTTGTTTGTCAATTTTGTCTGTGTTTCGTTTCTATGAAAGCTGAGGGACAGGAAAAGATTCTTCAGATGGAATTCTTGGAATTTTTTCGACAATTCGAATTTTTTGGTGGCTCATCTGCATAACAAAGTTTCGATTCCGACACTTGGTCGTAATTGTGACTTTTCTCATTTTTGGCTAAACTTGCGAGATTTTGGGCACTACAAATTTTTGAATTGTCTTGGGCCAATCCGAGCATAGCTTTATGGGAAAGACAACAATTGCCATCTCAAAGATCTATAGTAATTCCCACCCCACATTTTATGAATTAAAAAGAAGTATGAATCGTCTTCAATCTTATATTCATACTGCTGATAATTGCGGAATTTTATCTTCATACCGTGAGATGGTTCTCAGTAATTTTTTAGTAAACTTGATAATTATCATTATTTTGCATTTCTTTAAATTATTGTACATTCCTTATCATTCTGTTATAAACTGTGATAAAGGGATATACTTTCTCTAGTTTAATAGTTTGAGTTCTCGAGTTAATATTAGTTTAACATAATATTTGACTAGAAGATTTTGAGTTATAACCCCTGGCTTATGTATAGGTTATTTATCATTCTAAAATTTAGAATAGATGTGTTCAAAAGCGTTGTTAAAGAAACTACTTTTATCAAGAGACTTATATGATAAGGAACTTAACATGTGTGATAAAAATTCAAACTGTTTGTTGGTTCTAATATATATTGAAAATGATTTTCATCTAATTAGATATACGTTTTGAATGAGTAATCTTTTGAGAGTGATGTGAAAATAATTGAAATAACAAGGCAATTAAGTGAAAGAAAATGTATGTTCTTAGAGAATAAGTGAGAGGAAGCAAACGTGCTCAGAAAACTAGTGAGCGTATGTAAAGTAATAGTTAAAAGAAATGTATGAGAGGGAAGTTTGGAAGATAAAATGGGTAGACAGCTCAGGATGGAAGCATTTTTAGCGATTTAAAAGAAGTACTTTTGTCATGATTAGCCCCAAAGATGTTGAAATGCTTGTTATTTTGGTTTGCTCATATTCACATGAAGTTTATTCGTAACCCAGATCTATTTTTAATAATATGGTTGATTTTTATTTGAAAGGAAAAGAAAGCAACAGAGATGGTCATTTTCTTCCTTTGGTGGTTGAGTTTCTGGATTTTTATACGTGTGATTTATGAGCTAATACGGTAAGTTTTTGTGATTGCAGAGCTAAAGAGGAAGATAAATAACTTTTACGAAGGGGATGTTGATTCATTACCATCAATTTTTGAAGCAATTTTGAAGAGAAAGCTATCAGGTAAACATGAAGATGCCGATGATGAGCTGATGAAAGAAATTCGGCAGCGAATGCCGGGCCAAGTTGAAGATTTTAAAGATGAAGAATATGATTCAGATTCAGGTGAGTTGAAGGAAACTGATGAAGAAATGGAGGATTTCAGTTGTGCCAGTGATTCCGAGGAAGAAGAAGATAGAAGGGTATAAGTTATGTTTATAACTTGGGTTCTATAGTCTATATGCTCGTTTAATGTTAGATTTTACATTTTAAGGTGAAAATTTTCAAATTTTAATCTTTTATTTAGTTTGGAAATCTTCAACCCATTTTAATTCAGACGAACATATCAGGCGATTGTGGGGTCTATGTGAACTCGAACCTACTAGTGGAAATTGATTATTGGAATTGTTGCACTA

