Spg033224 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATTGGCTGCATATTTTCGTTAGTAAATTTTCGTTTTCTCCCAAAAACATTTCCCGTTCTTCTCTCGTGGACTCGATTTTCTGGTTCTCGAGAGCTTTGCGTCGTCGATTCCGATGGATCGAACTCAGATAGTTCTGTTAGGGCTGCCGATCTTTCTGCTTTTTACTGATATTGTGAATCTTTTCACTCCTCCGCCTCCGAAACCTGCCAATCATCCTCCACCTCGAGTTCAGTACCAGCCTAAATCTCAATCAGTCATCCAGGAACCGCTTGAATTTCCTACGGAGGTGAATGATTTCGTGTTTGATTGGATTAATCTTGATTTTTGTTCGTGTTTTGTGATGTTCAGCAACTTAATTTGTTGTCTCGGTTTTGGAATGCAGAAACGGACTGGAATCGGAGGAATTGGCCAGGGCAGCGTTATTAATATCAATTTCTGTGTTTCTTGTTCTTACAGGTAGTTCATCCTTTTGGTTATCAACTTTTGTGTTTATCTGTTTCGTTTTGGGCGGAAAGTGAGTGAATCAAACGTTTATGTGATTTTCCTTTCCAATGTGTATCTTTCTTCTCCGGTTTTCGTCCATTCTGATCACGCTTGAAATTGCGGTAAGCTTACAGTGAAGTAAAACTTGATTTCTTTTTTTCAGCACAGGTTTCTTTATTGTTGTTAACTTCCTTGATTGAACGAACATTTCAATTTCTCTCTCTTTAGTGGTTGTTGATAGTCACTATGATGAATAACTGGTTGTACTCTGGAATCTTCGTTGCTGATCTTCCTTTAAACTCGAGTTCTTTGTTTTTTGTTGTTTTTCTTTTCCACAGTGCAGGTCTCTTTTATTATCTTTGACTTTAACTTCCTTCCTCGATTGAACAAACGTTTCGATTTCTCTACTCTCTGGTGGTTGTTGAAAGTAATTATGATGAACAATTGGTTGTACTTTGGAATCTTCCGTTTTGTTGTTCCTTTAAACTCGATTTCTTTGTTTTTAATTTTCTTCTTTAAGCAGAGGTTTCTTTTATTACCTTTAACTTCCTCGAGTGAACAAACATTTCGATTTCTCTACTATCTAGTGGTTGCGGAGAGTCATTATGATGAAAAATTAGTTGTACTTAGGAATCTGAATTTGTTGTTCCTTGGAAGTTGATTTCATTTTTCTTTGATTAGGACAGGTTTCTTTTATCAGTAACATCCTCGATTGAACTAATATTTCAATTTCTCCACTCTCTCGTGATTGTTGAGAGTCGTCATTATGATAAACTCTGCTTCACTGTCGTTGTTCCGTTGAACATGATTTCTTAGTGGTTTTTTTAAATTTTATTTTTAATTTTTAACGTCTAATTTTATTTTTAACTCAAGTTTCTTTTATCATCGTTAACTTCCTCAGTTGAACAAACATTTCAAATTCTCTACTCTCTAGCGGCTGTTGAGAGTCATTATAATAAAAAACTAGTTGTGCTCTTCTTCACTGTTGTTGTTCCTCTTTGAATGCTTTTTCTTGTTAAAGAACGTGAGTCTTGAACGAACATAGTTGCAGACCTAGATTCATAGATGATTTGTAATAATTCCATACGGAGCCAACTTCATTATATTAGGTTATCTGATTTAGAGCAAGACATATAAATGGCAGTTTCAATTGACCTTCGTTCTTAAGCAACTTCAGTAGATTATGTTTTGCAAGATTAATTTCATTTAGGTTTAAAAACAGGTTAATGTTGCGAACTCCCAATGTTTAACTTTGGGACAAAAAGGGAACTCGTTTCTGGATGATAGATTTTTGGTCTCTACTCATAGGGGCTTAAGAGTTGAGCACATGTCTAATTAGAATAGAATTTACTTCATAATTCTTTGTTGTTACAAGTGGGCGAATAGATCATGCCAATGTTCTTCATGGAGTAAATATTATGTCTTCGCTTTATTGTATCAAAGAAACATCTGATAGGCACCAGGTAGAAGTGTTGGCTATTATGTCAAAACCTGCCGGCAGTTTGAACTTTGATATGTGTTAAAGAGATTCTTTTCCTCCCCTACTAATAGGAAATGCTCAGAAGTTTTGCGCATGCATTTGATCCATACGTTTTGGGGTTTGCTCTTTGAGATGTAGTTGTGCCTTCATGTTATCTCAATTTGTGGCAGTGCTTGATGTGAAATAATTTTACACTTCTTGTGGCAGAGGTTCTGCTATAGCCATGAAAAATATGCTGGAGTCATCATTTCCTGGAGTTGAGGTTATTTTGGCAAATTACCCCCCGCCGCTTCCAAAGCGCCTTCTTAGTAAAGTAGTACCTGTCGTTCAATTTGGTATTATTGGAACAATAATGGCGGGGGAACAGATTTTTCCTAGGTTGGGGATGGCACCACCACCTTGGTATTATTCCTTGCGGGCAAATAGGTTTGGAAGCATTGCTAGCACTTGGCTGTTTGGAAATTTTATCCAGTCATTCTTACAAAGTTCCGGAGCCTTCGAAGTGTATTGCAATGGTGAAATGGTAAGATTCCTTTGAAAGCTCATTCTGGTTTTTTTTTTGGTGAGATGATTGTTTACTGATAGTTTCCGTTTTCTGAAGGTCTTTTCTAAGTTGAAGGAGCAGAGATTTCCTGGTGAGATTGAGTTGAGAGACGCTATTGGAAGGAAACTTTCTGGGTCGAGATTTGTTGACAACTCTGGAGTTTGGTCATAGGTATGTGACTTCTTGTGATCATTGCCATCAAATTAGCTACTGGTGAAGTTTAGATAAATCTAATCCAAGTTTATAATAGCCAAACAGGAGCTTGTCTTTGAGAGAGATTCAATTTCCATATGTCTGTTCTAAACATACTCCCAATTACTCTTACGAAATCAAACCTTTAAAATTTCAAATGCATCCCTCTCAAAAAGAAGTTTCAAATCTGTTGAAATTTTACCCTGATTTCGTCAATCTTTGTTATCATTTTGCATGCTTTTATGCAAAATATATAAAGAAATTGACATCTGTACATGGTAGGCTAGGTTTATGTTGTAACAAGTAAATATGGTAAATAATCAAA ATGGATCGAACTCAGATAGTTCTGTTAGGGCTGCCGATCTTTCTGCTTTTTACTGATATTGTGAATCTTTTCACTCCTCCGCCTCCGAAACCTGCCAATCATCCTCCACCTCGAGTTCAGTACCAGCCTAAATCTCAATCAGTCATCCAGGAACCGCTTGAATTTCCTACGGAGAAACGGACTGGAATCGGAGGAATTGGCCAGGGCAGCGTTATTAATATCAATTTCTGTGTTTCTTGTTCTTACAGTGGGCGAATAGATCATGCCAATGTTCTTCATGGAGTAAATATTATGTCTTCGCTTTATTGTATCAAAGAAACATCTGATAGGCACCAGGAAATGCTCAGAAGTTTTGCGCATGCATTTGATCCATACGTTTTGGGAGGTTCTGCTATAGCCATGAAAAATATGCTGGAGTCATCATTTCCTGGAGTTGAGGTTATTTTGGCAAATTACCCCCCGCCGCTTCCAAAGCGCCTTCTTAGTAAAGTAGTACCTGTCGTTCAATTTGGTATTATTGGAACAATAATGGCGGGGGAACAGATTTTTCCTAGGTTGGGGATGGCACCACCACCTTGGTATTATTCCTTGCGGGCAAATAGGTTTGGAAGCATTGCTAGCACTTGGCTGTTTGGAAATTTTATCCAGTCATTCTTACAAAGTTCCGGAGCCTTCGAAGTGTATTGCAATGGTGAAATGGTCTTTTCTAAGTTGAAGGAGCAGAGATTTCCTGGTGAGATTGAGTTGAGAGACGCTATTGGAAGGAAACTTTCTGGGTCGAGATTTGTTGACAACTCTGGAGTTTGGTCATAG ATGGATCGAACTCAGATAGTTCTGTTAGGGCTGCCGATCTTTCTGCTTTTTACTGATATTGTGAATCTTTTCACTCCTCCGCCTCCGAAACCTGCCAATCATCCTCCACCTCGAGTTCAGTACCAGCCTAAATCTCAATCAGTCATCCAGGAACCGCTTGAATTTCCTACGGAGAAACGGACTGGAATCGGAGGAATTGGCCAGGGCAGCGTTATTAATATCAATTTCTGTGTTTCTTGTTCTTACAGTGGGCGAATAGATCATGCCAATGTTCTTCATGGAGTAAATATTATGTCTTCGCTTTATTGTATCAAAGAAACATCTGATAGGCACCAGGAAATGCTCAGAAGTTTTGCGCATGCATTTGATCCATACGTTTTGGGAGGTTCTGCTATAGCCATGAAAAATATGCTGGAGTCATCATTTCCTGGAGTTGAGGTTATTTTGGCAAATTACCCCCCGCCGCTTCCAAAGCGCCTTCTTAGTAAAGTAGTACCTGTCGTTCAATTTGGTATTATTGGAACAATAATGGCGGGGGAACAGATTTTTCCTAGGTTGGGGATGGCACCACCACCTTGGTATTATTCCTTGCGGGCAAATAGGTTTGGAAGCATTGCTAGCACTTGGCTGTTTGGAAATTTTATCCAGTCATTCTTACAAAGTTCCGGAGCCTTCGAAGTGTATTGCAATGGTGAAATGGTCTTTTCTAAGTTGAAGGAGCAGAGATTTCCTGGTGAGATTGAGTTGAGAGACGCTATTGGAAGGAAACTTTCTGGGTCGAGATTTGTTGACAACTCTGGAGTTTGGTCATAG MDRTQIVLLGLPIFLLFTDIVNLFTPPPPKPANHPPPRVQYQPKSQSVIQEPLEFPTEKRTGIGGIGQGSVININFCVSCSYSGRIDHANVLHGVNIMSSLYCIKETSDRHQEMLRSFAHAFDPYVLGGSAIAMKNMLESSFPGVEVILANYPPPLPKRLLSKVVPVVQFGIIGTIMAGEQIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGAFEVYCNGEMVFSKLKEQRFPGEIELRDAIGRKLSGSRFVDNSGVWS Homology
BLAST of Spg033224 vs. NCBI nr
