Spg034319 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg034319
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTransposon Ty3-I Gag-Pol polyprotein
Locationscaffold12: 21746983 .. 21753694 (-)
RNA-Seq ExpressionSpg034319
SyntenySpg034319
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGAACTCGGATTCTCCCTCGACGTGGCTGGCATTGTCGAAAAAGGAGTTTGAGCGTTGGGCTCTTGGTTCACGATCGCTGGCGAGAAACCTGTGGGTCTCGTCCTTCTCGTGCCGTGCATGGGTGTTTTGGGGTTCTCTTCTTGCCGTCGAACACTTGCTTCAACTTCGTGGGTGGTTGGATTACTCTAGGATCGAGTGATCTTGCGTGATGATGATGGTTTGGGCGAATTCTTCATGGTTCTTTGATGTGGGTTTTCGGGTTTCAAGATGAGAGAATATGGAGAGTTGGAGTTTTGACTTGAATGCAAAAGAGTTGAGTGGTTGGTGAAAAGGGAAAGACTATAAGTCAGCTATTTATAGTTTTCTAATTAGGTCACGTGCTGGTCAAAAGAAATTCATGACTGCCCTCTTATTTTTGAAAATGCGGTCGCATTCCCAAATACACTGGGAGAAATGCGATGGCATTTGCCCCAGTTCTTCTGCCTTTTTTTTTCTTGACTTTTCTCTTTCCTTTGCTTTTCTCTCTTTACTGAAACAATCGAGCGAAGGGAGTTAGATCGGCCTTAACTCATCTAAGAATGAGAGGAAACGAGAGCTTACTGATAGCGAGCGTAGCAAGCTATTTTTCCTTAATTAATTTAGTTAGTAATTTATATTATTTTGGCCAAATTTATGCATTTTTATGTTCTATTTGTAGGAATCTTGTTTTGGAGTTAAATCGAGAAAATGGGATTGATTGGGTGTTCGGGACGCAAAAAGATTCCAAAGAAACGAAGTGAATCGAAGTTGGAACCTTGTTGATGAGTACAATCTGTGAGCCAGCGTCGAGACCCTAGTTTCTGGGTGTCTCGACGCTGGAATTTTCCTTATTTTATTCAAGCAGAAAAAAGCACAGCGTCGAGACACTGTGCTAGAGCTTCTCGACGCTCTTGGAATTTTCCTAAACAGAATGCACGGTTTGCGACAGCATCGCGATGCTGTGCCTATAGCGTCTCGACGCTGTTGACAATTTCCCTATAAATAGAATGCGATTAGGGTTAGCCAAGAGGACTTCTTTTGATGCAATTTTCGCCTAAACTTGACTAAATACCTTCTGTGGGAGCTGAAGCAAGTTCAAGGAGTGGGATTTGAAGGCTTTGCTCGTGGAGATCGTGACGGGGACGTGCGGTTTCGGCAACAATAGTGTTTAATTCCCTTTCTCTCTTATCTTTAGTAGTTTTAATGGCTGTTTTAGACTTAGCTTATATCGTAACGTGTTGTATGAGTAGCTAGGTTTATTATCTTAAGGATTGATGTAGGCCTTTGGTCAATTATGGATTCATTTGTGGATGTATGCTATGCTTTCATTTATGCATAATTCTTCCTTAATGCTTTCAATTTATTGACCATGATTGAATGATGATTGTGTCTAAATCTTGCTCAGGAGAGGGGGTTTAGCTTAGATATCGTTATGCATAACTAGGATAGTCTTGAGATCGGGAGATAAAAGATAATTCTAGAAATCGTTAAAAATGATAACCTTAATGTCTTGCATGTTAATGAATTTAGATAGGGATATTGGATTCATTGCATGTGAGAGAATTATGTATGATCGGGAGAGATATATATGATTTAAGCATTCCTAAATTTACGAATCATAGCATGGTAATCATCCATTAATTGATTCATAATCCCAATTGGTGAAATCAACTCCCTAAGAACTTGCCATCATTTGATTACCATATTTTTAGCTTTGTGTTAATTTACCACTCTTTTTCACTAAAAATTGTTCCCTAGATAAAATTGGACTTGAGTTTTTACGGTAATTAAATTGATTAGAAACCCAATCCAGAGGACGACATTCGATTTAAAAATCATTATGTGTTAACTTAGGGAGTTGATCCTCTAACGATTGTCGATTTAAAATTTTTAAACCCAAAGATAATCAAAATTTTGATTCCTTGAATCCAACAATTTCCTAAACATATCCAATACTTCTCTAATTAGAAACCAACAAATTCATCTTAAAGGTCTAATGAACAACCCAAATGACATAGAACTTATACTACCAATTTTTCCCACTTAAACCAAATTCTCTTCATTAAAAGTTGTGAAAATAGGTTCATTGGGTGGCAAAAACAGCACTGAAAATTTGGAAAATTTCACTTTAAAATTCAACTTTTTCATACCAAAAATCAGTAAAACAAATACCTTTCAATACCATTTAAATACAAAACAAGATTTCAATTTATCAATCTTTAAAACCTTCAAAACTATCTTAAAATTGGGACAAATAACCCAGAAAATTCCTACAACAAAAATAAAGATTTTCCAAGCTTTTAACACTAAAACAAATCAATATTGACTACTTTTAAATACAAAAACCAGATCTGAAGTACACAATAAAACTCCTTTAAAACAGTAGAAACATTCCCTTTTTATTGAAATTAACAAAAAGATTCCACTTTAAACACAAAAGCAGCCCAAAATTAAGGAAATTTAAGGCTGAAAAGTTCTAGAAAATTTTGGAAATTTTTCCTTTTACCAAATCTTTGATTTCAAACAAAAACCCTAAGAGGAAAAACTTTGATAAAAAATTTAGGTCAAAACAAAAACCTAAAACTTTTTAGGGCAAAAGGTTTGAAAACCAATTTCCTCTCAAATAGGACAAATAAAACTTCATACTAACGCTTATCAAAAATAAAATTCAATTGATCGAAAAGAAAACAAAACAAAAGAAAAGCGATACGCCACTACATCCTCCTTTTCGAAAATTTCAAAAGGTTCAATAAACCTTGGACTAAGCTTCCCTCTCTTCCCAAATCTCACAATTCCTTTCAATGGTAACACTTTCAAGAACACCATATCTCCAACTTCAAAATTTAATTCCTTTCTTCTGGCATCAACATTACTTTTCTGGCGACTTTGAGTTTTCTCCATTCTCTACTTGATTAAGTCAATGGGCTCATTAGCCTTTGCAACTTTTCCAAAAATTTAGATGCAGACTTTAGAACTCAATCTTGACTTTATAGAGACAGATTCACCATGAAGCTTAATTGTCTTTCGAATATAAATTTGAGCTCATATCTTTGCTGTATTAGCAGACTTTCCAGGACTTTGCTAAATGGTCAATAATAACCCACACAGTCTCAAACCCTAACTGTGTCTTAGATAGTCCAATCACAAAATCCATTAAGATATTTTCCCATTTCCAGACTGGGATATCCAATGGTTGGAGAGGTCCTGACGGTCTTTGATGTTCAATCTTCACCTATCGGCACGTTAAACAATGATTAACGAAGCTGGCAACCTCTCGTTTCATTCCTGGCCACCAAAACACCCTTCGAAGATCTCGATACATCTTTGTATTCCCAAGGTGAACTGAATAAAGAGTACTATGACCTTCTGTCATAATCTCCTTCTTAATAGCTGGGTCATTAGGAACACAAAGACGATCACCCATCCACAAACCTCCATCACGTGATACTGAAAACTCGGATTTCTTACCCATGCTAACATCATCAACAATTCTTCTCAAAGTTGAGTCTAAACTTTGAGCATGCTTGATCTTATTAACAAATGATGATTCAACCGTTAGATTAGCCAACAATGATGTTATATCTTCTGAAGTCACATCGATGTCTAGCTTTCCAAAATCATGGATCAACTGCTCTTGAGTTGTGATTAAAGCTGCTGAAAATGAAGACTTTCTACTAAGAGCATTGATAACTCTCCAAAAGGGAGTTATTTAGACCTTATTTCTAGATGGATTTGTGTGTCTTTTGTGCTAAATAGGGTTGCTTTTAGATATATATTGCTTGTTCTAACCCATTTGGAAGAATGGATGCTTTGGAAGTTATTTTGTGCAGAATATATTATTGAGTGACTAGAGGGAGCAAATTTTGTGCTGCAACAAAGCTGGGAGCAAAACTGCCACGTCACAGCTCGTTAGCCAATTTAATGAGCCGAAGTTTGTTGAGCTATTCTCAGATTTAAGAAGCTTGGAAAGCCTGCCACGTGTCCAAATTGACCTAATTAGGCCTTGCTATCACTCTATAAAAGGAGAGGCCGTCTCAAGTCAAATGGATTCCGTTCTTGGGAGGAACATTCCACTCTTGGAAAGTTCATTTCCATTATTTGGAGCCGAATAGAGGAGAAAGATTGGGACCTACAAGAAGACCATCAATTACGAAGTTGATCAAGGGAATTAGTATTTTCTTGTATTATTTTGTAATTATGGATGCATTTACTCAGATTGTAACGTGTGTCTCTATGCACTTTATGAACTAAGTAATTTTAGGTGTTGGTTAGGAAATATGTAATTGTCGTGCTTAATCTCTACGCAATATAAGTTGATTTGATGCATCTTGATTATTTGTTGTGCTAATTTATATTTTGTGCCCGCTTGGCCAGCCGGTATGAATACCACTTCCTAGTTTCAGGGATGATTAGGGAAGTGTGTGGCATTTAATCACACTAGATCATTGTGTATTGGTGAACGCCAGTGACTGAGCTAGGGATAGCCAGTTGCCTAGTGCTTGATCGGTAGTGCTTCATTGGAGTTGAAACACATTCTAAAAAATCCAGAGTTCTGGGAGGAATCTGCTAATAGGACTGCAAAAGTTTTGCATGATCAATAATATTGCTAGAGCATCTTTTAAAACAATTACTAAATCCTGACCAGCGTCTGTTTCTAATCTGTCTACTTTATTTGTTTACTTTATGTTCTGTCATTTCTTTTGCTTCAGCATTTTAAAAACCAATCATTTTAACCACCTTTGAAACCATTGAAAAGTTATACAAAATAGATAAAGTGAGAACTAATTCATACCTTGGATTTGATAAATACTTATTACTTGCTGCGGACTGTGTATACTTGCACAAAGTTCTAGAGTCTATTTCTTACTACATTTTCACCCACTCTGGAAACCCAACAAGTTTTTGGCGTCATTGGCGGGGACTTGAATAAGTTTTTATCTGATCTGTTTTGTGTATGTGTTTTAGTGGTTTGGTGCTAGAACTTTTTGATTGTTTCTTTTGTTTTTGCAGGTGTGAGTTTGGTGCATGAGCGATCCGCCTGGGGTAAGGTTCGAGCTTGATCCAGAAATCGAGAGGACATTTAGGAGAAGAAGGAGAAAGCAGCGTAGAAACCAAAATTCAATGGCTGATGTGCCACGTCTCCCGTAGGGTCCAGAAGATCCAGCGAACCCCCAGCAAAATCGTTTGTTGTAGCAAAACCAGCCGCTGGAGCAAAATGGACAGCAAAATAATCAGGAAGAGAATCCTATCTTGGCAGCAAACGATAGGGCTAGAGCCATTCGAGTGTATGCTTTTCCAATGTTTGATGAGTTAAATCTAGGGATTGCACGTCCTCAAATTGAGGCAACAAATTTTGAAATGAAACCGGTAATGTTTCAGATGTTGCAAACCGTGGGTCAGTTTCATGGTTTGTCATCTGAAGACCCTCATTTACATCTTAAGTCTTTTCTAGGAGTTAGTGATTCTTTTGTAATTCAAGGAGTGCCTAGAGATGCCCTCAGATTAACTTTGTTCCCGTATTCTCTTAGAGATGCAGCAAAGGCATGGTTAAATTCTTTTGCTCCAAGATCAATTAGGACATGGAATGAGTTAGCAGAAAAATTTTGAGTAAATATTTCCCACCAAATAGGAATGCTAAATTGAGGAGTGAAATAGTAGGGTTTAGGCAACTTGAGGATGAAACTTTTAGTGAGGCTTGGGAGAGGTTTAAGGAGCTTTTGTGAAAGTGTCCCCTCCATGGTTTACCACATTGTATCCAAATGGAAACATTTTACAATGGGTTAAATGGAGCAACCCAAGGTATGGTTGATGCTTCGGCTGGAGGGGCCCTTTTGGAAAAAACTTTTAATGAAGCCCATGAAACTTTAGAGAGAATATCAACTAATAGTTGTCAGTGGTCAAATGTTAGAGGCACAAATAAAAAGGTTAAAAGTGTGTTAGAGGTTGATGGTGTGTCCACCATTAGGGCTGATATTGCAATGTTAGCTAACGCTCTTAAAAATGTGACAGTGGTTAGTCATCAGCAGCCGCCAGCTATGGAGCTTGCTGCAGTGGTGAACCAAGTTCCAAAGGAATCTTGTGTCTATTGTGGTGAAGAGCACAACTACGAGTTTTGCCCTAGCAATCTAGCTTCTGTGTTTTTTGTAGGTAATCAGAGCAACAACCCTTATTCTAACTTTTACAGTCCAGGTTGGCGCAACCATCCCAACTTCGCATGGGGAGAACAAGGAAGTAATGTGCAAGCACAGCCAAAGGTGAACCAGTCGGGATTTGCTAAAGCACAGGTAATGCCCCAGCAAAATAAGCAGGCTTTGCCCTAGCAAAATTCGGAGAGTTCTCTTGAGGCAATGATGAAAGAATATATGGCTCGAACAGACGCCACAATTCAAAGTAATCAAGCTTCAATGAGAGCCCTGGAATTGCAGGTGGGCCAGCTAGCTAATGAGCTGAAGGCAAGGCCTCAAGGGAAACTTCCTTCAGATACTAAACACCCTAGAAGGGAAGGTAAGGAGCAGGTAAAAGCAGTGACTCTAAGGAGTGGTCAGCCACTAGAAGAGAGAAAAGAGCCTAGTAAACCCCAGGATGTAGGAAAGAATTGTGATAAAAATGTTGTTGATGAGAAAGAGTTAGAGTCTGGTCAGGGTGCTGGAGGATGTAGGATAGTTTCTGTAGGTTGCGCTAGAATGTAA

