Spg033846 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg033846
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibonuclease H
Locationscaffold13: 34008534 .. 34010671 (+)
RNA-Seq ExpressionSpg033846
SyntenySpg033846
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACGAGATGGGGCAGAACTTGACGAAGATCCTTAGTCTATTGAGAAGGCCCGAGTCGGTAAGACGCGAGGAGGAACATGTGCGAAGAGACCCCAAGAAGGGTAGAGGAATAGCGGACGAAGAAGTAGGGGATTTGGAAAGTGTAACAAGCCAAGTGCACCGTCCAGAGGATGGTAAAACCCGAAAGGAGGCTGGACCTAGTTGCAAAAGGATTCGCAGGAATTCTCCACAGAAACCAGGGCCAGGTATGCATGCGGAATATAATGATAGGAGAAAGTCGGAGGCTCGGACAGGGCCCAGGGCCGAGCAGGACCAGAGGGGGAGAGAGCGGGAGCTGTCCAAGTGGCTGAAAGAGGAGGATCACCATCGAGACTCCCAAAGAAGAACAGAGAACGAAGACATAGAAGGGTTCATCGGGCAGATGGAGCCACCCTTCACTGACGAGATAATGGGGGGGGGGAGGTGCCACATAAATTTAAAGTGCCAAACTTCCCACAATATGATGGAAAGAAGGACCCGAAGCAGCATCTAGACGCATATTTGACGTGGATGGACTTCCATGGGGCGAATGAAGCAACAAGATGTCGGGCGTTCGCACTGACGCTTAGTGGTTTGGCAAGACAATGGTTCAGCAAAATACCAGGGAAATCAATCGGTTCGTTCAAAGAATTGGTGCGAGCATTCGTTATGCAATTTCTAGGAGCCCGGAGCAGGCAGAAGCCCCAGATCAACCTACTGACAGTAAAATAGGGGTCGCGGGAAAGTTTGAAGGATTACATTAACCGATTTAGCAATGAAGTTTTGCAGGTGGAAGGTTATGACGACGGACTCGCTTTGACTGCAGTGATTTCGGGTTTGCAGGATGAAAGGTTGCTCAACTCGATTGGCGAAAGCCAGCCGCGGACATATGTGGAGTTCATGACCCGAGCACAGAGGTACATCAGTGCCGAGGAGTTGCTTAAGTCCAAGCAGGAAGAAAGAGAGAGCCGAGGAGTTTCTTTATCCGACTATCATCGAGAGGATCGGGCAAAGAGGTGCCGAGCCGAGGATAGAAGCCGAGGCCGACATGAACAGTTCTCGCCCAATGGCCGAGGCCTAGCAGAAGCCAAGGAGCTGCGGGGCCTTGCGGAGCCGAAAGCCAAGTTTGACAAGTATACCCCGCTAACGGCTTCACTTGAACAGGTTTTGGCCGCAATACAGGATACGAATCTGCTAAAACGCCCAGAAAGGCTGAGGTCGGACCCAGACAGGAGAAACAGGAACAAGTATTGCATGTTCCATGGAGACCGCGGTCACACAACTCGGGAGTGCATACAGTTAAGGGATGAAATAGAAACCCTAATCCGAGAGGGTTACCTCAAGGAGTTCGTGAGACATGATAGGGGGAAGAGGCCAGTGCAGAAAGAGCCAGGCAAGGGAGGCAACAACCCACCGCTGGAGATACGAACTATCCTTGGGGGACCCACCAGGGGAGAGTCGAGCAAGAAGCGAAAAGCCGCAATTCGAGAGGCACATATGGAGCCTGGAGAGCAAGGTATGTACTCGCTCTTACTTGATAGAAACTCACCAAACTTAGAGTTTTCAGATAAAGAGGCAGCAGGCATACACCACCCACACAATGATGCGCTGGTGGTGACCCTGACAGTGGCCAACGTCAAGGTACATAGAATATTGATTGATGGGGGGAGCTCAGCTGATGTTCTCTCAACCACCGCATTCGATGCCATAAAGCTGGGAAGCGACCGCCTAAGGCCGAGCCTCACACCGTTGGTGGGCTTTGGGGGGGAAAAAGTAAGCCCAAGGGGAAGCATCGAGCTGCCGGTGACGTTTGGTGAAGGGCCGCAGACAGTTACTAGAATGGTAAGCTTCCTAGTAGTAGACTGTGTCCCAGCATACAACGCAATCCTGGGACGGCCAACCCTACATGGGCTCAAAGCAGTAGCCTCAACCTACCATCAAGTCCTGAAGTTCCCAACGGAAGAAGGCGTAGGAGAGGTACGTGGGGAGCAGAGGACATCAAGAGAGTGCTATTTCATGGCGCTCAAGAATATGGACAAAAAGGCCCAAGCAGCGCCCACCTCGGGAAATGGCCGAGGCCAAGCGTCCGAGGGGTTGGATCACCCAATGAAGCACTAA