mRNA sequence

ATGAAACGAGCTATATGGAGAGCTGTCTTCAATGTCTGTGCTCGGAGGGTTTCCGTCTCTCCTCCCCTACAAACCTTTCGCTCTGGTCCTTTAATGGCTCGGCTTTCCGTTTTGGATTCGTTCCAATGGCGATGCTACTCATCCGGGAATGACAAGTACAATGGATTGAACTCAACAACGAATCAGAACAAGGATTCTCTCGTTGAAGATGACGTCAGTACCGAAGAGCTAAAGAGGAAGATAAATAACTTTTACGAAGGGGATGTTGATTCATTACCATCAATTTTTGAAGCAATTTTGAAGAGAAAGCTATCAGGTAAACATGAAGATGCCGATGATGAGCTGATGAAAGAAATTCGGCAGCGAATGCCGGGCCAAGTTGAAGATTTTAAAGATGAAGAATATGATTCAGATTCAGGTGAGTTGAAGGAAACTGATGAAGAAATGGAGGATTTCAGTTGTGCCAGTGATTCCGAGGAAGAAGAAGATAGAAGGGTATAA

Coding sequence (CDS)

ATGAAACGAGCTATATGGAGAGCTGTCTTCAATGTCTGTGCTCGGAGGGTTTCCGTCTCTCCTCCCCTACAAACCTTTCGCTCTGGTCCTTTAATGGCTCGGCTTTCCGTTTTGGATTCGTTCCAATGGCGATGCTACTCATCCGGGAATGACAAGTACAATGGATTGAACTCAACAACGAATCAGAACAAGGATTCTCTCGTTGAAGATGACGTCAGTACCGAAGAGCTAAAGAGGAAGATAAATAACTTTTACGAAGGGGATGTTGATTCATTACCATCAATTTTTGAAGCAATTTTGAAGAGAAAGCTATCAGGTAAACATGAAGATGCCGATGATGAGCTGATGAAAGAAATTCGGCAGCGAATGCCGGGCCAAGTTGAAGATTTTAAAGATGAAGAATATGATTCAGATTCAGGTGAGTTGAAGGAAACTGATGAAGAAATGGAGGATTTCAGTTGTGCCAGTGATTCCGAGGAAGAAGAAGATAGAAGGGTATAA

Protein sequence

MKRAIWRAVFNVCARRVSVSPPLQTFRSGPLMARLSVLDSFQWRCYSSGNDKYNGLNSTTNQNKDSLVEDDVSTEELKRKINNFYEGDVDSLPSIFEAILKRKLSGKHEDADDELMKEIRQRMPGQVEDFKDEEYDSDSGELKETDEEMEDFSCASDSEEEEDRRV

Homology

[Close]

BLAST of Spg036049 vs. NCBI nr
Match: XP_023519890.1 (uncharacterized protein LOC111783221 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 237.7 bits (605), Expect = 7.4e-59
Identity = 131/167 (78.44%), Postives = 143/167 (85.63%), Query Frame = 0


Query: 1   MKRAIWRAVFNVCARRVSVSPPLQTFRSGPLMARLSVLDSFQWRCYSSGNDKYNGLNSTT 60
           MKRAIW AVF VC+RRVS+SP LQT RSGPL+   SV  + Q RCYS+GNDKYNGLNSTT
Sbjct: 1   MKRAIWGAVFTVCSRRVSISPLLQTLRSGPLLPPFSVSIASQSRCYSTGNDKYNGLNSTT 60

Query: 61  NQNKDSLVEDDVSTEELKRKINNFYEGDVDSLPSIFEAILKRKLSGKHEDADDELMKEIR 120
            +NKDSLV+DDVS EELKRKI+ FYEGDV+SLP+IFEAILKRKLSGKH DADDELMKEIR
Sbjct: 61  IENKDSLVDDDVSNEELKRKIDRFYEGDVESLPTIFEAILKRKLSGKHGDADDELMKEIR 120

Query: 121 QRMPGQVEDFKDEEYDSD-SGELKETDEEMEDFSCASDSEEEEDRRV 167
           QRMPG+VEDFKDEEYDSD SGEL ETDEEME+     D  EEEDRRV
Sbjct: 121 QRMPGEVEDFKDEEYDSDLSGELNETDEEMEE-----DPSEEEDRRV 162