mRNA sequence

ATGACGAACTCGGATTCTCCCTCGACGTGGCTGGCATTGTCGAAAAAGGAGTTTGAGCGTTGGGCTCTTGGTTCACGATCGCTGGCGAGAAACCTGTGGGTCTCGTCCTTCTCGTGCCGTGCATGGGTGTTTTGGGGTTCTCTTCTTGCCGTCGAACACTTGCTTCAACTTCGTGGGTGCGTCGAGACCCTAGTTTCTGGGTGTCTCGACGCTGGAATTTTCCTTATTTTATTCAAGCAGAAAAAAGCACAGCGTCGAGACACTGTGCTAGAGCTTCTCGACGCTCTTGGAATTTTCCTAAACAGAATGCACGGTTTGCGACAGCATCGCGATGCTCTGAAGCAAGTTCAAGGAGTGGGATTTGAAGGCTTTGCTCGTGGAGATCGTGACGGGGACAGGGAGCAAATTTTGTGCTGCAACAAAGCTGGGAGCAAAACTGCCACGTCACAGCTCGTTAGCCAATTTAATGAGCCGAAGTTTGTTGAGCTATTCTCAGATTTAAGAAGCTTGGAAAGCCTGCCACGTGTCCAAATTGACCTAATTAGGCCTTGCTATCACTCTATAAAAGGAGAGGCCGTCTCAAGTCAAATGGATTCCGTTCTTGGGAGGAACATTCCACTCTTGGAAAGTGTGAGTTTGGTGCATGAGCGATCCGCCTGGGTGGTTAGTCATCAGCAGCCGCCAGCTATGGAGCTTGCTGCAGTGGTGAACCAAGTGGGCCAGCTAGCTAATGAGCTGAAGGCAAGGCCTCAAGGGAAACTTCCTTCAGATACTAAACACCCTAGAAGGGAAGGTAAGGAGCAGGTAAAAGCAGTGACTCTAAGGAGTGGTCAGCCACTAGAAGAGAGAAAAGAGCCTAGTAAACCCCAGGATGTAGGAAAGAATTGTGATAAAAATGTTGTTGATGAGAAAGAGTTAGAGTCTGGTCAGGGTGCTGGAGGATGTAGGATAGTTTCTGTAGGTTGCGCTAGAATGTAA

