Spg035221 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg035221
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Reverse transcriptase domain-containing protein
Location	scaffold4: 24650505 .. 24652906 (-)
RNA-Seq Expression	Spg035221
Synteny	Spg035221

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTGTGTGCTGGTATTTGTGTGCTGTGGCGGTGTTAGGGTTTGCGTTTTGTGTGGATTTTATCCGTGGGAATTTCAGGTATCGTGGTGTGTTTTTGTTTGCGTGAATTCCTTGTTGCCGATTGTTCTTGAGGGTTGCTAGTGCGTGGACGGTGCAAGCGGTGAGTGGTGGAGTGGTGCAAGTTGTCTTGCGGTGAAGCGGTGAAGCGGTGGACGGTGGGTGTTGTGGTTTGCGGTGGGTGTTATCTGTTTAGCGGTGGGTGTTGTGGTTTCAGGTTGCGATGGGAAAGAAACGTTCTCCGTTGAAGAAACCCAGTGCGCCGGTGCCTGTTCGGAAGAAAGAAGATCAGAAGGTTTCGTCTGTTGCGAAGGTATCATCGGTATTGACTGCAAATGATCCGTCAGTTGTATCATCGGATCCTGTAACGGAGACGAAGGCTGACGATGATGGGTCGTTGCGTAATGACCAGGCGAAATCGACTGATCTGAAGGGTGCTGAGAAGGTTGTGCCGGCAGTGGTTGAGACGGAGTTGACGGCTGCAGGTTCATTGTCTTCATTCGTTCAGGCGGTTGCTAGGGCATCACGAACCATGCAGTCTCGGGTACAATTTTGCCCGTTGGTACAGCGGGTGGGTTTGACTCATGAGTGTGACCCGAAGGGAATTTGACCCATGAGTGTGACCCGAAGGGAAAACAAGTGAAGGATGGGGCTGATGGTGATAATGGGTTTGTTACGGTTGGGCTTGGTAAGAGGGCTATTGCTGGTGGTGGCCATTCCAATAGCAAGCTGGACAAGGGAGGGGCAAATAATGGGCATTCTTGGGCTGATTTATTTGGGCCTAAATATTCTCCTTCTCCGGATTTGCTTTTTGTGCCGCCTAAGGAATTGAATGGTAAACGAGTGGTGGTGCCGGATGAGGATATTCTTGAGGAAGGAATTAATTTATGGAGGAGTTCGCTTGTGGGACAATTTATTGATGCTCGGGTTCCTTTTTCGGTTGTCTCGTATGGTTAATAAGATTTGGGGTCATCTTGAGGAGCCTATGATTATTGTGCTTGAGGATGGCCTTATTATTTTCCAATTCCACCATTCTACCTCTTGTGATTGGATTCTTAAGAATGGGTCGTGGCATATTGGGGGTAAGCCCCTCCTTCTTTGTAAATGGTCCCCATGTATTGTTCCAGAATCTTTTTCCTTTGATAGAGTGCCTGTTTGGGTTAAATTGTCTAAGTTACCGCTAGAATTGTGGACTACTAGAGGTTTGAGTGTGGTTGCTAATGCCATAGGCAGGCCGGTGTGCCTTGATAAGGCTACTGAGGAGCGCTGACGGTTGTCTTTTGCACGTGTTTGTGTGGAGATTGGGCCGAGGGATGATTTACCGAGTACGGTAGAGGTGTGTATTCGTGGCAAGAATTTTGTTGTGGCTGTGGATTATTCTTGGAAGCCTAAGAGGTGTGCGCCTTGTGGTGTATTTGGGCACTCTAGTGCTAGTTGTCCAGAGTCAGTGGTGGTTCGTGATGAGGTTAGGGTTAAGCCTGCCGATCTCCCTTCTACTAGTGTCCCTTCTACTAGTGCCCCTCCTGCAAGTGGTCGGCGAGTGTCGACAAGTCCTAGTCCCCGTGCTTCGCCGGTTGACTCGAAGAGGGTGGGACCAGCTTCGCCTACTAAAGGGGTTGGATCCTCCTCCCCTTCGGGTCATTCGAGCTTAGGGAATTCGTTTGCTATGTTGGAGGGTGATAATGAGTCTGTGCTTGCTGTGGTCCCGGCTGGTACGGACCCTCCTCCATTAGCTATGGTGACGCCCCGATCGAATTTTATTACTTTTGAGCGTTCACCTCAGTTCAGTGTGGACCTCGAGTGGGGGAAGGGTGCCTTGGACCTTCCTTCTGATGACTAGTTGGTGTTCGTGGAATGTGCGGGGGTTGGGGGATCCCGCGAAGGGTCTTGCTGTGCAATCCTTTTTGCAGTCGTCTAGTGTGGGTTTCTGTTGTCTCCTGGAGACTAAGGTGAAGCGTCATCAGTTTGCGTCAGTGTTTGATGGCTTTGGGTCTGATTGGCAGTGTGCTTGTAGTTATGGGACTAGTGGTCTGGGGAGGATCTGGGTGATGTGGAGAGCAAATCGGTTCTCTTTCGTTCCTATTTTTGTTCGGCCACAAATGATTAATGGTACGATTTGTGATCTTTCTTCTCAGGTTTCTGTTGAGGTGGTGTGTGTGTATGCCTCCAATTCTGGGGGGGAGAGACGTGTGTTATGGGATGAGATTCTTGCTGTTTGCTTGGCTTGGAGTTCGCCTGGTCTTGTGATGGGGGACTTCAATGCCATTTGTTGTTCGTCTGAAGGGTTTGGGGGGAGTCCTGATCTCTCGGAGATGGAGGCTTTTAATGATATGTTGATTTAG