[Close]

BLAST of Spg036049 vs. NCBI nr
Match: KAG7019929.1 (hypothetical protein SDJN02_18896, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 236.1 bits (601), Expect = 2.2e-58
Identity = 129/167 (77.25%), Postives = 143/167 (85.63%), Query Frame = 0


Query: 1   MKRAIWRAVFNVCARRVSVSPPLQTFRSGPLMARLSVLDSFQWRCYSSGNDKYNGLNSTT 60
           MKRAIW AVF  C+RRVS+SP LQT RSGPL+   SV  S Q RCYSSGNDKYNGLNSTT
Sbjct: 1   MKRAIWGAVFAACSRRVSISPLLQTLRSGPLLPSFSVSISSQSRCYSSGNDKYNGLNSTT 60

Query: 61  NQNKDSLVEDDVSTEELKRKINNFYEGDVDSLPSIFEAILKRKLSGKHEDADDELMKEIR 120
            +NKDSLV+DD+S EELKRKI+ FYEGD++SLP+IFEAILKRKLSGKH DADDELMKEIR
Sbjct: 61  IENKDSLVDDDISNEELKRKIDRFYEGDIESLPAIFEAILKRKLSGKHGDADDELMKEIR 120

Query: 121 QRMPGQVEDFKDEEYDSD-SGELKETDEEMEDFSCASDSEEEEDRRV 167
           QRMPG+VEDFKDEEYDSD SGEL E+DEEM++     DS EEEDRRV
Sbjct: 121 QRMPGEVEDFKDEEYDSDLSGELNESDEEMKE-----DSSEEEDRRV 162

[Close]

BLAST of Spg036049 vs. NCBI nr
Match: XP_022924024.1 (uncharacterized protein LOC111431572 [Cucurbita moschata])

HSP 1 Score: 236.1 bits (601), Expect = 2.2e-58
Identity = 130/167 (77.84%), Postives = 143/167 (85.63%), Query Frame = 0


Query: 1   MKRAIWRAVFNVCARRVSVSPPLQTFRSGPLMARLSVLDSFQWRCYSSGNDKYNGLNSTT 60
           MKRAIW AVF  C+RRVS+SP LQT RSGPL+   SV  S Q RCYSSGNDKYNGLNSTT
Sbjct: 1   MKRAIWGAVFTACSRRVSISPLLQTLRSGPLLPSFSVSISSQSRCYSSGNDKYNGLNSTT 60

Query: 61  NQNKDSLVEDDVSTEELKRKINNFYEGDVDSLPSIFEAILKRKLSGKHEDADDELMKEIR 120
            +NKDSLV+DDVS EELKRKI+ FYEGDV+SLP+IFEAILKRKLSGKH DADDELMKEIR
Sbjct: 61  IENKDSLVDDDVSNEELKRKIDRFYEGDVESLPTIFEAILKRKLSGKHGDADDELMKEIR 120

Query: 121 QRMPGQVEDFKDEEYDSD-SGELKETDEEMEDFSCASDSEEEEDRRV 167
           QR+PG+VEDFKDEEYDSD SGEL E+DEEM++     DS EEEDRRV
Sbjct: 121 QRVPGEVEDFKDEEYDSDLSGELNESDEEMKE-----DSSEEEDRRV 162

[Close]

BLAST of Spg036049 vs. NCBI nr
Match: KAG6584340.1 (hypothetical protein SDJN03_20272, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 235.0 bits (598), Expect = 4.8e-58
Identity = 129/167 (77.25%), Postives = 143/167 (85.63%), Query Frame = 0


Query: 1   MKRAIWRAVFNVCARRVSVSPPLQTFRSGPLMARLSVLDSFQWRCYSSGNDKYNGLNSTT 60
           MKRAIW AVF  C+RRVS+SP LQT RSGPL+   SV  S Q RCYSSGNDKYNGLNST+
Sbjct: 1   MKRAIWGAVFAACSRRVSISPLLQTLRSGPLLPSFSVSISSQSRCYSSGNDKYNGLNSTS 60

