Spg035473 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg035473
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase
Location	scaffold3: 476753 .. 478091 (+)
RNA-Seq Expression	Spg035473
Synteny	Spg035473

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGGCGTGGGCGTACATCCGTTCCGAGCCAACCGATGGGGAGGGTGGGCATCGACAGCTAGCTCCACGCCACTCGGCCACGTCGCTCGGGTCGAGCAGCCGTGCGCTCGTGGCGCCTCGACTAGTGAAATAAGGGGTACCCCCACGCCCCGCCATGCAGGCAGGTCGCCCCCCTTTATTATGCCCGTGTGTCGGTTGACACTTCATTGTAGCTAATTAGTGAAAATATGTATGAATTAAGACAAGTGTTTGCATTGTACATTCATATAAGTGAATGAAGATCACAAAATTTGAATAATAATAAACTATAAGGTGCTGGTTTCAACTTCAAAAACATGAAACGTTGAAGAAAAACATTGAGTAATCCAATTTGAGGCCCAAAACGGCCGTATTTTGGATGAAGGGTCGGACAAGCCGCCATCGGCGACTTGCCAGCATGTAGATCTCGAAAAGTTACATGGAATCAAAAAAAAATTCATCCAATTTGGTCAATCGAGCTAAAAGTTATGGCCTTTCAAAGTTTCAACTTAATTCCAACTAGTTGTTGGCGGTATTAGAGTTACAAATCCATTAACAATTGACTCAGTTTATGAGTTTGGGTGTATAGAACACGAAAAAAACGTATAAAATCAAGTGGTCATTTAGCTATAACAAGTCAGTATCGAAGGAGTTATGCTGATCGAAAGATTTACCTTCTGGTGTACGAGTTCCTGTTCGAATGGATCTGGGAAGCAACTGCATTTAAATTATGTACTGGAGAATAACTATATATATTTTGAAATCGATTAAGTTAAAAATTCTCAAGCGGTCCGTTTGGTCTGTTCTTTGTTATTGCATACTCAAGGACAAGAGTTCGAACCTTACTGAATGCATTTTCTTTTTCGTATTTTTTTGGCGCTTTTCATTATTTGCTTTTCTTCTTTTCGGCGCGCAAAAACGCCTATTTGGCCCTTCTCTTTTTTTGTTTTTTTTTTTTAACAAAAACTATTTGGCCTTTTCATTATTCGCTATTCCATTAATCCCCCTCTTTCATTTTCGAGTCCTTTTTCTGTACACAGCAAAGCTTCGTTTTTTTTATCAGATTCTTCATCTTCTTTCTCGAGAAAATAAAAATCCTCGGCCTCCTGAGATTTCTTTTGTAGCGGAGAAATTCACAGCATCCATGGCTGGAAACGGCTCGTACGATTGGGCGGACCAGTGGGACTACAGCGACTCGAAGGACGTAGTCACCGACAACAATAGGAAGAATAGCAGCGGCGGAACCAGTTCGGCCATGTACAAGCAGAAGGTCGGCGAAGGCCTTGGCAAGACCAAAGCGGCGGCCTCTAATGTTTGA

mRNA sequence

ATGAAGGGCGTGGGCGTACATCCGTTCCGAGCCAACCGATGGGGAGGGTGGGCATCGACAGCTAGCTCCACGCCACTCGGCCACGTCGCTCGGGTCGAGCAGCCGTGCGCTCGTGGCGCCTCGACTAGTGAAATAAGGGGTACCCCCACGCCCCGCCATGCAGGCAGGTCGCCCCCCTTTATTATGCCCATTCTTCATCTTCTTTCTCGAGAAAATAAAAATCCTCGGCCTCCTGAGATTTCTTTTGTAGCGGAGAAATTCACAGCATCCATGGCTGGAAACGGCTCGTACGATTGGGCGGACCAGTGGGACTACAGCGACTCGAAGGACGTAGTCACCGACAACAATAGGAAGAATAGCAGCGGCGGAACCAGTTCGGCCATGTACAAGCAGAAGGTCGGCGAAGGCCTTGGCAAGACCAAAGCGGCGGCCTCTAATGTTTGA

