Spg034673 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCACAGAGGAACTAAACGAACTTCTTATATCCCTTTTCCACTCAATCCAGAAACAAGATCGGACGTTATTCCGGTTCGTCTCCATTTTAGTGAAACTATTTCTCAAGCAAGGCAGTCGATAAATCATCGAAGGGTTTGTGTGAATAAAGGAATGGTAAGCATTACTCATTTTAAAGTGTCCCACGGTGATGTAATATCTTTTCAAGAAAATGACGCGAGAATCCGTGGTGAAGAAATAAGGAGATCTTTCTATATCGAAATATCAGTTGAAAAAATCATAGGAAAATTCCTGGATCACCCGATAAGAATGTGGAGAAGAACTAAAACAGAATGGTTCCACCTACTCAAAACTAAGAGGGGATGCCGCCTACTACTAAAATCTCGGTTTTTGCAACAGTTGCGTTCTTCTATGCAAGAAGAAGACTTAGAAAGAACAAAGAAGTTTGGATCGGAAAAAGTATGCTTAGGCAGTTGCTTCGCTGAGCACAACAGAATGAAGAGGAATTTGTATCATTTGAAATCCCTATTCTTATCGAATAGAAGGAACGAGAAAAATCGAAATCTTCCTACTCGAACAAGAAGTCCTATAGTTTACAACTCTTCTTTATATAGTAATTCGACCGATTGCTCTGCATCCCCCCATCAGTTTACTATGAAGAGCAAAATCAAAAGGATCGAACTACCTACTCATTATTCGGAGGTGAATCATAGAACACTAAAAGTTGTGGTATCGTATGGACCTAACATAGGTCACATCCCTCACGACATAAGATTGAAAGATCCAAACCTTCCTCTTCGGAGCGGAAACGGACGTGGCCAAAACATATAAAGATCGGCGTAGTCGCTCATAGGGACATATCTATCCGTCTCGAGTCTCGTCTAGATCGATTCATAGATCGATTTCTATCCATATGTATCGGTATCCCTGTGGATAGAGATAAAGATATGGATCCATCTAGATCTTGATTCACTGTTTCAATTTTTTTGATTGATTGCCTTTTTTTTTACAACAAGTTTGAAATCTTAATGCAGGCAAGGAAAGAGAGTTTTTCTATTATTACTTGCAGGATCGGAGCGTAGACGAGCGAGCAGAGCCCAGGGAACGGGGAAGCCCTTCATAGAGCAGTCGACTAGAAGTAGAAGACTGCTGACCTGAGAGAAGACGGCCTCTCTCGGGAAACATGGCCTAATTTCTCTTCTTTCTTTTTGATTTCGGGTTTCTTTCTTTTTTCAGGGGCCCAGAACGCTTAAAGGTGGGGGAGAAGCAAGCCGAAACTCTGATCGACCTGGAAACATCACAAATTCTCGGCGTCGAGAGAGATTTGAGATTCCGTAAGTAACTCAGCGAGTGCTTTCTAAGAAGGGCTTGACTTGGAAGAAGAAAATGAAATACGAACAACCGCGCTGGTCGTAATAGATCGACTTTCATGCTAGTTCTTGCTCCAGCATGAAAGTTCCATTTCAGGGAAGGACGACGTACCATGATACTTTTCGTTTTGTCTAGCCCTGCTTTGGTCTCTGGTTTGATGGTTGTACGTGCTAAAAATTTGGTACATTCCGTTTTGTTTCCCATCCTAGTCTTTCGCAACACTTCAGGTTTACTTCTTTTGTTAGGTCTCGACTTCTTCGCTATGATCTTCCCAGTAGTTCATATAGGAGCTATAGCCGTTTCATTCCTATTCGTTGTTATGATTCATATTCAAATAGCGGAGATTCACGAAGAAGTCTTGCGCTATTTACCAGTGAGTGGTATTATTAGACTGATCTTTTGGTGGGAAATGCTCTTCATTTTAGATAATGAAACCATTCCATTACTACCAACCCAAAGAAATACGACCTCTCTGAGATATACGGTTTATGCCGGAAAGGTACGAAGTTGGACTAATTTGGAAACATTGGGCAATTTACTTTATACCTACTATTTCATCTGGTTTTGGTTTCTAGTCTGATTTTATTAGTAGCCATGATTGGGGCTATAGTACTGACTATGCATAGGACTACTAAGGTGAAAAGACAGGATGTATTCCGACGAAATGCTATTGATTTTAGGAGGACTATAATGAGGAGGACGACAGACCCACTCACGATCTACTAAAGGGAAAGTAGCTTGATTTGTTCGAATCCAAGTCGTGAGATGGCAGTAACGGTGAGGAAAAGGCGTAGGTTGGCTTGGCTTTGGCTTGCTCTGGTCATTATGGCGATTGATGATCCCTGTGCAAACAATAAGTCTGAGTCCCTTAAAAAACTCCCAGTGTATAAAGGAACGTTCGGGCCCCCCAGTCGTCGCAGGGGTCCCTCACTCGGGTATCAGGACGAGAAAGGATATAACGGTGCATTGAAAGATCCAACCGTAAAAAGGGAAACAGAAGGGGGGTTCTAAAAAGGAATCAAAATCGAAATGAAAGCGAAAACTAGTACAACAAGGAAATATGTGCTCCTAACCTTGACTCATGTGGAAATGAGACCAGAGATACAGAAGCATCATGTTACAGATAAGATAAGAGGGGTCTTCGAGAGTCGAGCTATTGTGGTAGTAAAGATCACACGAGGAGAGTGGAGACCATTTTCATGCGGGACTCATAGCAAAAGATGCCTCAAAGCAAACTTCCACGAAAAAGATGAGGGCAGGATTCCCGGAGCGGGAGGGGAGAATGAGGGATGTGAAATTCCACAAAAGGTGGGGAATTGTGTGTGCTTACGTTATGAAGAAAGATGAAGAACCTTGCATATGGAGGCAATATAATATAGATCAATTTAAGGAAATTGCCTTAGCCCGGAATAGGGGAAACCAAAGTTCAGTCTTAGAAAGTCTCGAGGGGTTAGAAGATTGGTACCAAGTGTATAGGGATGACCTTGTGAAAACGAGGATCTTAACCCGAGGATAAAAGAGGTTTTTGAGTCTTTCAAGATATTGCGTGATATAGAAAGCACCGTACCCGAAAGGATACAAAAATATCTGAAGGAGCATGGTGACCCCAAGGAGTACGACATTGAGGAACTAGGTGAGAAGTACCGACGGAAGAGATTGTCGCGGTCTCTTGTCAAATAA ATGCACAGAGGAACTAAACGAACTTCTTATATCCCTTTTCCACTCAATCCAGAAACAAGATCGGACGTTATTCCGGTTCGTCTCCATTTTAGTGAAACTATTTCTCAAGCAAGGCAGTCGATAAATCATCGAAGGGTTTGTGTGAATAAAGGAATGGGGCCCAGAACGCTTAAAGGTGGGGGAGAAGCAAGCCGAAACTCTGATCGACCTGGAAACATCACAAATTCTCGGCGTCGAGAGAGATTTGAGATTCCGGAAGGACGACGTACCATGATACTTTTCGTTTTGTCTAGCCCTGCTTTGGTCTCTGGTTTGATGGTTGTACGTGCTAAAAATTTGGTACATTCCGTTTTGTTTCCCATCCTAGTCTTTCGCAACACTTCAGGTTTACTTCTTTTGTTAGGTCTCGACTTCTTCGCTATGATCTTCCCAGTAGTTCATATAGGAGCTATAGCCGTTTCATTCCTATTCGTTGTTATGATTCATATTCAAATAGCGGAGATTCACGAAGAAGTCTTGCGCTATTTACCAGTGAGTGGTATTATTAGACTGATCTTTTGGTGGGAAATGCTCTTCATTTTAGATAATGAAACCATTCCATTACTACCAACCCAAAGAAATACGACCTCTCTGAGATATACGGTTTATGCCGGAAAGATGGCAGTAACGGTGAGGAAAAGGCGTAGGTTGGCTTGGCTTTGGCTTGCTCTGGTCATTATGGCGATTGATGATCCCTGTGCAAACAATAAGTCTGAGTCCCTTAAAAAACTCCCAGTGTATAAAGGAACGTTCGGGCCCCCCAGTCGTCGCAGGGGTCCCTCACTCGGATCACACGAGGAGAGTGGAGACCATTTTCATGCGGGACTCATAGCAAAAGATGCCTCAAAGCAAACTTCCACGAAAAAGATGAGGGCAGGATTCCCGGAGCGGGAGGGGAGAATGAGGGATGTGAAATTCCACAAAAGGTGGGGAATTGTGTGTGCTTACGTTATGAAGAAAGATGAAGAACCTTGCATATGGAGGCAATATAATATAGATCAATTTAAGGAAATTGCCTTAGCCCGGAATAGGGGAAACCAAAAAAGCACCGTACCCGAAAGGATACAAAAATATCTGAAGGAGCATGGTGACCCCAAGGAGTACGACATTGAGGAACTAGGTGAGAAGTACCGACGGAAGAGATTGTCGCGGTCTCTTGTCAAATAA