Spg036049 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTCTTTCCGTCATAAACCCTGAGAAAATGGGGATAAACCCTAGAACTGTAGAGAAACGACATGAAACGAGCTATATGGAGAGCTGTCTTCAATGTCTGTGCTCGGAGGGTTTCCGTCTCTCCTCCCCTACAAACCTTTCGCTCTGGTCCTTTAATGGCTCGGCTTTCCGTTTTGGATTCGTTCCAATGGCGATGCTACTCATCCGGGAATGACAAGTACAATGGATTGAACTCAACAACGAATCAGAACAAGGATTCTCTCGTTGAAGATGACGTCAGTACCGAAGGTAAAAGAAAATTGAAAGTTGTTTGTCAATTTTGTCTGTGTTTCGTTTCTATGAAAGCTGAGGGACAGGAAAAGATTCTTCAGATGGAATTCTTGGAATTTTTTCGACAATTCGAATTTTTTGGTGGCTCATCTGCATAACAAAGTTTCGATTCCGACACTTGGTCGTAATTGTGACTTTTCTCATTTTTGGCTAAACTTGCGAGATTTTGGGCACTACAAATTTTTGAATTGTCTTGGGCCAATCCGAGCATAGCTTTATGGGAAAGACAACAATTGCCATCTCAAAGATCTATAGTAATTCCCACCCCACATTTTATGAATTAAAAAGAAGTATGAATCGTCTTCAATCTTATATTCATACTGCTGATAATTGCGGAATTTTATCTTCATACCGTGAGATGGTTCTCAGTAATTTTTTAGTAAACTTGATAATTATCATTATTTTGCATTTCTTTAAATTATTGTACATTCCTTATCATTCTGTTATAAACTGTGATAAAGGGATATACTTTCTCTAGTTTAATAGTTTGAGTTCTCGAGTTAATATTAGTTTAACATAATATTTGACTAGAAGATTTTGAGTTATAACCCCTGGCTTATGTATAGGTTATTTATCATTCTAAAATTTAGAATAGATGTGTTCAAAAGCGTTGTTAAAGAAACTACTTTTATCAAGAGACTTATATGATAAGGAACTTAACATGTGTGATAAAAATTCAAACTGTTTGTTGGTTCTAATATATATTGAAAATGATTTTCATCTAATTAGATATACGTTTTGAATGAGTAATCTTTTGAGAGTGATGTGAAAATAATTGAAATAACAAGGCAATTAAGTGAAAGAAAATGTATGTTCTTAGAGAATAAGTGAGAGGAAGCAAACGTGCTCAGAAAACTAGTGAGCGTATGTAAAGTAATAGTTAAAAGAAATGTATGAGAGGGAAGTTTGGAAGATAAAATGGGTAGACAGCTCAGGATGGAAGCATTTTTAGCGATTTAAAAGAAGTACTTTTGTCATGATTAGCCCCAAAGATGTTGAAATGCTTGTTATTTTGGTTTGCTCATATTCACATGAAGTTTATTCGTAACCCAGATCTATTTTTAATAATATGGTTGATTTTTATTTGAAAGGAAAAGAAAGCAACAGAGATGGTCATTTTCTTCCTTTGGTGGTTGAGTTTCTGGATTTTTATACGTGTGATTTATGAGCTAATACGGTAAGTTTTTGTGATTGCAGAGCTAAAGAGGAAGATAAATAACTTTTACGAAGGGGATGTTGATTCATTACCATCAATTTTTGAAGCAATTTTGAAGAGAAAGCTATCAGGTAAACATGAAGATGCCGATGATGAGCTGATGAAAGAAATTCGGCAGCGAATGCCGGGCCAAGTTGAAGATTTTAAAGATGAAGAATATGATTCAGATTCAGGTGAGTTGAAGGAAACTGATGAAGAAATGGAGGATTTCAGTTGTGCCAGTGATTCCGAGGAAGAAGAAGATAGAAGGGTATAAGTTATGTTTATAACTTGGGTTCTATAGTCTATATGCTCGTTTAATGTTAGATTTTACATTTTAAGGTGAAAATTTTCAAATTTTAATCTTTTATTTAGTTTGGAAATCTTCAACCCATTTTAATTCAGACGAACATATCAGGCGATTGTGGGGTCTATGTGAACTCGAACCTACTAGTGGAAATTGATTATTGGAATTGTTGCACTA ATGAAACGAGCTATATGGAGAGCTGTCTTCAATGTCTGTGCTCGGAGGGTTTCCGTCTCTCCTCCCCTACAAACCTTTCGCTCTGGTCCTTTAATGGCTCGGCTTTCCGTTTTGGATTCGTTCCAATGGCGATGCTACTCATCCGGGAATGACAAGTACAATGGATTGAACTCAACAACGAATCAGAACAAGGATTCTCTCGTTGAAGATGACGTCAGTACCGAAGAGCTAAAGAGGAAGATAAATAACTTTTACGAAGGGGATGTTGATTCATTACCATCAATTTTTGAAGCAATTTTGAAGAGAAAGCTATCAGGTAAACATGAAGATGCCGATGATGAGCTGATGAAAGAAATTCGGCAGCGAATGCCGGGCCAAGTTGAAGATTTTAAAGATGAAGAATATGATTCAGATTCAGGTGAGTTGAAGGAAACTGATGAAGAAATGGAGGATTTCAGTTGTGCCAGTGATTCCGAGGAAGAAGAAGATAGAAGGGTATAA