Spg033453 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg033453
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	elongation factor P
Location	scaffold5: 524886 .. 535610 (-)
RNA-Seq Expression	Spg033453
Synteny	Spg033453

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTGAGGGCAAACGAAGCGCGGGTCAAACCGAAGTGGTTCGAGGTCCGATTTCAAGTGGGTCTCATCGGAATTCGTGGATTTTTGCGAGGGTGAGGCTGCAGCAGTCACGGCCGCCGGCTGTCGAGGAAGCAGGGCGTTTCGCGCGGGTGAGGTCGCGCCGTCGAGTGCACAGGGGCCGTCGTTCAACGCTGCACGTGGAGGATCACCGCACGCTGGGTGAAGATAAATATTTACATCATACCTTATTTTTTTTTGTTTAGTGCTCCAAATAAAGACTATAATACATACGACGATAGTATTATTTTTCTCTTGAAGATAGTAGTTCCCTTTTATATTGTTGTTTGTTTTTGGGAATAAGATAACATTCACATCATAACTTATTTTCGTTTATATTGATCTTCTTTGAACTTTATTGCATCAGAAAGCAAAAAAATAAAAAAGAAAAAAGGAGGATGAGAATGTTGCAATGCACGATTACACTAATTTAGTTGGGATGGGACAGCCAGATGTAAGCTATGGGTGGAAACCACGAAGCCCATAACCACAGTTTTCTGCTAATTCCGTCTCTGTCGAGTGGGCGTGATCTCCACTTCTGTAGACGAGGACACACATGTAACCACATAAAATGCCTTGAAAGTCATGTCAGAATTTACACAGTGAGTGACAACATTGAGGAAACTTGGAGATTATGGAATAGCAACAAAGGTTTACAGTGAGGTTGAAGGGTTGTTTAAAATATATTGGCTTCAAACTTGCAATGTTCAAACGAGGGTGAGTATTATACACTATCTGTGTTGACAGGTGAATAGACGAGCAAAAATAAACTATAAAGATGACAACAAATTGTTGTTTCAAACTCTCATGACATCTTGATCTACACTAGTTTGTGTTGTTGGAGATGTCTATAGAGTAAAAAAAGGATAGTAACAAATATTGACAAGAAACTCACTATGTGTCCCTATGTGTTGCTCGAAATAAAGAAAAAAAATGATGTTAGCATATATCAACAACAAAGTGTGTTCGGGTTAGTTTAACAAATGTGGAGTTGAATTTTCAATTTTAGAGAATAATAAGTGTTTTATTCGTTGAAATATACTCATATATTGATAAGAATGTCAACAACTTTTGATTTCAAATGCATCACACCTATCATAGATTTTGATTAAGAAAAATTAATAAAAAGATCAAGACACCTTTTTTTTTAGAATAATACAATAACAAATCTGGGTTCCAAACATATCATGTAACATTATGACCAAACTTAGTAATTTAACCTAACAAGTATATATGTGTATATGATGTATGTATGTATATATATATTTTAAACTCATCAACATTTGGAGGTGGGAGATTCGAATCTCTGACCTTTTGGTCGAAAGTATATGTCAATTATGGCTAAGCTATGTTCATTATGACCTTAACAAATATATAATTAAATACAATGTTAGAGCAATTAATATTGTAATATATACTAACAACATAGACATCTTATTACCTTTCTTTTTTTTTTTTTTTAAAATCATCTTATTACCTTTCTTTAACGTAGCTAACAAAAGTAATTTTTTTTATGATTTTTAGAACAAATTATACTTTTAAAACAGTCAAAGATAATGTATGAACTGTTAATTACAAATTTTACTTAAAAAAACGAAAAAAAAGGACTGTCAATTAAAAGAAAAAAATGGGTGGGGGAATTTTGTGAAAGAAGTTTTACTGACACAAGTGCTTATTTCATGTTCTCAAACAATAAACATGGCGGTAAAAGGTGAAATCCTGCCCTCCCAGTCCTTATCTCAGTCTCGGCGGGACGCCTCACTCATTTCCTGCCATTCTGCCTCTGCGTAAGACTCGAGGGGGAGCGCTCAGAAAAACCACTTAGAGTTGCCGAGACGCTCCAGGACATGGCTGACATCCTCCTCTGTAATGCCTCGTTGGCTTCTGCTTTTATCGGCCGCCGCTCATCGTCAACGACTTCGCTTTCGCTGTCTTTGAAGCCGTCCGTTCTTCGAATACGGCGGGTTTCCTTCCCAAGTTCCCGTACCGGATTTTCGAGTAAACCCTTCGATTCTCGCATTGCAATTTTTCATTTCTGAATGTTCGACTGAGTATCATTCCCGCGGCTCTAGCATTGTAATTTCTGTTGTACTTCCAGGGATTTATGCGTTAACTAGCAACGACATCAAAGTTGGCACCAATATTGAAGTGGATGGAGCTCCTTGGCGGGTATTAGGTTGTTCTTCTCCCCCAAGTCTAATTTTTCCCTTCCCCAACCATTGTCTGTTGCTACTCGATTTTTCAAGCTGAAGTGAGCCGTACTTGAACCTTTTTTTTTTCTTTTTAATTTTTTTTCCTGTTTCTGGATAGAGTTCCTTCATGTCAAACCCGGCAAAGGAGCAGCTTTCGTAAGGACCAAAATTCGCAATTATGTAACAGGAAATACGGTTGAGAAAACTTTTCGAGCAGGAAGCTCGGTGAGTAGCAGAATTATTATCTGGTCATGCGTGATAGACTTTTAGCTCATATTTATTCAAACCTCTAATCAGTACTAAACGGTTCAATATCGTCCACTCCATTTCCCGTTGATTTTGGTAGATAACATACCTTTCGCTTAAATTGAACTCTGATGTCTGATTCAGCTTTTATTTCATTGATATCCCCACCGTATAACCGGGCTAGAAAGTTATGGGAGCTTTATAGCTACTCATAAAGACTCGCTTGCGAGAAAGTGAAAAAGGAATTGTCATCAGGTGTAAAATTGGCATTATCAGCGGGTTATATGATGTAATTTGCAACTACTACTTTGGATCTCATGTAATAATCAAAACATATCCATCTGCAAGATTTTAACAACTATGTAGAAAACAGGATGCTATAACCAACCACAACTAGAAATGAATTATGCCCTCAAATTCTTTCTCAAGACCTTGATTCCGTAAAAGACGTGCTACAAGTGTGACGTTCCTTCTCTCATACTTTCTTTCACGTCCATTATTGTGTATTTATGTATAATTGTCTTTCCAGCTTGACGAGGCCAATGTATACAAGGAAGTCAAGCAGTTCACTTACAAGGACGGTTCCCAGTTTGTTTTCATGGATCTGGTACATAAATGTATATTTAGTTGTGATTTGGTCGTTATTGGCACCTTTCTAACAAGTCACAGAATTTCTCTCTGGACGACTTGATATGTAGGGTAGCTCTTCTCATAGTCACGTTCTATGTGAAGCTAGTTAGTGAATAAATTTAGTTTGCTAGTCCTCACCAGCATCAAATGAGTCTAAGTGGCTCGTTTTACAGAATACCTATGAAGAAATACGCCTAAATGCAGCAGATGTTGGTGATAGGACAAAGTGGCTGAAAGAAGGAATGGACTGCATCGTATTGTTTTGGAATGGGAAGGTAAATCCGGTCACTTGGACAGCTTTTGACAGGCTGTTTTTACTGTGTTGCCCGTTTAGAGTTGATCATGCTGTTCTTAAATAGCTCACGTCATGGGTCACTCTTAAAAAATACGATAAAATTGAGCATCTTTCCTATTTCTTGATGAACGAGTCGCATGTCTTGAACTTTGCTACAAAGTGTCACTATGTCAGTGTTGCATCAGTTAACAAGAAGTGAATTATAATGATAATAATCATTGAATTTTCTCGTTTCTTTGTTCTCCCATCTTTTAGGTTATTGATTTTGAGGTTCCCATCACAATTCAATTGACTGTGGTTGACGTTGATCCTGGACTGAAAGGTGACACGGCTCAAGGTACCACTCTTTTACTTGTCTTTTAAGGACCAACAATCTTTTTTAATGCTTTGTTGATAGGTTGCAATCAGATAAGGTTCTTTGAATTCAAATGGGCTAAAATTTCCTTACGAATTACAAACATATTTAAGCAGGATTCGATTAGTGCACAAAATTAATCTTTTTTTTTTTTTTTTTTGAAAAACACAAAATTAATCTTTTTATACCATTATATTAGCAACTTCTAACATTTTCTTATTAAAACAGTAAATTAATAGTTATTAATTGAAAAAATAATTTTGGAGAAGAGTTGTTATTACTTTTAGTTGCTTTCATACACACTTAATGGAGCTTAACGTCTGGATACCAAGGGGATTTTGCTAATTACCCGAAAGCACAATAGGATATTTCCCTTTAGCATTTCACATTCTGTGATTCTCGAGGACAAAAATGTAGTTAACCTTGTTGTAATGTTGTCATTTATTGTAGAATAGTTCACAAACATCACAAAGGTATAGTAATTTATTAATTGGTATAGTAATTGTTTGAATCAATGACTGGAGTTTTAGCACTTAATCAAGTAATAGAGCATCATTTTTGGTGCTCAATGTTTAAATGCAGATCATATTTTATACTTGTAATTGCATTAATATACTGTCATGTAGATATCTAGATGTTAACAAAAAATAAAGAATTTAGTTTAATATGATAATTAAGTAATCATACTGGCGAATAATTTATTTCTGAGAACCAAAAAGATGCTCTTGGTGCTCATTCTGAGCACTATGATGACTTAATGCCAAACTTTCATATCGCAGACTGATTTCATGGACTTTTCTTGGTTGATTCGTTACTTAAATAACGACGTTTTGTTTTAACACATTATATTATGTCTTAACAGATCAAAAAAAAGAGACATATCACGAGAAGAAGAGGAAAGAAAAAAACCACAATATGCAAGAGAAAACCCTTTGCTTCTATATATTTAAGCATGAATTTTACAGCCATATATATAGAGGCCTGGGGAGAAAAACTCTTGCAAAAAAGACCATAGAAAAACTTTCGCTCAGCTCTCTCTCGAATCTTCTTCTCTCCTTGCTAATTTCCACCTGCAGATAGAATATATTTGCAACAACCCTAAAATACACGGGCTGATAAAGAGGGCAGAGAATGGGCCTAAAGCAAATGGGCCAGTTTATAAACATTTACAAGAGAATGTTAATGGGCTATCTTAACACCCCCCCGCAAGCCAATGGCAGTGGCATCACGAACATTGAGCTTGAAACGCAGCTGATTAAAGGAGGTAGCCGACAAAGGCTTGGTGAAAATATCAGCCACTTGCTCAGTAGCTGGTAGATGTTGAACCACGATTTTCTTGTTGAGCACCAAGTCTCTTACAAAGTAGATGTCCAGCTCTACATGCTTTGTTTTAGAATGAAGTATGGGATTCACACTTAGATGGACTGCACTTAAGTTGTCACACCAAACAATAGGGGGGTTAGAAAGATGAATATGTAAATCAGAGAAGAGAGATTTAAGCCAAACCAACTCAGCAGCAATGGTTGCAAGGCTGCGATATTCAGCCTCAGTGCTTGAACGAGAGATGATGCTCTGCTTTTTAGAGCCCCATGTAATTAAGTTACCACCGAAAAAAGCACAGAAACCAGTAGTACTTTTCCTATCATCAGGATCAGATGCCCAGTCGGCATCAGCAAAGCCATATAAGAATAAATTTTTGGGTTTCATAAGCAGTAAACCAGTGGATAGAGTACCCTTCAGATAACGTAAAATGCGTTTAACAAGCTGCCAGTGAATGAGTTTAGGATGATGCATAAACTGGCATGCTTTATTAACACTAAATGAAATTTCAGGTCTAGTTAATGTCACATATTGCAGAGCACCCACGATGCTTCTGTACAAGTAAGTGTCTTGAAAACACTCACCTTGAAATGCTGAGACAGTGGAGCCACTCACCATAGGTGTAGCAATAGAGTTTGCATCCCGCATATTTGCTCGAGAAAGTATGTCTGTAATGTAGGTTGATTGGGACAAAAAGAGACCGCCATTAGATGGATAAGACACCTCAATGCCCAAAAAATAATTCAGCTTACCCAGATCTTTTAACGAAAACTGATTGTTTAAAGAGGTGATCAGAGTTGTAACCTCAGCATCCGAGTTCCCCAAGATAATAATATCATCGACATAAATTAGAATGTAACAGCAGGAAGATGCAGAATTTCTAATCATTAGAGAAGGATCAGCTTTTGAAGTTTTAAAACCAAGAGTTTGAAGGAACCTGTTGAGTCGATCATACCACGCACGAGGGGCCTGTTTTAGCCCATATAGCGCCTTTTTGAGTCTACAAACAAGTCCTTGAGTACCTGCACTTTTGAAACCAGATGGCTGATCCATATAGACCAATTCGGTTAGTTGACCATGTAGGAAAGCATTATTAACATCAACTTGTCTCATAGTCCAACCATAGTACAAAGCAAGGGTTAAGAGCACGCGAATTGTGATTGGTTTTACTACTGGACTAAACGTCTCAGTGTAATCAATATCAACCGTTTGATGAAAGCCCTTGGCTACAAGACGGGCCTTATATCGAGAGATGGATCCATCAGAATTTCTTTTTATTCGAAATATCCATTTGCAGCCAACCGTTTTCTTGTCTTTGGGCATTGGAACCAAGTCCCAAGTATCATTCTTAATTAGAGCATCATACTCCTCCTTCATTGCCTTTAACCAATGTGGTGACTTTAAAGCCTCCGTGACATTTGGTGGCTCAGTGTCGAGATATAGGGTAGATGTATCAGTGATATAAGCTTTAGGCTTAAAAATGCCATGTTTTGCACGAGTCATCATGTGGTGCTCATTGGTAACAGAGGTTGGAGGAGGAGGTGGCGGTGGCAGAGAGACAACTGGACTAGGAGAAGGGTTGTCATTAGTGGGAGGATATGTCGATGAGGAAGCAGGTGCGAGGGGAATAGGAGCAAGGTCCGTACTTGATTGAGGAGTAGAAGGTGTGGCTGAGATTGATGTTGGAACAGTCTCAGGAGGTGGTAAAAGCACATTGGATGAGTAAGAGATTGATGAGATTGAGTGGGAGGTAGAAAAAGGAAAGCTATTTTCATTGAACAGAACATTCCGAGATATAAATATACGACCATCAGGAGCAAGACATTTATACCCTTTATGAGAGGGGCTGTAACCGAGAAAGACACAGGGTTTGGATCGATAGGCAAGCTTGTGAGTGTTGTAAGGTCTAAGACATGGAAAACATGCACAACCAAAGACTTTAAGGAATGAGTAATCGGGTAGGGTGTGAAATAATTTCTCCAAGGGACTTTCATGATTCAATGTTGGAGTAGGCAGCCGATTGATGAGATAAACCCCAGTAGCAAACGCCTCATCCCAGTATTTGAGAGGCATTTTGGATTGCGATAAAAGAGCAAGCCCTATATCAATAATGTGCCTATGCTTTCGTTCAACCAACCCATTTTGTTGAGAGGTATGGGGACAAGTAAATCTATGACTAATGCCATTGGACTCTAGGAATGGTTTAAACGCTTGAAACTCTCCCCCGTTATCGGATTGAAGACGTAAGATAGGAGTATTAAGAAGATTTTCCACAAGAGTTTTAAATTTAATGAAAGCCGAAAGAGCTTCTGATTTGGTTTTTAAGAAGTAAACCCAAGTGTATCTGCTATAGACATCTATGAAGCTAATGTAGTATCTGAACCCCTGAGAAGATGGTATGTAAGTAGGACCCCAAAGATCAGTGACAATTAATTGGAGAGGAGCAGTATAGACAGTAGTGGTATTATGAAAAGGGAGAGTGTGATTCTTTCCCATAGCACAAGCAGAACAGAATTGGAAAGTCTTATTTATCAACAGCTGAGGCTTAAACCTCTGTATAACATGTTTGACAGTAGACAAAGAAGAGTGGCCTAGACGCCTATGCCATAAGTCTAACACAGAACACTGATCATTGGAAACATTAGAAGATAACAAATGTTGAGATGTGAGGGCTTGCACTGAAGGTTTATCTCGAGGTTGCTCCAACGAACCAGACAAGTTGAAGCGATAGAGGCCATCATGGAGAGTCCCTTGGAGTAGAACCTGACCAGAGACTTGATCCTTCACATAGCAAAGGGTGGGATGAAACTCAAAATATACACCATTATCTTTAGCAAATTGACTTACACTAATTAGATTTTTTGTAATAGAGGGCACATGAAGTAAGTTATTTAAATGGAACACTCGACTGGAACAGACAGGAGAAGCAAAAGAATTAAAACCAAAATTAAGGATAGGCAAACCTGCTCCATTCCCCACGTGCACTTGATTTCCACCACCGTATTCAGTTCCAACGGAGAGATTGTTGAAGGAATGGGTAAGATGATTGGTAGCACCCGAATCCGGATACCAGTTGGTATCTTGGTTTAAATCAGGGGAAGTAAGCATGGCAGCCATCTGGGGATAAGGAGGAGGGCGGTTAAATTGATTAGAATTTGGAGAAAACGAACCTGGATTGTTTGATGAACCAGAAGGTGCATAACGAAAGAAGCATCTAGGAGCAGTGTGATTGAACTTCCCACAGAGTTGGCACTGTGGTCTATTTCGATTGTTCCAGGAACGACCTCCACGATTCGAGTTGAAAACACCACGGCCACCACCTCTACCTCTGTTTCCACTACCAGGATTAGGAGAAAAATTGTTAGGAGTTGACCGTTGTAAATCAGAATCCGGTGGTTTTGATTGAACCATGAGATTTGCAGAAGGAAGAGAGCTATCAGTAGATGAAATTTTGCTCTCAATCCGGTTTTCTTGAGTCAATAAAAGGGACATAACTTCGTGGACCGTTTGAGGGCCAACTTTCGCAGAAATTACAGATACCATAGATTCATATTCAGTGCCCAGACCAGCTAAAATAAACAGTATATGATCCTCAACTTCCACAGGTTTTCCCACAGCAGCAAGGGCATCAATATACTGTTGTATTTTCGCAAAATATTCCTTTAAAGACATACCTCCTTTTTGAATCGTTTGAAGTTTGGTCTTGATTTTCATCATTTGAGCGAGATTTCGAGTGGTAAAGATCTGTTTGAGACTTACCCAAATTTCCTTAGAAGACGTACAGTGAATCATCTGATGGAGTATCTCCTCAGACATAGAGCCGACAAGCCAAGATGAAATCATGCGATCCTGCTTTTTCCATACGGAATAAACAGGGTTTGGGACCTCTTGTCGAACAGGTTCAGCGGATGAAGTTCCTTCAGTAGCAGTGATTAGGGTTTTAGCGGGTGGGTCTTCTTCAAGATACTTCTCCAGATTATATCCTTCCAGGGCCATAAGGATCTGAAACTTCCATAACAAAAAATTGTCATCAGTAAGTTTAACAATTGAAATTTTGTTACCAGGACTAAATGTCTGAGGAGATGAATTTGCGGATTCCTCCATTGCCGCACTTGTGGAGCTTTCGGTAGACATCAGCACCCACAGTATTCGAAAAAAAATTACAGAAACCCTTGGTCGTTAGACAGTGGGCTCTGATACCATCTTAACAGATCAAAAAAAAGAGACATATCACGAGAAGAAGAGGAAAGAAAAAAACCACAATATGCAAGAGAAAACCCTTTGCTTCTATATATTTAAGCATGAATTTTACAGCCATATATATAGAGGCCTGGGGAGAAAAACTCTTGCAAAAAAGACCATAGAAAAACTTTCGCTCAGCTCTCTCTCGAATCTTCTTCTCTCCTTGCTAATTTCCACCTGCAGATAGAATATATTTGCAACAACCCTAAAATACACGGGCTGATAAAGAGGGCAGAGAATGGGCCTAAAGCAAATGGGCCAGTTTATAAACATTTACAAGAGAATGTTAATGGGCTATCTTAACATTATGGATAATGTATTAACCAAGAGCTACCGCATGTAACTATTTAGATAATGCATCAACCAAGAACTACAACATGTAATCTGGGTAGTGGAAAATGTATCAATCAGGAACTACTGAGGATAGATTTGGCTCATAGGTTAAACAAGGGTGGAATTAAGAAGCCTAGGTTTATGAAATTTATGCTGTGTACTGTGTAGGAAAACAACTATAACCGTCTGAATTATAGTTTGTTTTTAGCCTGTGAGTTTATAATTTGTAAAAGGTAGGTTTCATAACTTGTATTTATGTAACTTGGGTTTATGTAATCCTTCAGATTAGTAAATCCGTTATTTAGGATAAATAACCTACATACCAAAGATAAGTTTGATTTCCTAATCTTAAGTTACATAAATCTAATTCATGCAGTACACATCCCTTAAAAGTTAACGTTTATGTTGATATCTATTACCCACAATCACATGTTTGATATAATGGAGACACTATTTCCCCCCTTCTTCCAGTGACAATGTCATTAACATTGATTACCTTTGAACCTCAATCTTATGGTTTGCGTCTGTGTTGCTGTCGACATTGATTTCCTGGTCTTAGTCATACAAATTGATTTTTCATTTATTTAAAAAAAAAATGATTTTTCATCCATGCGCTGTTCTGTTCTCTCCTCCCACTCTCCAGCCACAATTAATTTTACTTACATTGACAACCTTTTAATTGAAGATGAAATTTCATTGGCAGGTGGTTCGAAGCCCGCAACTCTTGAAACTGGTGCTGTTGTTAATGTCCCTCTGTTTATAAATGTAGGCGATAGTATAGTTATAGATACAAGGACTGGACAATACACGAGCCGGGCATGAATTTGACAGTCTTCGGCGAGAAGGGTTTGTTAGTACTCTTTTAAAGAGCAATTGTTTTGTTGATTCTTTGGTCACGTTGTAGATTGTGCACGTGGAAGACCAGCAGTGGAGCTGCGCAGATTGTCTCCCTGTACTCTTTTGACTATTAAGATTGGGATTCTTTAATTAGTGCTGAAGTATATCAAGTATACCAAATTAGCAACGGAAGAAATTATGTGAAGCAGTTAACTTTTTG

