Spg033416 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAGCATCGACTTCAACTCCTCCGATGAGAAACCCAGTCACTAGAAACCCTAAGATTTCAATCCCTCAGCAAAATCCATGCATTGTTCCACCAAATCAAGCCATCATCAACCAAACAGAAGCGCAAATCTTCCTTTACTATAATCCTCAACCCAGGTTTCAATGCCGACGAAATCAATAGACCAATCTTCTTTTTCCTCAAGATTAGAACAATGCTTTAACCAGTTTCCTCCTTAACTCAACCTCTTGCCATTGAACTTGCTGATACAAACTACCTTTCATGGAAGAATCAAGTGCTTGGTGTTATTATCTCACATGGGCTTTTGACATTTGGGAAACTTTGCGTAAAGTTTATGAATCATGATCCATCGTATAATGGGATCGCGTTCTCAACTTCGACAAGTGGAGAAAGACGGCCCCAATGTCAGCCAAGGTAGCATTATGGGGCACAGTTGGAGAAACAAACGGCTGTGGATCAACTGAATATGATTCAGGCGAATTTTGCTCACCTTGATTCTGAGCCGAATAACAAGCGATTCGGGAAAAAACTCAGCTCCGAAATCAACTCAGTTCCAGGGCCAAGGTTCTGTTGCTCCATCCTCTGCTTTACAACAATTGCTTTAATGGTTTAAGTTAGAAAATTTGTTGATCTAAGTATAGTAATAGTGAACTTGAAGTGTTTGAAGACGGTTTTTATTGATTGGATATAGGAATGTAGTAAAGCCAATTTTGGAGTTTTGACGTTAATTGAACGGACTATGTTGGAATCTCTTGAATCTTTAGGTATGACGATAGCTTGGAATGAAAAGAAATGGTAGCCATGGTTACAAGATCACGAATCATGTAATGTAATTGTTGAATAAAAGAAAGAATTGGAAGTAATAGAATTTTCCGGACATGAGTGTAATTTAGGACTCTTGGAGTCATGAATTTCAAGAGCTTTGAAGACAAGGGAAGATTGAATAAAGAAAAAATTGAACATAGAAACATCGAATAAGAGTAGAGAGACGTGAAGAAGAAGATGATGTCTAGCTCAATGGTTTAAGTTAGAATTCGTAGATACAAGTGTACGAGAAGTCAGCTTGAAGTTTGAAAGAACTTATAGTTTGAGGAATAACGAAAAGAATGGGTTTGTTAGTATTTGATAGCGAAGGACGTTAACATATTATTTTAATCATTGGTTAATTATAATAAGTTGATACAAGTGGATAAACTAAGTTTAGAATTTTGATTGTTCGAGTTTGAGAAATGCAATAGGTTCTGTAATTTAGAGCAAGAAAGAAAGAGGCTCTTGTTGGAGGAAGTGTGAGTTGGTGTAGCACTGTTTGGGATTTTGAGTAACATGGAATGAATTTGATTGTATCTTGGAGTCATGGGCTATAAAAGAAATGGTGGTTCTCCTCCTGGTATAAGTTATTGATTCTTTGTTTTTTTTTTTTAAAGGAAACAATTGTCTATGCAATTTCCTAACTTGAGGCTATGCAATCCTTTAAGTGCTGAGAGTCTGAAAATTGTTGACTTTGTAATTGGCACAGACATTTTGAAGCAAGCTTATTAGTGAAATTGTTTTGTTGAAGATTTGCAAGAGGGTGCTTGCTCTTGGAAGGATGAGGGTTGAACAATCTTGGTCCTGCTTGTGCTTTAAGTAATTCTGTATTTTTAACTAGTCTTGATACCAAACGCCTTGTTTATGACCGTTCTACAAAAGATGAAAATAGTTTTAAAACTGGTTTAATGCAGAAAACAACTCTCGCTAACCTATATTATATGACTTATGGGAGAAGTTCAAATCCTTTTCACAGTTGGAGGCAGAAGGAGAAGTCCAGGAGTTGGAGTCATATGTCAAAACTCAAATGCTTTATGTTTTTGGTGGTGGTAGTGGTTATGCATGGTATAACACAGGTCTGGGATTTTACTGATTTTCTAGGATGTCTGAGGTAGTGTAACCAAATAGCTTCTCACATTTCCATTCTTTTGTTGTTGAAGTTGAATTATATAACCTGGAGAATGATCAACGGACCTTGTGCCCTTTAAATGTGGAGAAGGGGAGCCTGGGGCTGGGAGGAGGAGTTACTGTTGGAAACAAATTATTTGCTGTTGGTAGGAAATGGCACTGAAGCAGGTGAGTTTTGCTGGAATGCAAAGTGTGACTTCGTAGGAAACCAACTAGTAATGTTGCCAACCTGAACGTAGCTCACTTATTAAGGCATTGTACCTTTGATCGTTAGATGTTTGAATCTCCATTCCCATATGTTGAATGGAAAAAAGAAACCATGAATAATGTTTCTTTGCCTTGCTAATGCTAATGTTGTTGTAGGTTCTAATAGGTTAGAAGAGATGATGTAGGGAGGAGCTGTTACTGCCACTGGGATTCTTCAAAGAGGTCATTTTTTAATTGAACAGGGAAGATTGAATTCTATAATTAGCAGATTAATGTGAATATTTAAGATTCAAAAGAAACCAAAAATTATTTTTAAATTTTTTTTTTTTTAATGTTAC