Coding sequence (CDS)

ATGACGAACTCGGATTCTCCCTCGACGTGGCTGGCATTGTCGAAAAAGGAGTTTGAGCGTTGGGCTCTTGGTTCACGATCGCTGGCGAGAAACCTGTGGGTCTCGTCCTTCTCGTGCCGTGCATGGGTGTTTTGGGGTTCTCTTCTTGCCGTCGAACACTTGCTTCAACTTCGTGGGTGCGTCGAGACCCTAGTTTCTGGGTGTCTCGACGCTGGAATTTTCCTTATTTTATTCAAGCAGAAAAAAGCACAGCGTCGAGACACTGTGCTAGAGCTTCTCGACGCTCTTGGAATTTTCCTAAACAGAATGCACGGTTTGCGACAGCATCGCGATGCTCTGAAGCAAGTTCAAGGAGTGGGATTTGAAGGCTTTGCTCGTGGAGATCGTGACGGGGACAGGGAGCAAATTTTGTGCTGCAACAAAGCTGGGAGCAAAACTGCCACGTCACAGCTCGTTAGCCAATTTAATGAGCCGAAGTTTGTTGAGCTATTCTCAGATTTAAGAAGCTTGGAAAGCCTGCCACGTGTCCAAATTGACCTAATTAGGCCTTGCTATCACTCTATAAAAGGAGAGGCCGTCTCAAGTCAAATGGATTCCGTTCTTGGGAGGAACATTCCACTCTTGGAAAGTGTGAGTTTGGTGCATGAGCGATCCGCCTGGGTGGTTAGTCATCAGCAGCCGCCAGCTATGGAGCTTGCTGCAGTGGTGAACCAAGTGGGCCAGCTAGCTAATGAGCTGAAGGCAAGGCCTCAAGGGAAACTTCCTTCAGATACTAAACACCCTAGAAGGGAAGGTAAGGAGCAGGTAAAAGCAGTGACTCTAAGGAGTGGTCAGCCACTAGAAGAGAGAAAAGAGCCTAGTAAACCCCAGGATGTAGGAAAGAATTGTGATAAAAATGTTGTTGATGAGAAAGAGTTAGAGTCTGGTCAGGGTGCTGGAGGATGTAGGATAGTTTCTGTAGGTTGCGCTAGAATGTAA

Protein sequence

MTNSDSPSTWLALSKKEFERWALGSRSLARNLWVSSFSCRAWVFWGSLLAVEHLLQLRGCVETLVSGCLDAGIFLILFKQKKAQRRDTVLELLDALGIFLNRMHGLRQHRDALKQVQGVGFEGFARGDRDGDREQILCCNKAGSKTATSQLVSQFNEPKFVELFSDLRSLESLPRVQIDLIRPCYHSIKGEAVSSQMDSVLGRNIPLLESVSLVHERSAWVVSHQQPPAMELAAVVNQVGQLANELKARPQGKLPSDTKHPRREGKEQVKAVTLRSGQPLEERKEPSKPQDVGKNCDKNVVDEKELESGQGAGGCRIVSVGCARM
Homology
[Close]
BLAST of Spg034319 vs. NCBI nr
Match: XP_030497589.1 (uncharacterized protein LOC115713246 [Cannabis sativa])