Coding sequence (CDS)

ATGAAGGGCGTGGGCGTACATCCGTTCCGAGCCAACCGATGGGGAGGGTGGGCATCGACAGCTAGCTCCACGCCACTCGGCCACGTCGCTCGGGTCGAGCAGCCGTGCGCTCGTGGCGCCTCGACTAGTGAAATAAGGGGTACCCCCACGCCCCGCCATGCAGGCAGGTCGCCCCCCTTTATTATGCCCATTCTTCATCTTCTTTCTCGAGAAAATAAAAATCCTCGGCCTCCTGAGATTTCTTTTGTAGCGGAGAAATTCACAGCATCCATGGCTGGAAACGGCTCGTACGATTGGGCGGACCAGTGGGACTACAGCGACTCGAAGGACGTAGTCACCGACAACAATAGGAAGAATAGCAGCGGCGGAACCAGTTCGGCCATGTACAAGCAGAAGGTCGGCGAAGGCCTTGGCAAGACCAAAGCGGCGGCCTCTAATGTTTGA

Protein sequence

MKGVGVHPFRANRWGGWASTASSTPLGHVARVEQPCARGASTSEIRGTPTPRHAGRSPPFIMPILHLLSRENKNPRPPEISFVAEKFTASMAGNGSYDWADQWDYSDSKDVVTDNNRKNSSGGTSSAMYKQKVGEGLGKTKAAASNV

Homology

[Close]

BLAST of Spg035473 vs. NCBI nr
Match: XP_023516550.1 (uncharacterized protein LOC111780400 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 95.9 bits (237), Expect = 3.1e-16
Identity = 52/83 (62.65%), Postives = 60/83 (72.29%), Query Frame = 0


Query: 64  ILHLLSRENKNPRPPEISFVAEKFTASMAGNGSYDWADQWDYSDSKDVVTDNNRKNSSGG 123
           ILHLLS      R  +    + +   SMAG+GSYDWADQWDYSDSKDVVT+ N+K S GG
Sbjct: 12  ILHLLSPRFLCSRDFQTQNHSNRSVKSMAGSGSYDWADQWDYSDSKDVVTE-NKKKSGGG 71

Query: 124 TSSAMYKQKVGEGLGKTKAAASN 147
            ++  YKQKVGEGLGKTKA ASN
Sbjct: 72  NTTTKYKQKVGEGLGKTKAVASN 93

[Close]

BLAST of Spg035473 vs. NCBI nr
Match: XP_022988421.1 (uncharacterized protein LOC111485668 [Cucurbita maxima] >XP_022988422.1 uncharacterized protein LOC111485668 [Cucurbita maxima])

HSP 1 Score: 93.2 bits (230), Expect = 2.0e-15
Identity = 44/57 (77.19%), Postives = 49/57 (85.96%), Query Frame = 0


Query: 90  SMAGNGSYDWADQWDYSDSKDVVTDNNRKNSSGGTSSAMYKQKVGEGLGKTKAAASN 147
           SMAGNGSYDWADQWDYSDSKDVVT+  +K+  GG ++  YKQKVGEGLGKTKA ASN
Sbjct: 38  SMAGNGSYDWADQWDYSDSKDVVTETKKKSGGGGNTTTKYKQKVGEGLGKTKAVASN 94

[Close]

BLAST of Spg035473 vs. NCBI nr
Match: KAG6589470.1 (Alpha-N-acetylglucosaminidase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 92.0 bits (227), Expect = 4.5e-15
Identity = 46/57 (80.70%), Postives = 50/57 (87.72%), Query Frame = 0