mRNA sequence

TCTGAGGGCAAACGAAGCGCGGGTCAAACCGAAGTGGTTCGAGGTCCGATTTCAAGTGGGTCTCATCGGAATTCGTGGATTTTTGCGAGGGTGAGGCTGCAGCAGTCACGGCCGCCGGCTGTCGAGGAAGCAGGGCGTTTCGCGCGGGTGAGGTCGCGCCGTCGAGTGCACAGGGGCCGTCGTTCAACGCTGCACGTGGAGGATCACCGCACGCTGGTCTCGGCGGGACGCCTCACTCATTTCCTGCCATTCTGCCTCTGCGTAAGACTCGAGGGGGAGCGCTCAGAAAAACCACTTAGAGTTGCCGAGACGCTCCAGGACATGGCTGACATCCTCCTCTGTAATGCCTCGTTGGCTTCTGCTTTTATCGGCCGCCGCTCATCGTCAACGACTTCGCTTTCGCTGTCTTTGAAGCCGTCCGTTCTTCGAATACGGCGGGTTTCCTTCCCAAGTTCCCGTACCGGATTTTCGAGGATTTATGCGTTAACTAGCAACGACATCAAAGTTGGCACCAATATTGAAGTGGATGGAGCTCCTTGGCGGGTATTAGAGTTCCTTCATGTCAAACCCGGCAAAGGAGCAGCTTTCGTAAGGACCAAAATTCGCAATTATGTAACAGGAAATACGGTTGAGAAAACTTTTCGAGCAGGAAGCTCGCTTGACGAGGCCAATGTATACAAGGAAGTCAAGCAGTTCACTTACAAGGACGGTTCCCAGTTTGTTTTCATGGATCTGAATACCTATGAAGAAATACGCCTAAATGCAGCAGATGTTGGTGATAGGACAAAGTGGCTGAAAGAAGGAATGGACTGCATCGTATTGTTTTGGAATGGGAAGGTTATTGATTTTGAGGTTCCCATCACAATTCAATTGACTGTGGTTGACGTTGATCCTGGACTGAAAGGTGACACGGCTCAAGGTGGTTCGAAGCCCGCAACTCTTGAAACTGGTGCTGTTGTTAATGTCCCTCTGTTTATAAATGTAGGCGATAGTATAGTTATAGATACAAGGACTGGACAATACACGAGCCGGGCATGA

Coding sequence (CDS)

TCTGAGGGCAAACGAAGCGCGGGTCAAACCGAAGTGGTTCGAGGTCCGATTTCAAGTGGGTCTCATCGGAATTCGTGGATTTTTGCGAGGGTGAGGCTGCAGCAGTCACGGCCGCCGGCTGTCGAGGAAGCAGGGCGTTTCGCGCGGGTGAGGTCGCGCCGTCGAGTGCACAGGGGCCGTCGTTCAACGCTGCACGTGGAGGATCACCGCACGCTGGTCTCGGCGGGACGCCTCACTCATTTCCTGCCATTCTGCCTCTGCGTAAGACTCGAGGGGGAGCGCTCAGAAAAACCACTTAGAGTTGCCGAGACGCTCCAGGACATGGCTGACATCCTCCTCTGTAATGCCTCGTTGGCTTCTGCTTTTATCGGCCGCCGCTCATCGTCAACGACTTCGCTTTCGCTGTCTTTGAAGCCGTCCGTTCTTCGAATACGGCGGGTTTCCTTCCCAAGTTCCCGTACCGGATTTTCGAGGATTTATGCGTTAACTAGCAACGACATCAAAGTTGGCACCAATATTGAAGTGGATGGAGCTCCTTGGCGGGTATTAGAGTTCCTTCATGTCAAACCCGGCAAAGGAGCAGCTTTCGTAAGGACCAAAATTCGCAATTATGTAACAGGAAATACGGTTGAGAAAACTTTTCGAGCAGGAAGCTCGCTTGACGAGGCCAATGTATACAAGGAAGTCAAGCAGTTCACTTACAAGGACGGTTCCCAGTTTGTTTTCATGGATCTGAATACCTATGAAGAAATACGCCTAAATGCAGCAGATGTTGGTGATAGGACAAAGTGGCTGAAAGAAGGAATGGACTGCATCGTATTGTTTTGGAATGGGAAGGTTATTGATTTTGAGGTTCCCATCACAATTCAATTGACTGTGGTTGACGTTGATCCTGGACTGAAAGGTGACACGGCTCAAGGTGGTTCGAAGCCCGCAACTCTTGAAACTGGTGCTGTTGTTAATGTCCCTCTGTTTATAAATGTAGGCGATAGTATAGTTATAGATACAAGGACTGGACAATACACGAGCCGGGCATGA

Protein sequence

SEGKRSAGQTEVVRGPISSGSHRNSWIFARVRLQQSRPPAVEEAGRFARVRSRRRVHRGRRSTLHVEDHRTLVSAGRLTHFLPFCLCVRLEGERSEKPLRVAETLQDMADILLCNASLASAFIGRRSSSTTSLSLSLKPSVLRIRRVSFPSSRTGFSRIYALTSNDIKVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVTGNTVEKTFRAGSSLDEANVYKEVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVPITIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFINVGDSIVIDTRTGQYTSRA

Homology

[Close]

BLAST of Spg033453 vs. NCBI nr
Match: KAG7027859.1 (efp, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 466.1 bits (1198), Expect = 2.7e-127
Identity = 241/270 (89.26%), Postives = 248/270 (91.85%), Query Frame = 0


Query: 77  RLTHFLPFCLCVRLEGERSEKPLRVAETLQDMADILLCNASLASAFIGRRSSSTTSLSLS 136
           R T FL F  C RLEGERSEKPL VAETL DMAD LLCNASL+SAF+ RRSSS  SLSLS
Sbjct: 5   RPTLFLSF--CARLEGERSEKPLTVAETLPDMADALLCNASLSSAFLARRSSSMASLSLS 64

Query: 137 LKPSVLRIRRV-SFPSSRTGFSRIYALTSNDIKVGTNIEVDGAPWRVLEFLHVKPGKGAA 196
            K SVLR RR  S  +SRT F RIYALTSNDIKVGTNIEVDGAPWRVLEFLHVKPGKGAA
Sbjct: 65  SKSSVLRTRRFSSSANSRTRFLRIYALTSNDIKVGTNIEVDGAPWRVLEFLHVKPGKGAA 124

Query: 197 FVRTKIRNYVTGNTVEKTFRAGSSLDEANVYKEVKQFTYKDGSQFVFMDLNTYEEIRLNA 256
           FVRTKIRNYV+GNTVE+TFRAGSSLDEANVYKEVKQFTYKDGSQFVFMDLNTYEEIRLNA
Sbjct: 125 FVRTKIRNYVSGNTVERTFRAGSSLDEANVYKEVKQFTYKDGSQFVFMDLNTYEEIRLNA 184

Query: 257 ADVGDRTKWLKEGMDCIVLFWNGKVIDFEVPITIQLTVVDVDPGLKGDTAQGGSKPATLE 316
           ADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP TIQLTVVDVDPGLKGDTAQGGSKPATLE
Sbjct: 185 ADVGDRTKWLKEGMDCIVLFWNGKVIDFEVPNTIQLTVVDVDPGLKGDTAQGGSKPATLE 244

