Spg033496 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg033496
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionLegume-specific protein
Locationscaffold5: 1764692 .. 1764967 (-)
RNA-Seq ExpressionSpg033496
SyntenySpg033496
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGGTTTAATTCCCTTCGTTTACAAAGCGATCGTTCAATACAAGAATGAAAAACAAGTGCCGCCGATTCGCTCTTGGCTCGGCGACTCGCCGTCGGCGTCCTACATCAGACTTCCGAGCGGCGATTCCGGCCGATTTCAGTTCCAATCCGACGCCTCCTATTCCGCCGCGTCACCTTCGAAATCAGCCACTTCCACCGCCACCCAGATTCTCGTTTCTACCGGAGTTCAGTCGCCGCTCCGCCATCTGACGCCTCGTCGGGTCGCCGCCTGA

mRNA sequence

ATGGAAGGTTTAATTCCCTTCGTTTACAAAGCGATCGTTCAATACAAGAATGAAAAACAAGTGCCGCCGATTCGCTCTTGGCTCGGCGACTCGCCGTCGGCGTCCTACATCAGACTTCCGAGCGGCGATTCCGGCCGATTTCAGTTCCAATCCGACGCCTCCTATTCCGCCGCGTCACCTTCGAAATCAGCCACTTCCACCGCCACCCAGATTCTCGTTTCTACCGGAGTTCAGTCGCCGCTCCGCCATCTGACGCCTCGTCGGGTCGCCGCCTGA

Coding sequence (CDS)

ATGGAAGGTTTAATTCCCTTCGTTTACAAAGCGATCGTTCAATACAAGAATGAAAAACAAGTGCCGCCGATTCGCTCTTGGCTCGGCGACTCGCCGTCGGCGTCCTACATCAGACTTCCGAGCGGCGATTCCGGCCGATTTCAGTTCCAATCCGACGCCTCCTATTCCGCCGCGTCACCTTCGAAATCAGCCACTTCCACCGCCACCCAGATTCTCGTTTCTACCGGAGTTCAGTCGCCGCTCCGCCATCTGACGCCTCGTCGGGTCGCCGCCTGA

Protein sequence

MEGLIPFVYKAIVQYKNEKQVPPIRSWLGDSPSASYIRLPSGDSGRFQFQSDASYSAASPSKSATSTATQILVSTGVQSPLRHLTPRRVAA
Homology
BLAST of Spg033496 vs. NCBI nr
Match: KAG6596392.1 (hypothetical protein SDJN03_09572, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 150.6 bits (379), Expect = 6.5e-33
Identity = 77/91 (84.62%), Postives = 82/91 (90.11%), Query Frame = 0

Query: 1  MEGLIPFVYKAIVQYKNEKQVPPIRSWLGDSPSASYIRLPSGDSGRFQFQSDASYSAASP 60
          MEGLIPFVY+AIV YKN+KQVPPIRSWL DSPSASYIRLPSGDSGRF FQSD SY+A SP
Sbjct: 1  MEGLIPFVYRAIVHYKNDKQVPPIRSWLTDSPSASYIRLPSGDSGRFLFQSDGSYTATSP 60

Query: 61 SKSATSTATQILVSTGVQSPLRHLTPRRVAA 92
          SKS +STATQILV+TGVQSPLR L P RVAA
Sbjct: 61 SKSVSSTATQILVATGVQSPLRQLAPSRVAA 91

BLAST of Spg033496 vs. NCBI nr
Match: KAG7027938.1 (hypothetical protein SDJN02_09117, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 147.9 bits (372), Expect = 4.2e-32
Identity = 76/91 (83.52%), Postives = 81/91 (89.01%), Query Frame = 0

Query: 1  MEGLIPFVYKAIVQYKNEKQVPPIRSWLGDSPSASYIRLPSGDSGRFQFQSDASYSAASP 60
          MEGLIPFVY+AIV YKN+KQVPPIRSWL DSPSASYIRLPSGDSGRF FQS  SY+A SP
Sbjct: 1  MEGLIPFVYRAIVHYKNDKQVPPIRSWLTDSPSASYIRLPSGDSGRFLFQSGGSYTATSP 60

Query: 61 SKSATSTATQILVSTGVQSPLRHLTPRRVAA 92
          SKS +STATQILV+TGVQSPLR L P RVAA
Sbjct: 61 SKSVSSTATQILVATGVQSPLRQLAPSRVAA 91

BLAST of Spg033496 vs. NCBI nr
Match: KAG7017269.1 (hypothetical protein SDJN02_19132, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 147.1 bits (370), Expect = 7.2e-32
Identity = 80/92 (86.96%), Postives = 83/92 (90.22%), Query Frame = 0

Query: 1  MEGLIPFVYKAIVQYKNEKQVPPIRSWLGDSPSASYIRLPSGDSGRFQFQSDASYSAASP 60
          MEG+IPFVYKAIVQYKNEKQVP IRSWL DSPS SYIRLPSGDSGRFQ   D SYSAASP
Sbjct: 1  MEGIIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQ---DGSYSAASP 60

Query: 61 -SKSATSTATQILVSTGVQSPLRHLTPRRVAA 92
           SKSA+ST TQIL+STGVQSPLRHLTPRRVAA
Sbjct: 61 SSKSASSTTTQILISTGVQSPLRHLTPRRVAA 89

BLAST of Spg033496 vs. NCBI nr
Match: KAA0044116.1 (legume-specific protein [Cucumis melo var. makuwa] >TYK25022.1 legume-specific protein [Cucumis melo var. makuwa])

HSP 1 Score: 146.0 bits (367), Expect = 1.6e-31
Identity = 79/91 (86.81%), Postives = 82/91 (90.11%), Query Frame = 0

Query: 1  MEGLIPFVYKAIVQYKNEKQVPPIRSWLGDSPSASYIRLPSGDSGRFQFQSDASYSAASP 60
          MEGLIPFVYKAIVQYKNEKQVP IRSWL DSPS SYIRLPSGDSGRFQFQSDAS S+ SP
Sbjct: 1  MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSP 60

Query: 61 SKSATSTATQILVSTGVQSPLRHLTPRRVAA 92
          + S  +TATQILVSTGVQSPLRHLT RRVAA
Sbjct: 61 TSS--TTATQILVSTGVQSPLRHLTTRRVAA 89

BLAST of Spg033496 vs. NCBI nr
Match: KAG6580521.1 (hypothetical protein SDJN03_20523, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 145.6 bits (366), Expect = 2.1e-31
Identity = 79/92 (85.87%), Postives = 82/92 (89.13%), Query Frame = 0

Query: 1  MEGLIPFVYKAIVQYKNEKQVPPIRSWLGDSPSASYIRLPSGDSGRFQFQSDASYSAASP 60
          MEG+IPFVYKAIVQYKNEKQVP IRSWL DSPS SYIRLPSGDSGRFQ   D SYSAASP
Sbjct: 1  MEGIIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQ---DGSYSAASP 60

Query: 61 -SKSATSTATQILVSTGVQSPLRHLTPRRVAA 92
           SKSA+ST TQIL+STGVQSPLRHLTPRRV A
Sbjct: 61 SSKSASSTTTQILISTGVQSPLRHLTPRRVVA 89

BLAST of Spg033496 vs. ExPASy TrEMBL
Match: A0A5D3DNC7 (Legume-specific protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001410 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 7.8e-32
Identity = 79/91 (86.81%), Postives = 82/91 (90.11%), Query Frame = 0

Query: 1  MEGLIPFVYKAIVQYKNEKQVPPIRSWLGDSPSASYIRLPSGDSGRFQFQSDASYSAASP 60
          MEGLIPFVYKAIVQYKNEKQVP IRSWL DSPS SYIRLPSGDSGRFQFQSDAS S+ SP
Sbjct: 1  MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSP 60

