Spg032317 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg032317
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Retrotransposon protein
Location	scaffold2: 33230665 .. 33235082 (+)
RNA-Seq Expression	Spg032317
Synteny	Spg032317

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCTTAGTTCATGTTGGCGGTTGGAGGTCCGATAATGGGACGTTCAGATCTGGGTATCAAGTGCAACTGGAACACTTGATGAGGGAGAAACTTCCTGGACGGGACGTTCCAGCACAGAGCTGCATTGAATCCAGGGTTCGCACCCTAAAGAAACAATACCAGACTATTGCAGAGATGATGGGCCCTGGATGCAGTGGCTTCGGCTGGAACGAGGAATTTAAGTGCATCGAGGCAGAGAAAGAAACATTCGACCTATGGGTGAAGGTAAGAACGTTTGTCCATGTTAACTACTCAAAATTTATTGCTTCCTAACATAAACTATCGGGTGAATGCAGACTCATCCAATTGCAAAGGGCATGCTTAACAAGCCTTTCCCCCCATTTTGAGGACCTGGCATATGTATTTGGGAAGGATAGAGCCACGGGGGGGGGGGGTGTCAGAGGTGATGGCAGAGATGGGGTCTAACGTACCAGATGATGCAGTAAACCTAAGTGGATCCCCGAACAACGACATCCCCATCTCGCCGTTCACCATGCCTAATGTGAACATGTCAGAGGATGAGCCTCGGGTGACGCCGGACAGTCAAACTTACGCAATTGGAAATTCGTCATGCACATCACAGAAGCTGTGAGAGAGGGAATGGCCTTGTTCACAGAACAACTTAAGTCCATTGCTGACTGGCCAGAAAAAAAACGTGCCACAGAGGCAGAGTTCCGGGATAAAATTGTCTCCCACTTGATGGAGGTACCCGACCTGGAGAACCGAAAAAGGGTGAAGATCATGGATATCCTTTTCAATAACATGAAAGCGACAGGGAGCTTCCTCTCCATTCTTGCTCCTTTGAAGTTGGAGTATTGTGAATACCTCTTGGACAAACACAGTTGAGCCACCGTTCCTCGACCGATGTGCTGCTTCACATTTATCTGTTCTTCGAAGACATTTCTATCTATATTTTGTGCTCATATATGTATATGGAAAGGTATTTTTGTGCCACCACGGGCGTGGCCACTAGACGTCAACCTTACCTCCCACATGTATTTTTTTTTTTTTTTGTGCAACTGTAGGGAGTTAAATATTAGGTTGTCTTTCTACATATATAAATATAGACTTCTATTACATAATTTCTTCGTACGTAAACATTTATCATTTTTACGTTCAAAATATAGAATTGAAACGAATATGGTTTTTCAATATGAAATCATGTAATAACTTCAATTGTGGAAAAATCATGACCCTAAGCCAAAGAAAGTGAATCCTTACCTTGGGTTCTTTTTATTTCATTTGAAGTTAAACACATCATTCAACCCGTCTACCCAATACTTTCTTTTTGTAACAATTGAATCCATGTTCATTTTTTATTCATATTTGCAAACTACAATATTGGACATACGAAGTTGTTTGAGTGAATAAAAAAAATGGTCAGGAAAAAAAAATCAACTTGAATATTTGATTCAGATTCTCATGTGAAACATATCAGCAATCCAAACACAGGATATTTTAACCCATACTAAAATAATCTGCATACCAAACACAGATTATTTTATCCCAGACTAAAATAATCTGCATCCCAAACACAAATTTTTTTATCCCAGACTATGATAATCTACACCCCAAACACAGATTATTTTATCCCAGACTATAATAATCTGCACCCCAAACACAGATTATTATAACCCCCAGACTATTATAATTCCCAGATTATTATAACCACCAGATATAATAACCAATTCAGCGCCCCAAACAGCCACTAAGAGTAGATATTGCATAAATGAAATCAATCCATAAACATACACGAATTAATCCATAAAACACACCAACAAGCTACATCAATCCCTAAGATAAGAGTCTAGCTGTAACGCCCTGCGTTTCAAAATTTAGCCTTTTTGGGATATCTTGGATCAATTATTGAGTTCAATTGGAATTAAGTTGATGGAATCAAATCAATCCTTTTTAAGTGATGGAATTTTGGTTTAGGAATCAAATTCTTGAATTCAATTTTGTTTATAAAAAAATTTGATTACCCAATGATTTACTCAGTTTAGAAAGGAAATTAGGGCCTTAATTGGAGTTTTAAAGATTGGGTTAAATTAAGAGAAAAACAAAAGAAAACCCTAGAGCCCATCTTTTTCCCTCTCTTTGTCGTGTGTAGCCGCCACTCCAGCCCTCCAACGTGTTTGTCTTCTTCGAGCAGAGTCGCCCGAAGCATCTCTCAGCCTCTCTCTCTCTCTCTCTCACACCCGTTTTCTCTTCCTCCGCCAGCACCCACGCGAGCTTCCTCCACCTCCCTCTCTCGGCTTTCAGTTCCGTCGGCCAGCACCCACCGTCGCCTTGTCGTGCCTCGCCGGAATCTCGTCTCCCTCACTCTCTCTCACGCGGTTCTCGTTTCGCATCCCTGCCTCCAGCGATCCCTCTCCTCTTTTCCGGCGAGCCTGCAACACTTACTGACGACCACCACCACGAACGACGCCCGCACGTTTTGGCAATGATTTTGGCGTGGATTTTCCCACTGGCGATTTGCGTGATGTCCTACTCGCGTAGCGATAGTAGTGCGTCAGCCACAACCCGTCGTCGATGGTTGAAGAATGGTTCGACAGCTTCAACTTCTCCTCGACATCGTCTGTTCCTTCTCCGACATCAACGTGCGATGATGAGCAGCGCACGAGCCCAAAAATCCCTCCCCCACGCACGTGATTTTGTACATCAGTAAGCAATCAGTTCGATTCTCACCTTTTTGGTAAGATTTAACGCTTAACCATGTTCTGTTCGACTTTAAATTAAATCACCCATAGCCAAAAGGTCTTTGATATGAATTACCCACTCTCTAACGACTCCAAATTTGCAGGATTAGGCCTTTGAATCAATTTCCAGCAAGTTGTTAGGTTCGAATCTGACTTTTGGCGTTTACTCATAGCCCAAAAGGTCTTATATCAGATTGCCCATGGTTCTGCGGCTTTAGATCAACGTTTTTGGAGCTTTTCGGTTACTGTCCGGCAAGGACCCAAGTTTATTTTGGTGAGTTTTAGGTGCTTAAGCATTTTTCAGATCGTTTGAATTAGTTTGAGAGCTTTAGATCAATTTCTAATCTCTAATAACTCTTGGGTTATAGTTTTGAAGTGTTCGAATGGCCGTTAGAGTTGTGTTGGGTAAGAGCATTCTCTTGAATATCGTTTTGCTCTTAATTGAGGTTCTGAGTAGATTCCTAGCCTTGAAACCCTGCCTTTATTATTGCAGGAGCTCGTTCGGTTCGCTTAAGAGCATTTTAGCAATTAGTAAGTGGAATTCTATCTGTTGGGTCTGGTGGTTGGTGTGCTAGCATGTTATGTGCTTTGTTGTTCAATTTAGTATATTTGGTATATATATGCTTGTTGTTTGTTATTGACAAAATTTTAAACATGTTGAACTGATGTGTTGATCTGTCATGTTGAATTATGATGAGAGGTTGTTCTGTTGTGATTGACTGTAAAGCATGAATTTAATGTAGAGAACATGTTGTTTGGTTGTTACATAGACTAAACGCATAACACGAATTAGAAAATGTATGGAATATGCATTCTGATATGTGAGCATGTTATTGGCATAAAACATGGTCTAGAAACATGATGAGTAGGATTCATGCATTCTAGTGAAATTGTGAGGTCAGAGGACCTTGTGTGTTAAAAAGGAAAGTTAGGTGAATACCAGGTGCCTCGGGTAAAAATGGTCGAGGGGTGGTATGTCACCAATGGATTAAGAGGAGCATCCGGTGCCTTGGGTAATATGGCCAAGGGGCGATGTGATGAGTCTATACGTTGTGAAAGTCATCGGGTGCCTTGGGTAATATGGCCAAGGGGCGATGTACAGTTTGATTATGAAATCATCGGGTGCCTTGGGTAATATGGCCAAGGGGCGATGCACAGTTCGAGGCCTTGGGTAATATGGTCAAGGGTCGAACGCTGAGCGCCGTAGAGAAACGTCGAGGCCCTGGGTAATATGGTCAGGGGTCGGCGTGACTCGAAGGAGTCAGTCTCAGAGAGCTTTGTGAGGGCTATGAGTGTTGAGCGAGCTCGTGGAGCTTGAGAGAAAACTAAGTTGCATGGCATGATGCGGAATTCATGTGTTTTGAGTATGCATGGCATGGTGCGGAATTCATGTGTTTTGAGTGTACATTGCATGGTGCGGAATTCATGTGTTAGGTGCATGGTTGTTGCACGATTGTATTAGTTGAGTATGTTCTATGTGCTGATTGCTCACCTTGCATATAAGGCATGTTATTGTGATTGAAAAGCATGACGTTTGCCTTGTATGTTGTACGTTGTTTGATGGCTCTTCAGGTGTGAGCCACTTACTTAGTACCGCTGTATTGTATTGATCCACCACCAGGTTTTGCAGGTGATGAGGAATACTACGAGCCTGGTAATGCTGAGGAGCACGCTTGA

mRNA sequence

ATGTCCTTAGTTCATGTTGGCGGTTGGAGGTCCGATAATGGGACGTTCAGATCTGGGTATCAAGTGCAACTGGAACACTTGATGAGGGAGAAACTTCCTGGACGGGACGTTCCAGCACAGAGCTGCATTGAATCCAGGGTTCGCACCCTAAAGAAACAATACCAGACTATTGCAGAGATGATGGGCCCTGGATGCAGTGGCTTCGGCTGGAACGAGGAATTTAAGTGCATCGAGGCAGAGAAAGAAACATTCGACCTATGGGTGAAGTCAAACTTACGCAATTGGAAATTCGTCATGCACATCACAGAAGCTGTGAGAGAGGGAATGGCCTTGTTCACAGAACAACTTAAGTCCATTGCTGACTGGCCAGAAAAAAAACGTGCCACAGAGGCAGAGTTCCGGGATAAAATTGTCTCCCACTTGATGGAGGTACCCGACCTGGAGAACCGAAAAAGGGTGAAGATCATGGATATCCTTTTCAATAACATGAAAGCGACAGGGAGCTTCCTCTCCATTCTTGCTCCTTTGAAGTTGGAGTATTGTGAATACCTCTTGGACAAACACACCGCCACTCCAGCCCTCCAACGTGTTTGTCTTCTTCGAGCAGAGTCGCCCGAAGCATCTCTCAGCCTCTCTCTCTCTCTCTCTCACACCCGTTTTCTCTTCCTCCGCCAGCACCCACGCGAGCTTCCTCCACCTCCCTCTCTCGGCTTTCAGTTCCGTCGGCCAGCACCCACCGTCGCCTTGTCGTGCCTCGCCGGAATCTCTGTTCGAATGGCCGTTAGAGTTGTGTTGGGTAAGAGCATTCTCTTGAATATCGTTTTGCTCTTAATTGAGGTTCTGAGTAGATTCCTAGCCTTGAAACCCTGCCTTTATTATTGCAGGAGCTCGTTCGGTTCGCTTAAGAGCATTTTAGCAATTAGTGAATACCAGGTGCCTCGGGTAAAAATGGTCGAGGGGTGGTATGTCACCAATGGATTAAGAGGAGCATCCGGTGCCTTGGGTAATATGGCCAAGGGGCGATGTGATGAGTCTATACGTTGTGAAAGTCATCGGGTGCCTTGGTTCGAGGCCTTGGGTAATATGGTCAAGGGTCGAACGCTGAGCGCCGTAGAGAAACGTCGAGGCCCTGGGCATGTTATTGTGATTGAAAAGCATGACGTTTGCCTTGTATGTTGTGATGAGGAATACTACGAGCCTGGTAATGCTGAGGAGCACGCTTGA

Coding sequence (CDS)

ATGTCCTTAGTTCATGTTGGCGGTTGGAGGTCCGATAATGGGACGTTCAGATCTGGGTATCAAGTGCAACTGGAACACTTGATGAGGGAGAAACTTCCTGGACGGGACGTTCCAGCACAGAGCTGCATTGAATCCAGGGTTCGCACCCTAAAGAAACAATACCAGACTATTGCAGAGATGATGGGCCCTGGATGCAGTGGCTTCGGCTGGAACGAGGAATTTAAGTGCATCGAGGCAGAGAAAGAAACATTCGACCTATGGGTGAAGTCAAACTTACGCAATTGGAAATTCGTCATGCACATCACAGAAGCTGTGAGAGAGGGAATGGCCTTGTTCACAGAACAACTTAAGTCCATTGCTGACTGGCCAGAAAAAAAACGTGCCACAGAGGCAGAGTTCCGGGATAAAATTGTCTCCCACTTGATGGAGGTACCCGACCTGGAGAACCGAAAAAGGGTGAAGATCATGGATATCCTTTTCAATAACATGAAAGCGACAGGGAGCTTCCTCTCCATTCTTGCTCCTTTGAAGTTGGAGTATTGTGAATACCTCTTGGACAAACACACCGCCACTCCAGCCCTCCAACGTGTTTGTCTTCTTCGAGCAGAGTCGCCCGAAGCATCTCTCAGCCTCTCTCTCTCTCTCTCTCACACCCGTTTTCTCTTCCTCCGCCAGCACCCACGCGAGCTTCCTCCACCTCCCTCTCTCGGCTTTCAGTTCCGTCGGCCAGCACCCACCGTCGCCTTGTCGTGCCTCGCCGGAATCTCTGTTCGAATGGCCGTTAGAGTTGTGTTGGGTAAGAGCATTCTCTTGAATATCGTTTTGCTCTTAATTGAGGTTCTGAGTAGATTCCTAGCCTTGAAACCCTGCCTTTATTATTGCAGGAGCTCGTTCGGTTCGCTTAAGAGCATTTTAGCAATTAGTGAATACCAGGTGCCTCGGGTAAAAATGGTCGAGGGGTGGTATGTCACCAATGGATTAAGAGGAGCATCCGGTGCCTTGGGTAATATGGCCAAGGGGCGATGTGATGAGTCTATACGTTGTGAAAGTCATCGGGTGCCTTGGTTCGAGGCCTTGGGTAATATGGTCAAGGGTCGAACGCTGAGCGCCGTAGAGAAACGTCGAGGCCCTGGGCATGTTATTGTGATTGAAAAGCATGACGTTTGCCTTGTATGTTGTGATGAGGAATACTACGAGCCTGGTAATGCTGAGGAGCACGCTTGA

Protein sequence

MSLVHVGGWRSDNGTFRSGYQVQLEHLMREKLPGRDVPAQSCIESRVRTLKKQYQTIAEMMGPGCSGFGWNEEFKCIEAEKETFDLWVKSNLRNWKFVMHITEAVREGMALFTEQLKSIADWPEKKRATEAEFRDKIVSHLMEVPDLENRKRVKIMDILFNNMKATGSFLSILAPLKLEYCEYLLDKHTATPALQRVCLLRAESPEASLSLSLSLSHTRFLFLRQHPRELPPPPSLGFQFRRPAPTVALSCLAGISVRMAVRVVLGKSILLNIVLLLIEVLSRFLALKPCLYYCRSSFGSLKSILAISEYQVPRVKMVEGWYVTNGLRGASGALGNMAKGRCDESIRCESHRVPWFEALGNMVKGRTLSAVEKRRGPGHVIVIEKHDVCLVCCDEEYYEPGNAEEHA

Homology

[Close]

BLAST of Spg032317 vs. NCBI nr
Match: XP_008441954.1 (PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo] >KAA0047736.1 retrotransposon protein [Cucumis melo var. makuwa] >TYK08388.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 166.4 bits (420), Expect = 5.2e-37
Identity = 98/278 (35.25%), Postives = 126/278 (45.32%), Query Frame = 0


Query: 1   MSLVHVGGWRSDNGTFRSGYQVQLEHLMREKLPGRDVPAQSCIESRVRTLKKQYQTIAEM 60
           + LV  GGWRSDNGTF+ GY  QL+ +M EKLPG ++   S I+  V++LKK Y  IAEM
Sbjct: 25  VELVSSGGWRSDNGTFQPGYLAQLQRMMAEKLPGTNIQESSTIDCHVKSLKKTYHAIAEM 84

Query: 61  MGPGCSGFGWNEEFKCIEAEKETFDLWVKSN----------------------------- 120
            GP CSGFGWNEEF+CI AE++ FD W+KS+                             
Sbjct: 85  RGPSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKGLLHKSFPYYDDLSYVFGKDRATGA 144

Query: 121 -------------------------------------------------------LRNWK 180
                                                                   RN  
Sbjct: 145 RSETFPNVGSNVSNMFNDTIPLGDSHDEDIPTMYSQGVHMSPDEMFGIRAGQASERRNCS 204

Query: 181 FV---------MHITEAVREGMALFTEQLKSIADWPEKKRATEAEFRDKIVSHLMEVPDL 186
            V             E +R  M    EQLK+IADWP++KRA E E R ++V  L ++P L
Sbjct: 205 SVSKRKRGSERYETVEVIRSVMEFGNEQLKAIADWPKEKRAMEVEMRAQVVKQLQDIPKL 264

[Close]

BLAST of Spg032317 vs. NCBI nr
Match: KAA0059630.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK08162.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 142.9 bits (359), Expect = 6.1e-30
Identity = 76/192 (39.58%), Postives = 106/192 (55.21%), Query Frame = 0


Query: 1   MSLVHVGGWRSDNGTFRSGYQVQLEHLMREKLPGRDVPAQSCIESRVRTLKKQYQTIAEM 60
           M LV +GGW+SDNGTFR GY  QL  +M EKLPG  V A + I+ R++TLK+ +Q IAEM
Sbjct: 25  MELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEM 84

Query: 61  MGPGCSGFGWNEEFKCIEAEKETFDLWVK-------SNLRNWKFVMHITEAVREGMALFT 120
            GP CS FGWN++ KCI AEKE FD WV+       S  +         EA+   +    
Sbjct: 85  RGPACSDFGWNDKEKCIIAEKELFDNWVRVRTGSSGSKRKRGSQRDFDVEAIHLALDQTN 144

Query: 121 EQLKSIADWPEKKRATEAEFRDKIVSHLMEVPDLENRKRVKIMDILFNNMKATGSFLSIL 180
           +QL+ IA+WP +  A +   R +    L E+P+L +  R  +   L + M     F+ + 
Sbjct: 145 KQLRQIAEWPARNLANDNHVRTEFFRILCEMPELTSLDRALLQRHLLSRMDDFRGFVLMP 204

Query: 181 APLKLEYCEYLL 186
              +  +C  LL
Sbjct: 205 EDEREGFCRVLL 216

[Close]

BLAST of Spg032317 vs. NCBI nr
Match: KAA0053511.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 131.0 bits (328), Expect = 2.4e-26
Identity = 82/249 (32.93%), Postives = 110/249 (44.18%), Query Frame = 0


Query: 1   MSLVHVGGWRSDNGTFRSGYQVQLEHLMREKLPGRDVPAQSCIESRVRTLKKQYQTIAEM 60
           M LV +GGW+SDNGTFR GY  QL  +M EKLPG  V A + I+ R++TLK+ +Q I EM
Sbjct: 25  MELVSMGGWKSDNGTFRLGYLAQLVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIVEM 84

Query: 61  MGPGCSGFGWNEEFKCIEAEKETFDLWVKSN-----LRNWKFVMH--------------- 120
            GP CSGFGWN+E KCI AEKE FD WV+S+     L N  F  +               
Sbjct: 85  RGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFDRDRATGR 144

Query: 121 --------------------------------------------ITEAVREGMALFTEQL 180
                                                         EA+   +    EQL
Sbjct: 145 FAETFADGVDISQDDVRASRPSRASEGRTGSSGSKRKRGSQRDFDVEAIHLALDQTNEQL 204

Query: 181 KSIADWPEKKRATEAEFRDKIVSHLMEVPDLENRKRVKIMDILFNNMKATGSFLSILAPL 186
           K IA+WP +  A +   R +    L E+P+L +  R  +   L + M     F+ +    
Sbjct: 205 KQIAEWPARNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDE 264

[Close]

BLAST of Spg032317 vs. NCBI nr
Match: KAA0050400.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 131.0 bits (328), Expect = 2.4e-26
Identity = 58/91 (63.74%), Postives = 70/91 (76.92%), Query Frame = 0


Query: 1   MSLVHVGGWRSDNGTFRSGYQVQLEHLMREKLPGRDVPAQSCIESRVRTLKKQYQTIAEM 60
           M LV +GGW+SDNGTFR GY  QL  +M EKLPG  V A + I+ R++TLK+ +QTIAEM
Sbjct: 25  MELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQTIAEM 84

Query: 61  MGPGCSGFGWNEEFKCIEAEKETFDLWVKSN 92
            GP CSGFGWN+E KCI AEKE FD WV+S+
Sbjct: 85  RGPACSGFGWNDEEKCIVAEKELFDNWVRSH 115

[Close]

BLAST of Spg032317 vs. NCBI nr
Match: KAA0051960.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 129.8 bits (325), Expect = 5.3e-26
Identity = 86/278 (30.94%), Postives = 117/278 (42.09%), Query Frame = 0


Query: 1   MSLVHVGGWRSDNGTFRSGYQVQLEHLMREKLPGRDVPAQSCIESRVRTLKKQYQTIAEM 60
           M LV+ GGWRSDNGTFR GY  QL  +M  K+PG ++ A S I+SR++ +K+ +  +AEM
Sbjct: 25  MELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSNIHA-STIDSRIKLMKRMFHALAEM 84

Query: 61  MGPGCSGFGWNEEFKCIEAEKETFDLW---VKSNLRNWKFVM------------------ 120
            GP CSGFGWN+E KCI AEKE FD W       L N +FV                   
Sbjct: 85  RGPNCSGFGWNDEKKCIVAEKEVFDDWSHPAAKGLLNKEFVHYDELSYVFGKDRAIGGRA 144

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 145 ESFADIGSNDPPGYDAGAADAMPDTDFPPMYSPGLNMSPDDLMETRTARVSERRNVSSGS 204

Query: 181 ------HITEA---VREGMALFTEQLKSIADWPEKKRATEAEFRDKIVSHLMEVPDLENR 189
                 H T++   VR  +    EQL  IA+WP  +R    + R +IV HL  +P+L   
Sbjct: 205 KRKRPGHATDSGDIVRTPIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLM 264

[Close]

BLAST of Spg032317 vs. ExPASy TrEMBL
Match: A0A5A7U0H7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G002060 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 2.5e-37
Identity = 98/278 (35.25%), Postives = 126/278 (45.32%), Query Frame = 0


Query: 1   MSLVHVGGWRSDNGTFRSGYQVQLEHLMREKLPGRDVPAQSCIESRVRTLKKQYQTIAEM 60
           + LV  GGWRSDNGTF+ GY  QL+ +M EKLPG ++   S I+  V++LKK Y  IAEM
Sbjct: 25  VELVSSGGWRSDNGTFQPGYLAQLQRMMAEKLPGTNIQESSTIDCHVKSLKKTYHAIAEM 84

Query: 61  MGPGCSGFGWNEEFKCIEAEKETFDLWVKSN----------------------------- 120
            GP CSGFGWNEEF+CI AE++ FD W+KS+                             
Sbjct: 85  RGPSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKGLLHKSFPYYDDLSYVFGKDRATGA 144

Query: 121 -------------------------------------------------------LRNWK 180
                                                                   RN  
Sbjct: 145 RSETFPNVGSNVSNMFNDTIPLGDSHDEDIPTMYSQGVHMSPDEMFGIRAGQASERRNCS 204

Query: 181 FV---------MHITEAVREGMALFTEQLKSIADWPEKKRATEAEFRDKIVSHLMEVPDL 186
            V             E +R  M    EQLK+IADWP++KRA E E R ++V  L ++P L
Sbjct: 205 SVSKRKRGSERYETVEVIRSVMEFGNEQLKAIADWPKEKRAMEVEMRAQVVKQLQDIPKL 264

[Close]

BLAST of Spg032317 vs. ExPASy TrEMBL
Match: A0A1S3B4L3 (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 2.5e-37
Identity = 98/278 (35.25%), Postives = 126/278 (45.32%), Query Frame = 0


Query: 1   MSLVHVGGWRSDNGTFRSGYQVQLEHLMREKLPGRDVPAQSCIESRVRTLKKQYQTIAEM 60
           + LV  GGWRSDNGTF+ GY  QL+ +M EKLPG ++   S I+  V++LKK Y  IAEM
Sbjct: 25  VELVSSGGWRSDNGTFQPGYLAQLQRMMAEKLPGTNIQESSTIDCHVKSLKKTYHAIAEM 84

Query: 61  MGPGCSGFGWNEEFKCIEAEKETFDLWVKSN----------------------------- 120
            GP CSGFGWNEEF+CI AE++ FD W+KS+                             
Sbjct: 85  RGPSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKGLLHKSFPYYDDLSYVFGKDRATGA 144

Query: 121 -------------------------------------------------------LRNWK 180
                                                                   RN  
Sbjct: 145 RSETFPNVGSNVSNMFNDTIPLGDSHDEDIPTMYSQGVHMSPDEMFGIRAGQASERRNCS 204

Query: 181 FV---------MHITEAVREGMALFTEQLKSIADWPEKKRATEAEFRDKIVSHLMEVPDL 186
            V             E +R  M    EQLK+IADWP++KRA E E R ++V  L ++P L
Sbjct: 205 SVSKRKRGSERYETVEVIRSVMEFGNEQLKAIADWPKEKRAMEVEMRAQVVKQLQDIPKL 264

[Close]

BLAST of Spg032317 vs. ExPASy TrEMBL
Match: A0A5A7UWW9 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold886G00480 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 3.0e-30
Identity = 76/192 (39.58%), Postives = 106/192 (55.21%), Query Frame = 0


Query: 1   MSLVHVGGWRSDNGTFRSGYQVQLEHLMREKLPGRDVPAQSCIESRVRTLKKQYQTIAEM 60
           M LV +GGW+SDNGTFR GY  QL  +M EKLPG  V A + I+ R++TLK+ +Q IAEM
Sbjct: 25  MELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEM 84

Query: 61  MGPGCSGFGWNEEFKCIEAEKETFDLWVK-------SNLRNWKFVMHITEAVREGMALFT 120
            GP CS FGWN++ KCI AEKE FD WV+       S  +         EA+   +    
Sbjct: 85  RGPACSDFGWNDKEKCIIAEKELFDNWVRVRTGSSGSKRKRGSQRDFDVEAIHLALDQTN 144

Query: 121 EQLKSIADWPEKKRATEAEFRDKIVSHLMEVPDLENRKRVKIMDILFNNMKATGSFLSIL 180
           +QL+ IA+WP +  A +   R +    L E+P+L +  R  +   L + M     F+ + 
Sbjct: 145 KQLRQIAEWPARNLANDNHVRTEFFRILCEMPELTSLDRALLQRHLLSRMDDFRGFVLMP 204

Query: 181 APLKLEYCEYLL 186
              +  +C  LL
Sbjct: 205 EDEREGFCRVLL 216

[Close]

BLAST of Spg032317 vs. ExPASy TrEMBL
Match: A0A5A7U5A6 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1166G00140 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.2e-26
Identity = 58/91 (63.74%), Postives = 70/91 (76.92%), Query Frame = 0


Query: 1   MSLVHVGGWRSDNGTFRSGYQVQLEHLMREKLPGRDVPAQSCIESRVRTLKKQYQTIAEM 60
           M LV +GGW+SDNGTFR GY  QL  +M EKLPG  V A + I+ R++TLK+ +QTIAEM
Sbjct: 25  MELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQTIAEM 84

Query: 61  MGPGCSGFGWNEEFKCIEAEKETFDLWVKSN 92
            GP CSGFGWN+E KCI AEKE FD WV+S+
Sbjct: 85  RGPACSGFGWNDEEKCIVAEKELFDNWVRSH 115

[Close]

BLAST of Spg032317 vs. ExPASy TrEMBL
Match: A0A5A7UIZ2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold190G00680 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.2e-26
Identity = 82/249 (32.93%), Postives = 110/249 (44.18%), Query Frame = 0


Query: 1   MSLVHVGGWRSDNGTFRSGYQVQLEHLMREKLPGRDVPAQSCIESRVRTLKKQYQTIAEM 60
           M LV +GGW+SDNGTFR GY  QL  +M EKLPG  V A + I+ R++TLK+ +Q I EM
Sbjct: 25  MELVSMGGWKSDNGTFRLGYLAQLVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIVEM 84

Query: 61  MGPGCSGFGWNEEFKCIEAEKETFDLWVKSN-----LRNWKFVMH--------------- 120
            GP CSGFGWN+E KCI AEKE FD WV+S+     L N  F  +               
Sbjct: 85  RGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFDRDRATGR 144

Query: 121 --------------------------------------------ITEAVREGMALFTEQL 180
                                                         EA+   +    EQL
Sbjct: 145 FAETFADGVDISQDDVRASRPSRASEGRTGSSGSKRKRGSQRDFDVEAIHLALDQTNEQL 204

Query: 181 KSIADWPEKKRATEAEFRDKIVSHLMEVPDLENRKRVKIMDILFNNMKATGSFLSILAPL 186
           K IA+WP +  A +   R +    L E+P+L +  R  +   L + M     F+ +    
Sbjct: 205 KQIAEWPARNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDE 264

The following BLAST results are available for this feature:

BLAST of Spg032317 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008441954.1	5.2e-37	35.25	PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo] >KAA0047736.1 ret...	[more]
KAA0059630.1	6.1e-30	39.58	retrotransposon protein [Cucumis melo var. makuwa] >TYK08162.1 retrotransposon p...	[more]
KAA0053511.1	2.4e-26	32.93	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0050400.1	2.4e-26	63.74	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0051960.1	5.3e-26	30.94	retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of Spg032317 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg032317 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U0H7	2.5e-37	35.25	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B4L3	2.5e-37	35.25	uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=...	[more]
A0A5A7UWW9	3.0e-30	39.58	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7U5A6	1.2e-26	63.74	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7UIZ2	1.2e-26	32.93	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of Spg032317 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR46250	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED	coord: 3..91

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg032317.1	Spg032317.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane