Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACGAGATGGGGCAGAACTTGACGAAGATCCTTAGTCTATTGAGAAGGCCCGAGTCGGTAAGACGCGAGGAGGAACATGTGCGAAGAGACCCCAAGAAGGGTAGAGGAATAGCGGACGAAGAAGTAGGGGATTTGGAAAGTGTAACAAGCCAAGTGCACCGTCCAGAGGATGGTAAAACCCGAAAGGAGGCTGGACCTAGTTGCAAAAGGATTCGCAGGAATTCTCCACAGAAACCAGGGCCAGGTATGCATGCGGAATATAATGATAGGAGAAAGTCGGAGGCTCGGACAGGGCCCAGGGCCGAGCAGGACCAGAGGGGGAGAGAGCGGGAGCTGTCCAAGTGGCTGAAAGAGGAGGATCACCATCGAGACTCCCAAAGAAGAACAGAGAACGAAGACATAGAAGGGTTCATCGGGCAGATGGAGCCACCCTTCACTGACGAGATAATGGGGGGGGGGAGGTGCCACATAAATTTAAAGTGCCAAACTTCCCACAATATGATGGAAAGAAGGACCCGAAGCAGCATCTAGACGCATATTTGACGTGGATGGACTTCCATGGGGCGAATGAAGCAACAAGATGTCGGGCGTTCGCACTGACGCTTAGTGGTTTGGCAAGACAATGGTTCAGCAAAATACCAGGGAAATCAATCGGTTCGTTCAAAGAATTGGTGCGAGCATTCGTTATGCAATTTCTAGGAGCCCGGAGCAGGCAGAAGCCCCAGATCAACCTACTGACAGTAAAATAGGGGTCGCGGGAAAGTTTGAAGGATTACATTAACCGATTTAGCAATGAAGTTTTGCAGGTGGAAGGTTATGACGACGGACTCGCTTTGACTGCAGTGATTTCGGGTTTGCAGGATGAAAGGTTGCTCAACTCGATTGGCGAAAGCCAGCCGCGGACATATGTGGAGTTCATGACCCGAGCACAGAGGTACATCAGTGCCGAGGAGTTGCTTAAGTCCAAGCAGGAAGAAAGAGAGAGCCGAGGAGTTTCTTTATCCGACTATCATCGAGAGGATCGGGCAAAGAGGTGCCGAGCCGAGGATAGAAGCCGAGGCCGACATGAACAGTTCTCGCCCAATGGCCGAGGCCTAGCAGAAGCCAAGGAGCTGCGGGGCCTTGCGGAGCCGAAAGCCAAGTTTGACAAGTATACCCCGCTAACGGCTTCACTTGAACAGGTTTTGGCCGCAATACAGGATACGAATCTGCTAAAACGCCCAGAAAGGCTGAGGTCGGACCCAGACAGGAGAAACAGGAACAAGTATTGCATGTTCCATGGAGACCGCGGTCACACAACTCGGGAGTGCATACAGTTAAGGGATGAAATAGAAACCCTAATCCGAGAGGGTTACCTCAAGGAGTTCGTGAGACATGATAGGGGGAAGAGGCCAGTGCAGAAAGAGCCAGGCAAGGGAGGCAACAACCCACCGCTGGAGATACGAACTATCCTTGGGGGACCCACCAGGGGAGAGTCGAGCAAGAAGCGAAAAGCCGCAATTCGAGAGGCACATATGGAGCCTGGAGAGCAAGGTATGTACTCGCTCTTACTTGATAGAAACTCACCAAACTTAGAGTTTTCAGATAAAGAGGCAGCAGGCATACACCACCCACACAATGATGCGCTGGTGGTGACCCTGACAGTGGCCAACGTCAAGGTACATAGAATATTGATTGATGGGGGGAGCTCAGCTGATGTTCTCTCAACCACCGCATTCGATGCCATAAAGCTGGGAAGCGACCGCCTAAGGCCGAGCCTCACACCGTTGGTGGGCTTTGGGGGGGAAAAAGTAAGCCCAAGGGGAAGCATCGAGCTGCCGGTGACGTTTGGTGAAGGGCCGCAGACAGTTACTAGAATGGTAAGCTTCCTAGTAGTAGACTGTGTCCCAGCATACAACGCAATCCTGGGACGGCCAACCCTACATGGGCTCAAAGCAGTAGCCTCAACCTACCATCAAGTCCTGAAGTTCCCAACGGAAGAAGGCGTAGGAGAGGTACGTGGGGAGCAGAGGACATCAAGAGAGTGCTATTTCATGGCGCTCAAGAATATGGACAAAAAGGCCCAAGCAGCGCCCACCTCGGGAAATGGCCGAGGCCAAGCGTCCGAGGGGTTGGATCACCCAATGAAGCACTAA
mRNA sequence
ATGAACGAGATGGGGCAGAACTTGACGAAGATCCTTAGTCTATTGAGAAGGCCCGAGTCGGTAAGACGCGAGGAGGAACATGTGCGAAGAGACCCCAAGAAGGGTAGAGGAATAGCGGACGAAGAAGTAGGGGATTTGGAAAGTGTAACAAGCCAAGTGCACCGTCCAGAGGATGGTAAAACCCGAAAGGAGGCTGGACCTAGTTGCAAAAGGATTCGCAGGAATTCTCCACAGAAACCAGGGCCAGGTATGCATGCGGAATATAATGATAGGAGAAAGTCGGAGGCTCGGACAGGGCCCAGGGCCGAGCAGGACCAGAGGGGGAGAGAGCGGGAGCTGTCCAAGTGGCTGAAAGAGGAGGATCACCATCGAGACTCCCAAAGAAGAACAGAGAACGAAGACATAGAAGGGTTCATCGGGCAGATGGAGCCACCCTTCACTGACGAGATAATGGGGGGGGGGAGCAAAATACCAGGGAAATCAATCGGTTCGTTCAAAGAATTGGTGCGAGCATTCGTGGAAGGTTATGACGACGGACTCGCTTTGACTGCAGTGATTTCGGGTTTGCAGGATGAAAGGTTGCTCAACTCGATTGGCGAAAGCCAGCCGCGGACATATGTGGAGTTCATGACCCGAGCACAGAGGTACATCAGTGCCGAGGAGTTGCTTAAGTCCAAGCAGGAAGAAAGAGAGAGCCGAGGAGTTTCTTTATCCGACTATCATCGAGAGGATCGGGCAAAGAGGTGCCGAGCCGAGGATAGAAGCCGAGGCCGACATGAACAGTTCTCGCCCAATGGCCGAGGCCTAGCAGAAGCCAAGGAGCTGCGGGGCCTTGCGGAGCCGAAAGCCAAGTTTGACAAGTATACCCCGCTAACGGCTTCACTTGAACAGGTTTTGGCCGCAATACAGGATACGAATCTGCTAAAACGCCCAGAAAGGCTGAGGTCGGACCCAGACAGGAGAAACAGGAACAAGTATTGCATGTTCCATGGAGACCGCGGTCACACAACTCGGGAGTGCATACAGTTAAGGGATGAAATAGAAACCCTAATCCGAGAGGGTTACCTCAAGGAGTTCGTGAGACATGATAGGGGGAAGAGGCCAGTGCAGAAAGAGCCAGGCAAGGGAGGCAACAACCCACCGCTGGAGATACGAACTATCCTTGGGGGACCCACCAGGGGAGAGTCGAGCAAGAAGCGAAAAGCCGCAATTCGAGAGGCACATATGGAGCCTGGAGAGCAAGTAAGCCCAAGGGGAAGCATCGAGCTGCCGGTGACGTTTGGTGAAGGGCCGCAGACAGTTACTAGAATGGTAAGCTTCCTAGTAGTAGACTGTGTCCCAGCATACAACGCAATCCTGGGACGGCCAACCCTACATGGGCTCAAAGCAGTAGCCTCAACCTACCATCAAGTCCTGAAGTTCCCAACGGAAGAAGGCGTAGGAGAGGTACGTGGGGAGCAGAGGACATCAAGAGAGTGCTATTTCATGGCGCTCAAGAATATGGACAAAAAGGCCCAAGCAGCGCCCACCTCGGGAAATGGCCGAGGCCAAGCGTCCGAGGGGTTGGATCACCCAATGAAGCACTAA
Coding sequence (CDS)
ATGAACGAGATGGGGCAGAACTTGACGAAGATCCTTAGTCTATTGAGAAGGCCCGAGTCGGTAAGACGCGAGGAGGAACATGTGCGAAGAGACCCCAAGAAGGGTAGAGGAATAGCGGACGAAGAAGTAGGGGATTTGGAAAGTGTAACAAGCCAAGTGCACCGTCCAGAGGATGGTAAAACCCGAAAGGAGGCTGGACCTAGTTGCAAAAGGATTCGCAGGAATTCTCCACAGAAACCAGGGCCAGGTATGCATGCGGAATATAATGATAGGAGAAAGTCGGAGGCTCGGACAGGGCCCAGGGCCGAGCAGGACCAGAGGGGGAGAGAGCGGGAGCTGTCCAAGTGGCTGAAAGAGGAGGATCACCATCGAGACTCCCAAAGAAGAACAGAGAACGAAGACATAGAAGGGTTCATCGGGCAGATGGAGCCACCCTTCACTGACGAGATAATGGGGGGGGGGAGCAAAATACCAGGGAAATCAATCGGTTCGTTCAAAGAATTGGTGCGAGCATTCGTGGAAGGTTATGACGACGGACTCGCTTTGACTGCAGTGATTTCGGGTTTGCAGGATGAAAGGTTGCTCAACTCGATTGGCGAAAGCCAGCCGCGGACATATGTGGAGTTCATGACCCGAGCACAGAGGTACATCAGTGCCGAGGAGTTGCTTAAGTCCAAGCAGGAAGAAAGAGAGAGCCGAGGAGTTTCTTTATCCGACTATCATCGAGAGGATCGGGCAAAGAGGTGCCGAGCCGAGGATAGAAGCCGAGGCCGACATGAACAGTTCTCGCCCAATGGCCGAGGCCTAGCAGAAGCCAAGGAGCTGCGGGGCCTTGCGGAGCCGAAAGCCAAGTTTGACAAGTATACCCCGCTAACGGCTTCACTTGAACAGGTTTTGGCCGCAATACAGGATACGAATCTGCTAAAACGCCCAGAAAGGCTGAGGTCGGACCCAGACAGGAGAAACAGGAACAAGTATTGCATGTTCCATGGAGACCGCGGTCACACAACTCGGGAGTGCATACAGTTAAGGGATGAAATAGAAACCCTAATCCGAGAGGGTTACCTCAAGGAGTTCGTGAGACATGATAGGGGGAAGAGGCCAGTGCAGAAAGAGCCAGGCAAGGGAGGCAACAACCCACCGCTGGAGATACGAACTATCCTTGGGGGACCCACCAGGGGAGAGTCGAGCAAGAAGCGAAAAGCCGCAATTCGAGAGGCACATATGGAGCCTGGAGAGCAAGTAAGCCCAAGGGGAAGCATCGAGCTGCCGGTGACGTTTGGTGAAGGGCCGCAGACAGTTACTAGAATGGTAAGCTTCCTAGTAGTAGACTGTGTCCCAGCATACAACGCAATCCTGGGACGGCCAACCCTACATGGGCTCAAAGCAGTAGCCTCAACCTACCATCAAGTCCTGAAGTTCCCAACGGAAGAAGGCGTAGGAGAGGTACGTGGGGAGCAGAGGACATCAAGAGAGTGCTATTTCATGGCGCTCAAGAATATGGACAAAAAGGCCCAAGCAGCGCCCACCTCGGGAAATGGCCGAGGCCAAGCGTCCGAGGGGTTGGATCACCCAATGAAGCACTAA
Protein sequence