ATGGGAGCATCGACTTCAACTCCTCCGATGAGAAACCCAGTCACTAGAAACCCTAAGATTTCAATCCCTCAGCAAAATCCATGCATTGTTCCACCAAATCAAGCCATCATCAACCAAACAGAAGCGCAAATCTTCCTTTACTATAATCCTCAACCCAGGCGAATTTTGCTCACCTTGATTCTGAGCCGAATAACAAGCGATTCGGGAAAAAACTCAGCTCCGAAATCAACTCAGTTCCAGGGCCAAGTAACATGGAATGAATTTGATTGTATCTTGGAGTCATGGGCTATAAAAGAAATGGTGGTTCTCCTCCTGTTGGAGGCAGAAGGAGAAGTCCAGGAGTTGGAGTCATATGTCAAAACTCAAATGCTTTATGTTTTTGGTGGTGGTAGTGGTTATGCATGGTATAACACAGTTGAATTATATAACCTGGAGAATGATCAACGGACCTTGTGCCCTTTAAATGTGGAGAAGGGGAGCCTGGGGCTGGGAGGAGGAGTTACTGTTGGAAACAAATTATTTGCTGTTGGTTCTAATAGGTTAGAAGAGATGATGTAG ATGGGAGCATCGACTTCAACTCCTCCGATGAGAAACCCAGTCACTAGAAACCCTAAGATTTCAATCCCTCAGCAAAATCCATGCATTGTTCCACCAAATCAAGCCATCATCAACCAAACAGAAGCGCAAATCTTCCTTTACTATAATCCTCAACCCAGGCGAATTTTGCTCACCTTGATTCTGAGCCGAATAACAAGCGATTCGGGAAAAAACTCAGCTCCGAAATCAACTCAGTTCCAGGGCCAAGTAACATGGAATGAATTTGATTGTATCTTGGAGTCATGGGCTATAAAAGAAATGGTGGTTCTCCTCCTGTTGGAGGCAGAAGGAGAAGTCCAGGAGTTGGAGTCATATGTCAAAACTCAAATGCTTTATGTTTTTGGTGGTGGTAGTGGTTATGCATGGTATAACACAGTTGAATTATATAACCTGGAGAATGATCAACGGACCTTGTGCCCTTTAAATGTGGAGAAGGGGAGCCTGGGGCTGGGAGGAGGAGTTACTGTTGGAAACAAATTATTTGCTGTTGGTTCTAATAGGTTAGAAGAGATGATGTAG MGASTSTPPMRNPVTRNPKISIPQQNPCIVPPNQAIINQTEAQIFLYYNPQPRRILLTLILSRITSDSGKNSAPKSTQFQGQVTWNEFDCILESWAIKEMVVLLLLEAEGEVQELESYVKTQMLYVFGGGSGYAWYNTVELYNLENDQRTLCPLNVEKGSLGLGGGVTVGNKLFAVGSNRLEEMM Homology
BLAST of Spg033416 vs. NCBI nr
Match: XP_022982773.1 (influenza virus NS1A-binding protein homolog [Cucurbita maxima] >XP_022982774.1 influenza virus NS1A-binding protein homolog [Cucurbita maxima]) HSP 1 Score: 82.4 bits (202), Expect = 4.4e-12 Identity = 41/55 (74.55%), Postives = 46/55 (83.64%), Query Frame = 0
BLAST of Spg033416 vs. NCBI nr
Match: KAG6580447.1 (Kelch-like protein 8, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 82.4 bits (202), Expect = 4.4e-12 Identity = 41/55 (74.55%), Postives = 46/55 (83.64%), Query Frame = 0
BLAST of Spg033416 vs. NCBI nr
Match: KAG7017201.1 (Kelch-like protein 8 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 82.4 bits (202), Expect = 4.4e-12 Identity = 41/55 (74.55%), Postives = 46/55 (83.64%), Query Frame = 0
BLAST of Spg033416 vs. NCBI nr
Match: XP_022934311.1 (influenza virus NS1A-binding protein homolog [Cucurbita moschata] >XP_022934312.1 influenza virus NS1A-binding protein homolog [Cucurbita moschata] >XP_022934314.1 influenza virus NS1A-binding protein homolog [Cucurbita moschata]) HSP 1 Score: 82.4 bits (202), Expect = 4.4e-12 Identity = 41/55 (74.55%), Postives = 46/55 (83.64%), Query Frame = 0
BLAST of Spg033416 vs. NCBI nr
Match: XP_023527355.1 (influenza virus NS1A-binding protein homolog [Cucurbita pepo subsp. pepo] >XP_023527356.1 influenza virus NS1A-binding protein homolog [Cucurbita pepo subsp. pepo]) HSP 1 Score: 82.4 bits (202), Expect = 4.4e-12 Identity = 41/55 (74.55%), Postives = 46/55 (83.64%), Query Frame = 0
BLAST of Spg033416 vs. ExPASy TrEMBL
Match: A0A6J1J5H4 (influenza virus NS1A-binding protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111481533 PE=4 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 2.2e-12 Identity = 41/55 (74.55%), Postives = 46/55 (83.64%), Query Frame = 0
BLAST of Spg033416 vs. ExPASy TrEMBL
Match: A0A6J1F1G5 (influenza virus NS1A-binding protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111441514 PE=4 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 2.2e-12 Identity = 41/55 (74.55%), Postives = 46/55 (83.64%), Query Frame = 0
BLAST of Spg033416 vs. ExPASy TrEMBL
Match: A0A6J1DU24 (influenza virus NS1A-binding protein homolog OS=Momordica charantia OX=3673 GN=LOC111024010 PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 4.1e-11 Identity = 42/56 (75.00%), Postives = 46/56 (82.14%), Query Frame = 0
BLAST of Spg033416 vs. ExPASy TrEMBL
Match: A0A5D3DNS2 (Kelch-like protein 2 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00450 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 2.0e-10 Identity = 40/63 (63.49%), Postives = 47/63 (74.60%), Query Frame = 0
BLAST of Spg033416 vs. ExPASy TrEMBL
Match: A0A5A7TLJ1 (Kelch-like protein 2 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G005610 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 2.0e-10 Identity = 40/63 (63.49%), Postives = 47/63 (74.60%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|