Query: 61  NQNKDSLVEDDVSTEELKRKINNFYEGDVDSLPSIFEAILKRKLSGKHEDADDELMKEIR 120
            +NKDSLV+DD+S EELKRKI+ FYEGDV+SLP+IFEAILKRKLSGKH DADDELMKEIR
Sbjct: 61  IENKDSLVDDDISNEELKRKIDRFYEGDVESLPAIFEAILKRKLSGKHGDADDELMKEIR 120

Query: 121 QRMPGQVEDFKDEEYDSD-SGELKETDEEMEDFSCASDSEEEEDRRV 167
           QRMPG+VEDFKDEEYDSD SGEL E+DEEM++     DS EEEDRRV
Sbjct: 121 QRMPGEVEDFKDEEYDSDLSGELNESDEEMKE-----DSSEEEDRRV 162

[Close]

BLAST of Spg036049 vs. NCBI nr
Match: XP_023000953.1 (uncharacterized protein LOC111495236 [Cucurbita maxima])

HSP 1 Score: 226.5 bits (576), Expect = 1.7e-55
Identity = 127/165 (76.97%), Postives = 138/165 (83.64%), Query Frame = 0


Query: 1   MKRAIWRAVFNVCARRVSVSPPLQTFRSGPLMARLSVLDSFQWRCYSSGNDKYNGLNSTT 60
           MKRAIW AVF  C+RRVS+ P LQT RSGPL+   SV  S Q RCYSSGNDKYNGLNSTT
Sbjct: 1   MKRAIWGAVFAACSRRVSIPPLLQTLRSGPLLPPFSVSISSQSRCYSSGNDKYNGLNSTT 60

Query: 61  NQNKDSLVEDDVSTEELKRKINNFYEGDVDSLPSIFEAILKRKLSGKHEDADDELMKEIR 120
            +NKDSLV+D VS EELKRKI+ FYEGDV+SLP+IFEAILKRKLSGKH DADDELMKEI 
Sbjct: 61  IENKDSLVDDYVSNEELKRKIDRFYEGDVESLPTIFEAILKRKLSGKHGDADDELMKEIL 120

Query: 121 QRMPGQVEDFKDEEYDSD-SGELKETDEEMEDFSCASDSEEEEDR 165
           QRMPG+VEDFKDEEYDSD SG+L ETDEEME+     DS EEEDR
Sbjct: 121 QRMPGEVEDFKDEEYDSDLSGDLNETDEEMEE-----DSSEEEDR 160

[Close]

BLAST of Spg036049 vs. ExPASy TrEMBL
Match: A0A6J1E804 (uncharacterized protein LOC111431572 OS=Cucurbita moschata OX=3662 GN=LOC111431572 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 1.0e-58
Identity = 130/167 (77.84%), Postives = 143/167 (85.63%), Query Frame = 0


Query: 1   MKRAIWRAVFNVCARRVSVSPPLQTFRSGPLMARLSVLDSFQWRCYSSGNDKYNGLNSTT 60
           MKRAIW AVF  C+RRVS+SP LQT RSGPL+   SV  S Q RCYSSGNDKYNGLNSTT
Sbjct: 1   MKRAIWGAVFTACSRRVSISPLLQTLRSGPLLPSFSVSISSQSRCYSSGNDKYNGLNSTT 60

Query: 61  NQNKDSLVEDDVSTEELKRKINNFYEGDVDSLPSIFEAILKRKLSGKHEDADDELMKEIR 120
            +NKDSLV+DDVS EELKRKI+ FYEGDV+SLP+IFEAILKRKLSGKH DADDELMKEIR
Sbjct: 61  IENKDSLVDDDVSNEELKRKIDRFYEGDVESLPTIFEAILKRKLSGKHGDADDELMKEIR 120