MNEMGQNLTKILSLLRRPESVRREEEHVRRDPKKGRGIADEEVGDLESVTSQVHRPEDGKTRKEAGPSCKRIRRNSPQKPGPGMHAEYNDRRKSEARTGPRAEQDQRGRERELSKWLKEEDHHRDSQRRTENEDIEGFIGQMEPPFTDEIMGGGSKIPGKSIGSFKELVRAFVEGYDDGLALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLKSKQEERESRGVSLSDYHREDRAKRCRAEDRSRGRHEQFSPNGRGLAEAKELRGLAEPKAKFDKYTPLTASLEQVLAAIQDTNLLKRPERLRSDPDRRNRNKYCMFHGDRGHTTRECIQLRDEIETLIREGYLKEFVRHDRGKRPVQKEPGKGGNNPPLEIRTILGGPTRGESSKKRKAAIREAHMEPGEQVSPRGSIELPVTFGEGPQTVTRMVSFLVVDCVPAYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGEVRGEQRTSRECYFMALKNMDKKAQAAPTSGNGRGQASEGLDHPMKH
Homology
BLAST of Spg033846 vs. NCBI nr
Match:
XP_024041095.1 (uncharacterized protein LOC112098853 [Citrus clementina])
HSP 1 Score: 209.1 bits (531), Expect = 9.0e-50
Identity = 141/428 (32.94%), Postives = 207/428 (48.36%), Query Frame = 0
Query: 173 VEGYDDGLALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLKSKQEER-- 232
V+GYDDG+AL+ ++ GL+ +L S+ + P +Y E + RA++Y +AEE K++ +E+
Sbjct: 301 VDGYDDGIALSGIMEGLRMGKLWWSVSKRPPTSYSEMLARAEKYANAEERFKNRNQEKGE 360
Query: 233 ESRGVSLSDYHREDRAKRCRAEDRSRGRHEQFSPNGRGLAEAKELRGLAEPKAKFDKYTP 292
++G D RE R R D+S R QF P R +E ++ R ++F +T
Sbjct: 361 STKGKKKKDDQRERRVVR---PDQSL-RRNQFRPGER--SEVRDTR--PRLASQFTNFTE 420
Query: 293 LTASLEQVLAAIQDTNLLKRPERLRSDPDRRNRNKYCMFHGDRGHTTRECIQLRDEIETL 352
L EQ+L +++ L + P ++++P RRN NKYC FH D GH T EC +L+++IE+L
Sbjct: 421 LNTPREQILMQVRNPTLFRTPPPMKTNPSRRNPNKYCHFHKDHGHDTSECFELKEQIESL 480
Query: 353 IREGYLKEFVRHD----RGKRPVQKEPGKG-----GNNPPLEIRTILGGPTRGESSKKRK 412
+R+G L+E+VR+ + ++P + KG + ++ I GGP G+S K RK
Sbjct: 481 VRQGQLQEYVRNPEDRVKSEQPESSKKRKGKKKEDSDESMSDVNHIWGGPAAGDSRKSRK 540
Query: 413 AAIREAHMEP-------------------------------------------------- 472
R+A EP
Sbjct: 541 NLARQARHEPNGPEVNLTNQSQGSMVRGIPIIFSEDDARGVHHPHCDALVVTLPVANKRL 600
Query: 473 ----------------------------------------GEQVSPRGSIELPVTFGEGP 500
G V P G IEL V+FG+ P
Sbjct: 601 HRILIDNGSSADILFLSTFARMGLERSQLKPYTTPLHGFAGGSVVPEGVIELIVSFGKSP 660
BLAST of Spg033846 vs. NCBI nr
Match:
XP_030963320.1 (uncharacterized protein LOC115984434 [Quercus lobata])
HSP 1 Score: 206.8 bits (525), Expect = 4.5e-49
Identity = 133/363 (36.64%), Postives = 197/363 (54.27%), Query Frame = 0
Query: 173 VEGYDDGLALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLKSKQEERES 232
V+ DD L L A +G+ + ++ + E +P+T E + AQ +++AE+ + +K+ +R
Sbjct: 254 VDEMDDKLLLAAFHNGVHSDLFIHKLYEQEPQTMAELVHSAQNFMNAEDAIIAKKRKRIE 313
Query: 233 RGVSLSDYHRED--RAKRCRAEDRSRGRHEQFSPNGRGLAEAKELRGLAEPKAKFDKYTP 292
+ + H E R K+ R ED+ K+ A P A+ +YTP
Sbjct: 314 KMDANPTRHSEQGPRLKKGRTEDK------------------KDRDRKAGPSARSQQYTP 373
Query: 293 LTASLEQVLAAIQDTNLLKRPERLRSDPDRRNRNKYCMFHGDRGHTTRECIQLRDEIETL 352
L +QVL I+D LK E+++ DP++ NRNKYC FH D GH T EC L+ +IE L