mRNA sequence

ATGTCTTGTGTGCTGGTATTTGTGTGCTGTGGCGGTGTTAGGGTTTGCGTTTTGTGTGGATTTTATCCGTGGGAATTTCAGGTTGCGATGGGAAAGAAACGTTCTCCGTTGAAGAAACCCAGTGCGCCGGTGCCTGTTCGGAAGAAAGAAGATCAGAAGGTTTCGTCTGTTGCGAAGGTATCATCGGTATTGACTGCAAATGATCCGTCAGTTGTATCATCGGATCCTGTAACGGAGACGAAGGCTGACGATGATGGGTCGTTGCGTAATGACCAGGCGAAATCGACTGATCTGAAGGGTGCTGAGAAGGTTGTGCCGGCAGTGGTTGAGACGGAGTTGACGGCTGCAGGTTCATTGTCTTCATTCGTTCAGGCGGTTGCTAGGGCATCACGAACCATGCAGTCTCGGTGTGACCCGAAGGGAAAACAAGTGAAGGATGGGGCTGATGGTGATAATGGGTTTGTTACGGTTGGGCTTGGTAAGAGGGCTATTGCTGGTGGTGGCCATTCCAATAGCAAGCTGGACAAGGGAGGGGCAAATAATGGGCATTCTTGGGCTGATTTATTTGGGCCTAAATATTCTCCTTCTCCGGATTTGCTTTTTGTGCCGCCTAAGGAATTGAATGGTAAACGAGTGGTGGTGCCGGATGAGGATATTCTTGAGGAAGGAATTAATTTATGGAGGAGTTCGCTTGTGGGACAATTTATTGATGCTCGGGTTCCTTTTTCGGTTGTCTCGTATGAATCTTTTTCCTTTGATAGAGTGCCTGTTTGGGTTAAATTGTCTAAGTTACCGCTAGAATTGTGGACTACTAGAGGTTTGAGTGTGGTTGCTAATGCCATAGGCAGGCCGATTGGGCCGAGGGATGATTTACCGAGTACGGTAGAGGTGTGTATTCGTGGCAAGAATTTTGTTGTGGCTGTGGATTATTCTTGGAAGCCTAAGAGGTGTGCGCCTTGTGGTGTATTTGGGCACTCTAGTGCTAGTTGTCCAGAGTCAGTGGTGGTTCGTGATGAGGTTAGGGTTAAGCCTGCCGATCTCCCTTCTACTAGTGTCCCTTCTACTAGTGCCCCTCCTGCAAGTGGTCGGCGAGTGTCGACAAGTCCTAGTCCCCGTGCTTCGCCGGTTGACTCGAAGAGGGTGGGACCAGCTTCGCCTACTAAAGGGGTTGGATCCTCCTCCCCTTCGGGTCATTCGAGCTTAGGGAATTCGTTTGCTATGTTGGAGGGTGATAATGAGTCTGTGCTTGCTGTGGTCCCGGCTGTGTGGACCTCGAGTGGGGGAAGGGTGCCTTGGACCTTCCTTCTGATGACTAGTTGGTGTTCGTGGAATGTGCGGGGGTTGGGGGATCCCGCGAAGGGTCTTGCTGTGCAATCCTTTTTGCAGTCGTCTAGTGTGGGTTTCTGTTGTCTCCTGGAGACTAAGGTGAAGCGTCATCAGTTTGCGTCAGTGTTTGATGGCTTTGGGTCTGATTGGCAGTGTGCTTGTAGTTATGGGACTAGTGGTCTGGGGAGGATCTGGGTGATGTGGAGAGCAAATCGGTTCTCTTTCGTTCCTATTTTTGTTCGGCCACAAATGATTAATGGTACGATTTGTGATCTTTCTTCTCAGGTTTCTGTTGAGGTGGTGTGTGTGTATGCCTCCAATTCTGGGGGGGAGAGACGTGTGTTATGGGATGAGATTCTTGCTGTTTGCTTGGCTTGGAGTTCGCCTGGTCTTGTGATGGGGGACTTCAATGCCATTTGTTGTTCGTCTGAAGGGTTTGGGGGGAGTCCTGATCTCTCGGAGATGGAGGCTTTTAATGATATGTTGATTTAG

Coding sequence (CDS)

ATGTCTTGTGTGCTGGTATTTGTGTGCTGTGGCGGTGTTAGGGTTTGCGTTTTGTGTGGATTTTATCCGTGGGAATTTCAGGTTGCGATGGGAAAGAAACGTTCTCCGTTGAAGAAACCCAGTGCGCCGGTGCCTGTTCGGAAGAAAGAAGATCAGAAGGTTTCGTCTGTTGCGAAGGTATCATCGGTATTGACTGCAAATGATCCGTCAGTTGTATCATCGGATCCTGTAACGGAGACGAAGGCTGACGATGATGGGTCGTTGCGTAATGACCAGGCGAAATCGACTGATCTGAAGGGTGCTGAGAAGGTTGTGCCGGCAGTGGTTGAGACGGAGTTGACGGCTGCAGGTTCATTGTCTTCATTCGTTCAGGCGGTTGCTAGGGCATCACGAACCATGCAGTCTCGGTGTGACCCGAAGGGAAAACAAGTGAAGGATGGGGCTGATGGTGATAATGGGTTTGTTACGGTTGGGCTTGGTAAGAGGGCTATTGCTGGTGGTGGCCATTCCAATAGCAAGCTGGACAAGGGAGGGGCAAATAATGGGCATTCTTGGGCTGATTTATTTGGGCCTAAATATTCTCCTTCTCCGGATTTGCTTTTTGTGCCGCCTAAGGAATTGAATGGTAAACGAGTGGTGGTGCCGGATGAGGATATTCTTGAGGAAGGAATTAATTTATGGAGGAGTTCGCTTGTGGGACAATTTATTGATGCTCGGGTTCCTTTTTCGGTTGTCTCGTATGAATCTTTTTCCTTTGATAGAGTGCCTGTTTGGGTTAAATTGTCTAAGTTACCGCTAGAATTGTGGACTACTAGAGGTTTGAGTGTGGTTGCTAATGCCATAGGCAGGCCGATTGGGCCGAGGGATGATTTACCGAGTACGGTAGAGGTGTGTATTCGTGGCAAGAATTTTGTTGTGGCTGTGGATTATTCTTGGAAGCCTAAGAGGTGTGCGCCTTGTGGTGTATTTGGGCACTCTAGTGCTAGTTGTCCAGAGTCAGTGGTGGTTCGTGATGAGGTTAGGGTTAAGCCTGCCGATCTCCCTTCTACTAGTGTCCCTTCTACTAGTGCCCCTCCTGCAAGTGGTCGGCGAGTGTCGACAAGTCCTAGTCCCCGTGCTTCGCCGGTTGACTCGAAGAGGGTGGGACCAGCTTCGCCTACTAAAGGGGTTGGATCCTCCTCCCCTTCGGGTCATTCGAGCTTAGGGAATTCGTTTGCTATGTTGGAGGGTGATAATGAGTCTGTGCTTGCTGTGGTCCCGGCTGTGTGGACCTCGAGTGGGGGAAGGGTGCCTTGGACCTTCCTTCTGATGACTAGTTGGTGTTCGTGGAATGTGCGGGGGTTGGGGGATCCCGCGAAGGGTCTTGCTGTGCAATCCTTTTTGCAGTCGTCTAGTGTGGGTTTCTGTTGTCTCCTGGAGACTAAGGTGAAGCGTCATCAGTTTGCGTCAGTGTTTGATGGCTTTGGGTCTGATTGGCAGTGTGCTTGTAGTTATGGGACTAGTGGTCTGGGGAGGATCTGGGTGATGTGGAGAGCAAATCGGTTCTCTTTCGTTCCTATTTTTGTTCGGCCACAAATGATTAATGGTACGATTTGTGATCTTTCTTCTCAGGTTTCTGTTGAGGTGGTGTGTGTGTATGCCTCCAATTCTGGGGGGGAGAGACGTGTGTTATGGGATGAGATTCTTGCTGTTTGCTTGGCTTGGAGTTCGCCTGGTCTTGTGATGGGGGACTTCAATGCCATTTGTTGTTCGTCTGAAGGGTTTGGGGGGAGTCCTGATCTCTCGGAGATGGAGGCTTTTAATGATATGTTGATTTAG