Query: 121 QRMPGQVEDFKDEEYDSD-SGELKETDEEMEDFSCASDSEEEEDRRV 167
           QR+PG+VEDFKDEEYDSD SGEL E+DEEM++     DS EEEDRRV
Sbjct: 121 QRVPGEVEDFKDEEYDSDLSGELNESDEEMKE-----DSSEEEDRRV 162

[Close]

BLAST of Spg036049 vs. ExPASy TrEMBL
Match: A0A6J1KP40 (uncharacterized protein LOC111495236 OS=Cucurbita maxima OX=3661 GN=LOC111495236 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 8.3e-56
Identity = 127/165 (76.97%), Postives = 138/165 (83.64%), Query Frame = 0


Query: 1   MKRAIWRAVFNVCARRVSVSPPLQTFRSGPLMARLSVLDSFQWRCYSSGNDKYNGLNSTT 60
           MKRAIW AVF  C+RRVS+ P LQT RSGPL+   SV  S Q RCYSSGNDKYNGLNSTT
Sbjct: 1   MKRAIWGAVFAACSRRVSIPPLLQTLRSGPLLPPFSVSISSQSRCYSSGNDKYNGLNSTT 60

Query: 61  NQNKDSLVEDDVSTEELKRKINNFYEGDVDSLPSIFEAILKRKLSGKHEDADDELMKEIR 120
            +NKDSLV+D VS EELKRKI+ FYEGDV+SLP+IFEAILKRKLSGKH DADDELMKEI 
Sbjct: 61  IENKDSLVDDYVSNEELKRKIDRFYEGDVESLPTIFEAILKRKLSGKHGDADDELMKEIL 120

Query: 121 QRMPGQVEDFKDEEYDSD-SGELKETDEEMEDFSCASDSEEEEDR 165
           QRMPG+VEDFKDEEYDSD SG+L ETDEEME+     DS EEEDR
Sbjct: 121 QRMPGEVEDFKDEEYDSDLSGDLNETDEEMEE-----DSSEEEDR 160

[Close]

BLAST of Spg036049 vs. ExPASy TrEMBL
Match: A0A6J1C5J6 (uncharacterized protein LOC111008596 OS=Momordica charantia OX=3673 GN=LOC111008596 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.8e-55
Identity = 126/166 (75.90%), Postives = 138/166 (83.13%), Query Frame = 0


Query: 1   MKRAIWRAVFNVCARRVSVSPPLQTFRSGPLMARLSVLDSFQWRCYSSGNDKYNGLNSTT 60
           M RA+WRAVFNV AR VS+SPPLQT  SG   AR +VL S Q RCYSS NDKYNGLNSTT
Sbjct: 1   MNRALWRAVFNVYARSVSISPPLQTPCSGHFPARFAVLASLQPRCYSSKNDKYNGLNSTT 60

Query: 61  NQNKDSLVEDDVSTEELKRKINNFYEGDVDSLPSIFEAILKRKLSGKHEDADDELMKEIR 120
           NQN  S+V+DDVSTEELKRKI+ FYEGDV+SLPSIFEAILKRKLSGKHE ADDELMKEIR
Sbjct: 61  NQNDHSVVDDDVSTEELKRKIDKFYEGDVESLPSIFEAILKRKLSGKHEGADDELMKEIR 120

Query: 121 QRMPGQVEDFKDEEYDSDSGELKETDEEMEDFSCASDS--EEEEDR 165
           QRMPGQ+EDFKD+E  SD    +ETDEE++DFS A DS   EEEDR
Sbjct: 121 QRMPGQMEDFKDDECASDLNGFEETDEEIDDFSHARDSSDSEEEDR 166

[Close]

BLAST of Spg036049 vs. ExPASy TrEMBL
Match: A0A5D3BIA4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002170 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 2.0e-49
Identity = 119/165 (72.12%), Postives = 133/165 (80.61%), Query Frame = 0