Sbjct: 374 LNMPFDQVLMQIKDDPSLKWLEKMKGDPNKCNRNKYCRFHRDHGHDTDECFDLKQQIENL 433
Query: 353 IREGYLKEFVRHDRGKRPVQKEPGKGGNNPPL-EIRTILGGPTRGESSKK---------- 412
IR+G L+ F+ D K K + + PPL EIR I+GG + +SS++
Sbjct: 434 IRQGKLRSFLGRDH-KDEKLKGKAEESSRPPLGEIRVIVGGSSTVQSSRRVLVDNGSSAD 493
Query: 413 -------RKAAIREAHMEP---------GEQVSPRGSIELPVTFGEGPQTVTRMVSFLVV 472
++ + + P G +V P G++ LPV G PQ VT+ VSFLVV
Sbjct: 494 ILYFPAFQQMKLGRDRLRPVNSPLVGFGGMKVQPVGTVTLPVVVGAYPQQVTKDVSFLVV 553
Query: 473 DCVPAYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGEVRGEQRTSRECYFMALKNMDK 507
DC +YNAI+GRPTL+ K V STYH +KFPTE GVG+V+G+Q +RECY +A+ D+
Sbjct: 554 DCSSSYNAIIGRPTLNSWKVVTSTYHLSVKFPTEYGVGQVQGDQLAARECY-LAMLATDE 596
BLAST of Spg033846 vs. NCBI nr
Match:
XP_030958631.1 (uncharacterized protein LOC115980538 [Quercus lobata])
HSP 1 Score: 203.8 bits (517), Expect = 3.8e-48
Identity = 142/422 (33.65%), Postives = 201/422 (47.63%), Query Frame = 0
Query: 173 VEGYDDGLALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLKSKQEERES 232
V+ DD L L A +G+ + ++ + E +P+T E + AQ +++AE+ + +K+ +R
Sbjct: 218 VDEVDDKLLLAAFHNGINSDLFIHKLYEKEPQTMAELVHSAQNFMNAEDAIIAKKRKRAE 277
Query: 233 RGVSLSDYHRED--RAKRCRAEDRSRGRHEQFSPNGRGLAEAKELRGLAEPKAKFDKYTP 292
R + H E R K+ R EDR + P GR YTP
Sbjct: 278 RMEAHPARHSEQAPRPKKGRTEDRKERDGRKTGPLGRS-----------------QNYTP 337
Query: 293 LTASLEQVLAAIQDTNLLKRPERLRSDPDRRNRNKYCMFHGDRGHTTRECIQLRDEIETL 352
L A L QVL I+D LK PE+++ DP++RN+NKYC FH D GH T EC L+ +IE L
Sbjct: 338 LNAPLNQVLMQIKDDPSLKWPEKMKGDPNKRNKNKYCRFHRDHGHDTDECYDLKQQIENL 397
Query: 353 IREGYLKEFVRHDRGKRPVQKEPGKGGNNPPL-EIRTILGGPTRGESSKKRKA---AIRE 412
IR+G LK FV DR QK + + PPL EIR I+GG G+SSK +K A++
Sbjct: 398 IRQGKLKHFVGRDRTDEK-QKGKMEESSRPPLGEIRIIVGGNPMGQSSKSKKTYLKAVQN 457
Query: 413 AHM-----------EP-------------------------------------------- 472
+ EP
Sbjct: 458 VQLSGRTPRTRPMDEPTISFTNEDAERIHHPHDDAIVITLLIADYTTRRVLVDNGSSADV 517
Query: 473 ---------------------------GEQVSPRGSIELPVTFGEGPQTVTRMVSFLVVD 507
G +V P G+I LPV G PQ +T+ V+FLVVD
Sbjct: 518 LYYPAFQQMRLGRDQLRAVCSPLIGFGGMKVQPVGTITLPVVVGSYPQQITKEVNFLVVD 577
BLAST of Spg033846 vs. NCBI nr
Match:
XP_030958629.1 (uncharacterized protein LOC115980536 [Quercus lobata])
HSP 1 Score: 203.8 bits (517), Expect = 3.8e-48
Identity = 142/422 (33.65%), Postives = 201/422 (47.63%), Query Frame = 0
Query: 173 VEGYDDGLALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLKSKQEERES 232
V+ DD L L A +G+ + ++ + E +P+T E + AQ +++AE+ + +K+ +R
Sbjct: 261 VDEVDDKLLLAAFHNGINSDLFIHKLYEKEPQTMAELVHSAQNFMNAEDAIIAKKRKRAE 320
Query: 233 RGVSLSDYHRED--RAKRCRAEDRSRGRHEQFSPNGRGLAEAKELRGLAEPKAKFDKYTP 292
R + H E R K+ R EDR + P GR YTP
Sbjct: 321 RMEAHPARHSEQAPRPKKGRTEDRKERDGRKTGPLGRS-----------------QNYTP 380