Query: 90  SMAGNGSYDWADQWDYSDSKDVVTDNNRKNSSGGTSSAMYKQKVGEGLGKTKAAASN 147
           SMAGNGSYDWADQWDYSDSKDVVT+N +K S GG ++  YKQKVGEGLGKTKA ASN
Sbjct: 81  SMAGNGSYDWADQWDYSDSKDVVTENTKK-SGGGNTTTKYKQKVGEGLGKTKAVASN 136

[Close]

BLAST of Spg035473 vs. NCBI nr
Match: KAG7023154.1 (hypothetical protein SDJN02_14179, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 90.9 bits (224), Expect = 9.9e-15
Identity = 45/56 (80.36%), Postives = 49/56 (87.50%), Query Frame = 0


Query: 91  MAGNGSYDWADQWDYSDSKDVVTDNNRKNSSGGTSSAMYKQKVGEGLGKTKAAASN 147
           MAGNGSYDWADQWDYSDSKDVVT+N +K S GG ++  YKQKVGEGLGKTKA ASN
Sbjct: 1   MAGNGSYDWADQWDYSDSKDVVTENTKK-SGGGNTTTKYKQKVGEGLGKTKAVASN 55

[Close]

BLAST of Spg035473 vs. NCBI nr
Match: XP_022921775.1 (uncharacterized protein LOC111429929 [Cucurbita moschata])

HSP 1 Score: 90.9 bits (224), Expect = 9.9e-15
Identity = 45/56 (80.36%), Postives = 49/56 (87.50%), Query Frame = 0


Query: 91  MAGNGSYDWADQWDYSDSKDVVTDNNRKNSSGGTSSAMYKQKVGEGLGKTKAAASN 147
           MAGNGSYDWADQWDYSDSKDVVT+N +K S GG ++  YKQKVGEGLGKTKA ASN
Sbjct: 1   MAGNGSYDWADQWDYSDSKDVVTENTKK-SGGGNTTTKYKQKVGEGLGKTKAVASN 55

[Close]

BLAST of Spg035473 vs. ExPASy TrEMBL
Match: A0A6J1JCZ5 (uncharacterized protein LOC111485668 OS=Cucurbita maxima OX=3661 GN=LOC111485668 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 9.7e-16
Identity = 44/57 (77.19%), Postives = 49/57 (85.96%), Query Frame = 0


Query: 90  SMAGNGSYDWADQWDYSDSKDVVTDNNRKNSSGGTSSAMYKQKVGEGLGKTKAAASN 147
           SMAGNGSYDWADQWDYSDSKDVVT+  +K+  GG ++  YKQKVGEGLGKTKA ASN
Sbjct: 38  SMAGNGSYDWADQWDYSDSKDVVTETKKKSGGGGNTTTKYKQKVGEGLGKTKAVASN 94

[Close]

BLAST of Spg035473 vs. ExPASy TrEMBL
Match: A0A6J1E6S2 (uncharacterized protein LOC111429929 OS=Cucurbita moschata OX=3662 GN=LOC111429929 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 4.8e-15
Identity = 45/56 (80.36%), Postives = 49/56 (87.50%), Query Frame = 0


Query: 91  MAGNGSYDWADQWDYSDSKDVVTDNNRKNSSGGTSSAMYKQKVGEGLGKTKAAASN 147
           MAGNGSYDWADQWDYSDSKDVVT+N +K S GG ++  YKQKVGEGLGKTKA ASN
Sbjct: 1   MAGNGSYDWADQWDYSDSKDVVTENTKK-SGGGNTTTKYKQKVGEGLGKTKAVASN 55

[Close]

BLAST of Spg035473 vs. ExPASy TrEMBL
Match: A0A6J1C2W0 (uncharacterized protein LOC111007442 OS=Momordica charantia OX=3673 GN=LOC111007442 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 1.4e-14
Identity = 44/56 (78.57%), Postives = 47/56 (83.93%), Query Frame = 0