Query: 1   MKRAIWRAVFNVCARRVSVSPPLQTFRSGPLMARLSVLDSFQWRCYSSGNDKYNGLNSTT 60
           MKRA+W AVFNVC+R +SVSPPL+TFRS PL++  SV   F  RCYSSGNDKYN LNST 
Sbjct: 1   MKRALWGAVFNVCSRTLSVSPPLRTFRSVPLLSPFSV---FTLRCYSSGNDKYNELNST- 60

Query: 61  NQNKDSLVEDDVSTEELKRKINNFYE-GDVDSLPSIFEAILKRKLSGKHEDADDELMKEI 120
            +NKDSLV+DDVSTEELKRKI+ FYE GD DSLP IFEAILKRKLSGKHEDADDELMKEI
Sbjct: 61  -KNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPEIFEAILKRKLSGKHEDADDELMKEI 120

Query: 121 RQRMPGQVEDFKDEEYDSDSGELKETDEEMEDFSCASDSEEEEDR 165
           RQRMPG++EDFK EEYDS+      TD+       ASDSEEE+ R
Sbjct: 121 RQRMPGEIEDFKGEEYDSEL-----TDD------AASDSEEEDKR 149

[Close]

BLAST of Spg036049 vs. ExPASy TrEMBL
Match: A0A1S3CEX3 (uncharacterized protein LOC103499929 OS=Cucumis melo OX=3656 GN=LOC103499929 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 2.0e-49
Identity = 119/165 (72.12%), Postives = 133/165 (80.61%), Query Frame = 0


Query: 1   MKRAIWRAVFNVCARRVSVSPPLQTFRSGPLMARLSVLDSFQWRCYSSGNDKYNGLNSTT 60
           MKRA+W AVFNVC+R +SVSPPL+TFRS PL++  SV   F  RCYSSGNDKYN LNST 
Sbjct: 1   MKRALWGAVFNVCSRTLSVSPPLRTFRSVPLLSPFSV---FTLRCYSSGNDKYNELNST- 60

Query: 61  NQNKDSLVEDDVSTEELKRKINNFYE-GDVDSLPSIFEAILKRKLSGKHEDADDELMKEI 120
            +NKDSLV+DDVSTEELKRKI+ FYE GD DSLP IFEAILKRKLSGKHEDADDELMKEI
Sbjct: 61  -KNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPEIFEAILKRKLSGKHEDADDELMKEI 120

Query: 121 RQRMPGQVEDFKDEEYDSDSGELKETDEEMEDFSCASDSEEEEDR 165
           RQRMPG++EDFK EEYDS+      TD+       ASDSEEE+ R
Sbjct: 121 RQRMPGEIEDFKGEEYDSEL-----TDD------AASDSEEEDKR 149

[Close]

BLAST of Spg036049 vs. TAIR 10
Match: AT3G18240.1 (Ribosomal protein S24/S35, mitochondrial )

HSP 1 Score: 77.8 bits (190), Expect = 9.2e-15
Identity = 60/166 (36.14%), Postives = 102/166 (61.45%), Query Frame = 0


Query: 11  NVCARRVSVSPPL--QTFRSGPLMARLSVLDSFQWRCYSSGNDKYNGLNSTT-------- 70
           ++CARR+ +SP +  Q   + P +A ++   + ++R +SS     +G NSTT        
Sbjct: 10  SLCARRIILSPRITHQISPNVPFLAPIAAPAAPKFRFFSS----ESGENSTTAPESSPTD 69

Query: 71  NQNKDSLVEDDVSTEELKRKINNFY-EGDVDSLPSIFEAILKRKLSGKHEDADDELMKEI 130
           +  K  LV +DVS +ELK +I  ++ EG+ D+LP + EA+L+R+L  KH + DDEL+++I
Sbjct: 70  SPEKKDLVVEDVSNKELKSRIEKYFNEGNEDALPGVIEALLQRRLVDKHAETDDELLEKI 129