Query: 293 LTASLEQVLAAIQDTNLLKRPERLRSDPDRRNRNKYCMFHGDRGHTTRECIQLRDEIETL 352
L A L QVL I+D LK PE+++ DP++RN+NKYC FH D GH T EC L+ +IE L
Sbjct: 381 LNAPLNQVLMQIKDDPSLKWPEKMKGDPNKRNKNKYCRFHRDHGHDTDECYDLKQQIENL 440
Query: 353 IREGYLKEFVRHDRGKRPVQKEPGKGGNNPPL-EIRTILGGPTRGESSKKRKA---AIRE 412
IR+G LK FV DR QK + + PPL EIR I+GG G+SSK +K A++
Sbjct: 441 IRQGKLKHFVGRDRTDEK-QKGKMEESSRPPLGEIRIIVGGNPMGQSSKSKKTYLKAVQN 500
Query: 413 AHM-----------EP-------------------------------------------- 472
+ EP
Sbjct: 501 VQLSGRTPRTRPMDEPTISFTNEDAERIHHPHDDAIVITLLIADYTTRRVLVDNGSSADV 560
Query: 473 ---------------------------GEQVSPRGSIELPVTFGEGPQTVTRMVSFLVVD 507
G +V P G+I LPV G PQ +T+ V+FLVVD
Sbjct: 561 LYYPAFQQMRLGRDQLRAVCSPLIGFGGMKVQPVGTITLPVVVGSYPQQITKEVNFLVVD 620
BLAST of Spg033846 vs. NCBI nr
Match:
XP_023876176.1 (uncharacterized protein LOC111988620 [Quercus suber])
HSP 1 Score: 201.4 bits (511), Expect = 1.9e-47
Identity = 140/420 (33.33%), Postives = 204/420 (48.57%), Query Frame = 0
Query: 173 VEGYDDGLALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLKSKQEERES 232
++ DD + + A +GL+ + L S+ ++ P+T E + RA +Y++AE+ L+++ ++
Sbjct: 257 IDEADDKILVAAFTNGLRKGKFLFSLYKNDPKTMAEVLYRATKYMNAEDALQARDDKPRK 316
Query: 233 RGVSLSDYHREDRAKRCRAEDRSRGRHEQFSPNGRGLAEAKELRGLAEPKAKFDKYTPLT 292
R + R+ +KR R +DR R + P +F +TPLT
Sbjct: 317 R-ERQEERQRDQGSKRPRVDDRRNERRSK------------------PPGGRFTSFTPLT 376
Query: 293 ASLEQVLAAIQDTNLLKRPERLRSDPDRRNRNKYCMFHGDRGHTTRECIQLRDEIETLIR 352
A ++QVL I+D L P +L+SDP +R+R+KYC FH D GH T EC L+ +IE LIR
Sbjct: 377 APIDQVLMQIKDEGALTFPGKLKSDPSKRSRDKYCRFHRDHGHDTAECYDLKQQIEALIR 436
Query: 353 EGYLKEFVRHDRGKRPVQKEPGKGGN---NPPL-EIRTILGG-PTRGESSKKRKAAIR-- 412
+G L++FVR +R +P Q+ + N PP+ +IR I+GG T G S K RK +R
Sbjct: 437 QGKLQKFVRKERMDQPPQEHQPRRDNERPRPPIGDIRMIVGGTSTTGSSKKARKTYLRMI 496
Query: 413 ------------------------------------------------------------ 472
Sbjct: 497 QNVQLAGSVPKIARRDSPIVGFSEEDARRLHHPHDDALVVTLQVGEYNLHRVLVDNGSSA 556
Query: 473 --------------EAHMEP---------GEQVSPRGSIELPVTFGEGPQTVTRMVSFLV 503
+ + P G +V P G+I L VT G+ PQ +TR V+FLV
Sbjct: 557 DILYYPAFQQMMIDKERLTPMSAPLVGFGGTRVFPLGAITLTVTVGDYPQQITRDVTFLV 616
BLAST of Spg033846 vs. ExPASy TrEMBL
Match:
A0A2N9F5L1 (RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10315 PE=4 SV=1)
HSP 1 Score: 215.7 bits (548), Expect = 4.7e-52
Identity = 147/434 (33.87%), Postives = 220/434 (50.69%), Query Frame = 0
Query: 129 RTENEDIEGFIGQMEPPFTDEIMGGGSK-IPGKSIGSFKEL----VRAFVEGYD------ 188
+ E+E I FI Q+ F D +G + P + S K++ +R FV ++
Sbjct: 208 KLESESIGSFI-QLSRAFIDHFIGSQRRGRPPTHLLSVKQMEGESLRTFVHRFNEEAMKI 267
Query: 189 ----DGLALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLKSKQEERESR 248