Match: XP_038903844.1 (selT-like protein [Benincasa hispida] >XP_038903845.1 selT-like protein [Benincasa hispida] >XP_038903846.1 selT-like protein [Benincasa hispida]) HSP 1 Score: 409.8 bits (1052), Expect = 1.8e-110 Identity = 216/272 (79.41%), Postives = 219/272 (80.51%), Query Frame = 0
BLAST of Spg033224 vs. NCBI nr
Match: XP_022935564.1 (selT-like protein [Cucurbita moschata] >XP_023527743.1 selT-like protein [Cucurbita pepo subsp. pepo] >KAG6580468.1 SelT-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017218.1 SelT-like protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 404.8 bits (1039), Expect = 5.7e-109 Identity = 210/271 (77.49%), Postives = 215/271 (79.34%), Query Frame = 0
BLAST of Spg033224 vs. NCBI nr
Match: XP_022983567.1 (selT-like protein [Cucurbita maxima]) HSP 1 Score: 401.7 bits (1031), Expect = 4.8e-108 Identity = 209/271 (77.12%), Postives = 214/271 (78.97%), Query Frame = 0
BLAST of Spg033224 vs. NCBI nr
Match: XP_008442408.1 (PREDICTED: selT-like protein [Cucumis melo] >ADN33788.1 selenoprotein t precursor [Cucumis melo subsp. melo] >ADN34273.1 selenoprotein t [Cucumis melo subsp. melo] >KAA0044178.1 selT-like protein [Cucumis melo var. makuwa] >TYK24955.1 selT-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 401.4 bits (1030), Expect = 6.3e-108 Identity = 211/272 (77.57%), Postives = 216/272 (79.41%), Query Frame = 0
BLAST of Spg033224 vs. NCBI nr
Match: XP_004137713.1 (selT-like protein [Cucumis sativus] >KGN58749.1 hypothetical protein Csa_001631 [Cucumis sativus]) HSP 1 Score: 392.9 bits (1008), Expect = 2.2e-105 Identity = 208/272 (76.47%), Postives = 211/272 (77.57%), Query Frame = 0
BLAST of Spg033224 vs. ExPASy Swiss-Prot
Match: Q9STZ2 (SelT-like protein OS=Arabidopsis thaliana OX=3702 GN=At3g47300 PE=2 SV=2) HSP 1 Score: 262.3 bits (669), Expect = 6.0e-69 Identity = 139/254 (54.72%), Postives = 166/254 (65.35%), Query Frame = 0
BLAST of Spg033224 vs. ExPASy Swiss-Prot
Match: Q9BN19 (Putative esophageal gland cell secretory protein 6 OS=Heterodera glycines OX=51029 GN=HSP6 PE=2 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 5.9e-16 Identity = 41/122 (33.61%), Postives = 72/122 (59.02%), Query Frame = 0
BLAST of Spg033224 vs. ExPASy Swiss-Prot
Match: Q9VMV6 (Thioredoxin reductase-like selenoprotein T homolog CG3887 OS=Drosophila melanogaster OX=7227 GN=SelT PE=2 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 9.7e-11 Identity = 40/127 (31.50%), Postives = 67/127 (52.76%), Query Frame = 0