Query: 131 RQRMPGQVEDFKDEEYDSDSGELKETDEEMEDFSCASDSEEEEDRR 166
            + +P + +D KDE+++SD  E   TDEE+ED   + +   E+ R+
Sbjct: 130 -ESLPFK-DDVKDEDFESDFEEAHSTDEELEDLYNSPEYVAEKMRK 169

[Close]

BLAST of Spg036049 vs. TAIR 10
Match: AT3G18240.2 (Ribosomal protein S24/S35, mitochondrial )

HSP 1 Score: 77.8 bits (190), Expect = 9.2e-15
Identity = 60/166 (36.14%), Postives = 102/166 (61.45%), Query Frame = 0


Query: 11  NVCARRVSVSPPL--QTFRSGPLMARLSVLDSFQWRCYSSGNDKYNGLNSTT-------- 70
           ++CARR+ +SP +  Q   + P +A ++   + ++R +SS     +G NSTT        
Sbjct: 10  SLCARRIILSPRITHQISPNVPFLAPIAAPAAPKFRFFSS----ESGENSTTAPESSPTD 69

Query: 71  NQNKDSLVEDDVSTEELKRKINNFY-EGDVDSLPSIFEAILKRKLSGKHEDADDELMKEI 130
           +  K  LV +DVS +ELK +I  ++ EG+ D+LP + EA+L+R+L  KH + DDEL+++I
Sbjct: 70  SPEKKDLVVEDVSNKELKSRIEKYFNEGNEDALPGVIEALLQRRLVDKHAETDDELLEKI 129

Query: 131 RQRMPGQVEDFKDEEYDSDSGELKETDEEMEDFSCASDSEEEEDRR 166
            + +P + +D KDE+++SD  E   TDEE+ED   + +   E+ R+
Sbjct: 130 -ESLPFK-DDVKDEDFESDFEEAHSTDEELEDLYNSPEYVAEKMRK 169

[Close]

BLAST of Spg036049 vs. TAIR 10
Match: AT4G21460.1 (Ribosomal protein S24/S35, mitochondrial )

HSP 1 Score: 74.7 bits (182), Expect = 7.8e-14
Identity = 62/174 (35.63%), Postives = 106/174 (60.92%), Query Frame = 0


Query: 1   MKRAIWRAVFNVCARRVSVSPPLQTFRSGPLMARLSVLDSFQWRCYSSGNDKYNGLNSTT 60
           M+ A++R   ++CARR+ +S  +    + P +  ++     ++R +SS     +G NSTT
Sbjct: 1   MRGALFRNA-SLCARRIILSSRISP--NVPFLTPIAAPAPPKFRFFSS----ESGENSTT 60

Query: 61  --------NQNKDSLVEDDVSTEELKRKIN-NFYEGDVDSLPSIFEAILKRKLSGKHEDA 120
                   + +K  LV +DVS +ELK +I+ +F EG+ D+LP + EA+L+R+L  KH + 
Sbjct: 61  ATESSPTDSSDKKDLVVEDVSNKELKSRIDKSFNEGNEDALPGVIEALLQRRLVDKHAET 120

Query: 121 DDELMKEIRQRMPGQVEDFKDEEYDSDSGELKETDEEMEDFSCASDSEEEEDRR 166
           DDELM++I + +P + +D KDE+++SD  E   TDEE+ED   + +   E+ R+
Sbjct: 121 DDELMEKI-ESLPFK-DDVKDEDFESDFEEAHSTDEELEDLYNSPEYVAEKMRK 165

[Close]

BLAST of Spg036049 vs. TAIR 10
Match: AT1G73770.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: Ribosomal protein S24/S35, mitochondrial (TAIR:AT3G18240.2); Has 951 Blast hits to 569 proteins in 87 species: Archae - 0; Bacteria - 746; Metazoa - 33; Fungi - 46; Plants - 57; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). )

HSP 1 Score: 54.3 bits (129), Expect = 1.1e-07
Identity = 40/113 (35.40%), Postives = 70/113 (61.95%), Query Frame = 0