ATGAAACGAGCTATATGGAGAGCTGTCTTCAATGTCTGTGCTCGGAGGGTTTCCGTCTCTCCTCCCCTACAAACCTTTCGCTCTGGTCCTTTAATGGCTCGGCTTTCCGTTTTGGATTCGTTCCAATGGCGATGCTACTCATCCGGGAATGACAAGTACAATGGATTGAACTCAACAACGAATCAGAACAAGGATTCTCTCGTTGAAGATGACGTCAGTACCGAAGAGCTAAAGAGGAAGATAAATAACTTTTACGAAGGGGATGTTGATTCATTACCATCAATTTTTGAAGCAATTTTGAAGAGAAAGCTATCAGGTAAACATGAAGATGCCGATGATGAGCTGATGAAAGAAATTCGGCAGCGAATGCCGGGCCAAGTTGAAGATTTTAAAGATGAAGAATATGATTCAGATTCAGGTGAGTTGAAGGAAACTGATGAAGAAATGGAGGATTTCAGTTGTGCCAGTGATTCCGAGGAAGAAGAAGATAGAAGGGTATAA MKRAIWRAVFNVCARRVSVSPPLQTFRSGPLMARLSVLDSFQWRCYSSGNDKYNGLNSTTNQNKDSLVEDDVSTEELKRKINNFYEGDVDSLPSIFEAILKRKLSGKHEDADDELMKEIRQRMPGQVEDFKDEEYDSDSGELKETDEEMEDFSCASDSEEEEDRRV Homology
BLAST of Spg036049 vs. NCBI nr
Match: XP_023519890.1 (uncharacterized protein LOC111783221 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 237.7 bits (605), Expect = 7.4e-59 Identity = 131/167 (78.44%), Postives = 143/167 (85.63%), Query Frame = 0
BLAST of Spg036049 vs. NCBI nr
Match: KAG7019929.1 (hypothetical protein SDJN02_18896, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 236.1 bits (601), Expect = 2.2e-58 Identity = 129/167 (77.25%), Postives = 143/167 (85.63%), Query Frame = 0
BLAST of Spg036049 vs. NCBI nr
Match: XP_022924024.1 (uncharacterized protein LOC111431572 [Cucurbita moschata]) HSP 1 Score: 236.1 bits (601), Expect = 2.2e-58 Identity = 130/167 (77.84%), Postives = 143/167 (85.63%), Query Frame = 0
BLAST of Spg036049 vs. NCBI nr
Match: KAG6584340.1 (hypothetical protein SDJN03_20272, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 235.0 bits (598), Expect = 4.8e-58 Identity = 129/167 (77.25%), Postives = 143/167 (85.63%), Query Frame = 0
BLAST of Spg036049 vs. NCBI nr
Match: XP_023000953.1 (uncharacterized protein LOC111495236 [Cucurbita maxima]) HSP 1 Score: 226.5 bits (576), Expect = 1.7e-55 Identity = 127/165 (76.97%), Postives = 138/165 (83.64%), Query Frame = 0
BLAST of Spg036049 vs. ExPASy TrEMBL
Match: A0A6J1E804 (uncharacterized protein LOC111431572 OS=Cucurbita moschata OX=3662 GN=LOC111431572 PE=4 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 1.0e-58 Identity = 130/167 (77.84%), Postives = 143/167 (85.63%), Query Frame = 0
BLAST of Spg036049 vs. ExPASy TrEMBL