BLAST of Spg033224 vs. ExPASy Swiss-Prot
Match: Q19892 (Thioredoxin reductase-like selenoprotein T homolog selt-1.2 OS=Caenorhabditis elegans OX=6239 GN=selt-1.2 PE=2 SV=2) HSP 1 Score: 68.6 bits (166), Expect = 1.3e-10 Identity = 34/123 (27.64%), Postives = 63/123 (51.22%), Query Frame = 0
BLAST of Spg033224 vs. ExPASy Swiss-Prot
Match: Q9U3N5 (Thioredoxin reductase-like selenoprotein T homolog selt-1.1 OS=Caenorhabditis elegans OX=6239 GN=selt-1.1 PE=2 SV=2) HSP 1 Score: 64.3 bits (155), Expect = 2.4e-09 Identity = 32/120 (26.67%), Postives = 59/120 (49.17%), Query Frame = 0
BLAST of Spg033224 vs. ExPASy TrEMBL
Match: A0A6J1F5S6 (selT-like protein OS=Cucurbita moschata OX=3662 GN=LOC111442401 PE=4 SV=1) HSP 1 Score: 404.8 bits (1039), Expect = 2.8e-109 Identity = 210/271 (77.49%), Postives = 215/271 (79.34%), Query Frame = 0
BLAST of Spg033224 vs. ExPASy TrEMBL
Match: A0A6J1IZR1 (selT-like protein OS=Cucurbita maxima OX=3661 GN=LOC111482133 PE=4 SV=1) HSP 1 Score: 401.7 bits (1031), Expect = 2.3e-108 Identity = 209/271 (77.12%), Postives = 214/271 (78.97%), Query Frame = 0
BLAST of Spg033224 vs. ExPASy TrEMBL
Match: E5GBE6 (Selenoprotein t OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 401.4 bits (1030), Expect = 3.1e-108 Identity = 211/272 (77.57%), Postives = 216/272 (79.41%), Query Frame = 0
BLAST of Spg033224 vs. ExPASy TrEMBL
Match: A0A5D3DMW2 (SelT-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00710 PE=4 SV=1) HSP 1 Score: 401.4 bits (1030), Expect = 3.1e-108 Identity = 211/272 (77.57%), Postives = 216/272 (79.41%), Query Frame = 0
BLAST of Spg033224 vs. ExPASy TrEMBL
Match: A0A1S3B6A1 (selT-like protein OS=Cucumis melo OX=3656 GN=LOC103486285 PE=4 SV=1) HSP 1 Score: 401.4 bits (1030), Expect = 3.1e-108 Identity = 211/272 (77.57%), Postives = 216/272 (79.41%), Query Frame = 0
BLAST of Spg033224 vs. TAIR 10
Match: AT5G58640.1 (Selenoprotein, Rdx type ) HSP 1 Score: 276.6 bits (706), Expect = 2.2e-74 Identity = 142/263 (53.99%), Postives = 179/263 (68.06%), Query Frame = 0
BLAST of Spg033224 vs. TAIR 10
Match: AT5G58640.2 (Selenoprotein, Rdx type ) HSP 1 Score: 270.0 bits (689), Expect = 2.0e-72 Identity = 141/263 (53.61%), Postives = 178/263 (67.68%), Query Frame = 0
BLAST of Spg033224 vs. TAIR 10
Match: AT3G47300.1 (SELT-like protein precursor ) HSP 1 Score: 262.3 bits (669), Expect = 4.3e-70 Identity = 139/254 (54.72%), Postives = 166/254 (65.35%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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