Query: 57  NSTTNQNKDSLVEDDVSTEELKRKINNFY-EGDVDSLPSIFEAILKRKLSGKHEDADDEL 116
           +S ++ ++    E+ +S EELK++I +F  +G+ D++P +FEA++ RKLSGKH+D+DDE+
Sbjct: 49  SSESDSSRGFRTEEVLSKEELKKRIQSFLDDGNEDAIPDLFEALMIRKLSGKHDDSDDEV 108

Query: 117 MKEIRQRMPGQVEDFKDEEYDSDS---GELKETDEEMEDF--SCASDSEEEED 164
           M  +R+          D + D +S   G+  ++D E +D     +SDS+ E D
Sbjct: 109 MDVVRKYPVNDAHKVDDIDSDIESDGHGDSSDSDIESDDLRDGDSSDSDVEFD 161

[Close]

BLAST of Spg036049 vs. TAIR 10
Match: AT1G73770.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: Ribosomal protein S24/S35, mitochondrial (TAIR:AT3G18240.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 54.3 bits (129), Expect = 1.1e-07
Identity = 40/113 (35.40%), Postives = 70/113 (61.95%), Query Frame = 0


Query: 57  NSTTNQNKDSLVEDDVSTEELKRKINNFY-EGDVDSLPSIFEAILKRKLSGKHEDADDEL 116
           +S ++ ++    E+ +S EELK++I +F  +G+ D++P +FEA++ RKLSGKH+D+DDE+
Sbjct: 49  SSESDSSRGFRTEEVLSKEELKKRIQSFLDDGNEDAIPDLFEALMIRKLSGKHDDSDDEV 108

Query: 117 MKEIRQRMPGQVEDFKDEEYDSDS---GELKETDEEMEDF--SCASDSEEEED 164
           M  +R+          D + D +S   G+  ++D E +D     +SDS+ E D
Sbjct: 109 MDVVRKYPVNDAHKVDDIDSDIESDGHGDSSDSDIESDDLRDGDSSDSDVEFD 161

The following BLAST results are available for this feature:

BLAST of Spg036049 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023519890.1	7.4e-59	78.44	uncharacterized protein LOC111783221 [Cucurbita pepo subsp. pepo]	[more]
KAG7019929.1	2.2e-58	77.25	hypothetical protein SDJN02_18896, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022924024.1	2.2e-58	77.84	uncharacterized protein LOC111431572 [Cucurbita moschata]	[more]
KAG6584340.1	4.8e-58	77.25	hypothetical protein SDJN03_20272, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023000953.1	1.7e-55	76.97	uncharacterized protein LOC111495236 [Cucurbita maxima]	[more]

BLAST of Spg036049 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg036049 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E804	1.0e-58	77.84	uncharacterized protein LOC111431572 OS=Cucurbita moschata OX=3662 GN=LOC1114315...	[more]
A0A6J1KP40	8.3e-56	76.97	uncharacterized protein LOC111495236 OS=Cucurbita maxima OX=3661 GN=LOC111495236...	[more]
A0A6J1C5J6	1.8e-55	75.90	uncharacterized protein LOC111008596 OS=Momordica charantia OX=3673 GN=LOC111008...	[more]
A0A5D3BIA4	2.0e-49	72.12	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CEX3	2.0e-49	72.12	uncharacterized protein LOC103499929 OS=Cucumis melo OX=3656 GN=LOC103499929 PE=...	[more]

BLAST of Spg036049 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18240.1	9.2e-15	36.14	Ribosomal protein S24/S35, mitochondrial	[more]
AT3G18240.2	9.2e-15	36.14	Ribosomal protein S24/S35, mitochondrial	[more]
AT4G21460.1	7.8e-14	35.63	Ribosomal protein S24/S35, mitochondrial	[more]
AT1G73770.1	1.1e-07	35.40	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT1G73770.2	1.1e-07	35.40	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 142..162
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 105..130
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 131..157
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 105..166

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg036049.1	Spg036049.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005739	mitochondrion