Query: 91  MAGNGSYDWADQWDYSDSKDVVTDNNRKNSSGGTSSAMYKQKVGEGLGKTKAAASN 147
           MAGNGSYDWADQWDYSDSK++VTD N+K   GG   A YKQKVGEGLGKTKA ASN
Sbjct: 1   MAGNGSYDWADQWDYSDSKEIVTDKNKKGGGGG--GAKYKQKVGEGLGKTKAVASN 54

[Close]

BLAST of Spg035473 vs. ExPASy TrEMBL
Match: A0A5A7UUQ6 (Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G002040 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 1.7e-12
Identity = 42/54 (77.78%), Postives = 46/54 (85.19%), Query Frame = 0


Query: 94  NGSYDWADQWDYSDSKDVVTDNNRK-NSSGGTSSAMYKQKVGEGLGKTKAAASN 147
           N SYDWADQWDY+DS DVVT+N +K + SGG SSA YKQKVGEGLGKTKA ASN
Sbjct: 6   NSSYDWADQWDYNDSADVVTNNKKKISGSGGNSSAKYKQKVGEGLGKTKAVASN 59

[Close]

BLAST of Spg035473 vs. ExPASy TrEMBL
Match: A0A1S3BW93 (uncharacterized protein LOC103493940 OS=Cucumis melo OX=3656 GN=LOC103493940 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 1.7e-12
Identity = 42/54 (77.78%), Postives = 46/54 (85.19%), Query Frame = 0


Query: 94  NGSYDWADQWDYSDSKDVVTDNNRK-NSSGGTSSAMYKQKVGEGLGKTKAAASN 147
           N SYDWADQWDY+DS DVVT+N +K + SGG SSA YKQKVGEGLGKTKA ASN
Sbjct: 6   NSSYDWADQWDYNDSADVVTNNKKKISGSGGNSSAKYKQKVGEGLGKTKAVASN 59

[Close]

BLAST of Spg035473 vs. TAIR 10
Match: AT3G48180.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G19020.1); Has 84 Blast hits to 84 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 43.5 bits (101), Expect = 1.7e-04
Identity = 24/48 (50.00%), Postives = 31/48 (64.58%), Query Frame = 0


Query: 99  WADQWDYSDSKDVVTDNNRKNSSGGTSSAMYKQKVGEGLGKTKAAASN 147
           WA+QWD +      T +      GG +S+ YK+KVG GLGKTKAAAS+
Sbjct: 6   WAEQWDSNQQSSGKTTH---GGEGGGASSKYKEKVGAGLGKTKAAASS 50

The following BLAST results are available for this feature:

BLAST of Spg035473 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023516550.1	3.1e-16	62.65	uncharacterized protein LOC111780400 [Cucurbita pepo subsp. pepo]	[more]
XP_022988421.1	2.0e-15	77.19	uncharacterized protein LOC111485668 [Cucurbita maxima] >XP_022988422.1 uncharac...	[more]
KAG6589470.1	4.5e-15	80.70	Alpha-N-acetylglucosaminidase, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7023154.1	9.9e-15	80.36	hypothetical protein SDJN02_14179, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022921775.1	9.9e-15	80.36	uncharacterized protein LOC111429929 [Cucurbita moschata]	[more]

BLAST of Spg035473 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg035473 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JCZ5	9.7e-16	77.19	uncharacterized protein LOC111485668 OS=Cucurbita maxima OX=3661 GN=LOC111485668...	[more]
A0A6J1E6S2	4.8e-15	80.36	uncharacterized protein LOC111429929 OS=Cucurbita moschata OX=3662 GN=LOC1114299...	[more]
A0A6J1C2W0	1.4e-14	78.57	uncharacterized protein LOC111007442 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A5A7UUQ6	1.7e-12	77.78	Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase OS=C...	[more]
A0A1S3BW93	1.7e-12	77.78	uncharacterized protein LOC103493940 OS=Cucumis melo OX=3656 GN=LOC103493940 PE=...	[more]

BLAST of Spg035473 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G48180.1	1.7e-04	50.00	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg035473.1	Spg035473.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030639	polyketide biosynthetic process
molecular_function	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups