Spg030996 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg030996
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Locationscaffold10: 21821561 .. 21825214 (-)
RNA-Seq ExpressionSpg030996
SyntenySpg030996
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAAGAAACGATCTCCATCGAAGGGGAAGGTCCTTTTGTCTGATTTGAGGGTTGCTGTGAAGGCGCAGGCGAGGGCTGATGGGTCTTTGGTTGAGGAGGTTAATGGGTCTTCGGTTGTGAATGGGTCTGTGATCGATGAGGCACTTGGGTCTTCTACTGTTTTGAAGAACTTACAGTCGGACAAAGTTAGGGCTGGTGCGTCTTCTGCGATCGTGGAGGAGGTACAGTCGGGCAAAGTTTCCATGGACAAGGAGTCGAGTCTATTGGCAGATCCGTTGAAGGTGATGATCGACAGCAAGTCTGATTCGTAGAGGCTGGTTTCTTCTTCGGCTAAGCTTCCGACGGTGGAGAAGACGGGTGCTGCGGCGTCTAGTTCTTCTTCCGTTTTACTGCCGCCGTTGGAGAAGAAGGGAGCTAGGGATCCGTCTTTCGTGCAAGCTGTGGCTAGGGCAAATTTGCTGCATGCTCGGGTGAGGGGAGGATTGGTGGATCAGGGTGGGCAGGTTGGATCGGGTATGGATCTTCAACCCGTGGAGCATGTGGTTAAGGGTCTGATTGGGCCTGGGCTTTCTAAGGAAGGGTTAGTTTCTAGTAAGGGTGAGGGCTTGAAGGCTGTTTCTTCAAGTGATTTGGGTTCTCAATCCATGCAGCATGGTAAAGTTCCGATTGGGCCTAGTGGACCTTCTAAGGATGAGGGGTCAGCTTCCACAATTGTCTCTCACTCCATGAAGCAAGTGGGTAGGGGCCGATTGGGGCTGTCACTAGTGGGCCAAGTGGGCTTGTGTCTAATAAGGGGGAGGGAAGGTCTTGGGCTGATTTATTTGGGGCGCCAAATTCAAATTCTTCTTCTACGTCCAAGCTTCAGTTTGTTCCACCTAAGGTGGTAAATGGTCGTTGGGTGGTGGTGCCTTCAGAGGATATTGTGAATGAGGGGATTAAATTGTGGCAGTGCTCACAGTTCCAAGCTTTCAAAAACCGAAACGGAACAAAGTTTGGACCATGTGTCGTCCAAACCACCTAAAGAATTCTCATTTGGCCGAACTTTGAGTTCCTAACTCTCCAAAACTCAAACGGAGCAAAGTTTGGACCAATTTCGTCCAAACCATATGAAAAACTGTCGTTGGGATGAACTTTGGGTTCCAAGCTCTCAAAAACCTAAGCAGAGCAAAGTTTGGACCATGTGTCGTCCAAACCACCTAAACAACTCTCATTGGGCTGAACTTTGAGTTCCTAACTCTCCAAAACCCAAACGGAGCAAAGTTTGGACCAAGTTCGTCCAAACCATATGTGTAAACCCGAGACTTCTCTAGGATCATTTTCTCTTGTCATCTATTGTGGTTTCATGGTTGAATTTAAGTTGTTGGGATTTACTAAGTTAAAAGAAGAAAGAAAAGAAAAGAAAAGGAAAAGGAAAAGGAAAATGGAAAAAAAAAAAAACAAATCACAAAGGGAAATGAAAAGAAAAAAAAAAAAAAAAAAAGAGAAAATGGGAATGGACAGCACAAACCCACCACCACCTAAGCCAACTCCTATCCATTTTCAGCCCACTTCCAGCCACATTCCTCATCATTTTCCTTCCAAATTTTCAGAGCACTTGAGGGAGAGAGTGAAGGAAGAAGAAGAAGAAGAATTTCGTGGTTTTGAGGTTGAAGAAGATAGGAAAAGCTCATGCAAAGCCAGCCATAGCAGAATCTGAGTTCAACCTGTCAACCTCTGGTTTTTTATTCGGTTTGAGCTACACAGAAGGAACTAAGAGGTTAGGTTTGATTTTATTGAAATTTAGTTCATTTTCTAAAAAATTTCATGAAGGAATCTTGAGTTAAATCATATGAGAAGTTAATGGTTTTTGGAATGGAAAACAGAGCACAGGATTTTCGAGCAAAGCAGGAGGATCTCTGGTGTTCTCTGGTGTTTTGAGCATTCTGGGGTGTACAAGTTGAATCAGAAGCTCTATTTGGTATGGTTGGAAAGCTTATTCAATTTCCTACAACTTTCATGAAGAATTCGTGAGCTCAAAATGACTTGAAGTAGGTTTAATTTCAGGAGGAAGATAAAGGGTAGCAGAAAACCTCGAATCTGTCTTGTCTGTGTTCGGGGCGTTTCTGGGCCAATTGGTTGAGAATCTCGTTTTCATTTCTTCAGGTACGTTGTAGAGTGTTCAAAAATGAAAAGTTTGATGTATAGTACATTAGTTTTGGTTAAGTATTGAGGAAGTTATGGGTGTCGGAAGGTGTGGTATTGAATCTGGAAAATCTGGAAAGTAGAATGTGGAGTTAGATTTCTTATTCAAGTGTTTAGAATTCATGAGCATGGATTGACAAAGCTAATTATGGTTCTAATGCTCGGTTTTGGTTGTTTGACAGGCCAAGAGGAAATAGGTCGGATCTACAAACCAGGGAACTAGCTAAGACTGTGAGTGACAAAATTAATTTCGAAAATTGTTTCCAATGGTTGTTCATGTTTAAATGTTTTACATGCTTTTCTATGAATGTTACATGGTTTTTATGAATGGTTTCAAGCTTAAGTTATGAGCTTAGATTTTTTTAATGAGGTTTATAAATGAGCATGTGATTATTGAGTTTTTGAAAAATAGTTGAAACGACATCCTTTTAAGCCAAGCATGTATTAGCAAGAATTATTTAAAGATTTTCGGTTTTTCCACGAGCAAGCTGAGTAAGCTTGAGTTTTACGAAAGATAACGATAAACAGGCATGTTTAAACGTTTTCATGTGATTTTTCTGAGATTTCTATTGACTACATGACTGAGATATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTTATATTCCGTTGTTGTCGTTGAGTGTACTCCGTGACAACGATGCTGTCGTGAGTGCTGGGCGGGCCCCACTACGACAAAGACGATGGGAGTGCTGGGCGGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTAGATCGGTCATGTTAGTTATAACGTTTGATGTACTTGATATGCCTTGCTAGATTTTTAATGACGAACTTGCGATGTTTTAAGAAAGCTTTTATCGTTGCACGTTTCTGTTTAACGCTTTGGTTGAGCAGCTTTATACGTTTAAAGTTTTATCACGTGTTCTGATTTCCGAATCTACAGTTTTAAATTTAGTCACTCACTGGGCTTCGTAGCTCATTCTTTCAAAATGTTTTCCCACTTTTTAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGATCAAGCTCCAGTACGTGGGTGGAGTTGTATATTGAGTCAGTCTATATTGTAAATGTTTTGTAAGGATTGAACAATTTAGTTCTAGAGGTTGTGGTTGTATAAACCCCATTTGTATATGTTTTTGGGTTGTGATATCTATATCAGGTTATTTTCCAAACCGAGTTATGTCAGGGTTGCACCTCGCGTATGTTAAAAGGTTTCCAGGGATTCCGCTGTGTTGTGTTTCATGTAGAATATTTTATATCTATGATTAGTATGTTTATCAGGTTCAATGTTTCAGGAGGGTCAACGGGTATCGTTAGAGGAGGACGATGTCCGTTGGCTTCACGCCATCTTCCGGGCTAAGCTAGCAGGTGGCCCAGGAGGGGGTGTGACAATATGA

mRNA sequence

ATGGGGAAGAAACGATCTCCATCGAAGGGGAAGGTCCTTTTGTCTGATTTGAGGGTTGCTGTGAAGGCGCAGGCGAGGGCTGATGGGTCTTTGGTTGAGGAGGTTAATGGGTCTTCGGTTGTGAATGGGTCTGTGATCGATGAGGCACTTGGGTCTTCTACTGTTTTGAAGAACTTACAGTCGGACAAAGTTAGGGCTGGTGCGTCTTCTGCGATCGTGGAGGAGAGGCTGGTTTCTTCTTCGGCTAAGCTTCCGACGGTGGAGAAGACGGGTGCTGCGGCGTCTAGTTCTTCTTCCGTTTTACTGCCGCCGTTGGAGAAGAAGGGAGCTAGGGATCCGTCTTTCGTGCAAGCTGTGGCTAGGGCAAATTTGCTGCATGCTCGGGTGAGGGGAGGATTGGTGGATCAGGGTGGGCAGGTTGGATCGGGTATGGATCTTCAACCCGTGGAGCATGTGGTTAAGGGTCTGATTGGGCCTGGGCTTTCTAAGGAAGGGTTAGTTTCTAGTAAGGGTGAGGGCTTGAAGGCTGTTTCTTCAAGTGATTTGGGTTCTCAATCCATGCAGCATGGTAAAGTTCCGATTGGGCCTAGTGGACCTTCTAAGGATGAGGGGTCAGCTTCCACAATTGTCTCTCACTCCATGAAGCAAGTGGGTAGGGGCCGATTGGGGCTGTCACTAGTGGGCCAAGTGGGCTTGTGTCTAATAAGGGGGAGGGAAGAGCACAGGATTTTCGAGCAAAGCAGGAGGATCTCTGGTGTTCTCTGGTGTTTTGAGCATTCTGGGGTGTACAAGTTGAATCAGAAGCTCTATTTGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGATCAAGCTCCAGTTCAATGTTTCAGGAGGGTCAACGGGTATCGTTAGAGGAGGACGATGTCCGTTGGCTTCACGCCATCTTCCGGGCTAAGCTAGCAGGTGGCCCAGGAGGGGGTGTGACAATATGA

Coding sequence (CDS)

ATGGGGAAGAAACGATCTCCATCGAAGGGGAAGGTCCTTTTGTCTGATTTGAGGGTTGCTGTGAAGGCGCAGGCGAGGGCTGATGGGTCTTTGGTTGAGGAGGTTAATGGGTCTTCGGTTGTGAATGGGTCTGTGATCGATGAGGCACTTGGGTCTTCTACTGTTTTGAAGAACTTACAGTCGGACAAAGTTAGGGCTGGTGCGTCTTCTGCGATCGTGGAGGAGAGGCTGGTTTCTTCTTCGGCTAAGCTTCCGACGGTGGAGAAGACGGGTGCTGCGGCGTCTAGTTCTTCTTCCGTTTTACTGCCGCCGTTGGAGAAGAAGGGAGCTAGGGATCCGTCTTTCGTGCAAGCTGTGGCTAGGGCAAATTTGCTGCATGCTCGGGTGAGGGGAGGATTGGTGGATCAGGGTGGGCAGGTTGGATCGGGTATGGATCTTCAACCCGTGGAGCATGTGGTTAAGGGTCTGATTGGGCCTGGGCTTTCTAAGGAAGGGTTAGTTTCTAGTAAGGGTGAGGGCTTGAAGGCTGTTTCTTCAAGTGATTTGGGTTCTCAATCCATGCAGCATGGTAAAGTTCCGATTGGGCCTAGTGGACCTTCTAAGGATGAGGGGTCAGCTTCCACAATTGTCTCTCACTCCATGAAGCAAGTGGGTAGGGGCCGATTGGGGCTGTCACTAGTGGGCCAAGTGGGCTTGTGTCTAATAAGGGGGAGGGAAGAGCACAGGATTTTCGAGCAAAGCAGGAGGATCTCTGGTGTTCTCTGGTGTTTTGAGCATTCTGGGGTGTACAAGTTGAATCAGAAGCTCTATTTGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGATCAAGCTCCAGTTCAATGTTTCAGGAGGGTCAACGGGTATCGTTAGAGGAGGACGATGTCCGTTGGCTTCACGCCATCTTCCGGGCTAAGCTAGCAGGTGGCCCAGGAGGGGGTGTGACAATATGA

Protein sequence

MGKKRSPSKGKVLLSDLRVAVKAQARADGSLVEEVNGSSVVNGSVIDEALGSSTVLKNLQSDKVRAGASSAIVEERLVSSSAKLPTVEKTGAAASSSSSVLLPPLEKKGARDPSFVQAVARANLLHARVRGGLVDQGGQVGSGMDLQPVEHVVKGLIGPGLSKEGLVSSKGEGLKAVSSSDLGSQSMQHGKVPIGPSGPSKDEGSASTIVSHSMKQVGRGRLGLSLVGQVGLCLIRGREEHRIFEQSRRISGVLWCFEHSGVYKLNQKLYLVEIELPVPDTLPTSAESSRSSSSSMFQEGQRVSLEEDDVRWLHAIFRAKLAGGPGGGVTI
Homology
[Close]
BLAST of Spg030996 vs. NCBI nr
Match: KAA0037787.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK27310.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 78.2 bits (191), Expect = 1.5e-10
Identity = 43/70 (61.43%), Postives = 48/70 (68.57%), Query Frame = 0 

Query: 262 VYKLNQKLYLVEIELPVPDTLPTSAESSRSSSSSMFQEGQRVSLEEDDVRWLHAIFRAKL 321
           V+KLNQKLYLVEIELPV DTLPTSAESS S+S S         +  DDV WL  +FRAK 
Sbjct: 43  VHKLNQKLYLVEIELPVLDTLPTSAESSGSNSRS------AGIVRGDDVCWLQVVFRAKT 102

Query: 322 AGGPGGGVTI 332
            GGPGG   +
Sbjct: 103 TGGPGGASVV 106

[Close]
BLAST of Spg030996 vs. NCBI nr
Match: TYK27998.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 77.4 bits (189), Expect = 2.6e-10
Identity = 43/69 (62.32%), Postives = 50/69 (72.46%), Query Frame = 0 

Query: 271 LVEIELPVPDTLPTSAESSRSSSSS---MFQEGQRVSL-------EEDDVRWLHAIFRAK 330
           +VEIELPVPDTLPTSAESS S+SS+   ++ E   V +        EDDV WLHA+FRAK
Sbjct: 33  VVEIELPVPDTLPTSAESSESNSSTWLELYVEFVHVEMFWLAGIVREDDVCWLHAVFRAK 92

[Close]
BLAST of Spg030996 vs. NCBI nr
Match: KAA0066851.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 77.4 bits (189), Expect = 2.6e-10
Identity = 43/69 (62.32%), Postives = 50/69 (72.46%), Query Frame = 0 

Query: 271 LVEIELPVPDTLPTSAESSRSSSSS---MFQEGQRVSL-------EEDDVRWLHAIFRAK 330
           +VEIELPVPDTLPTSAESS S+SS+   ++ E   V +        EDDV WLHA+FRAK
Sbjct: 33  VVEIELPVPDTLPTSAESSESNSSTWLELYVEFVHVEMFWLAGIVREDDVCWLHAVFRAK 92

[Close]
BLAST of Spg030996 vs. NCBI nr
Match: KAA0060199.1 (uncharacterized protein E6C27_scaffold386G00120 [Cucumis melo var. makuwa] >TYJ95571.1 uncharacterized protein E5676_scaffold767G00770 [Cucumis melo var. makuwa])

HSP 1 Score: 76.6 bits (187), Expect = 4.4e-10
Identity = 47/99 (47.47%), Postives = 57/99 (57.58%), Query Frame = 0 

Query: 232 LCLIRGREEHRIFEQSRRISGVLWCFEHSGVYKLNQKLYLVEIELPVPDTLPTSAESSRS 291
           L L+R R      +  +    V++      V + N    +VEIELPVPDTLPTSAES  S
Sbjct: 50  LYLVRPRGNRPSLQTGKLDKTVIFSLSTLSVLRDNDA--VVEIELPVPDTLPTSAESFES 109

Query: 292 SSSSMFQEGQRVSLEEDDVRWLHAIFRAKLAGGPGGGVT 331
           +S S         +  DDV WLHA+FRAK AGGPGGGVT
Sbjct: 110 NSRS------TGIVRGDDVCWLHAVFRAKTAGGPGGGVT 140

[Close]
BLAST of Spg030996 vs. NCBI nr
Match: KAA0042466.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK22910.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 74.7 bits (182), Expect = 1.7e-09
Identity = 40/61 (65.57%), Postives = 45/61 (73.77%), Query Frame = 0 

Query: 270 YLVEIELPVPDTLPTSAESSRSSSSSMFQEGQRVSLEEDDVRWLHAIFRAKLAGGPGGGV 329
           +LV IELPVPDTLPTSAESSRS+S S+        +  DDV WLHA+FRAK  GGPGG V
Sbjct: 5   FLVVIELPVPDTLPTSAESSRSNSRSV------GIVRGDDVCWLHAVFRAKTVGGPGGDV 59

Query: 330 T 331
           T
Sbjct: 65  T 59

[Close]
BLAST of Spg030996 vs. ExPASy TrEMBL
Match: A0A5D3DVK1 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1784G00240 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 7.3e-11
Identity = 43/70 (61.43%), Postives = 48/70 (68.57%), Query Frame = 0 

Query: 262 VYKLNQKLYLVEIELPVPDTLPTSAESSRSSSSSMFQEGQRVSLEEDDVRWLHAIFRAKL 321
           V+KLNQKLYLVEIELPV DTLPTSAESS S+S S         +  DDV WL  +FRAK 
Sbjct: 43  VHKLNQKLYLVEIELPVLDTLPTSAESSGSNSRS------AGIVRGDDVCWLQVVFRAKT 102

Query: 322 AGGPGGGVTI 332
            GGPGG   +
Sbjct: 103 TGGPGGASVV 106

[Close]
BLAST of Spg030996 vs. ExPASy TrEMBL
Match: A0A5D3DX39 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G002140 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.2e-10
Identity = 43/69 (62.32%), Postives = 50/69 (72.46%), Query Frame = 0 

Query: 271 LVEIELPVPDTLPTSAESSRSSSSS---MFQEGQRVSL-------EEDDVRWLHAIFRAK 330
           +VEIELPVPDTLPTSAESS S+SS+   ++ E   V +        EDDV WLHA+FRAK
Sbjct: 33  VVEIELPVPDTLPTSAESSESNSSTWLELYVEFVHVEMFWLAGIVREDDVCWLHAVFRAK 92

[Close]
BLAST of Spg030996 vs. ExPASy TrEMBL
Match: A0A5A7VMG9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold271G002220 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.2e-10
Identity = 43/69 (62.32%), Postives = 50/69 (72.46%), Query Frame = 0 

Query: 271 LVEIELPVPDTLPTSAESSRSSSSS---MFQEGQRVSL-------EEDDVRWLHAIFRAK 330
           +VEIELPVPDTLPTSAESS S+SS+   ++ E   V +        EDDV WLHA+FRAK
Sbjct: 33  VVEIELPVPDTLPTSAESSESNSSTWLELYVEFVHVEMFWLAGIVREDDVCWLHAVFRAK 92

[Close]
BLAST of Spg030996 vs. ExPASy TrEMBL
Match: A0A5D3BAD1 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold767G00770 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.1e-10
Identity = 47/99 (47.47%), Postives = 57/99 (57.58%), Query Frame = 0 

Query: 232 LCLIRGREEHRIFEQSRRISGVLWCFEHSGVYKLNQKLYLVEIELPVPDTLPTSAESSRS 291
           L L+R R      +  +    V++      V + N    +VEIELPVPDTLPTSAES  S
Sbjct: 50  LYLVRPRGNRPSLQTGKLDKTVIFSLSTLSVLRDNDA--VVEIELPVPDTLPTSAESFES 109

Query: 292 SSSSMFQEGQRVSLEEDDVRWLHAIFRAKLAGGPGGGVT 331
           +S S         +  DDV WLHA+FRAK AGGPGGGVT
Sbjct: 110 NSRS------TGIVRGDDVCWLHAVFRAKTAGGPGGGVT 140

[Close]
BLAST of Spg030996 vs. ExPASy TrEMBL
Match: A0A5A7TKJ1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold334G00510 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 8.0e-10
Identity = 40/61 (65.57%), Postives = 45/61 (73.77%), Query Frame = 0 

Query: 270 YLVEIELPVPDTLPTSAESSRSSSSSMFQEGQRVSLEEDDVRWLHAIFRAKLAGGPGGGV 329
           +LV IELPVPDTLPTSAESSRS+S S+        +  DDV WLHA+FRAK  GGPGG V
Sbjct: 5   FLVVIELPVPDTLPTSAESSRSNSRSV------GIVRGDDVCWLHAVFRAKTVGGPGGDV 59

Query: 330 T 331
           T
Sbjct: 65  T 59

The following BLAST results are available for this feature:
BLAST of Spg030996 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0037787.11.5e-1061.43ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK27310.1 ty3-gyp... [more]
TYK27998.12.6e-1062.32reverse transcriptase [Cucumis melo var. makuwa][more]
KAA0066851.12.6e-1062.32reverse transcriptase [Cucumis melo var. makuwa][more]
KAA0060199.14.4e-1047.47uncharacterized protein E6C27_scaffold386G00120 [Cucumis melo var. makuwa] >TYJ9... [more]
KAA0042466.11.7e-0965.57retrotransposon protein [Cucumis melo var. makuwa] >TYK22910.1 retrotransposon p... [more]
BLAST of Spg030996 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg030996 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DVK17.3e-1161.43Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5D3DX391.2e-1062.32Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold38... [more]
A0A5A7VMG91.2e-1062.32Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold27... [more]
A0A5D3BAD12.1e-1047.47Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A5A7TKJ18.0e-1065.57Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of Spg030996 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..102
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 176..206
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..108
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 176..191

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg030996.1Spg030996.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006259 DNA metabolic process
molecular_function GO:0005488 binding
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0016779 nucleotidyltransferase activity