ATGCACAGAGGAACTAAACGAACTTCTTATATCCCTTTTCCACTCAATCCAGAAACAAGATCGGACGTTATTCCGGTTCGTCTCCATTTTAGTGAAACTATTTCTCAAGCAAGGCAGTCGATAAATCATCGAAGGGTTTGTGTGAATAAAGGAATGGGGCCCAGAACGCTTAAAGGTGGGGGAGAAGCAAGCCGAAACTCTGATCGACCTGGAAACATCACAAATTCTCGGCGTCGAGAGAGATTTGAGATTCCGGAAGGACGACGTACCATGATACTTTTCGTTTTGTCTAGCCCTGCTTTGGTCTCTGGTTTGATGGTTGTACGTGCTAAAAATTTGGTACATTCCGTTTTGTTTCCCATCCTAGTCTTTCGCAACACTTCAGGTTTACTTCTTTTGTTAGGTCTCGACTTCTTCGCTATGATCTTCCCAGTAGTTCATATAGGAGCTATAGCCGTTTCATTCCTATTCGTTGTTATGATTCATATTCAAATAGCGGAGATTCACGAAGAAGTCTTGCGCTATTTACCAGTGAGTGGTATTATTAGACTGATCTTTTGGTGGGAAATGCTCTTCATTTTAGATAATGAAACCATTCCATTACTACCAACCCAAAGAAATACGACCTCTCTGAGATATACGGTTTATGCCGGAAAGATGGCAGTAACGGTGAGGAAAAGGCGTAGGTTGGCTTGGCTTTGGCTTGCTCTGGTCATTATGGCGATTGATGATCCCTGTGCAAACAATAAGTCTGAGTCCCTTAAAAAACTCCCAGTGTATAAAGGAACGTTCGGGCCCCCCAGTCGTCGCAGGGGTCCCTCACTCGGATCACACGAGGAGAGTGGAGACCATTTTCATGCGGGACTCATAGCAAAAGATGCCTCAAAGCAAACTTCCACGAAAAAGATGAGGGCAGGATTCCCGGAGCGGGAGGGGAGAATGAGGGATGTGAAATTCCACAAAAGGTGGGGAATTGTGTGTGCTTACGTTATGAAGAAAGATGAAGAACCTTGCATATGGAGGCAATATAATATAGATCAATTTAAGGAAATTGCCTTAGCCCGGAATAGGGGAAACCAAAAAAGCACCGTACCCGAAAGGATACAAAAATATCTGAAGGAGCATGGTGACCCCAAGGAGTACGACATTGAGGAACTAGGTGAGAAGTACCGACGGAAGAGATTGTCGCGGTCTCTTGTCAAATAA MHRGTKRTSYIPFPLNPETRSDVIPVRLHFSETISQARQSINHRRVCVNKGMGPRTLKGGGEASRNSDRPGNITNSRRRERFEIPEGRRTMILFVLSSPALVSGLMVVRAKNLVHSVLFPILVFRNTSGLLLLLGLDFFAMIFPVVHIGAIAVSFLFVVMIHIQIAEIHEEVLRYLPVSGIIRLIFWWEMLFILDNETIPLLPTQRNTTSLRYTVYAGKMAVTVRKRRRLAWLWLALVIMAIDDPCANNKSESLKKLPVYKGTFGPPSRRRGPSLGSHEESGDHFHAGLIAKDASKQTSTKKMRAGFPEREGRMRDVKFHKRWGIVCAYVMKKDEEPCIWRQYNIDQFKEIALARNRGNQKSTVPERIQKYLKEHGDPKEYDIEELGEKYRRKRLSRSLVK Homology
BLAST of Spg034673 vs. NCBI nr
Match: TXG46253.1 (hypothetical protein EZV62_028284 [Acer yangbiense]) HSP 1 Score: 357.8 bits (917), Expect = 1.2e-94 Identity = 194/221 (87.78%), Postives = 202/221 (91.40%), Query Frame = 0
BLAST of Spg034673 vs. NCBI nr
Match: MBA0757956.1 (hypothetical protein [Gossypium trilobum]) HSP 1 Score: 265.8 bits (678), Expect = 6.2e-67 Identity = 147/162 (90.74%), Postives = 151/162 (93.21%), Query Frame = 0
BLAST of Spg034673 vs. NCBI nr
Match: PWA38432.1 (NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 [Artemisia annua]) HSP 1 Score: 226.9 bits (577), Expect = 3.2e-55 Identity = 128/154 (83.12%), Postives = 136/154 (88.31%), Query Frame = 0
BLAST of Spg034673 vs. NCBI nr
Match: KJB09804.1 (hypothetical protein B456_001G168000, partial [Gossypium raimondii]) HSP 1 Score: 225.3 bits (573), Expect = 9.2e-55 Identity = 125/136 (91.91%), Postives = 128/136 (94.12%), Query Frame = 0
BLAST of Spg034673 vs. NCBI nr
Match: XP_039833224.1 (NADH-ubiquinone oxidoreductase chain 6 [Panicum virgatum] >XP_039833294.1 NADH-ubiquinone oxidoreductase chain 6 [Panicum virgatum] >KAG2481378.1 hypothetical protein PVAP13_J668200 [Panicum virgatum]) HSP 1 Score: 224.6 bits (571), Expect = 1.6e-54 Identity = 124/141 (87.94%), Postives = 130/141 (92.20%), Query Frame = 0
BLAST of Spg034673 vs. ExPASy Swiss-Prot
Match: Q02500 (NADH-ubiquinone oxidoreductase chain 6 OS=Triticum aestivum OX=4565 GN=ND6 PE=3 SV=1) HSP 1 Score: 218.8 bits (556), Expect = 1.1e-55 Identity = 122/141 (86.52%), Postives = 128/141 (90.78%), Query Frame = 0
BLAST of Spg034673 vs. ExPASy Swiss-Prot
Match: P60498 (NADH-ubiquinone oxidoreductase chain 6 OS=Brassica campestris OX=3711 GN=ND6 PE=2 SV=1) HSP 1 Score: 217.6 bits (553), Expect = 2.5e-55 Identity = 120/131 (91.60%), Postives = 124/131 (94.66%), Query Frame = 0
BLAST of Spg034673 vs. ExPASy Swiss-Prot
Match: P60497 (NADH-ubiquinone oxidoreductase chain 6 OS=Arabidopsis thaliana OX=3702 GN=ND6 PE=1 SV=1) HSP 1 Score: 202.2 bits (513), Expect = 1.1e-50 Identity = 116/131 (88.55%), Postives = 121/131 (92.37%), Query Frame = 0
BLAST of Spg034673 vs. ExPASy Swiss-Prot
Match: P26850 (NADH-ubiquinone oxidoreductase chain 6 OS=Marchantia polymorpha OX=3197 GN=ND6 PE=2 SV=2) HSP 1 Score: 154.5 bits (389), Expect = 2.6e-36 Identity = 93/132 (70.45%), Postives = 107/132 (81.06%), Query Frame = 0
BLAST of Spg034673 vs. ExPASy Swiss-Prot
Match: Q37626 (NADH-ubiquinone oxidoreductase chain 6 OS=Prototheca wickerhamii OX=3111 GN=ND6 PE=3 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 2.1e-25 Identity = 66/121 (54.55%), Postives = 94/121 (77.69%), Query Frame = 0
BLAST of Spg034673 vs. ExPASy TrEMBL
Match: A0A5C7GNW2 (S4 RNA-binding domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_028284 PE=3 SV=1) HSP 1 Score: 357.8 bits (917), Expect = 5.8e-95 Identity = 194/221 (87.78%), Postives = 202/221 (91.40%), Query Frame = 0