Protein sequence

MSCVLVFVCCGGVRVCVLCGFYPWEFQVAMGKKRSPLKKPSAPVPVRKKEDQKVSSVAKVSSVLTANDPSVVSSDPVTETKADDDGSLRNDQAKSTDLKGAEKVVPAVVETELTAAGSLSSFVQAVARASRTMQSRCDPKGKQVKDGADGDNGFVTVGLGKRAIAGGGHSNSKLDKGGANNGHSWADLFGPKYSPSPDLLFVPPKELNGKRVVVPDEDILEEGINLWRSSLVGQFIDARVPFSVVSYESFSFDRVPVWVKLSKLPLELWTTRGLSVVANAIGRPIGPRDDLPSTVEVCIRGKNFVVAVDYSWKPKRCAPCGVFGHSSASCPESVVVRDEVRVKPADLPSTSVPSTSAPPASGRRVSTSPSPRASPVDSKRVGPASPTKGVGSSSPSGHSSLGNSFAMLEGDNESVLAVVPAVWTSSGGRVPWTFLLMTSWCSWNVRGLGDPAKGLAVQSFLQSSSVGFCCLLETKVKRHQFASVFDGFGSDWQCACSYGTSGLGRIWVMWRANRFSFVPIFVRPQMINGTICDLSSQVSVEVVCVYASNSGGERRVLWDEILAVCLAWSSPGLVMGDFNAICCSSEGFGGSPDLSEMEAFNDMLI

Homology

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BLAST of Spg035221 vs. NCBI nr
Match: KAA0060724.1 (hypothetical protein E6C27_scaffold72G00110 [Cucumis melo var. makuwa] >TYK01466.1 Exo_endo_phos domain-containing protein/DUF4283 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 252.3 bits (643), Expect = 1.1e-62
Identity = 165/463 (35.64%), Postives = 229/463 (49.46%), Query Frame = 0


Query: 178 GANNGHSWADLFGPKYSPSPDLLFVPPKELNGKRVVVPDEDILEEGINLWRSSLVGQFID 237
           G+N+  +WA LFG   SP   L +  PK +    +VVP E+++ + I +W +SLV     
Sbjct: 140 GSNS--TWASLFGT--SPDGSLPYTQPKTIGDNIIVVPSEEVIAQNIRVWENSLV----- 199

Query: 238 ARVPFSVVSYESFSFDRVPVWVKLSKLPLELWTTRGLSVVANAIGRPI------------ 297
                            VPVW++L ++P+ELWT  GL+VVA+A+G+PI            
Sbjct: 200 -----------------VPVWIRLGRIPMELWTEAGLAVVASAVGKPITLDLATKERRRL 259

Query: 298 ---------GPRDDLPSTVEVCIRGKNFVVAVDYSWKPKRCAPCGVFGHSSASC---PES 357
                         +P+ + V +RG +F+V+++Y WKP +C  C VFGHS   C    ES
Sbjct: 260 SYARVCVKLDGDSHMPAEITVSLRGVDFIVSINYEWKPWKCNLCCVFGHSGGKCHRNVES 319

Query: 358 VVVRDEV--RVKPA------DLPSTSVPSTSAPPASGRRVSTSPSPRASPVDSKRVGPAS 417
            V+++EV  +V P+        P   V   S        + +S +  +S V+ K VG   
Sbjct: 320 KVIQEEVVSKVSPSKGDGLDSEPCGEVVLESFKQLEEGEIRSSRNRHSSQVE-KEVGKRD 379

Query: 418 PTKGVGSSSPSGHSSLGNSFAMLEGDNESVLAVVPAVWTS---SGGRVPWTFLLMTSWCS 477
               V                 +    +S+   +P  + S    G    W   ++    S
Sbjct: 380 DFTLVTRKK--------RELVFVRDRGKSLEVTMPNFFGSLLEVGDFDKWALTIIDGSLS 439

Query: 478 W----NVRGLGDPAKGLAVQSFLQSSSVGFCCLLETKVKRHQFASVFDGFGSDWQCACSY 537
                   G+    K   V  FL SSSVGFCCLLE++ +   F SV   FG  W  +CSY
Sbjct: 440 ALQVDEGTGVLSGVKCKVVFDFLGSSSVGFCCLLESRFRERNFESVSKRFGYSWDYSCSY 499

Query: 538 GTSGLGRIWVMWRANRFSFVPIFVRPQMINGTICDLSSQVSVEVVCVYASNSGGERRVLW 597
             SG+GRIWVMW+ NRFSF    V  Q + GT+ DL S V VEV CVYAS S  ERR+LW
Sbjct: 500 SNSGVGRIWVMWKKNRFSFSTRMVDEQFVIGTLTDLLSDVCVEVFCVYASYSNIERRLLW 559

Query: 598 DEILAVCLAWSSPGLVMGDFNAICCSSEGFGGSPDLSEMEAFN 602
             ++ +   WSSPG+VMGDFN I   SE FGGSP+  EME F+
Sbjct: 560 RRLVEITSGWSSPGVVMGDFNVIRVHSEAFGGSPNQGEMEDFD 567

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BLAST of Spg035221 vs. NCBI nr
Match: TYK28099.1 (uncharacterized protein E5676_scaffold1467G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 250.0 bits (637), Expect = 5.3e-62
Identity = 159/441 (36.05%), Postives = 229/441 (51.93%), Query Frame = 0


Query: 174 LDKGGANNGHSWADLFGPKYSPSPDLLFVPPKELNGKRVVVPDEDILEEGINLWRSSLVG 233
           L+K   ++  +WA LFG   S    L + PPK +  K VV+P E+++++GI +W +SLVG
Sbjct: 183 LNKLSNDSKSTWASLFGT--SSEESLFYTPPKAIGDKIVVIPPEEVIDQGIQVWENSLVG 242