HSP 1 Score: 73.2 bits (178), Expect = 4.7e-09
Identity = 41/79 (51.90%), Postives = 53/79 (67.09%), Query Frame = 0 

Query: 226 QPPAMELAAVVNQVGQLANELKARPQGKLPSDTKHPRREGKEQVKAVTLRSGQPL----E 285
           Q  A  +  + NQVGQL NEL+ RPQG LPSDT++PRR+GKE  KAV LRSG+ L    E
Sbjct: 221 QSQATSMRTLENQVGQLVNELRNRPQGTLPSDTENPRRDGKEHCKAVILRSGKVLESNEE 280

Query: 286 ERKEPSKPQDVGKNCDKNV 301
           E K+ ++P  +    +KNV
Sbjct: 281 EAKDKNEPTSIQSRVEKNV 299

[Close]
BLAST of Spg034319 vs. NCBI nr
Match: XP_030508913.1 (uncharacterized protein LOC115723563 [Cannabis sativa])

HSP 1 Score: 72.8 bits (177), Expect = 6.2e-09
Identity = 40/68 (58.82%), Postives = 50/68 (73.53%), Query Frame = 0 

Query: 237 NQVGQLANELKARPQGKLPSDTKHPRREGKEQVKAVTLRSGQPL----EERKEPSKPQDV 296
           NQVGQLANEL+ RPQG LPSDT++PRR+GKE  KAV LRSG+ L    EE K+ ++P  +
Sbjct: 6   NQVGQLANELRNRPQGTLPSDTENPRRDGKEHCKAVILRSGKVLESNEEEAKDKNEPTSI 65

Query: 297 GKNCDKNV 301
               +KNV
Sbjct: 66  QSRVEKNV 73

[Close]
BLAST of Spg034319 vs. NCBI nr
Match: XP_030483210.1 (uncharacterized protein LOC115699807 [Cannabis sativa])

HSP 1 Score: 71.6 bits (174), Expect = 1.4e-08
Identity = 38/66 (57.58%), Postives = 49/66 (74.24%), Query Frame = 0 

Query: 226 QPPAMELAAVVNQVGQLANELKARPQGKLPSDTKHPRREGKEQVKAVTLRSGQPLEERKE 285
           Q  A  +  + NQVGQLANEL+ RPQG LPSDT++PRR+GKE  KAV LRSG+ LE  +E
Sbjct: 384 QSQATSMRTLENQVGQLANELRNRPQGTLPSDTENPRRDGKEHCKAVILRSGKVLESNEE 443

Query: 286 PSKPQD 292
            +K ++
Sbjct: 444 IAKDKN 449

[Close]
BLAST of Spg034319 vs. NCBI nr
Match: XP_030502450.1 (uncharacterized protein LOC115717606 [Cannabis sativa])

HSP 1 Score: 70.9 bits (172), Expect = 2.4e-08
Identity = 50/156 (32.05%), Postives = 80/156 (51.28%), Query Frame = 0 

Query: 137 LCCNKAGSKTATSQLVSQFN-EPKFVELFSDLRSLESLPRVQIDLIRPCYHSIKGEAVSS 196
           L     G+ T+ S ++ + N +P F +     R  + +    ++ +  C   +K E   +
Sbjct: 56  LAYRNQGAGTSNSSMLPRSNFQPGFSQQAFKQRQQQGVQTSSLESMM-CDFMVKTENFMT 115

Query: 197 QMDSVLGRNIPLLESVSLVHERSAWVVSHQQPPAMELAAVVNQVGQLANELKARPQGKLP 256
           + +S + +N   + S S                   +  + NQVGQLA+EL+ RPQ  LP
Sbjct: 116 RTESYMAKNDTAIRSQS-----------------TSMRTLENQVGQLASELRNRPQVTLP 175