+ + +TA ++GL+ L + + P T E M A ++++AE+ L++ + R
Sbjct: 268 DRPKEDVTVTAFMAGLRKGDFLYELCKDPPETMSELMYEATKHMNAEDALEAMDDPPPKR 327
Query: 249 GVSLSDYHREDRAKRCRAEDRSRGRHEQFSPNGRGLAEAKELRGLAEPKAKFDKYTPLTA 308
R EDR +Q P E E + P KF +TPL
Sbjct: 328 --------------RKETEDRKPEPAKQKVPK---FTETPERKRTTAPPVKFSSFTPLNT 387
Query: 309 SLEQVLAAIQDTNLLKRPERLRSDPDRRNRNKYCMFHGDRGHTTRECIQLRDEIETLIRE 368
++++L IQD L+ P ++RSDP+ R +N YC FH D GH T++C+ L +++ETLIR+
Sbjct: 388 PIDKLLLQIQDDPSLRWPGKIRSDPNNRPKNLYCRFHRDHGHLTKDCVALTEQVETLIRQ 447
Query: 369 GYLKEFVRHDRGKRPV-------QKEPGKGGNNPPLEIRTILGGPTRGESSK-KRKAAIR 428
G L+++V RP Q EP + P EIRTI+GGP G +S+ R+A R
Sbjct: 448 GKLQKYVSRPANARPAKPPAEREQAEPNR--PEPVGEIRTIIGGPASGGTSRASRRAYAR 507
Query: 429 EAH-----------------------------MEP------------GEQVSPRGSIELP 488
+AH +P G++V P G + LP
Sbjct: 508 QAHNIMVVQRPPKNVRLDDQIISFSEEDARGTHQPHDDALVITVNIAGDKVCPVGIVTLP 567
Query: 489 VTFGEGPQTVTRMVSFLVVDCVPAYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGEVR 499
+T G P+TV++ V FLVV+C AYNAI+GRPTL+ L+AV STYH +LKFPTE G+GEVR
Sbjct: 568 ITVGTHPKTVSKTVDFLVVNCPSAYNAIIGRPTLNRLQAVTSTYHLLLKFPTEHGIGEVR 621
BLAST of Spg033846 vs. ExPASy TrEMBL
Match:
A0A2N9GNB7 (Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS28616 PE=4 SV=1)
HSP 1 Score: 213.0 bits (541), Expect = 3.0e-51
Identity = 148/451 (32.82%), Postives = 221/451 (49.00%), Query Frame = 0
Query: 129 RTENEDIEGFIGQMEPPFTDEIMGGGSK-IPGKSIGSFKEL----VRAFVEGYD------ 188
+ E+E I F+ Q+ F D +G + P + S K++ +R FV ++
Sbjct: 264 KLESESIGSFV-QLSRAFIDHFIGSQRRGRPPTHLLSVKQMEGESLRTFVHRFNEEAMKI 323
Query: 189 ----DGLALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLKSKQEERESR 248
+ + +TA ++GL+ L + + P T E M A ++++AE+ L++ + R
Sbjct: 324 DRPKEDVTVTAFMAGLRKGDFLYELCKDPPETMSELMYEATKHMNAEDALEAMDDPPPKR 383
Query: 249 GVSLSDYHREDRAKRCRAEDRSRGRHEQFSPNGRGLAEAKELRGLAEPKAKFDKYTPLTA 308
R AEDR +Q P +E E + P KF +TPL
Sbjct: 384 --------------RKEAEDRKPEPAKQKVPK---FSETPERKRTTAPPVKFSSFTPLNT 443
Query: 309 SLEQVLAAIQDTNLLKRPERLRSDPDRRNRNKYCMFHGDRGHTTRECIQLRDEIETLIRE 368
++++L IQD L+ P ++RSDP+ R +N YC FH D GH T +C+ L++++ETLIR+
Sbjct: 444 PIDKLLLQIQDDPSLRWPGKIRSDPNNRPKNLYCRFHRDHGHLTEDCVALKEQVETLIRQ 503
Query: 369 GYLKEFVRHDRGKRPV-------QKEPGKGGNNPPLEIRTILGGPTRGESSK-KRKAAIR 428
G L+++V RP Q EP + G P EIRTI+GGP G +S+ RKA R
Sbjct: 504 GKLQKYVSRPANARPTKPPAQREQAEPNRPG--PVGEIRTIIGGPASGGTSRASRKAYAR 563
Query: 429 EAH-------------------------------------------------MEP----- 488
+ H + P
Sbjct: 564 QVHNVMVVQRPPKNIRLDDQGFTTRRVMIDNGSSADILYLPAYQQMRIDKDKLRPMDAPL 623
Query: 489 ----GEQVSPRGSIELPVTFGEGPQTVTRMVSFLVVDCVPAYNAILGRPTLHGLKAVAST 499
G++V P G + LP+T G P+TV++ V FLVV+C AYNAI+GRPTL+ L+AV ST
Sbjct: 624 VGFTGDKVCPVGIVTLPITVGTHPKTVSKTVDFLVVNCPSAYNAIIGRPTLNRLRAVTST 683