Query: 234 QFIDARVPFSVVSYESFSFDRVPVWVKLSKLPLELWTTRGLSVVANAIGRPIGPRDDLPS 293
           Q IDA++P++V+              +L  + L+  T +   +    +   +    ++ +
Sbjct: 243 QLIDAKLPYAVIQ-------------RLKPISLDFATKKRRRLSYARVCVELEGGSNMSA 302

Query: 294 TVEVCIRGKNFVVAVDYSWKPKRCAPCGVFGHSSASCPESV---VVRDEVRVKPADLP-- 353
            + V +RG +F V+V+Y WKP++C  C  FGHSS+ C  SV    +++EV  K  D+   
Sbjct: 303 EITVSLRGVDFNVSVNYEWKPRKCNLCCAFGHSSSKCSRSVESKTIQEEVVHKGDDVDFE 362

Query: 354 -STSVPSTSAPPASGRRVSTSPSPRASPVDSKRVGPASPTKGVGSSSPSGHSSLGNS-FA 413
               V   S        + +SP+   S V+          KGVG S      +   S   
Sbjct: 363 LCGEVVLESFKQVEKGEIRSSPNRHDSQVE----------KGVGKSDEFTLVTRKKSELV 422

Query: 414 MLEGDNESVLAVVPAVWTS---SGGRVPWTFLLMTSWCSWNVRGLGDPA---KGLAVQSF 473
            +    +S+  ++P  + S    G    W   +        + G   P    +G  V S 
Sbjct: 423 SIRDRGKSMEVIMPNSFGSLLEVGDADKWALSI--------IEGSSPPLQVDEGTDVLSG 482

Query: 474 LQSSSVGFCCLLETKVKRHQFASVFDGFGSDWQCACSYGTSGLGRIWVMWRANRFSFVPI 533
           + SS VGFCCLLET+V+   F SV   F + W  +CSY  SG+GRIWVMW+ NRFSF   
Sbjct: 483 ISSSIVGFCCLLETRVREGNFDSVSRRFSNSWDYSCSYSNSGVGRIWVMWKKNRFSFSTH 542

Query: 534 FVRPQMINGTICDLSSQVSVEVVCVYASNSGGERRVLWDEILAVCLAWSSPGLVMGDFNA 593
            +  Q + GT+ DL S V VEV CVYASNS  ERR+LW  ++ +  AWSSPG+VM DFNA
Sbjct: 543 VMDEQFVTGTLTDLLSGVCVEVFCVYASNSNIERRLLWHRLVEITSAWSSPGVVMEDFNA 590

Query: 594 ICCSSEGFGGSPDLSEMEAFN 602
           I   SE F GSP   EME FN
Sbjct: 603 IRVHSEAFRGSPIQGEMEDFN 590

[Close]

BLAST of Spg035221 vs. NCBI nr
Match: KAA0026071.1 (uncharacterized protein E6C27_scaffold581G00620 [Cucumis melo var. makuwa])

HSP 1 Score: 246.1 bits (627), Expect = 7.6e-61
Identity = 168/488 (34.43%), Postives = 244/488 (50.00%), Query Frame = 0


Query: 129 ASRTMQSRCDPKGKQVKDGADGDNGFVTVG--LGKRAIAGGGHSNSKLDKGGANNGHSWA 188
           A R    +CD  G ++       +G V  G  L  +         + L+K   ++  +WA
Sbjct: 137 AGRNFNGQCD-FGPRINSADLMKHGGVASGSILKNQGANVNNFVENDLNKLSNDSKSTWA 196

Query: 189 DLFGPKYSPSPDLLFVPPKELNGKRVVVPDEDILEEGINLWRSSLVGQFIDARVPFSVVS 248
            LFG   S    L + PPK +  K VV+P E+++++GI +W +SLVGQ IDA++P++V+ 
Sbjct: 197 SLFGT--SSEESLFYTPPKAIGDKIVVIPPEEVIDQGIQVWENSLVGQLIDAKLPYAVIQ 256

Query: 249 YESFSFDRVPVWVKLSKLPLELWTTRGLSVVANAIGRPIGPRDDLPSTVEVCIRGKNFVV 308
                        +L  + L+  T +   +    +   +    ++ + + V +RG +F V
Sbjct: 257 -------------RLKPISLDFATKKRRRLSYARVCVELEGGSNMSAEITVSLRGVDFNV 316

Query: 309 AVDYSWKPKRCAPCGVFGHSSASCPESV---VVRDEVRVKPADLP---STSVPSTSAPPA 368
           +V+Y WKP++C  C  FGHSS+ C  SV    +++EV  K  D+       V   S    
Sbjct: 317 SVNYEWKPRKCNLCCAFGHSSSKCSRSVESKTIQEEVVHKGDDVDFELCGEVVLESFKQV 376

Query: 369 SGRRVSTSPSPRASPVDSKRVGPASPTKGVGSSSPSGHSSLGNS-FAMLEGDNESVLAVV 428
               + +SP+   S V+          KGVG S      +   S    +    +S+  ++
Sbjct: 377 EKGEIRSSPNRHDSQVE----------KGVGKSDEFTLVTRKKSELVSIRDRGKSMEVIM 436

Query: 429 PAVWTS---SGGRVPWTFLLMTSWCSWNVRGLGDPA---KGLAVQSFLQSSSVGFCCLLE 488
           P  + S    G    W   +        + G   P    +G  V S + SS VGFCCLLE
Sbjct: 437 PNSFGSLLEVGDADKWALSI--------IEGSSPPLQVDEGTDVLSGISSSIVGFCCLLE 496

Query: 489 TKVKRHQFASVFDGFGSDWQCACSYGTSGLGRIWVMWRANRFSFVPIFVRPQMINGTICD 548
           T+V+   F SV   F + W  +CSY  SG+GRIWVMW+ NRFSF    +  Q + GT+ D
Sbjct: 497 TRVREGNFDSVSRRFSNSWDYSCSYSNSGVGRIWVMWKKNRFSFSTHVMDEQFVTGTLTD 556

Query: 549 LSSQVSVEVVCVYASNSGGERRVLWDEILAVCLAWSSPGLVMGDFNAICCSSEGFGGSPD 602
           L S V VEV CVYASNS  ERR+LW  ++ +  AWSSPG+VM DFNAI   SE F GSP 
Sbjct: 557 LLSGVCVEVFCVYASNSNIERRLLWHRLVEITSAWSSPGVVMEDFNAIRVHSEAFRGSPI 590

[Close]