mRNA sequence

ATGAACGAGATGGGGCAGAACTTGACGAAGATCCTTAGTCTATTGAGAAGGCCCGAGTCGGTAAGACGCGAGGAGGAACATGTGCGAAGAGACCCCAAGAAGGGTAGAGGAATAGCGGACGAAGAAGTAGGGGATTTGGAAAGTGTAACAAGCCAAGTGCACCGTCCAGAGGATGGTAAAACCCGAAAGGAGGCTGGACCTAGTTGCAAAAGGATTCGCAGGAATTCTCCACAGAAACCAGGGCCAGGTATGCATGCGGAATATAATGATAGGAGAAAGTCGGAGGCTCGGACAGGGCCCAGGGCCGAGCAGGACCAGAGGGGGAGAGAGCGGGAGCTGTCCAAGTGGCTGAAAGAGGAGGATCACCATCGAGACTCCCAAAGAAGAACAGAGAACGAAGACATAGAAGGGTTCATCGGGCAGATGGAGCCACCCTTCACTGACGAGATAATGGGGGGGGGGAGCAAAATACCAGGGAAATCAATCGGTTCGTTCAAAGAATTGGTGCGAGCATTCGTGGAAGGTTATGACGACGGACTCGCTTTGACTGCAGTGATTTCGGGTTTGCAGGATGAAAGGTTGCTCAACTCGATTGGCGAAAGCCAGCCGCGGACATATGTGGAGTTCATGACCCGAGCACAGAGGTACATCAGTGCCGAGGAGTTGCTTAAGTCCAAGCAGGAAGAAAGAGAGAGCCGAGGAGTTTCTTTATCCGACTATCATCGAGAGGATCGGGCAAAGAGGTGCCGAGCCGAGGATAGAAGCCGAGGCCGACATGAACAGTTCTCGCCCAATGGCCGAGGCCTAGCAGAAGCCAAGGAGCTGCGGGGCCTTGCGGAGCCGAAAGCCAAGTTTGACAAGTATACCCCGCTAACGGCTTCACTTGAACAGGTTTTGGCCGCAATACAGGATACGAATCTGCTAAAACGCCCAGAAAGGCTGAGGTCGGACCCAGACAGGAGAAACAGGAACAAGTATTGCATGTTCCATGGAGACCGCGGTCACACAACTCGGGAGTGCATACAGTTAAGGGATGAAATAGAAACCCTAATCCGAGAGGGTTACCTCAAGGAGTTCGTGAGACATGATAGGGGGAAGAGGCCAGTGCAGAAAGAGCCAGGCAAGGGAGGCAACAACCCACCGCTGGAGATACGAACTATCCTTGGGGGACCCACCAGGGGAGAGTCGAGCAAGAAGCGAAAAGCCGCAATTCGAGAGGCACATATGGAGCCTGGAGAGCAAGTAAGCCCAAGGGGAAGCATCGAGCTGCCGGTGACGTTTGGTGAAGGGCCGCAGACAGTTACTAGAATGGTAAGCTTCCTAGTAGTAGACTGTGTCCCAGCATACAACGCAATCCTGGGACGGCCAACCCTACATGGGCTCAAAGCAGTAGCCTCAACCTACCATCAAGTCCTGAAGTTCCCAACGGAAGAAGGCGTAGGAGAGGTACGTGGGGAGCAGAGGACATCAAGAGAGTGCTATTTCATGGCGCTCAAGAATATGGACAAAAAGGCCCAAGCAGCGCCCACCTCGGGAAATGGCCGAGGCCAAGCGTCCGAGGGGTTGGATCACCCAATGAAGCACTAA

Coding sequence (CDS)

ATGAACGAGATGGGGCAGAACTTGACGAAGATCCTTAGTCTATTGAGAAGGCCCGAGTCGGTAAGACGCGAGGAGGAACATGTGCGAAGAGACCCCAAGAAGGGTAGAGGAATAGCGGACGAAGAAGTAGGGGATTTGGAAAGTGTAACAAGCCAAGTGCACCGTCCAGAGGATGGTAAAACCCGAAAGGAGGCTGGACCTAGTTGCAAAAGGATTCGCAGGAATTCTCCACAGAAACCAGGGCCAGGTATGCATGCGGAATATAATGATAGGAGAAAGTCGGAGGCTCGGACAGGGCCCAGGGCCGAGCAGGACCAGAGGGGGAGAGAGCGGGAGCTGTCCAAGTGGCTGAAAGAGGAGGATCACCATCGAGACTCCCAAAGAAGAACAGAGAACGAAGACATAGAAGGGTTCATCGGGCAGATGGAGCCACCCTTCACTGACGAGATAATGGGGGGGGGGAGCAAAATACCAGGGAAATCAATCGGTTCGTTCAAAGAATTGGTGCGAGCATTCGTGGAAGGTTATGACGACGGACTCGCTTTGACTGCAGTGATTTCGGGTTTGCAGGATGAAAGGTTGCTCAACTCGATTGGCGAAAGCCAGCCGCGGACATATGTGGAGTTCATGACCCGAGCACAGAGGTACATCAGTGCCGAGGAGTTGCTTAAGTCCAAGCAGGAAGAAAGAGAGAGCCGAGGAGTTTCTTTATCCGACTATCATCGAGAGGATCGGGCAAAGAGGTGCCGAGCCGAGGATAGAAGCCGAGGCCGACATGAACAGTTCTCGCCCAATGGCCGAGGCCTAGCAGAAGCCAAGGAGCTGCGGGGCCTTGCGGAGCCGAAAGCCAAGTTTGACAAGTATACCCCGCTAACGGCTTCACTTGAACAGGTTTTGGCCGCAATACAGGATACGAATCTGCTAAAACGCCCAGAAAGGCTGAGGTCGGACCCAGACAGGAGAAACAGGAACAAGTATTGCATGTTCCATGGAGACCGCGGTCACACAACTCGGGAGTGCATACAGTTAAGGGATGAAATAGAAACCCTAATCCGAGAGGGTTACCTCAAGGAGTTCGTGAGACATGATAGGGGGAAGAGGCCAGTGCAGAAAGAGCCAGGCAAGGGAGGCAACAACCCACCGCTGGAGATACGAACTATCCTTGGGGGACCCACCAGGGGAGAGTCGAGCAAGAAGCGAAAAGCCGCAATTCGAGAGGCACATATGGAGCCTGGAGAGCAAGTAAGCCCAAGGGGAAGCATCGAGCTGCCGGTGACGTTTGGTGAAGGGCCGCAGACAGTTACTAGAATGGTAAGCTTCCTAGTAGTAGACTGTGTCCCAGCATACAACGCAATCCTGGGACGGCCAACCCTACATGGGCTCAAAGCAGTAGCCTCAACCTACCATCAAGTCCTGAAGTTCCCAACGGAAGAAGGCGTAGGAGAGGTACGTGGGGAGCAGAGGACATCAAGAGAGTGCTATTTCATGGCGCTCAAGAATATGGACAAAAAGGCCCAAGCAGCGCCCACCTCGGGAAATGGCCGAGGCCAAGCGTCCGAGGGGTTGGATCACCCAATGAAGCACTAA