BLAST of Spg033846 vs. ExPASy TrEMBL
Match:
A0A2N9H7V3 (Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS35602 PE=3 SV=1)
HSP 1 Score: 210.7 bits (535), Expect = 1.5e-50
Identity = 148/450 (32.89%), Postives = 221/450 (49.11%), Query Frame = 0
Query: 129 RTENEDIEGFIGQMEPPFTDEIMGGGSK-IPGKSIGSFKEL----VRAFVEGYD------ 188
+ E+E I F+ Q+ F D +G + P + S K++ +R FV ++
Sbjct: 235 KLESESIGSFV-QLSRAFIDHFIGSQRRGRPPTHLLSVKQMEGESLRTFVHRFNEEAMKI 294
Query: 189 ----DGLALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLKSKQEERESR 248
+ + +TA ++GL+ L + + P T E M A ++++AE+ L++ ++ R
Sbjct: 295 DRPKEDVTVTAFMAGLRKGDFLYELCKDPPETMSELMYEATKHMNAEDALEAMEDPPPKR 354
Query: 249 GVSLSDYHREDRAKRCRAEDRSRGRHEQFSPNGRGLAEAKELRGLAEPKAKFDKYTPLTA 308
R AEDR +Q P E E + P KF +TPL
Sbjct: 355 --------------RKEAEDRKPEPAKQKVPK---FTETPERKRTTAPPVKFSSFTPLNT 414
Query: 309 SLEQVLAAIQDTNLLKRPERLRSDPDRRNRNKYCMFHGDRGHTTRECIQLRDEIETLIRE 368
++++L IQD L+ P ++RSDP+ R +N YC FH D GH T EC+ L+++IETLIR+
Sbjct: 415 PIDKLLLQIQDDPSLRWPGKIRSDPNSRPKNLYCRFHRDHGHLTEECVALKEQIETLIRQ 474
Query: 369 GYLKEFVRHDRGKR----PVQKEPGKGGNNPPL-EIRTILGGPTRGESSK-KRKAAIREA 428
G L+++V R P Q+E + P+ EIRTI+GGP G +S+ RKA R+
Sbjct: 475 GKLQKYVSRPTNTRPSKPPAQREQAEHNRPGPVGEIRTIVGGPASGGTSRASRKAYARQV 534
Query: 429 H----------------------------------------------MEP---------- 488
H + P
Sbjct: 535 HNIMVVQRPPKNIRLDDQIISFSEEDARGTHQPHDDALVITINIAGQIAPWMPLVDAPLV 594
Query: 489 ---GEQVSPRGSIELPVTFGEGPQTVTRMVSFLVVDCVPAYNAILGRPTLHGLKAVASTY 499
G++V P G + LP+T G P+TV++ V FLVV+C AYNAI+GRPTL+ L+AV STY
Sbjct: 595 GFTGDKVCPVGIVTLPITVGTHPKTVSKTVDFLVVNCPSAYNAIIGRPTLNRLRAVTSTY 654
BLAST of Spg033846 vs. ExPASy TrEMBL
Match:
A0A2N9FPE3 (Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16925 PE=4 SV=1)
HSP 1 Score: 206.5 bits (524), Expect = 2.8e-49
Identity = 144/444 (32.43%), Postives = 217/444 (48.87%), Query Frame = 0
Query: 129 RTENEDIEGFIGQMEPPFTDEIMGGGSK-IPGKSIGSFKEL----VRAFVEGYD------ 188
+ E+E I F+ Q+ F D +G + P + S K++ +RAFV ++
Sbjct: 264 KLESESIGSFV-QLSRAFIDHFIGSQRRGRPPTHLLSVKQMEGESLRAFVHRFNEEAMKI 323
Query: 189 ----DGLALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLKSKQEERESR 248
+ + +TA ++GL+ + + T E M A ++++AE+ L++ + R
Sbjct: 324 DRPKEDVTVTAFMAGLRKGDFFYELCKDPLETMSELMYEATKHMNAEDALEAMDDPPPKR 383
Query: 249 GVSLSDYHREDRAKRCRAEDRSRGRHEQFSPNGRGLAEAKELRGLAEPKAKFDKYTPLTA 308
R EDR +Q P +E E + P KF+ +TPL
Sbjct: 384 --------------RKETEDRKAEPAKQKVPK---FSETPERKRTTAPPVKFNSFTPLNT 443
Query: 309 SLEQVLAAIQDTNLLKRPERLRSDPDRRNRNKYCMFHGDRGHTTRECIQLRDEIETLIRE 368
++++L IQD L+ P ++RSDP+ R +N YC FH D GH T EC+ L++++ETLIR+
Sbjct: 444 PIDKLLLQIQDDPSLRWPGKIRSDPNSRPKNLYCRFHRDHGHLTEECVALKEQVETLIRQ 503
Query: 369 GYLKEFVRHDRGKR----PVQKEPGKGGNNPPL-EIRTILGGPTRGESSK-KRKAAIREA 428