Query: 257 SDTKHPRREGKEQVKAVTLRSGQPLEERKEPSKPQD 292
           SDT++PRR+GKE  KAVTLRSG+ LE  +E +  Q+
Sbjct: 176 SDTENPRRDGKEHCKAVTLRSGKNLEPHEEETMDQN 193

[Close]
BLAST of Spg034319 vs. NCBI nr
Match: XP_024018055.1 (uncharacterized protein LOC112090603 [Morus notabilis])

HSP 1 Score: 69.7 bits (169), Expect = 5.2e-08
Identity = 45/116 (38.79%), Postives = 66/116 (56.90%), Query Frame = 0 

Query: 194 SSQMDSVLGRNIPLLESVSLVHERSAWVVSHQQPPAMELAAVVNQVGQLANELKARPQGK 253
           SS ++S+L   I   E+    H+ + W +              NQVGQ+AN LK RPQG 
Sbjct: 167 SSSLESLLKEFISRSEAKIQSHDAALWNLE-------------NQVGQIANSLKNRPQGS 226

Query: 254 LPSDTKHPRREGKEQVKAVTLRSGQPLEERKEP----SKPQDVGKNCDKNVVDEKE 306
           LPS+T+ PRR+GKE  KA+TLR G+ LE R +P    ++P  + +  +K  + +KE
Sbjct: 227 LPSNTEDPRRDGKEHCKAITLRCGKELESRAKPLAAHTEPTSI-QGGEKKTLPQKE 268

[Close]
BLAST of Spg034319 vs. ExPASy TrEMBL
Match: A0A6J1D1N1 (uncharacterized protein LOC111016189 OS=Momordica charantia OX=3673 GN=LOC111016189 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.1e-06
Identity = 40/74 (54.05%), Postives = 45/74 (60.81%), Query Frame = 0 

Query: 238 QVGQLANELKARPQGKLPSDTKHPRREGKEQVKAVTLRSGQPLEERKEP---SKPQDVGK 297
           QVGQ AN+LKARPQG  P  TK P+R+GKEQ KA+TLRSG   EE K P    KP    +
Sbjct: 7   QVGQHANDLKARPQGSFPRHTKVPKRDGKEQCKAITLRSGLSYEEPKMPVEVEKPSTSIQ 66

Query: 298 NCDKNVVDEKELES 309
           N    V  EK   S
Sbjct: 67  NALSEVETEKTTSS 80

[Close]
BLAST of Spg034319 vs. ExPASy TrEMBL
Match: A0A6J1H7K8 (uncharacterized protein LOC111461167 OS=Cucurbita moschata OX=3662 GN=LOC111461167 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.1e-06
Identity = 41/89 (46.07%), Postives = 55/89 (61.80%), Query Frame = 0 

Query: 203 RNIPLLESVSLVHE---RSAWVVSHQQPPAMELAAVVNQVGQLANELKARPQGKLPSDTK 262
           ++IP     SL+ E   ++  V+  QQ     L     QVGQLANEL+ RP GKLPSDT+
Sbjct: 35  QHIPETSLESLIKEYMAKNDVVIQSQQASLRNLEV---QVGQLANELRNRPLGKLPSDTE 94

Query: 263 HPRREGKEQVKAVTLRSGQPLEERKEPSK 289
            P+REG EQ +A+ LRSG+ +  R+E  K
Sbjct: 95  MPKREGMEQCQAIELRSGKEISSREEKIK 120

[Close]
BLAST of Spg034319 vs. ExPASy TrEMBL
Match: A0A5B6WDZ4 (Retrotransposon gag protein OS=Gossypium australe OX=47621 GN=EPI10_019890 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 3.1e-06
Identity = 53/160 (33.12%), Postives = 80/160 (50.00%), Query Frame = 0 

Query: 151 LVSQFNEPKFVELFSDLRSL------ESLPR-VQIDLIRPCYHSIKGEA----VSSQMDS 210
           L  Q +E    EL+     L       S+P  +Q++     Y+ +K        +S  ++
Sbjct: 45  LFQQLDEESLYELWEQFNELLRKCPHHSIPHCIQLETF---YNGLKAHTRMIIDASANEA 104

Query: 211 VLGRNIPLLESVSLVHERSAWVVSHQQPPAMELAAVVNQVGQLANELKARPQGKLPSDTK 270
            L ++ P+  S +L    + ++  +     + L  + NQVGQL NEL++RPQG LPSD K
Sbjct: 105 FLAKSPPVESSNNLEKLLNVYMAKNY----LTLRNLENQVGQLTNELRSRPQGVLPSDAK 164

Query: 271 HPRREGKEQVKAVTLRSGQPL-----EERKEPSKPQDVGK 295
           +PR  GKE  KAVTLR+ + L     E   EPS  Q+  K
Sbjct: 165 NPRNVGKEHCKAVTLRNWRTLEIKDSEAEDEPSITQNKEK 197

[Close]
BLAST of Spg034319 vs. ExPASy TrEMBL
Match: A0A6J1DPM2 (uncharacterized protein LOC111022366 OS=Momordica charantia OX=3673 GN=LOC111022366 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 5.3e-06
Identity = 41/77 (53.25%), Postives = 47/77 (61.04%), Query Frame = 0 

Query: 238 QVGQLANELKARPQGKLPSDTKHPRREGKEQVKAVTLRSGQPLEERK---EPSKPQDVGK 297
           QVGQLAN+LKARPQG +P  T+ P+R GKEQ KAVTLRSG   E  K   E  KP    +
Sbjct: 7   QVGQLANDLKARPQGSIPGHTEVPKRYGKEQCKAVTLRSGLSYEGPKMLVEVKKPSTSIQ 66

Query: 298 NCDKNVVDEKELESGQG 312
           N       EK   SG+G
Sbjct: 67  NAPSEAKKEK-TTSGEG 82

[Close]
BLAST of Spg034319 vs. ExPASy TrEMBL
Match: A0A6J1DTH7 (uncharacterized protein LOC111022971 OS=Momordica charantia OX=3673 GN=LOC111022971 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 9.0e-06
Identity = 39/77 (50.65%), Postives = 47/77 (61.04%), Query Frame = 0 

Query: 238 QVGQLANELKARPQGKLPSDTKHPRREGKEQVKAVTLRSGQPLEERKEP---SKPQDVGK 297
           Q+GQL+N+LKARPQG  P  T+ P+R+GKEQ KAVTLRSG   E  K P    KP    +
Sbjct: 7   QIGQLSNDLKARPQGSFPWHTEVPKRDGKEQCKAVTLRSGLSYERPKMPVEVEKPSTSIQ 66

Query: 298 NCDKNVVDEKELESGQG 312
           N       EK   SG+G
Sbjct: 67  NSPSEAEKEK-TTSGEG 82

The following BLAST results are available for this feature:
BLAST of Spg034319 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_030497589.14.7e-0951.90uncharacterized protein LOC115713246 [Cannabis sativa][more]
XP_030508913.16.2e-0958.82uncharacterized protein LOC115723563 [Cannabis sativa][more]
XP_030483210.11.4e-0857.58uncharacterized protein LOC115699807 [Cannabis sativa][more]
XP_030502450.12.4e-0832.05uncharacterized protein LOC115717606 [Cannabis sativa][more]
XP_024018055.15.2e-0838.79uncharacterized protein LOC112090603 [Morus notabilis][more]
BLAST of Spg034319 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg034319 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1D1N11.1e-0654.05uncharacterized protein LOC111016189 OS=Momordica charantia OX=3673 GN=LOC111016... [more]
A0A6J1H7K81.1e-0646.07uncharacterized protein LOC111461167 OS=Cucurbita moschata OX=3662 GN=LOC1114611... [more]
A0A5B6WDZ43.1e-0633.13Retrotransposon gag protein OS=Gossypium australe OX=47621 GN=EPI10_019890 PE=4 ... [more]
A0A6J1DPM25.3e-0653.25uncharacterized protein LOC111022366 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
A0A6J1DTH79.0e-0650.65uncharacterized protein LOC111022971 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
BLAST of Spg034319 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 246..314
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 252..270
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 277..305

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg034319.1Spg034319.1mRNA