Query: 317 TGAVVNVPLFINVGDSIVIDTRTGQYTSRA 346
           TGAVVNVPLF+NVGDSIV+DTRTGQYTSRA
Sbjct: 245 TGAVVNVPLFVNVGDSIVVDTRTGQYTSRA 272

[Close]

BLAST of Spg033453 vs. NCBI nr
Match: XP_022971212.1 (uncharacterized protein LOC111470003 [Cucurbita maxima])

HSP 1 Score: 437.6 bits (1124), Expect = 1.0e-118
Identity = 220/238 (92.44%), Postives = 227/238 (95.38%), Query Frame = 0


Query: 108 MADILLCNASLASAFIGRRSSSTTSLSLSLKPSVLRIRRVSFPSSRTGFSRIYALTSNDI 167
           MAD LLCNASL+SAF+ RRSSS TSLSLS KPSVLR RR S  +SRT FSRIYALTSNDI
Sbjct: 1   MADALLCNASLSSAFLARRSSSMTSLSLSSKPSVLRTRRFSSANSRTRFSRIYALTSNDI 60

Query: 168 KVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVTGNTVEKTFRAGSSLDEANVYK 227
           KVGTNIEVDG PWRVLEFLHVKPGKGAAFVRTKIRNYV+GNTVE+TFRAGSSLDEANVYK
Sbjct: 61  KVGTNIEVDGFPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSSLDEANVYK 120

Query: 228 EVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVPI 287
           EVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP 
Sbjct: 121 EVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVPN 180

Query: 288 TIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFINVGDSIVIDTRTGQYTSRA 346
           TIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLF+NVGDSIV+DTRTGQYTSRA
Sbjct: 181 TIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA 238

[Close]

BLAST of Spg033453 vs. NCBI nr
Match: KAG6596305.1 (hypothetical protein SDJN03_09485, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 434.1 bits (1115), Expect = 1.1e-117
Identity = 220/239 (92.05%), Postives = 227/239 (94.98%), Query Frame = 0


Query: 108 MADILLCNASLASAFIGRRSSSTTSLSLSLKPSVLRIRRVSF-PSSRTGFSRIYALTSND 167
           MAD LLCNASL+SAF+ RRSSS  SLSLS KPSVLR RR SF  +SRT F RIYALTSND
Sbjct: 1   MADALLCNASLSSAFLARRSSSMASLSLSSKPSVLRTRRFSFSANSRTRFLRIYALTSND 60

Query: 168 IKVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVTGNTVEKTFRAGSSLDEANVY 227
           IKVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYV+GNTVE+TFRAGSSLDEANVY
Sbjct: 61  IKVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSSLDEANVY 120

Query: 228 KEVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP 287
           KEVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP
Sbjct: 121 KEVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP 180

Query: 288 ITIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFINVGDSIVIDTRTGQYTSRA 346
            TIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLF+NVGDSIV+DTRTGQYTSRA
Sbjct: 181 NTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA 239

[Close]

BLAST of Spg033453 vs. NCBI nr
Match: XP_022157330.1 (uncharacterized protein LOC111024058 [Momordica charantia])

HSP 1 Score: 433.0 bits (1112), Expect = 2.5e-117
Identity = 217/238 (91.18%), Postives = 228/238 (95.80%), Query Frame = 0


Query: 108 MADILLCNASLASAFIGRRSSSTTSLSLSLKPSVLRIRRVSFPSSRTGFSRIYALTSNDI 167
           MADI++C+AS ASAF+GRRSSSTTSLSL  KPS+L IR+VS  SSR GFSRIYAL+SNDI
Sbjct: 1   MADIVVCSASSASAFLGRRSSSTTSLSLPFKPSLLPIRQVSLASSRPGFSRIYALSSNDI 60

Query: 168 KVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVTGNTVEKTFRAGSSLDEANVYK 227
           KVGTN+EVDGAPWRVL  L VKPGKGAAFVRTK+RNYVTGNTVEKTFRAGSSLDEANVYK
Sbjct: 61  KVGTNVEVDGAPWRVLGCLXVKPGKGAAFVRTKMRNYVTGNTVEKTFRAGSSLDEANVYK 120

Query: 228 EVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVPI 287
           EVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVPI
Sbjct: 121 EVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVPI 180

Query: 288 TIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFINVGDSIVIDTRTGQYTSRA 346
           T+QLTVV+VDPGLKGDTAQGGSKPATLETGAVVNVPLFINVGDSIVIDTRTGQYTSRA
Sbjct: 181 TVQLTVVEVDPGLKGDTAQGGSKPATLETGAVVNVPLFINVGDSIVIDTRTGQYTSRA 238

[Close]

BLAST of Spg033453 vs. NCBI nr
Match: XP_008442320.1 (PREDICTED: elongation factor P [Cucumis melo])

HSP 1 Score: 433.0 bits (1112), Expect = 2.5e-117
Identity = 218/238 (91.60%), Postives = 223/238 (93.70%), Query Frame = 0


Query: 108 MADILLCNASLASAFIGRRSSSTTSLSLSLKPSVLRIRRVSFPSSRTGFSRIYALTSNDI 167
           MA  LLCNASL SAF+ R SSS TSLSL LK  V R  R S PSSRTGF RIYALTSNDI
Sbjct: 1   MAGTLLCNASLVSAFLARTSSSKTSLSLPLKSPVFRTSRSSSPSSRTGFFRIYALTSNDI 60

Query: 168 KVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVTGNTVEKTFRAGSSLDEANVYK 227
           KVGTN+EVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVTGNTVEKTFRAGSSL+EANVYK
Sbjct: 61  KVGTNLEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVTGNTVEKTFRAGSSLEEANVYK 120

Query: 228 EVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVPI 287
           EVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDC+VLFWNGKVIDFEVPI
Sbjct: 121 EVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCVVLFWNGKVIDFEVPI 180

Query: 288 TIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFINVGDSIVIDTRTGQYTSRA 346
           TIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFINVGDSI+IDTRTGQYTSRA
Sbjct: 181 TIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFINVGDSIMIDTRTGQYTSRA 238

[Close]

BLAST of Spg033453 vs. ExPASy Swiss-Prot
Match: Q54760 (Elongation factor P OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=efp PE=3 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 4.8e-63
Identity = 113/183 (61.75%), Postives = 143/183 (78.14%), Query Frame = 0


Query: 162 LTSNDIKVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVTGNTVEKTFRAGSSLD 221
           ++SND + GT IE+DGA WRV+EFLHVKPGKG+AFVRTK++N  TGN VEKTFRAG ++ 
Sbjct: 2   ISSNDFRTGTTIEIDGAVWRVVEFLHVKPGKGSAFVRTKLKNAKTGNVVEKTFRAGETVP 61

Query: 222 EANVYKEVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVI 281
           +A + K   Q+TYKDG  FVFMD+ TYEE RL AA +GDR K+LKEGM+  V+ WNG+VI
Sbjct: 62  QAVLEKSTLQYTYKDGDDFVFMDMETYEEGRLTAATIGDRVKYLKEGMEANVITWNGQVI 121

Query: 282 DFEVPITIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFINVGDSIVIDTRTGQY 341
           + E+P ++ L V++ DPG+KGDTA GG+KPA +ETGA V VPLFI+VG+ I IDTR   Y
Sbjct: 122 EVELPNSVVLEVIETDPGVKGDTATGGTKPAKVETGAQVMVPLFISVGERIKIDTRNDSY 181

Query: 342 TSR 345
             R
Sbjct: 182 LGR 184

[Close]

BLAST of Spg033453 vs. ExPASy Swiss-Prot
Match: Q5N1T5 (Elongation factor P OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=efp PE=3 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 4.8e-63
Identity = 113/183 (61.75%), Postives = 143/183 (78.14%), Query Frame = 0


Query: 162 LTSNDIKVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVTGNTVEKTFRAGSSLD 221
           ++SND + GT IE+DGA WRV+EFLHVKPGKG+AFVRTK++N  TGN VEKTFRAG ++ 
Sbjct: 2   ISSNDFRTGTTIEIDGAVWRVVEFLHVKPGKGSAFVRTKLKNAKTGNVVEKTFRAGETVP 61

Query: 222 EANVYKEVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVI 281
           +A + K   Q+TYKDG  FVFMD+ TYEE RL AA +GDR K+LKEGM+  V+ WNG+VI
Sbjct: 62  QAVLEKSTLQYTYKDGDDFVFMDMETYEEGRLTAATIGDRVKYLKEGMEANVITWNGQVI 121

Query: 282 DFEVPITIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFINVGDSIVIDTRTGQY 341
           + E+P ++ L V++ DPG+KGDTA GG+KPA +ETGA V VPLFI+VG+ I IDTR   Y
Sbjct: 122 EVELPNSVVLEVIETDPGVKGDTATGGTKPAKVETGAQVMVPLFISVGERIKIDTRNDSY 181

Query: 342 TSR 345
             R
Sbjct: 182 LGR 184

[Close]

BLAST of Spg033453 vs. ExPASy Swiss-Prot
Match: B1XKV1 (Elongation factor P OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) OX=32049 GN=efp PE=3 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 5.3e-62
Identity = 111/183 (60.66%), Postives = 142/183 (77.60%), Query Frame = 0


Query: 162 LTSNDIKVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVTGNTVEKTFRAGSSLD 221
           ++SND + GT+IE+DG+ WRV+EFLHVKPGKG+AFVRTK++N  TG+ VEKTFRAG ++ 
Sbjct: 2   ISSNDFRTGTSIELDGSVWRVVEFLHVKPGKGSAFVRTKLKNAQTGSVVEKTFRAGETVP 61

Query: 222 EANVYKEVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVI 281
           +A + K   Q TYK+G QFVFMD+ TYEE+RL  A +GDR K+L E M+  VLFWN +VI
Sbjct: 62  QAILDKRTMQHTYKEGEQFVFMDMETYEEVRLTEAQIGDRVKYLMEEMEVNVLFWNSQVI 121

Query: 282 DFEVPITIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFINVGDSIVIDTRTGQY 341
           D E+P T+ L V + DPG+KGDTA GG+KPA + TGA VNVPLFI++G+ I IDTRT  Y
Sbjct: 122 DVELPNTVVLEVTETDPGVKGDTATGGTKPAIVSTGAQVNVPLFISIGERIKIDTRTDTY 181

Query: 342 TSR 345
             R
Sbjct: 182 LGR 184

[Close]

BLAST of Spg033453 vs. ExPASy Swiss-Prot
Match: B0JHV3 (Elongation factor P OS=Microcystis aeruginosa (strain NIES-843) OX=449447 GN=efp PE=3 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 9.1e-62
Identity = 107/183 (58.47%), Postives = 139/183 (75.96%), Query Frame = 0


Query: 162 LTSNDIKVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVTGNTVEKTFRAGSSLD 221
           ++SND + GT IE+DG+ WRV+EFLHVKPGKG+AFVRTK++N  TGN VE+TFRAG +L 
Sbjct: 2   ISSNDFRSGTTIEIDGSVWRVVEFLHVKPGKGSAFVRTKLKNVQTGNVVERTFRAGETLP 61

Query: 222 EANVYKEVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVI 281
            A + K   Q TYK+G QFVFMD+ T+EE  L    +GDR K+LKEGM+  +LFWN +V+
Sbjct: 62  SATIEKRTMQHTYKEGDQFVFMDMETFEEATLTPVQMGDRAKYLKEGMEVNILFWNDQVL 121

Query: 282 DFEVPITIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFINVGDSIVIDTRTGQY 341
           D E+P ++ L + D DPG+KGDTA GG+KPA +ETGA V VPLFI++G+ I +DTR G Y
Sbjct: 122 DIELPTSVILEITDTDPGVKGDTATGGTKPAIVETGAQVMVPLFISIGERIKVDTRDGSY 181

Query: 342 TSR 345
             R
Sbjct: 182 LGR 184

[Close]

BLAST of Spg033453 vs. ExPASy Swiss-Prot
Match: Q2JP65 (Elongation factor P OS=Synechococcus sp. (strain JA-2-3B'a(2-13)) OX=321332 GN=efp PE=3 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 7.2e-59
Identity = 105/183 (57.38%), Postives = 137/183 (74.86%), Query Frame = 0


Query: 162 LTSNDIKVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVTGNTVEKTFRAGSSLD 221
           ++SND++ G ++E+DGAP++V+EFLHVKPGKGAAFVRTK++N  TGN VEKTFRAG +L 
Sbjct: 2   ISSNDLRPGVSVEIDGAPYKVIEFLHVKPGKGAAFVRTKLKNMQTGNVVEKTFRAGETLP 61

Query: 222 EANVYKEVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVI 281
            A + K   Q+ Y +G+  VFMD+ TYE+  + AA +G   K+LKE M   +L WNG+VI
Sbjct: 62  AATIEKVEMQYLYAEGNNLVFMDMETYEQAPITAAQIGSAVKYLKENMQVSILRWNGQVI 121

Query: 282 DFEVPITIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFINVGDSIVIDTRTGQY 341
           D E+P T+ L VV+ DPG+KGDTA GG+KPA LETGA + VPLFI VG+ I +DTRT  Y
Sbjct: 122 DVELPNTVVLEVVETDPGVKGDTATGGTKPAKLETGAEIQVPLFIKVGERIRVDTRTDTY 181

Query: 342 TSR 345
             R
Sbjct: 182 LGR 184

[Close]

BLAST of Spg033453 vs. ExPASy TrEMBL
Match: A0A6J1I1D0 (uncharacterized protein LOC111470003 OS=Cucurbita maxima OX=3661 GN=LOC111470003 PE=3 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 4.9e-119
Identity = 220/238 (92.44%), Postives = 227/238 (95.38%), Query Frame = 0


Query: 108 MADILLCNASLASAFIGRRSSSTTSLSLSLKPSVLRIRRVSFPSSRTGFSRIYALTSNDI 167
           MAD LLCNASL+SAF+ RRSSS TSLSLS KPSVLR RR S  +SRT FSRIYALTSNDI
Sbjct: 1   MADALLCNASLSSAFLARRSSSMTSLSLSSKPSVLRTRRFSSANSRTRFSRIYALTSNDI 60

Query: 168 KVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVTGNTVEKTFRAGSSLDEANVYK 227
           KVGTNIEVDG PWRVLEFLHVKPGKGAAFVRTKIRNYV+GNTVE+TFRAGSSLDEANVYK
Sbjct: 61  KVGTNIEVDGFPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSSLDEANVYK 120

Query: 228 EVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVPI 287
           EVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP 
Sbjct: 121 EVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVPN 180

Query: 288 TIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFINVGDSIVIDTRTGQYTSRA 346
           TIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLF+NVGDSIV+DTRTGQYTSRA
Sbjct: 181 TIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA 238

[Close]

BLAST of Spg033453 vs. ExPASy TrEMBL
Match: A0A6J1DSR9 (uncharacterized protein LOC111024058 OS=Momordica charantia OX=3673 GN=LOC111024058 PE=3 SV=1)

HSP 1 Score: 433.0 bits (1112), Expect = 1.2e-117
Identity = 217/238 (91.18%), Postives = 228/238 (95.80%), Query Frame = 0


Query: 108 MADILLCNASLASAFIGRRSSSTTSLSLSLKPSVLRIRRVSFPSSRTGFSRIYALTSNDI 167
           MADI++C+AS ASAF+GRRSSSTTSLSL  KPS+L IR+VS  SSR GFSRIYAL+SNDI
Sbjct: 1   MADIVVCSASSASAFLGRRSSSTTSLSLPFKPSLLPIRQVSLASSRPGFSRIYALSSNDI 60

Query: 168 KVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVTGNTVEKTFRAGSSLDEANVYK 227
           KVGTN+EVDGAPWRVL  L VKPGKGAAFVRTK+RNYVTGNTVEKTFRAGSSLDEANVYK
Sbjct: 61  KVGTNVEVDGAPWRVLGCLXVKPGKGAAFVRTKMRNYVTGNTVEKTFRAGSSLDEANVYK 120

Query: 228 EVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVPI 287
           EVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVPI
Sbjct: 121 EVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVPI 180

Query: 288 TIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFINVGDSIVIDTRTGQYTSRA 346
           T+QLTVV+VDPGLKGDTAQGGSKPATLETGAVVNVPLFINVGDSIVIDTRTGQYTSRA
Sbjct: 181 TVQLTVVEVDPGLKGDTAQGGSKPATLETGAVVNVPLFINVGDSIVIDTRTGQYTSRA 238

[Close]

BLAST of Spg033453 vs. ExPASy TrEMBL
Match: A0A1S3B5F0 (elongation factor P OS=Cucumis melo OX=3656 GN=LOC103486227 PE=3 SV=1)

HSP 1 Score: 433.0 bits (1112), Expect = 1.2e-117
Identity = 218/238 (91.60%), Postives = 223/238 (93.70%), Query Frame = 0


Query: 108 MADILLCNASLASAFIGRRSSSTTSLSLSLKPSVLRIRRVSFPSSRTGFSRIYALTSNDI 167
           MA  LLCNASL SAF+ R SSS TSLSL LK  V R  R S PSSRTGF RIYALTSNDI
Sbjct: 1   MAGTLLCNASLVSAFLARTSSSKTSLSLPLKSPVFRTSRSSSPSSRTGFFRIYALTSNDI 60

Query: 168 KVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVTGNTVEKTFRAGSSLDEANVYK 227
           KVGTN+EVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVTGNTVEKTFRAGSSL+EANVYK
Sbjct: 61  KVGTNLEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVTGNTVEKTFRAGSSLEEANVYK 120

Query: 228 EVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVPI 287
           EVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDC+VLFWNGKVIDFEVPI
Sbjct: 121 EVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCVVLFWNGKVIDFEVPI 180

Query: 288 TIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFINVGDSIVIDTRTGQYTSRA 346
           TIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFINVGDSI+IDTRTGQYTSRA
Sbjct: 181 TIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFINVGDSIMIDTRTGQYTSRA 238

[Close]

BLAST of Spg033453 vs. ExPASy TrEMBL
Match: A0A6J1FIJ6 (uncharacterized protein LOC111444251 OS=Cucurbita moschata OX=3662 GN=LOC111444251 PE=3 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 2.7e-117
Identity = 219/239 (91.63%), Postives = 226/239 (94.56%), Query Frame = 0


Query: 108 MADILLCNASLASAFIGRRSSSTTSLSLSLKPSVLRIRRV-SFPSSRTGFSRIYALTSND 167
           MAD LLCNAS +SAF+ RRSSST SLSLS KPSVLR RR  S  +SRT F RIYALTSND
Sbjct: 1   MADALLCNASFSSAFLARRSSSTASLSLSSKPSVLRTRRFSSSANSRTRFLRIYALTSND 60

Query: 168 IKVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVTGNTVEKTFRAGSSLDEANVY 227
           IKVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYV+GNTVE+TFRAGSSLDEANVY
Sbjct: 61  IKVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSSLDEANVY 120

Query: 228 KEVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP 287
           KEVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP
Sbjct: 121 KEVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP 180

Query: 288 ITIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFINVGDSIVIDTRTGQYTSRA 346
            TIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLF+NVGDSIV+DTRTGQYTSRA
Sbjct: 181 NTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA 239

[Close]

BLAST of Spg033453 vs. ExPASy TrEMBL
Match: A0A0A0LD89 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G728090 PE=3 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 5.1e-116
Identity = 221/239 (92.47%), Postives = 224/239 (93.72%), Query Frame = 0


Query: 108 MADILLCNASLASAFIGRRSSSTTSLSLSLKPSVLRIRRVSF-PSSRTGFSRIYALTSND 167
           MA  LLCNAS ASAF+ R SSS TSLSL LKP  LR    SF PSSRTGF RIYALTSND
Sbjct: 1   MAGTLLCNASSASAFLARTSSSKTSLSLPLKPLALR----SFSPSSRTGFFRIYALTSND 60

Query: 168 IKVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVTGNTVEKTFRAGSSLDEANVY 227
           IKVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVTGNTVEKTFRAGSSL+EANVY
Sbjct: 61  IKVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVTGNTVEKTFRAGSSLEEANVY 120

Query: 228 KEVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP 287
           KEVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP
Sbjct: 121 KEVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP 180

Query: 288 ITIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFINVGDSIVIDTRTGQYTSRA 346
           ITIQLTVVDVDPGLKGDTAQGGSKPATLETGAVV+VPLFINVGDSIVIDTRTGQYTSRA
Sbjct: 181 ITIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVSVPLFINVGDSIVIDTRTGQYTSRA 235

[Close]

BLAST of Spg033453 vs. TAIR 10
Match: AT3G08740.1 (elongation factor P (EF-P) family protein )

HSP 1 Score: 318.5 bits (815), Expect = 6.4e-87
Identity = 156/225 (69.33%), Postives = 187/225 (83.11%), Query Frame = 0


Query: 128 SSTTSLSLSLK-PSVLRIRRVSFPSSRTG-----FSRIY-ALTSNDIKVGTNIEVDGAPW 187
           SST SL +     S   + R++ P+ R       F RI+ ++++NDIK GTNIEVDGAPW
Sbjct: 12  SSTPSLCIPYSTASFSSMNRLALPAVRISPRTNRFPRIHCSMSANDIKAGTNIEVDGAPW 71

Query: 188 RVLEFLHVKPGKGAAFVRTKIRNYVTGNTVEKTFRAGSSLDEANVYKEVKQFTYKDGSQF 247
           RVLEFLHVKPGKGAAFVRTKIRNYV G+TVE+TFRAG S++EAN+YKE KQFTYKDGSQF
Sbjct: 72  RVLEFLHVKPGKGAAFVRTKIRNYVNGSTVERTFRAGISVEEANIYKETKQFTYKDGSQF 131

Query: 248 VFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVPITIQLTVVDVDPGL 307
           VFMDL TYEE RLN +D+G++TKWLKEGMDCI+L+W  KVIDF++PIT++L VVDVDPGL
Sbjct: 132 VFMDLTTYEETRLNESDMGEKTKWLKEGMDCILLYWKDKVIDFDLPITVKLKVVDVDPGL 191

Query: 308 KGDTAQGGSKPATLETGAVVNVPLFINVGDSIVIDTRTGQYTSRA 346
           +GDT QGGSKPAT+ETGA+V VPLFINVG+ I +DTRTG Y +RA
Sbjct: 192 RGDTVQGGSKPATMETGAIVAVPLFINVGEEIFVDTRTGAYMNRA 236

[Close]

BLAST of Spg033453 vs. TAIR 10
Match: AT4G26310.1 (elongation factor P (EF-P) family protein )

HSP 1 Score: 95.1 bits (235), Expect = 1.2e-19
Identity = 53/180 (29.44%), Postives = 95/180 (52.78%), Query Frame = 0


Query: 167 IKVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVTGNTVEKTFRAGSSLDEANVY 226
           ++ G  IE  G  +RV+E  H + G+G A ++ ++R+  TGN +   F +  S+++  V+
Sbjct: 78  LRAGNVIERTGRTFRVVEAEHKQQGRGGASIQVELRDVDTGNKLNLRFGSEESVEK--VF 137

Query: 227 KEVKQFT--YKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFE 286
            E K FT  Y +G     ++ NT+E++ +     G    +LKE M   +  ++G+ +   
Sbjct: 138 VEEKSFTCLYAEGDTAYLIEPNTFEQVEVPLDIFGKAAVYLKEEMKVQLQLYDGRALSAS 197

Query: 287 VPITIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFINVGDSIVIDTRTGQYTSR 345
           +P  I  TVV+    +KG T+    K A L+ G+ + VP ++  G+ IVI+T    +  R
Sbjct: 198 IPKHITCTVVETQLPMKGLTSAPRYKRALLDNGSTIQVPSYLEAGEKIVINTEDDSFVKR 255

[Close]

BLAST of Spg033453 vs. TAIR 10
Match: AT4G26310.2 (elongation factor P (EF-P) family protein )

HSP 1 Score: 77.0 bits (188), Expect = 3.2e-14
Identity = 45/156 (28.85%), Postives = 82/156 (52.56%), Query Frame = 0


Query: 167 IKVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVTGNTVEKTFRAGSSLDEANVY 226
           ++ G  IE  G  +RV+E  H + G+G A ++ ++R+  TGN +   F +  S+++  V+
Sbjct: 78  LRAGNVIERTGRTFRVVEAEHKQQGRGGASIQVELRDVDTGNKLNLRFGSEESVEK--VF 137

Query: 227 KEVKQFT--YKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFE 286
            E K FT  Y +G     ++ NT+E++ +     G    +LKE M   +  ++G+ +   
Sbjct: 138 VEEKSFTCLYAEGDTAYLIEPNTFEQVEVPLDIFGKAAVYLKEEMKVQLQLYDGRALSAS 197

Query: 287 VPITIQLTVVDVDPGLKGDTAQGGSKPATLETGAVV 321
           +P  I  TVV+    +KG T+    K A L+ G+ +
Sbjct: 198 IPKHITCTVVETQLPMKGLTSAPRYKRALLDNGSTI 231

The following BLAST results are available for this feature:

BLAST of Spg033453 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7027859.1	2.7e-127	89.26	efp, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022971212.1	1.0e-118	92.44	uncharacterized protein LOC111470003 [Cucurbita maxima]	[more]
KAG6596305.1	1.1e-117	92.05	hypothetical protein SDJN03_09485, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022157330.1	2.5e-117	91.18	uncharacterized protein LOC111024058 [Momordica charantia]	[more]
XP_008442320.1	2.5e-117	91.60	PREDICTED: elongation factor P [Cucumis melo]	[more]

BLAST of Spg033453 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54760	4.8e-63	61.75	Elongation factor P OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=...	[more]
Q5N1T5	4.8e-63	61.75	Elongation factor P OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 14...	[more]
B1XKV1	5.3e-62	60.66	Elongation factor P OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) O...	[more]
B0JHV3	9.1e-62	58.47	Elongation factor P OS=Microcystis aeruginosa (strain NIES-843) OX=449447 GN=efp...	[more]
Q2JP65	7.2e-59	57.38	Elongation factor P OS=Synechococcus sp. (strain JA-2-3B'a(2-13)) OX=321332 GN=e...	[more]

BLAST of Spg033453 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I1D0	4.9e-119	92.44	uncharacterized protein LOC111470003 OS=Cucurbita maxima OX=3661 GN=LOC111470003...	[more]
A0A6J1DSR9	1.2e-117	91.18	uncharacterized protein LOC111024058 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A1S3B5F0	1.2e-117	91.60	elongation factor P OS=Cucumis melo OX=3656 GN=LOC103486227 PE=3 SV=1	[more]
A0A6J1FIJ6	2.7e-117	91.63	uncharacterized protein LOC111444251 OS=Cucurbita moschata OX=3662 GN=LOC1114442...	[more]
A0A0A0LD89	5.1e-116	92.47	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G728090 PE=3 SV=1	[more]

BLAST of Spg033453 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G08740.1	6.4e-87	69.33	elongation factor P (EF-P) family protein	[more]
AT4G26310.1	1.2e-19	29.44	elongation factor P (EF-P) family protein	[more]
AT4G26310.2	3.2e-14	28.85	elongation factor P (EF-P) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015365	Elongation factor P, C-terminal	SMART	SM00841	Elong_fact_P_C_2	coord: 289..344 e-value: 7.1E-32 score: 121.9
IPR015365	Elongation factor P, C-terminal	PFAM	PF09285	Elong-fact-P_C	coord: 289..344 e-value: 1.6E-27 score: 95.0
IPR015365	Elongation factor P, C-terminal	CDD	cd05794	S1_EF-P_repeat_2	coord: 289..344 e-value: 6.526E-27 score: 98.7502
IPR001059	Translation elongation factor P/YeiP, central	SMART	SM01185	EFP_2	coord: 227..281 e-value: 3.1E-23 score: 93.2
IPR001059	Translation elongation factor P/YeiP, central	PFAM	PF01132	EFP	coord: 231..281 e-value: 2.3E-21 score: 75.5
IPR001059	Translation elongation factor P/YeiP, central	CDD	cd04470	S1_EF-P_repeat_1	coord: 231..286 e-value: 1.46478E-25 score: 95.6027
IPR011768	Translation elongation factor P	TIGRFAM	TIGR00038	TIGR00038	coord: 163..345 e-value: 2.1E-72 score: 240.6
IPR011768	Translation elongation factor P	HAMAP	MF_00141	EF_P	coord: 161..345 score: 46.446529
None	No IPR available	GENE3D	2.40.50.140		coord: 288..345 e-value: 3.8E-26 score: 92.5
None	No IPR available	GENE3D	2.40.50.140		coord: 225..286 e-value: 5.2E-21 score: 76.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR30053:SF12	ELONGATION FACTOR P (EF-P) FAMILY PROTEIN	coord: 124..345
IPR014722	Ribosomal protein L2, domain 2	GENE3D	2.30.30.30		coord: 154..223 e-value: 4.8E-27 score: 95.3
IPR013185	Translation elongation factor, KOW-like	PFAM	PF08207	EFP_N	coord: 164..219 e-value: 5.7E-25 score: 87.1
IPR020599	Translation elongation factor P/YeiP	PANTHER	PTHR30053	ELONGATION FACTOR P	coord: 124..345
IPR013852	Translation elongation factor P/YeiP, conserved site	PROSITE	PS01275	EFP	coord: 310..329
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 226..289
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 288..345
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 163..223

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg033453.1	Spg033453.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006414	translational elongation
biological_process	GO:0043043	peptide biosynthetic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003746	translation elongation factor activity