Match: A0A6J1KP40 (uncharacterized protein LOC111495236 OS=Cucurbita maxima OX=3661 GN=LOC111495236 PE=4 SV=1) HSP 1 Score: 226.5 bits (576), Expect = 8.3e-56 Identity = 127/165 (76.97%), Postives = 138/165 (83.64%), Query Frame = 0
BLAST of Spg036049 vs. ExPASy TrEMBL
Match: A0A6J1C5J6 (uncharacterized protein LOC111008596 OS=Momordica charantia OX=3673 GN=LOC111008596 PE=4 SV=1) HSP 1 Score: 225.3 bits (573), Expect = 1.8e-55 Identity = 126/166 (75.90%), Postives = 138/166 (83.13%), Query Frame = 0
BLAST of Spg036049 vs. ExPASy TrEMBL
Match: A0A5D3BIA4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002170 PE=4 SV=1) HSP 1 Score: 205.3 bits (521), Expect = 2.0e-49 Identity = 119/165 (72.12%), Postives = 133/165 (80.61%), Query Frame = 0
BLAST of Spg036049 vs. ExPASy TrEMBL
Match: A0A1S3CEX3 (uncharacterized protein LOC103499929 OS=Cucumis melo OX=3656 GN=LOC103499929 PE=4 SV=1) HSP 1 Score: 205.3 bits (521), Expect = 2.0e-49 Identity = 119/165 (72.12%), Postives = 133/165 (80.61%), Query Frame = 0
BLAST of Spg036049 vs. TAIR 10
Match: AT3G18240.1 (Ribosomal protein S24/S35, mitochondrial ) HSP 1 Score: 77.8 bits (190), Expect = 9.2e-15 Identity = 60/166 (36.14%), Postives = 102/166 (61.45%), Query Frame = 0
BLAST of Spg036049 vs. TAIR 10
Match: AT3G18240.2 (Ribosomal protein S24/S35, mitochondrial ) HSP 1 Score: 77.8 bits (190), Expect = 9.2e-15 Identity = 60/166 (36.14%), Postives = 102/166 (61.45%), Query Frame = 0
BLAST of Spg036049 vs. TAIR 10
Match: AT4G21460.1 (Ribosomal protein S24/S35, mitochondrial ) HSP 1 Score: 74.7 bits (182), Expect = 7.8e-14 Identity = 62/174 (35.63%), Postives = 106/174 (60.92%), Query Frame = 0
BLAST of Spg036049 vs. TAIR 10
Match: AT1G73770.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: Ribosomal protein S24/S35, mitochondrial (TAIR:AT3G18240.2); Has 951 Blast hits to 569 proteins in 87 species: Archae - 0; Bacteria - 746; Metazoa - 33; Fungi - 46; Plants - 57; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). ) HSP 1 Score: 54.3 bits (129), Expect = 1.1e-07 Identity = 40/113 (35.40%), Postives = 70/113 (61.95%), Query Frame = 0
BLAST of Spg036049 vs. TAIR 10
Match: AT1G73770.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: Ribosomal protein S24/S35, mitochondrial (TAIR:AT3G18240.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 54.3 bits (129), Expect = 1.1e-07 Identity = 40/113 (35.40%), Postives = 70/113 (61.95%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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