Protein sequence

MNEMGQNLTKILSLLRRPESVRREEEHVRRDPKKGRGIADEEVGDLESVTSQVHRPEDGKTRKEAGPSCKRIRRNSPQKPGPGMHAEYNDRRKSEARTGPRAEQDQRGRERELSKWLKEEDHHRDSQRRTENEDIEGFIGQMEPPFTDEIMGGGSKIPGKSIGSFKELVRAFVEGYDDGLALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLKSKQEERESRGVSLSDYHREDRAKRCRAEDRSRGRHEQFSPNGRGLAEAKELRGLAEPKAKFDKYTPLTASLEQVLAAIQDTNLLKRPERLRSDPDRRNRNKYCMFHGDRGHTTRECIQLRDEIETLIREGYLKEFVRHDRGKRPVQKEPGKGGNNPPLEIRTILGGPTRGESSKKRKAAIREAHMEPGEQVSPRGSIELPVTFGEGPQTVTRMVSFLVVDCVPAYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGEVRGEQRTSRECYFMALKNMDKKAQAAPTSGNGRGQASEGLDHPMKH
Homology
BLAST of Spg033846 vs. NCBI nr
Match: XP_024041095.1 (uncharacterized protein LOC112098853 [Citrus clementina])

HSP 1 Score: 209.1 bits (531), Expect = 9.0e-50
Identity = 141/428 (32.94%), Postives = 207/428 (48.36%), Query Frame = 0

Query: 173 VEGYDDGLALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLKSKQEER-- 232
           V+GYDDG+AL+ ++ GL+  +L  S+ +  P +Y E + RA++Y +AEE  K++ +E+  
Sbjct: 301 VDGYDDGIALSGIMEGLRMGKLWWSVSKRPPTSYSEMLARAEKYANAEERFKNRNQEKGE 360

Query: 233 ESRGVSLSDYHREDRAKRCRAEDRSRGRHEQFSPNGRGLAEAKELRGLAEPKAKFDKYTP 292
            ++G    D  RE R  R    D+S  R  QF P  R  +E ++ R      ++F  +T 
Sbjct: 361 STKGKKKKDDQRERRVVR---PDQSL-RRNQFRPGER--SEVRDTR--PRLASQFTNFTE 420

Query: 293 LTASLEQVLAAIQDTNLLKRPERLRSDPDRRNRNKYCMFHGDRGHTTRECIQLRDEIETL 352
           L    EQ+L  +++  L + P  ++++P RRN NKYC FH D GH T EC +L+++IE+L
Sbjct: 421 LNTPREQILMQVRNPTLFRTPPPMKTNPSRRNPNKYCHFHKDHGHDTSECFELKEQIESL 480

Query: 353 IREGYLKEFVRHD----RGKRPVQKEPGKG-----GNNPPLEIRTILGGPTRGESSKKRK 412
           +R+G L+E+VR+     + ++P   +  KG      +    ++  I GGP  G+S K RK
Sbjct: 481 VRQGQLQEYVRNPEDRVKSEQPESSKKRKGKKKEDSDESMSDVNHIWGGPAAGDSRKSRK 540

Query: 413 AAIREAHMEP-------------------------------------------------- 472
              R+A  EP                                                  
Sbjct: 541 NLARQARHEPNGPEVNLTNQSQGSMVRGIPIIFSEDDARGVHHPHCDALVVTLPVANKRL 600

Query: 473 ----------------------------------------GEQVSPRGSIELPVTFGEGP 500
                                                   G  V P G IEL V+FG+ P
Sbjct: 601 HRILIDNGSSADILFLSTFARMGLERSQLKPYTTPLHGFAGGSVVPEGVIELIVSFGKSP 660

BLAST of Spg033846 vs. NCBI nr
Match: XP_030963320.1 (uncharacterized protein LOC115984434 [Quercus lobata])

HSP 1 Score: 206.8 bits (525), Expect = 4.5e-49
Identity = 133/363 (36.64%), Postives = 197/363 (54.27%), Query Frame = 0

Query: 173 VEGYDDGLALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLKSKQEERES 232
           V+  DD L L A  +G+  +  ++ + E +P+T  E +  AQ +++AE+ + +K+ +R  
Sbjct: 254 VDEMDDKLLLAAFHNGVHSDLFIHKLYEQEPQTMAELVHSAQNFMNAEDAIIAKKRKRIE 313

Query: 233 RGVSLSDYHRED--RAKRCRAEDRSRGRHEQFSPNGRGLAEAKELRGLAEPKAKFDKYTP 292
           +  +    H E   R K+ R ED+                  K+    A P A+  +YTP
Sbjct: 314 KMDANPTRHSEQGPRLKKGRTEDK------------------KDRDRKAGPSARSQQYTP 373

Query: 293 LTASLEQVLAAIQDTNLLKRPERLRSDPDRRNRNKYCMFHGDRGHTTRECIQLRDEIETL 352
           L    +QVL  I+D   LK  E+++ DP++ NRNKYC FH D GH T EC  L+ +IE L
Sbjct: 374 LNMPFDQVLMQIKDDPSLKWLEKMKGDPNKCNRNKYCRFHRDHGHDTDECFDLKQQIENL 433

Query: 353 IREGYLKEFVRHDRGKRPVQKEPGKGGNNPPL-EIRTILGGPTRGESSKK---------- 412
           IR+G L+ F+  D  K    K   +  + PPL EIR I+GG +  +SS++          
Sbjct: 434 IRQGKLRSFLGRDH-KDEKLKGKAEESSRPPLGEIRVIVGGSSTVQSSRRVLVDNGSSAD 493

Query: 413 -------RKAAIREAHMEP---------GEQVSPRGSIELPVTFGEGPQTVTRMVSFLVV 472
                  ++  +    + P         G +V P G++ LPV  G  PQ VT+ VSFLVV
Sbjct: 494 ILYFPAFQQMKLGRDRLRPVNSPLVGFGGMKVQPVGTVTLPVVVGAYPQQVTKDVSFLVV 553

Query: 473 DCVPAYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGEVRGEQRTSRECYFMALKNMDK 507
           DC  +YNAI+GRPTL+  K V STYH  +KFPTE GVG+V+G+Q  +RECY +A+   D+
Sbjct: 554 DCSSSYNAIIGRPTLNSWKVVTSTYHLSVKFPTEYGVGQVQGDQLAARECY-LAMLATDE 596

BLAST of Spg033846 vs. NCBI nr
Match: XP_030958631.1 (uncharacterized protein LOC115980538 [Quercus lobata])

HSP 1 Score: 203.8 bits (517), Expect = 3.8e-48
Identity = 142/422 (33.65%), Postives = 201/422 (47.63%), Query Frame = 0

Query: 173 VEGYDDGLALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLKSKQEERES 232
           V+  DD L L A  +G+  +  ++ + E +P+T  E +  AQ +++AE+ + +K+ +R  
Sbjct: 218 VDEVDDKLLLAAFHNGINSDLFIHKLYEKEPQTMAELVHSAQNFMNAEDAIIAKKRKRAE 277

Query: 233 RGVSLSDYHRED--RAKRCRAEDRSRGRHEQFSPNGRGLAEAKELRGLAEPKAKFDKYTP 292
           R  +    H E   R K+ R EDR      +  P GR                    YTP
Sbjct: 278 RMEAHPARHSEQAPRPKKGRTEDRKERDGRKTGPLGRS-----------------QNYTP 337

Query: 293 LTASLEQVLAAIQDTNLLKRPERLRSDPDRRNRNKYCMFHGDRGHTTRECIQLRDEIETL 352
           L A L QVL  I+D   LK PE+++ DP++RN+NKYC FH D GH T EC  L+ +IE L
Sbjct: 338 LNAPLNQVLMQIKDDPSLKWPEKMKGDPNKRNKNKYCRFHRDHGHDTDECYDLKQQIENL 397

Query: 353 IREGYLKEFVRHDRGKRPVQKEPGKGGNNPPL-EIRTILGGPTRGESSKKRKA---AIRE 412
           IR+G LK FV  DR     QK   +  + PPL EIR I+GG   G+SSK +K    A++ 
Sbjct: 398 IRQGKLKHFVGRDRTDEK-QKGKMEESSRPPLGEIRIIVGGNPMGQSSKSKKTYLKAVQN 457

Query: 413 AHM-----------EP-------------------------------------------- 472
             +           EP                                            
Sbjct: 458 VQLSGRTPRTRPMDEPTISFTNEDAERIHHPHDDAIVITLLIADYTTRRVLVDNGSSADV 517

Query: 473 ---------------------------GEQVSPRGSIELPVTFGEGPQTVTRMVSFLVVD 507
                                      G +V P G+I LPV  G  PQ +T+ V+FLVVD
Sbjct: 518 LYYPAFQQMRLGRDQLRAVCSPLIGFGGMKVQPVGTITLPVVVGSYPQQITKEVNFLVVD 577

BLAST of Spg033846 vs. NCBI nr
Match: XP_030958629.1 (uncharacterized protein LOC115980536 [Quercus lobata])

HSP 1 Score: 203.8 bits (517), Expect = 3.8e-48
Identity = 142/422 (33.65%), Postives = 201/422 (47.63%), Query Frame = 0

Query: 173 VEGYDDGLALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLKSKQEERES 232
           V+  DD L L A  +G+  +  ++ + E +P+T  E +  AQ +++AE+ + +K+ +R  
Sbjct: 261 VDEVDDKLLLAAFHNGINSDLFIHKLYEKEPQTMAELVHSAQNFMNAEDAIIAKKRKRAE 320

Query: 233 RGVSLSDYHRED--RAKRCRAEDRSRGRHEQFSPNGRGLAEAKELRGLAEPKAKFDKYTP 292
           R  +    H E   R K+ R EDR      +  P GR                    YTP
Sbjct: 321 RMEAHPARHSEQAPRPKKGRTEDRKERDGRKTGPLGRS-----------------QNYTP 380

Query: 293 LTASLEQVLAAIQDTNLLKRPERLRSDPDRRNRNKYCMFHGDRGHTTRECIQLRDEIETL 352
           L A L QVL  I+D   LK PE+++ DP++RN+NKYC FH D GH T EC  L+ +IE L
Sbjct: 381 LNAPLNQVLMQIKDDPSLKWPEKMKGDPNKRNKNKYCRFHRDHGHDTDECYDLKQQIENL 440

Query: 353 IREGYLKEFVRHDRGKRPVQKEPGKGGNNPPL-EIRTILGGPTRGESSKKRKA---AIRE 412
           IR+G LK FV  DR     QK   +  + PPL EIR I+GG   G+SSK +K    A++ 
Sbjct: 441 IRQGKLKHFVGRDRTDEK-QKGKMEESSRPPLGEIRIIVGGNPMGQSSKSKKTYLKAVQN 500

Query: 413 AHM-----------EP-------------------------------------------- 472
             +           EP                                            
Sbjct: 501 VQLSGRTPRTRPMDEPTISFTNEDAERIHHPHDDAIVITLLIADYTTRRVLVDNGSSADV 560

Query: 473 ---------------------------GEQVSPRGSIELPVTFGEGPQTVTRMVSFLVVD 507
                                      G +V P G+I LPV  G  PQ +T+ V+FLVVD
Sbjct: 561 LYYPAFQQMRLGRDQLRAVCSPLIGFGGMKVQPVGTITLPVVVGSYPQQITKEVNFLVVD 620

BLAST of Spg033846 vs. NCBI nr
Match: XP_023876176.1 (uncharacterized protein LOC111988620 [Quercus suber])

HSP 1 Score: 201.4 bits (511), Expect = 1.9e-47
Identity = 140/420 (33.33%), Postives = 204/420 (48.57%), Query Frame = 0

Query: 173 VEGYDDGLALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLKSKQEERES 232
           ++  DD + + A  +GL+  + L S+ ++ P+T  E + RA +Y++AE+ L+++ ++   
Sbjct: 257 IDEADDKILVAAFTNGLRKGKFLFSLYKNDPKTMAEVLYRATKYMNAEDALQARDDKPRK 316

Query: 233 RGVSLSDYHREDRAKRCRAEDRSRGRHEQFSPNGRGLAEAKELRGLAEPKAKFDKYTPLT 292
           R     +  R+  +KR R +DR   R  +                   P  +F  +TPLT
Sbjct: 317 R-ERQEERQRDQGSKRPRVDDRRNERRSK------------------PPGGRFTSFTPLT 376

Query: 293 ASLEQVLAAIQDTNLLKRPERLRSDPDRRNRNKYCMFHGDRGHTTRECIQLRDEIETLIR 352
           A ++QVL  I+D   L  P +L+SDP +R+R+KYC FH D GH T EC  L+ +IE LIR
Sbjct: 377 APIDQVLMQIKDEGALTFPGKLKSDPSKRSRDKYCRFHRDHGHDTAECYDLKQQIEALIR 436

Query: 353 EGYLKEFVRHDRGKRPVQKEPGKGGN---NPPL-EIRTILGG-PTRGESSKKRKAAIR-- 412
           +G L++FVR +R  +P Q+   +  N    PP+ +IR I+GG  T G S K RK  +R  
Sbjct: 437 QGKLQKFVRKERMDQPPQEHQPRRDNERPRPPIGDIRMIVGGTSTTGSSKKARKTYLRMI 496

Query: 413 ------------------------------------------------------------ 472
                                                                       
Sbjct: 497 QNVQLAGSVPKIARRDSPIVGFSEEDARRLHHPHDDALVVTLQVGEYNLHRVLVDNGSSA 556

Query: 473 --------------EAHMEP---------GEQVSPRGSIELPVTFGEGPQTVTRMVSFLV 503
                         +  + P         G +V P G+I L VT G+ PQ +TR V+FLV
Sbjct: 557 DILYYPAFQQMMIDKERLTPMSAPLVGFGGTRVFPLGAITLTVTVGDYPQQITRDVTFLV 616

BLAST of Spg033846 vs. ExPASy TrEMBL
Match: A0A2N9F5L1 (RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10315 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 4.7e-52
Identity = 147/434 (33.87%), Postives = 220/434 (50.69%), Query Frame = 0

Query: 129 RTENEDIEGFIGQMEPPFTDEIMGGGSK-IPGKSIGSFKEL----VRAFVEGYD------ 188
           + E+E I  FI Q+   F D  +G   +  P   + S K++    +R FV  ++      
Sbjct: 208 KLESESIGSFI-QLSRAFIDHFIGSQRRGRPPTHLLSVKQMEGESLRTFVHRFNEEAMKI 267

Query: 189 ----DGLALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLKSKQEERESR 248
               + + +TA ++GL+    L  + +  P T  E M  A ++++AE+ L++  +    R
Sbjct: 268 DRPKEDVTVTAFMAGLRKGDFLYELCKDPPETMSELMYEATKHMNAEDALEAMDDPPPKR 327

Query: 249 GVSLSDYHREDRAKRCRAEDRSRGRHEQFSPNGRGLAEAKELRGLAEPKAKFDKYTPLTA 308
                         R   EDR     +Q  P      E  E +    P  KF  +TPL  
Sbjct: 328 --------------RKETEDRKPEPAKQKVPK---FTETPERKRTTAPPVKFSSFTPLNT 387

Query: 309 SLEQVLAAIQDTNLLKRPERLRSDPDRRNRNKYCMFHGDRGHTTRECIQLRDEIETLIRE 368
            ++++L  IQD   L+ P ++RSDP+ R +N YC FH D GH T++C+ L +++ETLIR+
Sbjct: 388 PIDKLLLQIQDDPSLRWPGKIRSDPNNRPKNLYCRFHRDHGHLTKDCVALTEQVETLIRQ 447

Query: 369 GYLKEFVRHDRGKRPV-------QKEPGKGGNNPPLEIRTILGGPTRGESSK-KRKAAIR 428
           G L+++V      RP        Q EP +    P  EIRTI+GGP  G +S+  R+A  R
Sbjct: 448 GKLQKYVSRPANARPAKPPAEREQAEPNR--PEPVGEIRTIIGGPASGGTSRASRRAYAR 507

Query: 429 EAH-----------------------------MEP------------GEQVSPRGSIELP 488
           +AH                              +P            G++V P G + LP
Sbjct: 508 QAHNIMVVQRPPKNVRLDDQIISFSEEDARGTHQPHDDALVITVNIAGDKVCPVGIVTLP 567

Query: 489 VTFGEGPQTVTRMVSFLVVDCVPAYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGEVR 499
           +T G  P+TV++ V FLVV+C  AYNAI+GRPTL+ L+AV STYH +LKFPTE G+GEVR
Sbjct: 568 ITVGTHPKTVSKTVDFLVVNCPSAYNAIIGRPTLNRLQAVTSTYHLLLKFPTEHGIGEVR 621

BLAST of Spg033846 vs. ExPASy TrEMBL
Match: A0A2N9GNB7 (Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS28616 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 3.0e-51
Identity = 148/451 (32.82%), Postives = 221/451 (49.00%), Query Frame = 0

Query: 129 RTENEDIEGFIGQMEPPFTDEIMGGGSK-IPGKSIGSFKEL----VRAFVEGYD------ 188
           + E+E I  F+ Q+   F D  +G   +  P   + S K++    +R FV  ++      
Sbjct: 264 KLESESIGSFV-QLSRAFIDHFIGSQRRGRPPTHLLSVKQMEGESLRTFVHRFNEEAMKI 323

Query: 189 ----DGLALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLKSKQEERESR 248
               + + +TA ++GL+    L  + +  P T  E M  A ++++AE+ L++  +    R
Sbjct: 324 DRPKEDVTVTAFMAGLRKGDFLYELCKDPPETMSELMYEATKHMNAEDALEAMDDPPPKR 383

Query: 249 GVSLSDYHREDRAKRCRAEDRSRGRHEQFSPNGRGLAEAKELRGLAEPKAKFDKYTPLTA 308
                         R  AEDR     +Q  P     +E  E +    P  KF  +TPL  
Sbjct: 384 --------------RKEAEDRKPEPAKQKVPK---FSETPERKRTTAPPVKFSSFTPLNT 443

Query: 309 SLEQVLAAIQDTNLLKRPERLRSDPDRRNRNKYCMFHGDRGHTTRECIQLRDEIETLIRE 368
            ++++L  IQD   L+ P ++RSDP+ R +N YC FH D GH T +C+ L++++ETLIR+
Sbjct: 444 PIDKLLLQIQDDPSLRWPGKIRSDPNNRPKNLYCRFHRDHGHLTEDCVALKEQVETLIRQ 503

Query: 369 GYLKEFVRHDRGKRPV-------QKEPGKGGNNPPLEIRTILGGPTRGESSK-KRKAAIR 428
           G L+++V      RP        Q EP + G  P  EIRTI+GGP  G +S+  RKA  R
Sbjct: 504 GKLQKYVSRPANARPTKPPAQREQAEPNRPG--PVGEIRTIIGGPASGGTSRASRKAYAR 563

Query: 429 EAH-------------------------------------------------MEP----- 488
           + H                                                 + P     
Sbjct: 564 QVHNVMVVQRPPKNIRLDDQGFTTRRVMIDNGSSADILYLPAYQQMRIDKDKLRPMDAPL 623

Query: 489 ----GEQVSPRGSIELPVTFGEGPQTVTRMVSFLVVDCVPAYNAILGRPTLHGLKAVAST 499
               G++V P G + LP+T G  P+TV++ V FLVV+C  AYNAI+GRPTL+ L+AV ST
Sbjct: 624 VGFTGDKVCPVGIVTLPITVGTHPKTVSKTVDFLVVNCPSAYNAIIGRPTLNRLRAVTST 683

BLAST of Spg033846 vs. ExPASy TrEMBL
Match: A0A2N9H7V3 (Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS35602 PE=3 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 1.5e-50
Identity = 148/450 (32.89%), Postives = 221/450 (49.11%), Query Frame = 0

Query: 129 RTENEDIEGFIGQMEPPFTDEIMGGGSK-IPGKSIGSFKEL----VRAFVEGYD------ 188
           + E+E I  F+ Q+   F D  +G   +  P   + S K++    +R FV  ++      
Sbjct: 235 KLESESIGSFV-QLSRAFIDHFIGSQRRGRPPTHLLSVKQMEGESLRTFVHRFNEEAMKI 294

Query: 189 ----DGLALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLKSKQEERESR 248
               + + +TA ++GL+    L  + +  P T  E M  A ++++AE+ L++ ++    R
Sbjct: 295 DRPKEDVTVTAFMAGLRKGDFLYELCKDPPETMSELMYEATKHMNAEDALEAMEDPPPKR 354

Query: 249 GVSLSDYHREDRAKRCRAEDRSRGRHEQFSPNGRGLAEAKELRGLAEPKAKFDKYTPLTA 308
                         R  AEDR     +Q  P      E  E +    P  KF  +TPL  
Sbjct: 355 --------------RKEAEDRKPEPAKQKVPK---FTETPERKRTTAPPVKFSSFTPLNT 414

Query: 309 SLEQVLAAIQDTNLLKRPERLRSDPDRRNRNKYCMFHGDRGHTTRECIQLRDEIETLIRE 368
            ++++L  IQD   L+ P ++RSDP+ R +N YC FH D GH T EC+ L+++IETLIR+
Sbjct: 415 PIDKLLLQIQDDPSLRWPGKIRSDPNSRPKNLYCRFHRDHGHLTEECVALKEQIETLIRQ 474

Query: 369 GYLKEFVRHDRGKR----PVQKEPGKGGNNPPL-EIRTILGGPTRGESSK-KRKAAIREA 428
           G L+++V      R    P Q+E  +     P+ EIRTI+GGP  G +S+  RKA  R+ 
Sbjct: 475 GKLQKYVSRPTNTRPSKPPAQREQAEHNRPGPVGEIRTIVGGPASGGTSRASRKAYARQV 534

Query: 429 H----------------------------------------------MEP---------- 488
           H                                              + P          
Sbjct: 535 HNIMVVQRPPKNIRLDDQIISFSEEDARGTHQPHDDALVITINIAGQIAPWMPLVDAPLV 594

Query: 489 ---GEQVSPRGSIELPVTFGEGPQTVTRMVSFLVVDCVPAYNAILGRPTLHGLKAVASTY 499
              G++V P G + LP+T G  P+TV++ V FLVV+C  AYNAI+GRPTL+ L+AV STY
Sbjct: 595 GFTGDKVCPVGIVTLPITVGTHPKTVSKTVDFLVVNCPSAYNAIIGRPTLNRLRAVTSTY 654

BLAST of Spg033846 vs. ExPASy TrEMBL
Match: A0A2N9FPE3 (Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16925 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 2.8e-49
Identity = 144/444 (32.43%), Postives = 217/444 (48.87%), Query Frame = 0

Query: 129 RTENEDIEGFIGQMEPPFTDEIMGGGSK-IPGKSIGSFKEL----VRAFVEGYD------ 188
           + E+E I  F+ Q+   F D  +G   +  P   + S K++    +RAFV  ++      
Sbjct: 264 KLESESIGSFV-QLSRAFIDHFIGSQRRGRPPTHLLSVKQMEGESLRAFVHRFNEEAMKI 323

Query: 189 ----DGLALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLKSKQEERESR 248
               + + +TA ++GL+       + +    T  E M  A ++++AE+ L++  +    R
Sbjct: 324 DRPKEDVTVTAFMAGLRKGDFFYELCKDPLETMSELMYEATKHMNAEDALEAMDDPPPKR 383

Query: 249 GVSLSDYHREDRAKRCRAEDRSRGRHEQFSPNGRGLAEAKELRGLAEPKAKFDKYTPLTA 308
                         R   EDR     +Q  P     +E  E +    P  KF+ +TPL  
Sbjct: 384 --------------RKETEDRKAEPAKQKVPK---FSETPERKRTTAPPVKFNSFTPLNT 443

Query: 309 SLEQVLAAIQDTNLLKRPERLRSDPDRRNRNKYCMFHGDRGHTTRECIQLRDEIETLIRE 368
            ++++L  IQD   L+ P ++RSDP+ R +N YC FH D GH T EC+ L++++ETLIR+
Sbjct: 444 PIDKLLLQIQDDPSLRWPGKIRSDPNSRPKNLYCRFHRDHGHLTEECVALKEQVETLIRQ 503

Query: 369 GYLKEFVRHDRGKR----PVQKEPGKGGNNPPL-EIRTILGGPTRGESSK-KRKAAIREA 428
           G LK++V      R    P Q+E  +     P+ EIRTI+GGP  G +S+  RKA  R+ 
Sbjct: 504 GKLKKYVNRPANTRPAKPPAQREQVEHNRPGPVGEIRTIIGGPASGGTSRASRKAYARQV 563

Query: 429 HM-----------------------------------------------------EPGEQ 488
           H                                                         ++
Sbjct: 564 HNIMVVQRPPKNVRLDDQIISFSEEDARGTHQPHDDALIITVNIAGFTTRRVMVDNGSDK 623

Query: 489 VSPRGSIELPVTFGEGPQTVTRMVSFLVVDCVPAYNAILGRPTLHGLKAVASTYHQVLKF 499
           V P G + LP+T G  P+TV++ V FLVV+C  AYNAI+GRPTL+ L+AV STYH +LKF
Sbjct: 624 VCPVGIVTLPITVGTHPKTVSKTVDFLVVNCPSAYNAIIGRPTLNRLRAVTSTYHLLLKF 683

BLAST of Spg033846 vs. ExPASy TrEMBL
Match: A0A2N9FYD5 (Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS19666 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 1.4e-48
Identity = 149/492 (30.28%), Postives = 225/492 (45.73%), Query Frame = 0

Query: 129 RTENEDIEGFIGQMEPPFTDEIMGGGSK-IPGKSIGSFKEL----VRAFVEGYD------ 188
           + E+E I  F+ Q+   F D  +G   +  P   + S K++    +R FV  ++      
Sbjct: 264 KLESESIGSFV-QLSRAFIDHFIGSQRRGRPPTHLLSVKQMEGESLRTFVHRFNGEAMKI 323

Query: 189 ----DGLALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLKSKQEERESR 248
               + + +TA ++GL+    L  + +  P T  E M  A ++++AE+ L++  +    R
Sbjct: 324 DRPKEDVTVTAFMAGLRKGDFLYELCKDPPETMSELMYEATKHMNAEDALEAMDDPPPKR 383

Query: 249 GVSLSDYHREDRAKRCRAEDRSRGRHEQFSPNGRGLAEAKELRGLAEPKAKFDKYTPLTA 308
                         R   EDR     +Q  P      E  E +    P  KF  +TPL  
Sbjct: 384 --------------RKEVEDRKPEPSKQKVPK---FTETPERKRTTAPPVKFSSFTPLNT 443

Query: 309 SLEQVLAAIQDTNLLKRPERLRSDPDRRNRNKYCMFHGDRGHTTRECIQLRDEIETLIRE 368
            ++++L  IQD   L+ P ++RSDP+ R +N YC FH D GH T EC+ L++++ETLIR+
Sbjct: 444 PIDKLLLQIQDDPSLRWPGKIRSDPNSRPKNLYCRFHRDHGHLTEECVALKEQVETLIRQ 503

Query: 369 GYLKEFVRHDRGKRPV-------QKEPGKGGNNPPLEIRTILGGPTRGESSK-KRKAAIR 428
           G L+++V      RP        Q EP + G  P  EIRTI+GGP  G +S+  RKA  R
Sbjct: 504 GKLQKYVNRPTNTRPAKPPVQREQAEPNRPG--PVGEIRTIVGGPASGGTSRASRKAYAR 563

Query: 429 EAH--------------------------------------------------------- 488
           + H                                                         
Sbjct: 564 QVHNIMVVQRPPKNIRLDDQIISFSEEDARGTHQPHDDALVITINIAGFTTRRVMVDNGS 623

Query: 489 -------------------MEP---------GEQVSPRGSIELPVTFGEGPQTVTRMVSF 513
                              + P         G+++ P G + LP+  G  P+TV++ V F
Sbjct: 624 SADILYLPAYQQMQLDKDKLRPMDAPLVGFTGDKICPVGIVTLPIMVGTHPKTVSKTVDF 683

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_024041095.19.0e-5032.94uncharacterized protein LOC112098853 [Citrus clementina][more]
XP_030963320.14.5e-4936.64uncharacterized protein LOC115984434 [Quercus lobata][more]
XP_030958631.13.8e-4833.65uncharacterized protein LOC115980538 [Quercus lobata][more]
XP_030958629.13.8e-4833.65uncharacterized protein LOC115980536 [Quercus lobata][more]
XP_023876176.11.9e-4733.33uncharacterized protein LOC111988620 [Quercus suber][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2N9F5L14.7e-5233.87RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10315 ... [more]
A0A2N9GNB73.0e-5132.82Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS28616 PE=4 SV=1[more]
A0A2N9H7V31.5e-5032.89Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS35602 PE=3 SV=1[more]
A0A2N9FPE32.8e-4932.43Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16925 PE=4 SV=1[more]
A0A2N9FYD51.4e-4830.28Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS19666 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 85..135
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 17..135
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 227..268
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 504..528
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 17..70
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 227..261
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 363..398
NoneNo IPR availablePANTHERPTHR33240:SF7GAG-PRO-LIKE PROTEINcoord: 415..484
NoneNo IPR availablePANTHERPTHR33240OS08G0508500 PROTEINcoord: 292..381
NoneNo IPR availablePANTHERPTHR33240OS08G0508500 PROTEINcoord: 415..484
NoneNo IPR availablePANTHERPTHR33240:SF7GAG-PRO-LIKE PROTEINcoord: 292..381

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg033846.1Spg033846.1mRNA