Spg030529 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg030529
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold6: 32248873 .. 32250457 (+)
RNA-Seq Expression	Spg030529
Synteny	Spg030529

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCCCCATCATCACCGAAGCCCTACGACAAACTGCCAACAAGCCAAAGAGGGTAATGTTCTATCCATACATGGTCACGAAGCTCTGCCATCAGTCCGGAGTGGTGCCTACTCCTGCTGAAGAAAGAAGACAAATTAGTCAAACCTTTGACGATGCGGATCACTCAGGCCCACAATAGCCGAATCCTTACCGCGCCAGCAAAAAATCAAGAAACTGCTCCTGCAACAGAAGAGCGGTTGCCAGCGCCTGAGCCCTAAAGAAAGAAGCAGAAGAAGCAGACTGCGGGCCAGAATTCAAGACCTGCGGCAAGGCTAGTGCAAGATATGATCCCCAGCAGCCCCCTAGCGTAGGAAACCATTGTCTGCACTGAGAATCAGCAAGCCTCGTCACCGCATCCAGACTTGCCCCCGCGCCAGCCTTTTGAGCTAGATGAGCGCCTGGAGAATGTGCATCGAGTGGAGGATTGCGATCAGCAGACCATAGCAGAAGATCTCCAGCGCCCTCGCGAGCAAGTCTCTGTGCCGTCTGACCAGCCGCCGCGTGTCGATCCCACAACAAGTTCCTCTACGACGCCCCCGCAATTCATTGATGTAGATGTTGGGCATGTTTATGTAGAGATGCGACGCCACTTGGAGGAAATTGTGGAGCCCTTGAGAAGAGAGCAGGCAGAGCTGAGCAAGCGCCTTGACTCTTTCATGCTCTACTTGGTGCGCTGGACCAACACTTTCGGTCGTCTGCCCCTTGCGCCAGTAGATCTGTTTGTCCGCCCTCGCCCGCAACCAAGGCCAGATGGTGCAGGGCCTTCTCAAGTGTGCCCCAGCATGCCTCCTTCGCCGCCTAGATCGCCGCCCCAGACACCGCCAACGGAGTGATTTTCCTGCTTTTTCATTTCATGTCCCTTGTATTTTTTTTGTGTTGATTTTGTAATGCGTTTGCTAAATGTATTATCTTTGCCGCATTAATGAATTCAATATTTTGGGCAATTATCGCATTCACCAGTCGCACCTTTAATAAAATGTCTTCATCCTCAAATGTCTCTGCGTTAGCTCTTAGGATAAGTTCTTAGCATCTTCAGCACTGAGAATCAGCAAGCCTTGTCGCCGCATCCAGACTTGCCCCCGCGCCAGCCTTTTGAGCCAGATGAGTGCCTGGAGAATGTGCATCGAGTGGAGGACTGCGATCAGCAGACCATAGCAGAAGATCTCCAGCGCCCTCGCGAGCAAGTCTCTACGCCATCTAACCAGCCTCCGCGTGTCGATCCCACAACAAGTTCCTCTACGACGCCCCTGCAATTCATTGATGTAGATGTTGGGCATGTTTATGTAGAGATGCGACGCCACTTGGAGGAAATTGTGGAGCCCTTGAGAAGAGAGCAGGCAGAGCTGAGCAAGCGCCTTGACTCTCTCATGCTCTACTTGGTGCGCTGGACCAACACTTTCGGTCGTCTGCCCCTTACGCCAGTAGATCTGTTTGTCCGCCCTCGCCCGCAACCAAGGCCAGATGGTGCATGGCCTTCTCAAGTGTGCCCCAGCATGCCTCCTTCGCCGCCTAGATCGCCGCCCCAGACACCACCAAGGGAGTGA

mRNA sequence

ATGGGCCCCATCATCACCGAAGCCCTACGACAAACTGCCAACAAGCCAAAGAGGGAAACCATTGTCTGCACTGAGAATCAGCAAGCCTCGTCACCGCATCCAGACTTGCCCCCGCGCCAGCCTTTTGAGCTAGATGAGCGCCTGGAGAATGTGCATCGAGTGGAGGATTGCGATCAGCAGACCATAGCAGAAGATCTCCAGCGCCCTCGCGAGCAAGTCTCTGTGCCGTCTGACCAGCCGCCGCGTGTCGATCCCACAACAAGTTCCTCTACGACGCCCCCGCAATTCATTGATGTAGATGTTGGGCATGTTTATGTAGAGATGCGACGCCACTTGGAGGAAATTGTGGAGCCCTTGAGAAGAGAGCAGGCAGAGCTGAGCAAGCGCCTTGACTCTTTCATGCTCTACTTGGTGCGCTGGACCAACACTTTCGGTCGTCTGCCCCTTGCGCCAGTAGATCTGTTTGTCCGCCCTCGCCCGCAACCAAGGCCAGATGGTGCAGGGCCTTCTCAAGTGTGCCCCAGCATGCCTCCTTCGCCGCCTAGATCGCCGCCCCAGACACCGCCAACGGACACTGAGAATCAGCAAGCCTTGTCGCCGCATCCAGACTTGCCCCCGCGCCAGCCTTTTGAGCCAGATGAGTGCCTGGAGAATGTGCATCGAGTGGAGGACTGCGATCAGCAGACCATAGCAGAAGATCTCCAGCGCCCTCGCGAGCAAGTCTCTACGCCATCTAACCAGCCTCCGCGTGTCGATCCCACAACAAGTTCCTCTACGACGCCCCTGCAATTCATTGATGTAGATGTTGGGCATGTTTATGTAGAGATGCGACGCCACTTGGAGGAAATTGTGGAGCCCTTGAGAAGAGAGCAGGCAGAGCTGAGCAAGCGCCTTGACTCTCTCATGCTCTACTTGGTGCGCTGGACCAACACTTTCGGTCGTCTGCCCCTTACGCCAGTAGATCTGTTTGTCCGCCCTCGCCCGCAACCAAGGCCAGATGGTGCATGGCCTTCTCAAGTGTGCCCCAGCATGCCTCCTTCGCCGCCTAGATCGCCGCCCCAGACACCACCAAGGGAGTGA