BLAST of Spg034673 vs. ExPASy TrEMBL
Match: A0A5C7GQ79 (S4 RNA-binding domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_027769 PE=3 SV=1) HSP 1 Score: 279.3 bits (713), Expect = 2.6e-71 Identity = 155/179 (86.59%), Postives = 162/179 (90.50%), Query Frame = 0
BLAST of Spg034673 vs. ExPASy TrEMBL
Match: A0A7J9DB23 (Uncharacterized protein (Fragment) OS=Gossypium trilobum OX=34281 GN=Gotri_020999 PE=3 SV=1) HSP 1 Score: 265.8 bits (678), Expect = 3.0e-67 Identity = 147/162 (90.74%), Postives = 151/162 (93.21%), Query Frame = 0
BLAST of Spg034673 vs. ExPASy TrEMBL
Match: A0A2U1KNW6 (NAD(P)H dehydrogenase subunit 6 OS=Artemisia annua OX=35608 GN=CTI12_AA581450 PE=3 SV=1) HSP 1 Score: 226.9 bits (577), Expect = 1.5e-55 Identity = 128/154 (83.12%), Postives = 136/154 (88.31%), Query Frame = 0
BLAST of Spg034673 vs. ExPASy TrEMBL
Match: A0A0D2PSI1 (Uncharacterized protein (Fragment) OS=Gossypium raimondii OX=29730 GN=B456_001G168000 PE=3 SV=1) HSP 1 Score: 225.3 bits (573), Expect = 4.5e-55 Identity = 125/136 (91.91%), Postives = 128/136 (94.12%), Query Frame = 0
BLAST of Spg034673 vs. TAIR 10
Match: ATMG00270.1 (NADH dehydrogenase 6 ) HSP 1 Score: 217.6 bits (553), Expect = 1.8e-56 Identity = 120/131 (91.60%), Postives = 124/131 (94.66%), Query Frame = 0
BLAST of Spg034673 vs. TAIR 10
Match: AT2G07734.1 (Alpha-L RNA-binding motif/Ribosomal protein S4 family protein ) HSP 1 Score: 99.4 bits (246), Expect = 7.1e-21 Identity = 46/52 (88.46%), Postives = 48/52 (92.31%), Query Frame = 0
BLAST of Spg034673 vs. TAIR 10
Match: ATMG00290.1 (mitochondrial ribosomal protein S4 ) HSP 1 Score: 99.4 bits (246), Expect = 7.1e-21 Identity = 46/52 (88.46%), Postives = 48/52 (92.31%), Query Frame = 0
BLAST of Spg034673 vs. TAIR 10
Match: AT2G07718.1 (Cytochrome b/b6 protein ) HSP 1 Score: 55.1 bits (131), Expect = 1.5e-07 Identity = 36/70 (51.43%), Postives = 45/70 (64.29%), Query Frame = 0
BLAST of Spg034673 vs. TAIR 10
Match: ATMG00590.1 (Cytochrome b/b6 protein ) HSP 1 Score: 55.1 bits (131), Expect = 1.5e-07 Identity = 36/70 (51.43%), Postives = 45/70 (64.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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