BLAST of Spg035221 vs. NCBI nr
Match: KAA0062888.1 (non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa] >TYK22520.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 226.1 bits (575), Expect = 8.1e-55
Identity = 150/403 (37.22%), Postives = 203/403 (50.37%), Query Frame = 0


Query: 248 ESFSFDRVPVWVKLSKLPLELWTTRGLSVVANAIGRPI---------------------G 307
           ESF F+ VPVW++L ++P+ELWT   L++VA+ +G+PI                      
Sbjct: 50  ESFVFNSVPVWIRLGRIPMELWTEAWLAIVASVVGKPITLDLATKEHSRLSYARVCVKLE 109

Query: 308 PRDDLPSTVEVCIRGKNFVVAVDYSWKPKRCAPCGVFGHSSASCPESV---VVRDEV--R 367
              ++ + + V +RG +F V+V+Y WKP++C  C   GHS   CP SV   ++++EV  +
Sbjct: 110 GEFNMRAEITVNLRGVDFNVSVNYEWKPQKCNLCCAIGHSGGKCPRSVESKIIQEEVVSK 169

Query: 368 VKPA------DLPSTSVPSTSAPPASGRRVSTSPSPRASPVDSKRVG----------PAS 427
           + P         P   V   S        + +SP+   S V+ K VG            S
Sbjct: 170 IIPGKGEGVDSEPCAKVVLESFKQLEEGEIRSSPNRHGSHVE-KEVGKRDEFTLVTRKKS 229

Query: 428 PTKGVGSSSPSGHSSLGNSFAML--EGD-NESVLAVV----PAVWTSSGGRVPWTFLLMT 487
               V     S   ++ NSF  L   GD ++  L V+    P +    G           
Sbjct: 230 ELVSVRDRGKSIVVAMPNSFGSLLEVGDVDKWALTVIEGSPPPLQVDEG----------- 289

Query: 488 SWCSWNVRGLGDPAKGLAVQSFLQSSSVGFCCLLETKVKRHQFASVFDGFGSDWQCACSY 547
                   G+    K  AV  FL SSSVGFCCLLET+V+   F  V   FG+ W  +CSY
Sbjct: 290 -------TGVLSDLKSKAVSDFLGSSSVGFCCLLETRVRESNFDYVSRRFGNSWDYSCSY 349

Query: 548 GTSGLGRIWVMWRANRFSFVPIFVRPQMINGTICDLSSQVSVEVVCVYASNSGGERRVLW 602
             SG+GRIWV+W+ NRFSF    V  Q + GT+ DL S V VEV CVYASNS  ERR+LW
Sbjct: 350 SNSGVGRIWVVWKKNRFSFSTCVVDEQFVTGTLTDLLSGVCVEVFCVYASNSNIERRLLW 409

[Close]

BLAST of Spg035221 vs. NCBI nr
Match: KAA0046247.1 (uncharacterized protein E6C27_scaffold284G00450 [Cucumis melo var. makuwa])

HSP 1 Score: 221.9 bits (564), Expect = 1.5e-53
Identity = 162/504 (32.14%), Postives = 225/504 (44.64%), Query Frame = 0


Query: 184 SWADLFGPKYSPSPDLLFVPPKELNGKRVVVPDEDILEEGINLWRSSLVGQFIDARVPFS 243
           +WA LFG   S    LL+  PK +  K VV P E ++++GI +W +SLVGQ ID+++P++
Sbjct: 295 TWASLFGT--SSEESLLYTLPKIIGDKIVVTPPEKVIDQGIKVWENSLVGQLIDSKLPYT 354

Query: 244 VVSY-------------------------------------------------------- 303
           V+ +                                                        
Sbjct: 355 VIQHLVEKIWGKIEMPIITILENDLICFQFRRSKSVEWILSRGPWHLDDKSMLLRKWTPG 414

Query: 304 ---ESFSFDRVPVWVKLSKLPLELWTTRGLSVVANAIGRPIG------------------ 363
              E F F+ VPVW++L KLP+ELWT  GL+VVA+A+G+PI                   
Sbjct: 415 IVPEFFVFNSVPVWIRLGKLPMELWTEAGLAVVASAVGKPISLDLATKERRRLSYARVCV 474

Query: 364 ---PRDDLPSTVEVCIRGKNFVVAVDYSWKPKRCAPCGVFGHSSASCPESV---VVRDEV 423
                 ++P+ + V +RG +F V+V+Y WKP++C  C  FGHS ++C  SV    +++EV
Sbjct: 475 ELEAGSNMPAEITVSLRGVDFNVSVNYEWKPRKCNLCCAFGHSGSNCSRSVESKTIQEEV 534

Query: 424 RVKPADL---PSTSVPSTSAPPASGRRVSTSPSPRASPVDSKRVGPASPTKGVGSSSPSG 483
             K  D+   P   V   S        +  SP+   S V+          KGVG S    
Sbjct: 535 VHKGDDVDSEPCGEVVLESFKQLEEGEIRNSPNRHNSQVE----------KGVGKS---- 594

Query: 484 HSSLGNSFAMLEGDNESVLAVVPAVWTSSGGRVPWTFLLMTSWCSWNVRGLGDPAKGLAV 543
                + F ++      +++V        G   P    L     +  + G+    K  AV
Sbjct: 595 -----DEFTLVTRRKSELVSVRDR--GKKGSPPP----LQVDEGTDILNGM----KSKAV 654

Query: 544 QSFLQSSSVGFCCLLETKVKRHQFASVFDGFGSDWQCACSYGTSGLGRIWVMWRANRFSF 602
             FL SSSVGFCCLLET+V+   F SV   F + W  +CSY  SG+GRIWVMW+ NRFSF
Sbjct: 655 VDFLGSSSVGFCCLLETRVREGNFDSVSKRFSNSWDYSCSYSNSGVGRIWVMWKKNRFSF 714

[Close]

BLAST of Spg035221 vs. ExPASy TrEMBL
Match: A0A5A7V084 (Exo_endo_phos domain-containing protein/DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G00100 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 5.1e-63
Identity = 165/463 (35.64%), Postives = 229/463 (49.46%), Query Frame = 0


Query: 178 GANNGHSWADLFGPKYSPSPDLLFVPPKELNGKRVVVPDEDILEEGINLWRSSLVGQFID 237
           G+N+  +WA LFG   SP   L +  PK +    +VVP E+++ + I +W +SLV     
Sbjct: 140 GSNS--TWASLFGT--SPDGSLPYTQPKTIGDNIIVVPSEEVIAQNIRVWENSLV----- 199

Query: 238 ARVPFSVVSYESFSFDRVPVWVKLSKLPLELWTTRGLSVVANAIGRPI------------ 297
                            VPVW++L ++P+ELWT  GL+VVA+A+G+PI            
Sbjct: 200 -----------------VPVWIRLGRIPMELWTEAGLAVVASAVGKPITLDLATKERRRL 259

Query: 298 ---------GPRDDLPSTVEVCIRGKNFVVAVDYSWKPKRCAPCGVFGHSSASC---PES 357
                         +P+ + V +RG +F+V+++Y WKP +C  C VFGHS   C    ES
Sbjct: 260 SYARVCVKLDGDSHMPAEITVSLRGVDFIVSINYEWKPWKCNLCCVFGHSGGKCHRNVES 319

Query: 358 VVVRDEV--RVKPA------DLPSTSVPSTSAPPASGRRVSTSPSPRASPVDSKRVGPAS 417
            V+++EV  +V P+        P   V   S        + +S +  +S V+ K VG   
Sbjct: 320 KVIQEEVVSKVSPSKGDGLDSEPCGEVVLESFKQLEEGEIRSSRNRHSSQVE-KEVGKRD 379

Query: 418 PTKGVGSSSPSGHSSLGNSFAMLEGDNESVLAVVPAVWTS---SGGRVPWTFLLMTSWCS 477
               V                 +    +S+   +P  + S    G    W   ++    S
Sbjct: 380 DFTLVTRKK--------RELVFVRDRGKSLEVTMPNFFGSLLEVGDFDKWALTIIDGSLS 439

Query: 478 W----NVRGLGDPAKGLAVQSFLQSSSVGFCCLLETKVKRHQFASVFDGFGSDWQCACSY 537
                   G+    K   V  FL SSSVGFCCLLE++ +   F SV   FG  W  +CSY
Sbjct: 440 ALQVDEGTGVLSGVKCKVVFDFLGSSSVGFCCLLESRFRERNFESVSKRFGYSWDYSCSY 499

Query: 538 GTSGLGRIWVMWRANRFSFVPIFVRPQMINGTICDLSSQVSVEVVCVYASNSGGERRVLW 597
             SG+GRIWVMW+ NRFSF    V  Q + GT+ DL S V VEV CVYAS S  ERR+LW
Sbjct: 500 SNSGVGRIWVMWKKNRFSFSTRMVDEQFVIGTLTDLLSDVCVEVFCVYASYSNIERRLLW 559

Query: 598 DEILAVCLAWSSPGLVMGDFNAICCSSEGFGGSPDLSEMEAFN 602
             ++ +   WSSPG+VMGDFN I   SE FGGSP+  EME F+
Sbjct: 560 RRLVEITSGWSSPGVVMGDFNVIRVHSEAFGGSPNQGEMEDFD 567

[Close]

BLAST of Spg035221 vs. ExPASy TrEMBL
Match: A0A5D3DXE4 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1467G00020 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 2.6e-62
Identity = 159/441 (36.05%), Postives = 229/441 (51.93%), Query Frame = 0


Query: 174 LDKGGANNGHSWADLFGPKYSPSPDLLFVPPKELNGKRVVVPDEDILEEGINLWRSSLVG 233
           L+K   ++  +WA LFG   S    L + PPK +  K VV+P E+++++GI +W +SLVG
Sbjct: 183 LNKLSNDSKSTWASLFGT--SSEESLFYTPPKAIGDKIVVIPPEEVIDQGIQVWENSLVG 242

Query: 234 QFIDARVPFSVVSYESFSFDRVPVWVKLSKLPLELWTTRGLSVVANAIGRPIGPRDDLPS 293
           Q IDA++P++V+              +L  + L+  T +   +    +   +    ++ +
Sbjct: 243 QLIDAKLPYAVIQ-------------RLKPISLDFATKKRRRLSYARVCVELEGGSNMSA 302

Query: 294 TVEVCIRGKNFVVAVDYSWKPKRCAPCGVFGHSSASCPESV---VVRDEVRVKPADLP-- 353
            + V +RG +F V+V+Y WKP++C  C  FGHSS+ C  SV    +++EV  K  D+   
Sbjct: 303 EITVSLRGVDFNVSVNYEWKPRKCNLCCAFGHSSSKCSRSVESKTIQEEVVHKGDDVDFE 362

Query: 354 -STSVPSTSAPPASGRRVSTSPSPRASPVDSKRVGPASPTKGVGSSSPSGHSSLGNS-FA 413
               V   S        + +SP+   S V+          KGVG S      +   S   
Sbjct: 363 LCGEVVLESFKQVEKGEIRSSPNRHDSQVE----------KGVGKSDEFTLVTRKKSELV 422

Query: 414 MLEGDNESVLAVVPAVWTS---SGGRVPWTFLLMTSWCSWNVRGLGDPA---KGLAVQSF 473
            +    +S+  ++P  + S    G    W   +        + G   P    +G  V S 
Sbjct: 423 SIRDRGKSMEVIMPNSFGSLLEVGDADKWALSI--------IEGSSPPLQVDEGTDVLSG 482

Query: 474 LQSSSVGFCCLLETKVKRHQFASVFDGFGSDWQCACSYGTSGLGRIWVMWRANRFSFVPI 533
           + SS VGFCCLLET+V+   F SV   F + W  +CSY  SG+GRIWVMW+ NRFSF   
Sbjct: 483 ISSSIVGFCCLLETRVREGNFDSVSRRFSNSWDYSCSYSNSGVGRIWVMWKKNRFSFSTH 542

Query: 534 FVRPQMINGTICDLSSQVSVEVVCVYASNSGGERRVLWDEILAVCLAWSSPGLVMGDFNA 593
            +  Q + GT+ DL S V VEV CVYASNS  ERR+LW  ++ +  AWSSPG+VM DFNA
Sbjct: 543 VMDEQFVTGTLTDLLSGVCVEVFCVYASNSNIERRLLWHRLVEITSAWSSPGVVMEDFNA 590

Query: 594 ICCSSEGFGGSPDLSEMEAFN 602
           I   SE F GSP   EME FN
Sbjct: 603 IRVHSEAFRGSPIQGEMEDFN 590

[Close]

BLAST of Spg035221 vs. ExPASy TrEMBL
Match: A0A5A7SPE5 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold581G00620 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 3.7e-61
Identity = 168/488 (34.43%), Postives = 244/488 (50.00%), Query Frame = 0


Query: 129 ASRTMQSRCDPKGKQVKDGADGDNGFVTVG--LGKRAIAGGGHSNSKLDKGGANNGHSWA 188
           A R    +CD  G ++       +G V  G  L  +         + L+K   ++  +WA
Sbjct: 137 AGRNFNGQCD-FGPRINSADLMKHGGVASGSILKNQGANVNNFVENDLNKLSNDSKSTWA 196

Query: 189 DLFGPKYSPSPDLLFVPPKELNGKRVVVPDEDILEEGINLWRSSLVGQFIDARVPFSVVS 248
            LFG   S    L + PPK +  K VV+P E+++++GI +W +SLVGQ IDA++P++V+ 
Sbjct: 197 SLFGT--SSEESLFYTPPKAIGDKIVVIPPEEVIDQGIQVWENSLVGQLIDAKLPYAVIQ 256

Query: 249 YESFSFDRVPVWVKLSKLPLELWTTRGLSVVANAIGRPIGPRDDLPSTVEVCIRGKNFVV 308
                        +L  + L+  T +   +    +   +    ++ + + V +RG +F V
Sbjct: 257 -------------RLKPISLDFATKKRRRLSYARVCVELEGGSNMSAEITVSLRGVDFNV 316

Query: 309 AVDYSWKPKRCAPCGVFGHSSASCPESV---VVRDEVRVKPADLP---STSVPSTSAPPA 368
           +V+Y WKP++C  C  FGHSS+ C  SV    +++EV  K  D+       V   S    
Sbjct: 317 SVNYEWKPRKCNLCCAFGHSSSKCSRSVESKTIQEEVVHKGDDVDFELCGEVVLESFKQV 376

Query: 369 SGRRVSTSPSPRASPVDSKRVGPASPTKGVGSSSPSGHSSLGNS-FAMLEGDNESVLAVV 428
               + +SP+   S V+          KGVG S      +   S    +    +S+  ++
Sbjct: 377 EKGEIRSSPNRHDSQVE----------KGVGKSDEFTLVTRKKSELVSIRDRGKSMEVIM 436

Query: 429 PAVWTS---SGGRVPWTFLLMTSWCSWNVRGLGDPA---KGLAVQSFLQSSSVGFCCLLE 488
           P  + S    G    W   +        + G   P    +G  V S + SS VGFCCLLE
Sbjct: 437 PNSFGSLLEVGDADKWALSI--------IEGSSPPLQVDEGTDVLSGISSSIVGFCCLLE 496

Query: 489 TKVKRHQFASVFDGFGSDWQCACSYGTSGLGRIWVMWRANRFSFVPIFVRPQMINGTICD 548
           T+V+   F SV   F + W  +CSY  SG+GRIWVMW+ NRFSF    +  Q + GT+ D
Sbjct: 497 TRVREGNFDSVSRRFSNSWDYSCSYSNSGVGRIWVMWKKNRFSFSTHVMDEQFVTGTLTD 556

Query: 549 LSSQVSVEVVCVYASNSGGERRVLWDEILAVCLAWSSPGLVMGDFNAICCSSEGFGGSPD 602
           L S V VEV CVYASNS  ERR+LW  ++ +  AWSSPG+VM DFNAI   SE F GSP 
Sbjct: 557 LLSGVCVEVFCVYASNSNIERRLLWHRLVEITSAWSSPGVVMEDFNAIRVHSEAFRGSPI 590

[Close]

BLAST of Spg035221 vs. ExPASy TrEMBL
Match: A0A5A7V5J2 (Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold387G00210 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 3.9e-55
Identity = 150/403 (37.22%), Postives = 203/403 (50.37%), Query Frame = 0


Query: 248 ESFSFDRVPVWVKLSKLPLELWTTRGLSVVANAIGRPI---------------------G 307
           ESF F+ VPVW++L ++P+ELWT   L++VA+ +G+PI                      
Sbjct: 50  ESFVFNSVPVWIRLGRIPMELWTEAWLAIVASVVGKPITLDLATKEHSRLSYARVCVKLE 109

Query: 308 PRDDLPSTVEVCIRGKNFVVAVDYSWKPKRCAPCGVFGHSSASCPESV---VVRDEV--R 367
              ++ + + V +RG +F V+V+Y WKP++C  C   GHS   CP SV   ++++EV  +
Sbjct: 110 GEFNMRAEITVNLRGVDFNVSVNYEWKPQKCNLCCAIGHSGGKCPRSVESKIIQEEVVSK 169

Query: 368 VKPA------DLPSTSVPSTSAPPASGRRVSTSPSPRASPVDSKRVG----------PAS 427
           + P         P   V   S        + +SP+   S V+ K VG            S
Sbjct: 170 IIPGKGEGVDSEPCAKVVLESFKQLEEGEIRSSPNRHGSHVE-KEVGKRDEFTLVTRKKS 229

Query: 428 PTKGVGSSSPSGHSSLGNSFAML--EGD-NESVLAVV----PAVWTSSGGRVPWTFLLMT 487
               V     S   ++ NSF  L   GD ++  L V+    P +    G           
Sbjct: 230 ELVSVRDRGKSIVVAMPNSFGSLLEVGDVDKWALTVIEGSPPPLQVDEG----------- 289

Query: 488 SWCSWNVRGLGDPAKGLAVQSFLQSSSVGFCCLLETKVKRHQFASVFDGFGSDWQCACSY 547
                   G+    K  AV  FL SSSVGFCCLLET+V+   F  V   FG+ W  +CSY
Sbjct: 290 -------TGVLSDLKSKAVSDFLGSSSVGFCCLLETRVRESNFDYVSRRFGNSWDYSCSY 349

Query: 548 GTSGLGRIWVMWRANRFSFVPIFVRPQMINGTICDLSSQVSVEVVCVYASNSGGERRVLW 602
             SG+GRIWV+W+ NRFSF    V  Q + GT+ DL S V VEV CVYASNS  ERR+LW
Sbjct: 350 SNSGVGRIWVVWKKNRFSFSTCVVDEQFVTGTLTDLLSGVCVEVFCVYASNSNIERRLLW 409

[Close]

BLAST of Spg035221 vs. ExPASy TrEMBL
Match: A0A5A7TWG5 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold284G00450 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 7.4e-54
Identity = 162/504 (32.14%), Postives = 225/504 (44.64%), Query Frame = 0


Query: 184 SWADLFGPKYSPSPDLLFVPPKELNGKRVVVPDEDILEEGINLWRSSLVGQFIDARVPFS 243
           +WA LFG   S    LL+  PK +  K VV P E ++++GI +W +SLVGQ ID+++P++
Sbjct: 295 TWASLFGT--SSEESLLYTLPKIIGDKIVVTPPEKVIDQGIKVWENSLVGQLIDSKLPYT 354

Query: 244 VVSY-------------------------------------------------------- 303
           V+ +                                                        
Sbjct: 355 VIQHLVEKIWGKIEMPIITILENDLICFQFRRSKSVEWILSRGPWHLDDKSMLLRKWTPG 414

Query: 304 ---ESFSFDRVPVWVKLSKLPLELWTTRGLSVVANAIGRPIG------------------ 363
              E F F+ VPVW++L KLP+ELWT  GL+VVA+A+G+PI                   
Sbjct: 415 IVPEFFVFNSVPVWIRLGKLPMELWTEAGLAVVASAVGKPISLDLATKERRRLSYARVCV 474

Query: 364 ---PRDDLPSTVEVCIRGKNFVVAVDYSWKPKRCAPCGVFGHSSASCPESV---VVRDEV 423
                 ++P+ + V +RG +F V+V+Y WKP++C  C  FGHS ++C  SV    +++EV
Sbjct: 475 ELEAGSNMPAEITVSLRGVDFNVSVNYEWKPRKCNLCCAFGHSGSNCSRSVESKTIQEEV 534

Query: 424 RVKPADL---PSTSVPSTSAPPASGRRVSTSPSPRASPVDSKRVGPASPTKGVGSSSPSG 483
             K  D+   P   V   S        +  SP+   S V+          KGVG S    
Sbjct: 535 VHKGDDVDSEPCGEVVLESFKQLEEGEIRNSPNRHNSQVE----------KGVGKS---- 594

Query: 484 HSSLGNSFAMLEGDNESVLAVVPAVWTSSGGRVPWTFLLMTSWCSWNVRGLGDPAKGLAV 543
                + F ++      +++V        G   P    L     +  + G+    K  AV
Sbjct: 595 -----DEFTLVTRRKSELVSVRDR--GKKGSPPP----LQVDEGTDILNGM----KSKAV 654

Query: 544 QSFLQSSSVGFCCLLETKVKRHQFASVFDGFGSDWQCACSYGTSGLGRIWVMWRANRFSF 602
             FL SSSVGFCCLLET+V+   F SV   F + W  +CSY  SG+GRIWVMW+ NRFSF
Sbjct: 655 VDFLGSSSVGFCCLLETRVREGNFDSVSKRFSNSWDYSCSYSNSGVGRIWVMWKKNRFSF 714

[Close]

BLAST of Spg035221 vs. TAIR 10
Match: AT2G07760.1 (Zinc knuckle (CCHC-type) family protein )

HSP 1 Score: 60.8 bits (146), Expect = 4.2e-09
Identity = 39/149 (26.17%), Postives = 67/149 (44.97%), Query Frame = 0


Query: 218 DILEEGI---NLWRSSLVGQFIDARVPFSVV-SYESFSFDRVPVWVKLSKLPLELWTTRG 277
           + +E+GI    LW       F+    P+S V +++      +PVWV L  +P  L++  G
Sbjct: 201 EFMEDGIPKRGLWHVDDCLMFV---APWSTVNTFDLPEISTIPVWVTLKNIPNRLYSILG 260

Query: 278 LSVVANAIGRPIG---PRDD-------------------LPSTVEVCIRGKNFVVAVDYS 337
           +S +A+ +G P+    PR D                    P    V  +G   +V V+Y+
Sbjct: 261 ISHIASGLGAPMATYKPRLDPSLMSEANILVEVELSKAFPPRIAAVDKKGNISMVNVEYA 320

Query: 338 WKPKRCAPCGVFGHSSASCPESVVVRDEV 341
           W P +C  CG  GH ++ C +  +  ++V
Sbjct: 321 WIPAKCGKCGQLGHKASRCMKPHLAHEKV 346

[Close]

BLAST of Spg035221 vs. TAIR 10
Match: AT2G01050.1 (zinc ion binding;nucleic acid binding )

HSP 1 Score: 50.8 bits (120), Expect = 4.4e-06
Identity = 32/103 (31.07%), Postives = 46/103 (44.66%), Query Frame = 0


Query: 256 PVWVKLSKLPLELWTTRGLSVVANAIGRPIGPRDDL---------------------PST 315
           PVWV+LS +P   +    L  +A  +GRP+  + D+                     P  
Sbjct: 165 PVWVRLSNIPYNYYHRCLLMEIARGLGRPL--KVDMNTINFDKGRFARVCIEVNLAKPLK 224

Query: 316 VEVCIRGKNFVVAVDYSWKPKRCAPCGVFGHSSASCPESVVVR 338
             V I G  + VA  Y    K C+ CG++GH   SCP +VVV+
Sbjct: 225 GTVLINGDRYFVA--YEGLSKICSSCGIYGHLVHSCPRNVVVK 263

The following BLAST results are available for this feature:

BLAST of Spg035221 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0060724.1	1.1e-62	35.64	hypothetical protein E6C27_scaffold72G00110 [Cucumis melo var. makuwa] >TYK01466...	[more]
TYK28099.1	5.3e-62	36.05	uncharacterized protein E5676_scaffold1467G00020 [Cucumis melo var. makuwa]	[more]
KAA0026071.1	7.6e-61	34.43	uncharacterized protein E6C27_scaffold581G00620 [Cucumis melo var. makuwa]	[more]
KAA0062888.1	8.1e-55	37.22	non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuw...	[more]
KAA0046247.1	1.5e-53	32.14	uncharacterized protein E6C27_scaffold284G00450 [Cucumis melo var. makuwa]	[more]

BLAST of Spg035221 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg035221 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V084	5.1e-63	35.64	Exo_endo_phos domain-containing protein/DUF4283 domain-containing protein OS=Cuc...	[more]
A0A5D3DXE4	2.6e-62	36.05	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A5A7SPE5	3.7e-61	34.43	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A5A7V5J2	3.9e-55	37.22	Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. mak...	[more]
A0A5A7TWG5	7.4e-54	32.14	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]

BLAST of Spg035221 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G07760.1	4.2e-09	26.17	Zinc knuckle (CCHC-type) family protein	[more]
AT2G01050.1	4.4e-06	31.07	zinc ion binding;nucleic acid binding	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	GENE3D	3.60.10.10	Endonuclease/exonuclease/phosphatase	coord: 438..605 e-value: 1.5E-15 score: 59.6
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 441..604
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 348..374
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 387..403
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 345..403
None	No IPR available	PANTHER	PTHR22748:SF11	DNA-(APURINIC OR APYRIMIDINIC SITE) LYASE CHLOROPLASTIC	coord: 391..598
IPR004808	AP endonuclease 1	PANTHER	PTHR22748	AP ENDONUCLEASE	coord: 391..598

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg035221.1	Spg035221.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006281	DNA repair
molecular_function	GO:0004518	nuclease activity