Query: 61 SKSATSTATQILVSTGVQSPLRHLTPRRVAA 92
          + S  +TATQILVSTGVQSPLRHLT RRVAA
Sbjct: 61 TSS--TTATQILVSTGVQSPLRHLTTRRVAA 89

BLAST of Spg033496 vs. ExPASy TrEMBL
Match: A0A0A0LD26 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G733930 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 3.0e-31
Identity = 78/91 (85.71%), Postives = 81/91 (89.01%), Query Frame = 0

Query: 1  MEGLIPFVYKAIVQYKNEKQVPPIRSWLGDSPSASYIRLPSGDSGRFQFQSDASYSAASP 60
          MEGLIPFVYKAIVQYKNEKQVP IRSWL DSPS SYIRLPSGDSGRFQFQSDAS S+ SP
Sbjct: 1  MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSP 60

Query: 61 SKSATSTATQILVSTGVQSPLRHLTPRRVAA 92
          +   +ST TQILVSTGVQSPLRHLT RRVAA
Sbjct: 61 T---SSTTTQILVSTGVQSPLRHLTTRRVAA 88

BLAST of Spg033496 vs. ExPASy TrEMBL
Match: K7MT87 (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_18G187300 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 2.8e-21
Identity = 63/94 (67.02%), Postives = 77/94 (81.91%), Query Frame = 0

Query: 1  MEGLIPFVYKAIVQYKNEKQVPPIRSWLGDSPSASYIRLPSGDSGRFQFQSDA-SYSAAS 60
          MEGLIPFVYKAI+QYK +K   PI SWL +SPS SY+RLP+GDSGRFQ Q+ A S+SAAS
Sbjct: 1  MEGLIPFVYKAIMQYKGDKDGHPIGSWLCESPSYSYMRLPAGDSGRFQIQAPASSFSAAS 60

Query: 61 PSKS--ATSTATQILVSTGVQSPLRHLTPRRVAA 92
          PS +   +S+ATQI+VS+GVQSP + LT RR+AA
Sbjct: 61 PSSTNPNSSSATQIIVSSGVQSPHQCLTHRRIAA 94

BLAST of Spg033496 vs. ExPASy TrEMBL
Match: A0A0B2P904 (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_048924 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.8e-20
Identity = 62/94 (65.96%), Postives = 76/94 (80.85%), Query Frame = 0

Query: 1  MEGLIPFVYKAIVQYKNEKQVPPIRSWLGDSPSASYIRLPSGDSGRFQFQSDA-SYSAAS 60
          MEGLIPFVYKAI+QYK +K   PI SWL +SPS SY+RLP+GDSGRFQ Q+ A S+SAAS
Sbjct: 1  MEGLIPFVYKAIMQYKGDKDGHPIGSWLCESPSYSYMRLPAGDSGRFQIQAPASSFSAAS 60

Query: 61 PSKS--ATSTATQILVSTGVQSPLRHLTPRRVAA 92
          PS +   +S+ATQI+VS+GVQSP + LT R +AA
Sbjct: 61 PSSTNPNSSSATQIIVSSGVQSPHQCLTHRPIAA 94

BLAST of Spg033496 vs. ExPASy TrEMBL
Match: A0A6J1AT90 (uncharacterized protein LOC110420657 OS=Herrania umbratica OX=108875 GN=LOC110420657 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 9.0e-20
Identity = 60/98 (61.22%), Postives = 75/98 (76.53%), Query Frame = 0

Query: 1  MEGLIPFVYKAIVQYKNEKQVPPIRSWLGDSPSASYIRLPSGDSGRFQ------FQSD-A 60
          MEGLIPFVY+AIVQYKN ++   + +W  +SPSASY+RLP+GDSGRFQ      FQSD  
Sbjct: 1  MEGLIPFVYRAIVQYKNGRE-GVLATWFSESPSASYMRLPTGDSGRFQVSDKQVFQSDYG 60

Query: 61 SYSAASPSKSATSTATQILVSTGVQSPLRHLTPRRVAA 92
           +SA+SPS  ATS+ T+I++STGVQSP+  LT RRV A
Sbjct: 61 DFSASSPSSMATSSTTKIILSTGVQSPVCRLTSRRVVA 97

BLAST of Spg033496 vs. TAIR 10
Match: AT2G37750.1 (unknown protein; Has 21 Blast hits to 21 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 46.6 bits (109), Expect = 1.2e-05
Identity = 38/87 (43.68%), Postives = 49/87 (56.32%), Query Frame = 0

Query: 1  MEGLIPFVYKAIVQ--YKNEKQVPPIRSWLGDSPSASYIRLPSGDSGRFQFQSDASYSA- 60
          MEGLIP VYKA++Q  Y NE Q            S+ Y+RLP GDSGRF  +SD   S  
Sbjct: 1  MEGLIPLVYKAVMQIRYGNESQ---------QLSSSYYVRLP-GDSGRF-VRSDLDVSGP 60

Query: 61 ---ASPSKSATSTATQILVSTGVQSPL 82
             +S   S++++ T   V  GVQSP+
Sbjct: 61 GSNSSNRASSSTSTTTFAVYAGVQSPV 76

BLAST of Spg033496 vs. TAIR 10
Match: AT5G02090.1 (unknown protein; Has 30 Blast hits to 30 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 41.2 bits (95), Expect = 5.2e-04
Identity = 32/83 (38.55%), Postives = 44/83 (53.01%), Query Frame = 0

Query: 1  MEGLIPFVYKAIVQYKNEKQVPPIRSWLGDSPSAS--YIRLPSGDSGRF------QFQSD 60
          MEGLIPF+YKAIV YK E     +      SPS +  Y+RLP   S RF      +F +D
Sbjct: 1  MEGLIPFLYKAIVMYKREGSFSSVLLSDHHSPSNAGYYMRLPGDSSSRFRTSDLRRFGTD 60

Query: 61 -----ASYSAASPSKSATSTATQ 71
                +  ++SPS+ +T   T+
Sbjct: 61 RFGMLETTPSSSPSRVSTRNITK 83

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG6596392.16.5e-3384.62hypothetical protein SDJN03_09572, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7027938.14.2e-3283.52hypothetical protein SDJN02_09117, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG7017269.17.2e-3286.96hypothetical protein SDJN02_19132, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAA0044116.11.6e-3186.81legume-specific protein [Cucumis melo var. makuwa] >TYK25022.1 legume-specific p... [more]
KAG6580521.12.1e-3185.87hypothetical protein SDJN03_20523, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3DNC77.8e-3286.81Legume-specific protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0LD263.0e-3185.71Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G733930 PE=4 SV=1[more]
K7MT872.8e-2167.02Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_18G187300 PE=4 SV=1[more]
A0A0B2P9041.8e-2065.96Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_048924 PE=4 SV=1[more]
A0A6J1AT909.0e-2061.22uncharacterized protein LOC110420657 OS=Herrania umbratica OX=108875 GN=LOC11042... [more]
Match NameE-valueIdentityDescription
AT2G37750.11.2e-0543.68unknown protein; Has 21 Blast hits to 21 proteins in 7 species: Archae - 0; Bact... [more]
AT5G02090.15.2e-0438.55unknown protein; Has 30 Blast hits to 30 proteins in 10 species: Archae - 0; Bac... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34670EXPRESSED PROTEINcoord: 1..91
NoneNo IPR availablePANTHERPTHR34670:SF10LEGUME-SPECIFIC PROTEINcoord: 1..91

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg033496.1Spg033496.1mRNA