Coding sequence (CDS)

ATGGGCCCCATCATCACCGAAGCCCTACGACAAACTGCCAACAAGCCAAAGAGGGAAACCATTGTCTGCACTGAGAATCAGCAAGCCTCGTCACCGCATCCAGACTTGCCCCCGCGCCAGCCTTTTGAGCTAGATGAGCGCCTGGAGAATGTGCATCGAGTGGAGGATTGCGATCAGCAGACCATAGCAGAAGATCTCCAGCGCCCTCGCGAGCAAGTCTCTGTGCCGTCTGACCAGCCGCCGCGTGTCGATCCCACAACAAGTTCCTCTACGACGCCCCCGCAATTCATTGATGTAGATGTTGGGCATGTTTATGTAGAGATGCGACGCCACTTGGAGGAAATTGTGGAGCCCTTGAGAAGAGAGCAGGCAGAGCTGAGCAAGCGCCTTGACTCTTTCATGCTCTACTTGGTGCGCTGGACCAACACTTTCGGTCGTCTGCCCCTTGCGCCAGTAGATCTGTTTGTCCGCCCTCGCCCGCAACCAAGGCCAGATGGTGCAGGGCCTTCTCAAGTGTGCCCCAGCATGCCTCCTTCGCCGCCTAGATCGCCGCCCCAGACACCGCCAACGGACACTGAGAATCAGCAAGCCTTGTCGCCGCATCCAGACTTGCCCCCGCGCCAGCCTTTTGAGCCAGATGAGTGCCTGGAGAATGTGCATCGAGTGGAGGACTGCGATCAGCAGACCATAGCAGAAGATCTCCAGCGCCCTCGCGAGCAAGTCTCTACGCCATCTAACCAGCCTCCGCGTGTCGATCCCACAACAAGTTCCTCTACGACGCCCCTGCAATTCATTGATGTAGATGTTGGGCATGTTTATGTAGAGATGCGACGCCACTTGGAGGAAATTGTGGAGCCCTTGAGAAGAGAGCAGGCAGAGCTGAGCAAGCGCCTTGACTCTCTCATGCTCTACTTGGTGCGCTGGACCAACACTTTCGGTCGTCTGCCCCTTACGCCAGTAGATCTGTTTGTCCGCCCTCGCCCGCAACCAAGGCCAGATGGTGCATGGCCTTCTCAAGTGTGCCCCAGCATGCCTCCTTCGCCGCCTAGATCGCCGCCCCAGACACCACCAAGGGAGTGA

Protein sequence

MGPIITEALRQTANKPKRETIVCTENQQASSPHPDLPPRQPFELDERLENVHRVEDCDQQTIAEDLQRPREQVSVPSDQPPRVDPTTSSSTTPPQFIDVDVGHVYVEMRRHLEEIVEPLRREQAELSKRLDSFMLYLVRWTNTFGRLPLAPVDLFVRPRPQPRPDGAGPSQVCPSMPPSPPRSPPQTPPTDTENQQALSPHPDLPPRQPFEPDECLENVHRVEDCDQQTIAEDLQRPREQVSTPSNQPPRVDPTTSSSTTPLQFIDVDVGHVYVEMRRHLEEIVEPLRREQAELSKRLDSLMLYLVRWTNTFGRLPLTPVDLFVRPRPQPRPDGAWPSQVCPSMPPSPPRSPPQTPPRE

Homology

The following BLAST results are available for this feature:

BLAST of Spg030529 vs.


Match Name	E-value	Identity	Description

BLAST of Spg030529 vs.


Match Name	E-value	Identity	Description

BLAST of Spg030529 vs.


Match Name	E-value	Identity	Description

BLAST of Spg030529 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 158..212
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..96
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 234..261
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 325..359
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 230..261
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 158..188
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..96

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg030529.1	Spg030529.1	mRNA