G LK++V R P Q+E + P+ EIRTI+GGP G +S+ RKA R+
Sbjct: 504 GKLKKYVNRPANTRPAKPPAQREQVEHNRPGPVGEIRTIIGGPASGGTSRASRKAYARQV 563
Query: 429 HM-----------------------------------------------------EPGEQ 488
H ++
Sbjct: 564 HNIMVVQRPPKNVRLDDQIISFSEEDARGTHQPHDDALIITVNIAGFTTRRVMVDNGSDK 623
Query: 489 VSPRGSIELPVTFGEGPQTVTRMVSFLVVDCVPAYNAILGRPTLHGLKAVASTYHQVLKF 499
V P G + LP+T G P+TV++ V FLVV+C AYNAI+GRPTL+ L+AV STYH +LKF
Sbjct: 624 VCPVGIVTLPITVGTHPKTVSKTVDFLVVNCPSAYNAIIGRPTLNRLRAVTSTYHLLLKF 683
BLAST of Spg033846 vs. ExPASy TrEMBL
Match:
A0A2N9FYD5 (Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS19666 PE=4 SV=1)
HSP 1 Score: 204.1 bits (518), Expect = 1.4e-48
Identity = 149/492 (30.28%), Postives = 225/492 (45.73%), Query Frame = 0
Query: 129 RTENEDIEGFIGQMEPPFTDEIMGGGSK-IPGKSIGSFKEL----VRAFVEGYD------ 188
+ E+E I F+ Q+ F D +G + P + S K++ +R FV ++
Sbjct: 264 KLESESIGSFV-QLSRAFIDHFIGSQRRGRPPTHLLSVKQMEGESLRTFVHRFNGEAMKI 323
Query: 189 ----DGLALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLKSKQEERESR 248
+ + +TA ++GL+ L + + P T E M A ++++AE+ L++ + R
Sbjct: 324 DRPKEDVTVTAFMAGLRKGDFLYELCKDPPETMSELMYEATKHMNAEDALEAMDDPPPKR 383
Query: 249 GVSLSDYHREDRAKRCRAEDRSRGRHEQFSPNGRGLAEAKELRGLAEPKAKFDKYTPLTA 308
R EDR +Q P E E + P KF +TPL
Sbjct: 384 --------------RKEVEDRKPEPSKQKVPK---FTETPERKRTTAPPVKFSSFTPLNT 443
Query: 309 SLEQVLAAIQDTNLLKRPERLRSDPDRRNRNKYCMFHGDRGHTTRECIQLRDEIETLIRE 368
++++L IQD L+ P ++RSDP+ R +N YC FH D GH T EC+ L++++ETLIR+
Sbjct: 444 PIDKLLLQIQDDPSLRWPGKIRSDPNSRPKNLYCRFHRDHGHLTEECVALKEQVETLIRQ 503
Query: 369 GYLKEFVRHDRGKRPV-------QKEPGKGGNNPPLEIRTILGGPTRGESSK-KRKAAIR 428
G L+++V RP Q EP + G P EIRTI+GGP G +S+ RKA R
Sbjct: 504 GKLQKYVNRPTNTRPAKPPVQREQAEPNRPG--PVGEIRTIVGGPASGGTSRASRKAYAR 563
Query: 429 EAH--------------------------------------------------------- 488
+ H
Sbjct: 564 QVHNIMVVQRPPKNIRLDDQIISFSEEDARGTHQPHDDALVITINIAGFTTRRVMVDNGS 623
Query: 489 -------------------MEP---------GEQVSPRGSIELPVTFGEGPQTVTRMVSF 513
+ P G+++ P G + LP+ G P+TV++ V F
Sbjct: 624 SADILYLPAYQQMQLDKDKLRPMDAPLVGFTGDKICPVGIVTLPIMVGTHPKTVSKTVDF 683
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A2N9F5L1 | 4.7e-52 | 33.87 | RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10315 ... | [more] |
A0A2N9GNB7 | 3.0e-51 | 32.82 | Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS28616 PE=4 SV=1 | [more] |
A0A2N9H7V3 | 1.5e-50 | 32.89 | Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS35602 PE=3 SV=1 | [more] |
A0A2N9FPE3 | 2.8e-49 | 32.43 | Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16925 PE=4 SV=1 | [more] |
A0A2N9FYD5 | 1.4e-48 | 30.28 | Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS19666 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |