Spg030227 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg030227
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Pentatricopeptide repeat-containing protein
Location	scaffold6: 14910319 .. 14916489 (-)
RNA-Seq Expression	Spg030227
Synteny	Spg030227

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGATAAGAGGAATCAGTCATGATGTTGTCTCATATGCAAGTATCATTTCTGGTTACTCAAAAGCTCGCAACCTTTATAAGGTACTCAGGCTTTTTGACAATATGAAGCAAATTAAAATAGACCCTAATAGGAAAGTCTACAATGCAGTCATTCATGCTCTTGCCAAAAGTGGGCTTTTGAAAGAAGCTAAAAATCTCATAAAAACGATGGAAGAGAAGGGGATTATTGCAAATGCTGTTACTTATAACTCAATTGTAAAGCCTTTATGCAAGGCCCGAAAATTTGATGAAGCTAGAGCAATTTTTTATGTGCTCTTGCAGCGAGGAGTTTGCCCAACAATCTAGACTTATCATGCCTTCTTGAGATTCCTGAGAACGGAGGAAGAAATATTTGAGCTATTAGAGAAGATGAGAACAATGGGGTGCAATCCAACTACTGAAACCTATATAATGTTAATCAGAAAATTTTGTCAATGGCGCCAGCTTGATAATGTTTCCAAAATATGGCATGAAATGAGTGAAAATGGAATTAGTCCTAATCGCAGCTCTTATATTGTCTTAATACATGGTCTCTTCTTGAATGGAAACTTAGAAGATGCATACAAATACTATCTAGAAATGAAGGAAAAAGAGTTACTTCCTGAACCAAAGATAGATGAGGTACTTCAAGCTTGGCTTGTTGGTAAGCCAATGATTCAAGGTCATATGCATGGTTTATCGGAGAACCAATCAAATTGTTTGGGAGAAGCCAAGAACTCCAGATTGTTCCCCAAAAAAATTGATTTGAAAATTGATTTTCACCGACAACCTGAGATTAGAAATGTTTCAAGAGATTATGGTTTTTCATTTGGGAAGCAGTAGGATTCTGAAGTATATCTTATCACATGAACCTTCAGTACCAAATGGCTTGTTGGGTCTTTCAGGTGCATGACATCAACCGTTCATTTGAGGTTTGGCAATTCAAAATCTTTTCTATTACATAATCAATGCTTTTATGCAATTCAAGTGCTGATGAGGACCGTTGATAGTAGAAGATGTAACTTTTGACTACTTTTTATCTTATTTGGTCTCAACTTTATCTTTGACATTGCCACAAGTTAAATAAAACCAGTCATTATGCTTGTAACAAGGAAGTAATAAACTACATACTATTCTATTGGTGCACATGTAACATGGAACAACAAGTCATAAAACGAGCTTCTACTTGTACAACAACTAAGAAGAATTCCTAAGGACATGGTTCAAACTAGTCATTATTTGCTGTGCAGTGTGCACTAGGCTCAACTCTAGGTTTTGGAGATTCATCAGAAAACACTTCTGATAAAGTAATAACGTATATAGATTGACAAAGAATACAAATAAAAATGGCAATGCTCTTCACATGTCGAAGGCATCAAAGCAATTGTAACGAAATTACTTGATGTCATTCTACTTTTACTTGAGATGGTTCTATAACGCCGACAAATTAAGGTAAAACTCGTTTCTTGTTCTAATTTTGAGTATTTTGGGTTAAGTTTCGAGTTTTGGTGATTATATGTTTCTAATTAATGGGTTTCTTAATTGGATTAAGCTGAGGACATTTCTGTAAAAATACTGAAGTGGTGTAGCCCTAAATCCGTATTTTTCTTCCTCCTTCACGTGGACTATCTCCCAGCCGCCATCTGCTTTTTTTTTTTTTTCTCTTCTTCTTCGTTGAACGCCAGCCGCCCGTCTACTCCTTTTTCTTCTTCTTCGTTGAACGCCAGTAGCCCCACTCCTCCAGCACCTCCACCCCTCGTTCTCGGCGCCGGCGTTGGTCACTCTCCGGCGAGTTCGGGACCACGACGGCGGCAGCAGTTGGGCAGTCTGTTTCCAGCGAGTTTTGGCGCGATTTAAAGGTTGTTTTCGTCTCTCTCTTGCCCGATCTCCCCCTTAAACGTTCGCTCCCTCACTTCCAGTCCCTCTTATCTCTGTTTTCGAACTTATTGCAGTGTGGTGGTGGTCGAACAACAACGTTTTCCGACGGCGTTTCCATTAGGCGCGATTTGCAGCTTGTGGGTCTGTTTTTGGGCATTTTTCCAGCGTGTTGTCTATTGGGTAAGCGTTTAGAAGCTTCTTCTTGGTTGATTTTTGAGTTTTATCGATTACCCATTCGTTATTCTTTCCGTTTAGCGAGCATTCTCTTCGTATATGGCATTTTGAGTGTTGGACCTCCAAGTTTCTGCAGTTTAGGAGCGTGTTCGCTTTGGTTAAGTGAATTTAGTCAAGCATTTGGTGGTTTATTTGTATTAAAAGGATACCCATTGATATTGGCTTTTTGTTTCAAGGTGCCCATTGCGTTCGGTTGTCAAATTGCCTATCTTAGGTGGAGTTGTGAGCTTGGACAGCAAACTTTGTTGCTGTTTAGGTGAGTTTTCGAGGGTTAAATCATTCCCGTATTTAGTTGACTCCTTATGCCCTCTTGGTTTAATCTAGTTTATGAGTTAAGATTATTTTTCCCCTTTATGTTTAATTGTTTAGGGACTTGGAAGCTAAGGAGTTTATTTGTTTTGCCAAGCAAACTTAATAGCTAAGGTAAGTAGCTATTGGATTTCAGTTTCAAGCTTAGCCCCATAGCATGTTTGTTGGAATTGATAAATGACTAGTCTGAAGCTTGGATTAGTTTCTTTTGAGAATTGGCATGCTAGCATGAGTTAGTTGTGTGCCTTTAAATTGTCCTTGGATTTTGATGAGCATGATAGTTCGTTTAAGCATGTTGTGGAAAGCTGTGTTCTTTCTAGTTATGGAATATATTTGGTTCTGCTTCTGGATGAATTAGAACTTTTCTTTTAAAGTTATCTTGGGAGCATGATTAGATCGTATGGTTGATTGCCCTGCATGTCTGATTGGTGGTGGTGGCTCATTGTATTCTGGAGTTGTTGTTGAGCCGTACCCATTATGGGAGTGTTTTGTTTGCTCTTTCAGGTGTCAGGAAATTTTTGGATTTTTCTTACGTATGTTGTTATGCTGCCGAATTTTCGGTAGCACAATGGCAAGAGTGGGACTAAGCTTAGTAGAACCTTCTCTGATTAGACTAAGCTTAGTAGGATCCTTCGATACGTTACGCTCGATAGTCGTACGTATGAAAAGGGCAAGGCCTAGAATAGGAGCCTTAGATGTGATTCAGGGTCACATATAGACTTAGCAGATCGTTAAGCCTTATGTCTAGCTAGGTTCGTTTCCTTCCCCATCTTAGGATACTGATGGATACTACCTACAGGCACGAGATCGTGCACCCTATCAGTGACTGATAGAGCTTACTTCTTTGGCACGAGATCGTGCATTCCATCAGGACGGTGTCGAGCTAGGCACAGGATTGTGCGCCAGATGGTATTCGGGCATGCTTCATGCCCAGATTGCTCCACTGTAATTTATACTCATGTTGTAACCCGAAAACCGTTTGTACTTTTGAAGGATAGTCAAGGAAGACACATTGCGAAGTTTTTGGTTGGAGTCTATGAGAGTTAGATGGTGTTTTGGGCAACGAGGTGAAGTTTTGAAGTCTGGAGTTGTGAAGTTTGGGGAGTTATGAAGTCTGTGTTTAGAGTGCAGAGTTGTTAAGTCTAGAGTTATGAAGTCTGTGTTTGGGGAGCAGACTTGTGAAGGTTTGTGTTTATGTTCGTTTTTTTCTAAATTTTTTCTAATTGAATTAATAAAAATGTTTTTCCATCGAGAGCACATACCAAAACTGAAATCCTCTAGGGAGATAAAACTAGCTCTAGGAAATTGATAATGCATATTGAAGTTTGAATAACACGGAATACATTCTTTATTTTGGTGTTGGTTTAATTTCACTTGGGTTAGTGATTCACATTTTTAAATATAAAAATATCTTTAAACTATTTAAAACTTATCTAGTTTGTGGAGTTATTTAAAAAGTTATTGTAAGTTTCCTTGCTTTTTAAATTGTTGGGTGCAAATTGACATGGTTTTGGTTAGACTTTGGTTAAAATTAGATTTTCTTTCCTCCTGTACGTTGCATTTTTCTTTCTAAAAAGTGGTTAGGGGCAATTTCGTTTATTTTAATTAGAAATTTATTAATTAAAATCACGTTTAGTAATTTATTTAATTTATAAACATGTTTAGCCATTTTTCAAATTCCTCCTATTAAATCTAGTCTTGTCCCATTTCCTAGTGCGTTTGAACGTAGGCGGGCTATAAGGCCCAATAGAGCCAGAGGCCCATCTAATTTTCATGGGTCAACAAATAGCCCAAATACATAATTGCTGTCGTTCAAATTCAACTACAGTAGCTTCTGGCAGACATTTGTTGGGGAGGCTTCTTGCTTTTTTCGTCTTAGGGTTTTCGATGTCGATCTCCGCAGCTCTCATCTCTCGGCGATGGCGAAGAACAGGAATAAGAAGAAGCGAAGTGGGGCTATGTCTATGGACATAACCGAAAATACCGTTAATGAGCTCCCTCAAGGTACATTTGAGTTATCTGAAAAGGGATTAAACAGAATAGTATCAGATAGAATGAAAACTGTATCCTCCAGATGTTTTTACTTGTCGTTCCTTTTTCATTGGTTCTCTTTAAGATGTTTTAGAACTCTTCTTTGTTTTAATATTTGTTTTCTTTTGAGAAGTTTTGAGGTTAAACTAACTTATTTTCCACTTGAATCTATAGCGATGGACGTGTCTGAGTCTGCAGTTCATAAACCAGCTTCTGGCGCTCCCAATCTGTAAGCTTCCACCTGGGAATTATGGTTAATTTTTTAATTTTATGGTTTGGGACATAGTTCCAAGCCAATTCATTGTGCGCTTTTGCTTTTGCTTTTGTTTTTTTTTTTTTTTTTTGTTTTTGTTACAATTCTTGTGTTATCAGTTACCGACTTTAGATTCATTGGCTTTGTTCAATTTGTTGTGTATAAAAAACAGTTAGATTGGGATATCATTATCTCACATGACTAAGCCTTTATCCCAAATTTGTTCATTTTGGTATGAGGCTGAGAAAATTAGGGCAAAAATTATAATGGACATAACTTTAGATTAGAGTAAATTGAGCATTGTATGTATTTATGATCTTACCACAAAAGGTGAACTAACTCCAAGGATTTTTTTTTTCATATTTAGCCATATTACTGTTGATTTTATAAGTGTATTTAGTGGGTCACATATAAGTTTAAGTGCTAGTTACATGGCTAAAAATTGGTGACAACAGTGCGAGAAATATTTCTTGAAGGAGGTAAATGAGGAAAGACTATCAATGCTCTATCTTCATAATCTGTGTTCAACTTTTTTAATTGTGAGAAAAGCATCTTCTAATCGGAAATTCATTGGAATTCATTGGAAATTCATAGCATCTTGATAAATTATGCCTTTCTTCTCACCAATTGTGTATGTTTTTTACCTGAGTGTAGATTGTTTCTCATTTATTATATTTTGAAATGGCACCATGATAAATATTATACACAATAGAGGAGAAGTACTTAGCTCTTGTATTCCTTCAGGAACATTTCATTTATTACTGTAGTAAGAAGCATATTATGCACCTCTCTTATTCGTTTCTAGTCACTTGAACTTATCTATAAAGGCAAAAATAAAACCAGAAAAGAATATCAAGTGGCAACAGTAAATCATAAATGGAAGGAGTGACAAAACTTTCCTATTACCTCTGAACGCCTGCTATTATCAAGTGCCCAATCTTTTCTTATTCGTTTCCTATTATCAAGTGCCCAATCTTTATCTTTCCTGTATTGGTAACATGTCAAATGGTCCGAGAGCTTCACCTCTGAACGCCTGCTATATTGGAATTTGATCTAGAATTTACTGAATCCCAGGCATTGCCTCTGGAGATGGTTGAATAGTAATATTATTCAAATAAGAAATTTTCTGGGGTTTGATTGTCTTTGTCTCTCAATCTCCCTTTCGAATGCTCGCGAATCCATTGTATAATGTTAGTTGCTTTACTAAATTTGGTTTTTACTTAATTCTAAGCTGCCTTCTTTCTGTTTCACCCACAACTTCTGATCATTACTCTTTGTTTGACAGAAAGTTGAAAAAGAGAAGACCAATGAAGCGATCAAAGAATGTTAGGAATACAAAAGCCATGGCGAAGGCCATATCCAAGGGCGAGCAGACAACCGAGAAAATATTGAAAAATCAGAGCAAAATTATCAGAATACAATCTGCAAAAACATTGTATGAATGA

mRNA sequence

ATGACGATAAGAGGAATCAGTCATGATGTTGTCTCATATGCAAGTATCATTTCTGGTTACTCAAAAGCTCGCAACCTTTATAAGGTACTCAGGCTTTTTGACAATATGAAGCAAATTAAAATAGACCCTAATAGGAAAGTCTACAATGCAGTCATTCATGCTCTTGCCAAAAGTGGGCTTTTGAAAGAAGCTAAAAATCTCATAAAAACGATGGAAGAGAAGGGGATTATTGCAAATGCTGTTACTTATAACTCAATTGTAAAGCCTTTATGCAAGGCCCGAAAATTTGATGAAGCTAGAGCAATTTTTTATGTGCTCTTGCAGCGAGGACTTGATAATGTTTCCAAAATATGGCATGAAATGAGTGAAAATGGAATTAGTCCTAATCGCAGCTCTTATATTGTCTTAATACATGGTCTCTTCTTGAATGGAAACTTAGAAGATGCATACAAATACTATCTAGAAATGAAGGAAAAAGAGTTACTTCCTGAACCAAAGATAGATGAGGTGCATGACATCAACCGTTCATTTGAGTGTGCACTAGGCTCAACTCTAGGTTTTGGAGATTCATCAGAAAACACTTCTGATAAATGTGGTGGTGGTCGAACAACAACGTTTTCCGACGGCGTTTCCATTAGGCGCGATTTGCAGCTTGTGGGTCTGTTTTTGGGCATTTTTCCAGCGTGTTGTCTATTGGGTAAGCGTTTAGAAGCTTCTTCTTGGTTGATTTTTGAGTTTTATCGATTACCCATTCGTTATTCTTTCCGTTTAGCGAGCATTCTCTTCGTATATGGCATTTTGAGTGTTGGACCTCCAAGTTTCTGCAGTTTAGGAGCGTGTTCGCTTTGGTGCCCATTGCGTTCGGTTGTCAAATTGCCTATCTTAGGTGGAGTTGTGAGCTTGGACAGCAAACTTTGTTGCTGTTTAGATCGTATGGTTGATTGCCCTGCATGTCTGATTGGTGGTGGTGGCTCATTGTATTCTGGAGTTGTTGTTGAGCCGTACCCATTATGGGAGTGTTTTGTTTGCTCTTTCAGGTGTCAGGAAATTTTTGGATTTTTCTTACGTATGTTGTTATGCTGCCGAATTTTCGGTAGCACAATGGCAAGAGTGGGACTAAGCTTAGTAGAACCTTCTCTGATTAGACTAAGCTTAGTAGGATCCTTCGATACGTTACGCTCGATAGTCGTACGCACGAGATCGTGCACCCTATCAGTGACTGATAGAGCTTACTTCTTTGGCACGAGATCGTGCATTCCATCAGGACGGTGTCGAGCTAGGCACAGGATTGTGCGCCAGATGACATTTGTTGGGGAGGCTTCTTGCTTTTTTCGTCTTAGGGTTTTCGATGTCGATCTCCGCAGCTCTCATCTCTCGGCGATGGCGAAGAACAGGAATAAGAAGAAGCGAAGTGGGGCTATGTCTATGGACATAACCGAAAATACCGTTAATGAGCTCCCTCAAGCGATGGACGTGTCTGAGTCTGCAGTTCATAAACCAGCTTCTGGCGCTCCCAATCTCTGCCTTCTTTCTGTTTCACCCACAACTTCTGATCATTACTCTTTGTTTGACAGAAAGTTGAAAAAGAGAAGACCAATGAAGCGATCAAAGAATGTTAGGAATACAAAAGCCATGGCGAAGGCCATATCCAAGGGCGAGCAGACAACCGAGAAAATATTGAAAAATCAGAGCAAAATTATCAGAATACAATCTGCAAAAACATTGTATGAATGA

Coding sequence (CDS)

ATGACGATAAGAGGAATCAGTCATGATGTTGTCTCATATGCAAGTATCATTTCTGGTTACTCAAAAGCTCGCAACCTTTATAAGGTACTCAGGCTTTTTGACAATATGAAGCAAATTAAAATAGACCCTAATAGGAAAGTCTACAATGCAGTCATTCATGCTCTTGCCAAAAGTGGGCTTTTGAAAGAAGCTAAAAATCTCATAAAAACGATGGAAGAGAAGGGGATTATTGCAAATGCTGTTACTTATAACTCAATTGTAAAGCCTTTATGCAAGGCCCGAAAATTTGATGAAGCTAGAGCAATTTTTTATGTGCTCTTGCAGCGAGGACTTGATAATGTTTCCAAAATATGGCATGAAATGAGTGAAAATGGAATTAGTCCTAATCGCAGCTCTTATATTGTCTTAATACATGGTCTCTTCTTGAATGGAAACTTAGAAGATGCATACAAATACTATCTAGAAATGAAGGAAAAAGAGTTACTTCCTGAACCAAAGATAGATGAGGTGCATGACATCAACCGTTCATTTGAGTGTGCACTAGGCTCAACTCTAGGTTTTGGAGATTCATCAGAAAACACTTCTGATAAATGTGGTGGTGGTCGAACAACAACGTTTTCCGACGGCGTTTCCATTAGGCGCGATTTGCAGCTTGTGGGTCTGTTTTTGGGCATTTTTCCAGCGTGTTGTCTATTGGGTAAGCGTTTAGAAGCTTCTTCTTGGTTGATTTTTGAGTTTTATCGATTACCCATTCGTTATTCTTTCCGTTTAGCGAGCATTCTCTTCGTATATGGCATTTTGAGTGTTGGACCTCCAAGTTTCTGCAGTTTAGGAGCGTGTTCGCTTTGGTGCCCATTGCGTTCGGTTGTCAAATTGCCTATCTTAGGTGGAGTTGTGAGCTTGGACAGCAAACTTTGTTGCTGTTTAGATCGTATGGTTGATTGCCCTGCATGTCTGATTGGTGGTGGTGGCTCATTGTATTCTGGAGTTGTTGTTGAGCCGTACCCATTATGGGAGTGTTTTGTTTGCTCTTTCAGGTGTCAGGAAATTTTTGGATTTTTCTTACGTATGTTGTTATGCTGCCGAATTTTCGGTAGCACAATGGCAAGAGTGGGACTAAGCTTAGTAGAACCTTCTCTGATTAGACTAAGCTTAGTAGGATCCTTCGATACGTTACGCTCGATAGTCGTACGCACGAGATCGTGCACCCTATCAGTGACTGATAGAGCTTACTTCTTTGGCACGAGATCGTGCATTCCATCAGGACGGTGTCGAGCTAGGCACAGGATTGTGCGCCAGATGACATTTGTTGGGGAGGCTTCTTGCTTTTTTCGTCTTAGGGTTTTCGATGTCGATCTCCGCAGCTCTCATCTCTCGGCGATGGCGAAGAACAGGAATAAGAAGAAGCGAAGTGGGGCTATGTCTATGGACATAACCGAAAATACCGTTAATGAGCTCCCTCAAGCGATGGACGTGTCTGAGTCTGCAGTTCATAAACCAGCTTCTGGCGCTCCCAATCTCTGCCTTCTTTCTGTTTCACCCACAACTTCTGATCATTACTCTTTGTTTGACAGAAAGTTGAAAAAGAGAAGACCAATGAAGCGATCAAAGAATGTTAGGAATACAAAAGCCATGGCGAAGGCCATATCCAAGGGCGAGCAGACAACCGAGAAAATATTGAAAAATCAGAGCAAAATTATCAGAATACAATCTGCAAAAACATTGTATGAATGA

Protein sequence

MTIRGISHDVVSYASIISGYSKARNLYKVLRLFDNMKQIKIDPNRKVYNAVIHALAKSGLLKEAKNLIKTMEEKGIIANAVTYNSIVKPLCKARKFDEARAIFYVLLQRGLDNVSKIWHEMSENGISPNRSSYIVLIHGLFLNGNLEDAYKYYLEMKEKELLPEPKIDEVHDINRSFECALGSTLGFGDSSENTSDKCGGGRTTTFSDGVSIRRDLQLVGLFLGIFPACCLLGKRLEASSWLIFEFYRLPIRYSFRLASILFVYGILSVGPPSFCSLGACSLWCPLRSVVKLPILGGVVSLDSKLCCCLDRMVDCPACLIGGGGSLYSGVVVEPYPLWECFVCSFRCQEIFGFFLRMLLCCRIFGSTMARVGLSLVEPSLIRLSLVGSFDTLRSIVVRTRSCTLSVTDRAYFFGTRSCIPSGRCRARHRIVRQMTFVGEASCFFRLRVFDVDLRSSHLSAMAKNRNKKKRSGAMSMDITENTVNELPQAMDVSESAVHKPASGAPNLCLLSVSPTTSDHYSLFDRKLKKRRPMKRSKNVRNTKAMAKAISKGEQTTEKILKNQSKIIRIQSAKTLYE

Homology

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BLAST of Spg030227 vs. NCBI nr
Match: XP_038895025.1 (pentatricopeptide repeat-containing protein At5g15010, mitochondrial-like [Benincasa hispida] >XP_038895032.1 pentatricopeptide repeat-containing protein At5g15010, mitochondrial-like [Benincasa hispida] >XP_038895041.1 pentatricopeptide repeat-containing protein At5g15010, mitochondrial-like [Benincasa hispida] >XP_038895051.1 pentatricopeptide repeat-containing protein At5g15010, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 274.2 bits (700), Expect = 2.5e-69
Identity = 149/222 (67.12%), Postives = 159/222 (71.62%), Query Frame = 0


Query: 1   MTIRGISHDVVSYASIISGYSKARNLYKVLRLFDNMKQIKIDPNRKVYNAVIHALAKSGL 60
           MT RGISHD VSYAS IS YSKARNLYKVLRLFD+MKQ+KI+P+RKVYNAVIHALAK  L
Sbjct: 332 MTQRGISHDAVSYASFISCYSKARNLYKVLRLFDDMKQMKIEPDRKVYNAVIHALAKGRL 391

Query: 61  LKEAKNLIKTMEEKGIIANAVTYNSIVKPLCKARKFDEARAIFYVLLQRG---------- 120
           LKEA NLIKTMEEKGIIAN VTYNS++KPLCKARKFDEARA+F  LLQRG          
Sbjct: 392 LKEAINLIKTMEEKGIIANVVTYNSVIKPLCKARKFDEARAVFEELLQRGLCPTIQTYHA 451

Query: 121 ------------------------------------------LDNVSKIWHEMSENGISP 171
                                                     LDNVS+IWHEMSENGISP
Sbjct: 452 FLRFLRTEEEIFELLKKMRKMGCDPTAETYIMLIRKFCRWRQLDNVSRIWHEMSENGISP 511

[Close]

BLAST of Spg030227 vs. NCBI nr
Match: XP_022145432.1 (pentatricopeptide repeat-containing protein At5g15010, mitochondrial-like [Momordica charantia] >XP_022145440.1 pentatricopeptide repeat-containing protein At5g15010, mitochondrial-like [Momordica charantia] >XP_022145448.1 pentatricopeptide repeat-containing protein At5g15010, mitochondrial-like [Momordica charantia])

HSP 1 Score: 272.3 bits (695), Expect = 9.5e-69
Identity = 158/257 (61.48%), Postives = 174/257 (67.70%), Query Frame = 0


Query: 1   MTIRGISHDVVSYASIISGYSKARNLYKVLRLFDNMKQIKIDPNRKVYNAVIHALAKSGL 60
           MT RGISHD VSYASIIS YSKAR+LYKVLRLFDNMKQ+KI+P+RKVYNAVIHALAK GL
Sbjct: 336 MTQRGISHDAVSYASIISCYSKARHLYKVLRLFDNMKQMKIEPDRKVYNAVIHALAKGGL 395

Query: 61  LKEAKNLIKTMEEKGIIANAVTYNSIVKPLCKARKFDEARAIFYVLLQRG---------- 120
           LKEA +LIK MEEKGIIA+ VTYNS++KPLCKARKFDEARA+F  LLQRG          
Sbjct: 396 LKEASHLIKCMEEKGIIADVVTYNSVIKPLCKARKFDEARAVFEELLQRGLFPTIQTYHA 455

Query: 121 ------------------------------------------LDNVSKIWHEMSENGISP 180
                                                     LDNVSKIW EMSE+GISP
Sbjct: 456 FLRFLRTEEEIFELLERMRRMGCNPTTDTYIMLIRKFCRWRQLDNVSKIWREMSESGISP 515

Query: 181 NRSSYIVLIHGLFLNGNLEDAYKYYLEMKEKELLPEPKIDEVHDINRSFECAL-GSTLGF 205
           +RSSYIVLIHGLFLNG LEDAYKYYLEMKEKELLPEPKIDEV     + +  + G T G 
Sbjct: 516 DRSSYIVLIHGLFLNGKLEDAYKYYLEMKEKELLPEPKIDEVLQAWLAGKPMIQGYTNGL 575

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BLAST of Spg030227 vs. NCBI nr
Match: XP_022979235.1 (pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X1 [Cucurbita maxima] >XP_022979236.1 pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X1 [Cucurbita maxima] >XP_022979237.1 pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X1 [Cucurbita maxima] >XP_022979238.1 pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X1 [Cucurbita maxima])

HSP 1 Score: 270.0 bits (689), Expect = 4.7e-68
Identity = 154/257 (59.92%), Postives = 171/257 (66.54%), Query Frame = 0


Query: 1   MTIRGISHDVVSYASIISGYSKARNLYKVLRLFDNMKQIKIDPNRKVYNAVIHALAKSGL 60
           MT RGI HD VSYASIIS YSK RNLY+VLRLFDNMKQ+KIDP+RKVYNAVIHALAK GL
Sbjct: 337 MTQRGIGHDAVSYASIISCYSKLRNLYRVLRLFDNMKQMKIDPDRKVYNAVIHALAKGGL 396

Query: 61  LKEAKNLIKTMEEKGIIANAVTYNSIVKPLCKARKFDEARAIFYVLLQRG---------- 120
           LKEA +LIKTMEEKGII N VTYNS++KPLCKARKFD+AR +   LL+RG          
Sbjct: 397 LKEAIDLIKTMEEKGIIPNVVTYNSVIKPLCKARKFDDARVVLEELLERGLCPTIQTYHA 456

Query: 121 ------------------------------------------LDNVSKIWHEMSENGISP 180
                                                     LD VS+IWHEMSENGISP
Sbjct: 457 FLRFLRTEEEIFEVLEKMRTMGCNPTTETYIMLIRKFCRWRQLDIVSRIWHEMSENGISP 516

Query: 181 NRSSYIVLIHGLFLNGNLEDAYKYYLEMKEKELLPEPKIDEVHDINRSFECALGSTLGF- 205
           +RSSYIVLIHGLFLNG LEDAYKYYLEMKEKELLPEPKIDEV    +++        G+ 
Sbjct: 517 DRSSYIVLIHGLFLNGKLEDAYKYYLEMKEKELLPEPKIDEV---LKAWLAGKPVIQGYM 576

[Close]

BLAST of Spg030227 vs. NCBI nr
Match: XP_022979239.1 (pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X2 [Cucurbita maxima])

HSP 1 Score: 270.0 bits (689), Expect = 4.7e-68
Identity = 154/257 (59.92%), Postives = 171/257 (66.54%), Query Frame = 0


Query: 1   MTIRGISHDVVSYASIISGYSKARNLYKVLRLFDNMKQIKIDPNRKVYNAVIHALAKSGL 60
           MT RGI HD VSYASIIS YSK RNLY+VLRLFDNMKQ+KIDP+RKVYNAVIHALAK GL
Sbjct: 305 MTQRGIGHDAVSYASIISCYSKLRNLYRVLRLFDNMKQMKIDPDRKVYNAVIHALAKGGL 364

Query: 61  LKEAKNLIKTMEEKGIIANAVTYNSIVKPLCKARKFDEARAIFYVLLQRG---------- 120
           LKEA +LIKTMEEKGII N VTYNS++KPLCKARKFD+AR +   LL+RG          
Sbjct: 365 LKEAIDLIKTMEEKGIIPNVVTYNSVIKPLCKARKFDDARVVLEELLERGLCPTIQTYHA 424

Query: 121 ------------------------------------------LDNVSKIWHEMSENGISP 180
                                                     LD VS+IWHEMSENGISP
Sbjct: 425 FLRFLRTEEEIFEVLEKMRTMGCNPTTETYIMLIRKFCRWRQLDIVSRIWHEMSENGISP 484

Query: 181 NRSSYIVLIHGLFLNGNLEDAYKYYLEMKEKELLPEPKIDEVHDINRSFECALGSTLGF- 205
           +RSSYIVLIHGLFLNG LEDAYKYYLEMKEKELLPEPKIDEV    +++        G+ 
Sbjct: 485 DRSSYIVLIHGLFLNGKLEDAYKYYLEMKEKELLPEPKIDEV---LKAWLAGKPVIQGYM 544

[Close]

BLAST of Spg030227 vs. NCBI nr
Match: XP_023527399.1 (pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 268.5 bits (685), Expect = 1.4e-67
Identity = 154/258 (59.69%), Postives = 167/258 (64.73%), Query Frame = 0


Query: 1   MTIRGISHDVVSYASIISGYSKARNLYKVLRLFDNMKQIKIDPNRKVYNAVIHALAKSGL 60
           M  RGI HD VSYASIIS YSK RNLY+VLRLFDNMKQ+KIDP+RKVYNAVIHALAK GL
Sbjct: 300 MAQRGIGHDAVSYASIISCYSKVRNLYRVLRLFDNMKQMKIDPDRKVYNAVIHALAKGGL 359

Query: 61  LKEAKNLIKTMEEKGIIANAVTYNSIVKPLCKARKFDEARAIFYVLLQRG---------- 120
           LKEA +LIKTMEEKGII N VTYNS++KPLCKARKFD+AR +F  LL+RG          
Sbjct: 360 LKEAIDLIKTMEEKGIIPNVVTYNSVIKPLCKARKFDDARVVFEELLKRGLCPTIQTYHA 419

Query: 121 ------------------------------------------LDNVSKIWHEMSENGISP 180
                                                     LD VS+IWHEMSENGISP
Sbjct: 420 FLRFLRTEEEIFEVLENMRTMGCNPTTETYIMLIRKFCRWRQLDIVSRIWHEMSENGISP 479

Query: 181 NRSSYIVLIHGLFLNGNLEDAYKYYLEMKEKELLPEPKIDEVHDINRSFECALGSTLG-- 203
           +RSSYIVLIHGLFLNG LEDAYKYYLEMKEKELLPEPKIDEV       +  L    G  
Sbjct: 480 DRSSYIVLIHGLFLNGKLEDAYKYYLEMKEKELLPEPKIDEV------LKAWLAGNPGIQ 539

[Close]

BLAST of Spg030227 vs. ExPASy Swiss-Prot
Match: Q9LFQ4 (Pentatricopeptide repeat-containing protein At5g15010, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g15010 PE=2 SV=2)

HSP 1 Score: 182.6 bits (462), Expect = 1.3e-44
Identity = 99/219 (45.21%), Postives = 132/219 (60.27%), Query Frame = 0


Query: 5   GISHDVVSYASIISGYSKARNLYKVLRLFDNMKQIKIDPNRKVYNAVIHALAKSGLLKEA 64
           G+ HDVVSY+S+IS YSK  +L KVL+LFD MK+  I+P+RKVYNAV+HALAK+  + EA
Sbjct: 297 GVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEA 356

Query: 65  KNLIKTM-EEKGIIANAVTYNSIVKPLCKARKFDEARAIFYVLLQRGL------------ 124
           +NL+KTM EEKGI  N VTYNS++KPLCKARK +EA+ +F  +L++GL            
Sbjct: 357 RNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMR 416

Query: 125 ----------------------------------------DNVSKIWHEMSENGISPNRS 171
                                                   DNV  +W EM E  + P+ S
Sbjct: 417 ILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLS 476

[Close]

BLAST of Spg030227 vs. ExPASy Swiss-Prot
Match: Q9SAH2 (Pentatricopeptide repeat-containing protein At1g80880, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g80880 PE=2 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 4.2e-19
Identity = 51/172 (29.65%), Postives = 92/172 (53.49%), Query Frame = 0


Query: 12  SYASIISGYSKARNLYKVLRLFDNMKQIKIDPNRKVYNAVIHALAKSGLLKEAKNLIKTM 71
           SY+ +IS +SK  NL+  LRL+D MK+  + P  +VYN++++ L +     EA  L+K +
Sbjct: 296 SYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKL 355

Query: 72  EEKGIIANAVTYNSIVKPLCKARKFDEARAIFYVLLQRGLDNVSKIWH------------ 131
            E+G+  ++VTYNS+++PLC+A K D AR +   ++   L      +H            
Sbjct: 356 NEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAVNFEKTL 415

Query: 132 ----EMSENGISPNRSSYIVLIHGLFLNGNLEDAYKYYLEMKEKELLPEPKI 168
               +M  + + P   ++++++  LF     E+A K + EM   E++  P +
Sbjct: 416 EVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPAL 467

[Close]

BLAST of Spg030227 vs. ExPASy Swiss-Prot
Match: Q9LPX2 (Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12775 PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 6.0e-18
Identity = 52/184 (28.26%), Postives = 93/184 (50.54%), Query Frame = 0


Query: 1   MTIRGISHDVVSYASIISGYSKARNLYKVLRLFDNMKQIKIDPNRKVYNAVIHALAKSGL 60
           M I+G   D+++Y ++I G+  A       +L  +M + KI PN   ++ +I +  K G 
Sbjct: 289 MEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGK 348

Query: 61  LKEAKNLIKTMEEKGIIANAVTYNSIVKPLCKARKFDEARAIFYVLLQRG---------- 120
           L+EA  L+K M ++GI  N +TYNS++   CK  + +EA  +  +++ +G          
Sbjct: 349 LREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNI 408

Query: 121 ----------LDNVSKIWHEMSENGISPNRSSYIVLIHGLFLNGNLEDAYKYYLEMKEKE 165
                     +D+  +++ EMS  G+  N  +Y  L+ G   +G LE A K + EM  + 
Sbjct: 409 LINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRR 468

[Close]

BLAST of Spg030227 vs. ExPASy Swiss-Prot
Match: P0C7R3 (Pentatricopeptide repeat-containing protein At1g64583, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g64583 PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.0e-17
Identity = 57/180 (31.67%), Postives = 87/180 (48.33%), Query Frame = 0


Query: 1   MTIRGISHDVVSYASIISGYSKARNLYKVLRLFDNMKQIKIDPNRKVYNAVIHALAKSGL 60
           M  R I+ DVV++ ++I  + K  NL +   L+  M Q  +DPN   YN++I+ L   G 
Sbjct: 237 MMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGR 296

Query: 61  LKEAKNLIKTMEEKGIIANAVTYNSIVKPLCKARKFDEARAIF--------------YVL 120
           L +AK     M  KG   N VTYN+++   CK R  DE   +F              Y  
Sbjct: 297 LYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNT 356

Query: 121 LQRGLDNVSK------IWHEMSENGISPNRSSYIVLIHGLFLNGNLEDAYKYYLEMKEKE 161
           L  G   V K      I+  M    ++P+  ++ +L+HGL +NG +E A   + +M+E E
Sbjct: 357 LIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESE 416

[Close]

BLAST of Spg030227 vs. ExPASy Swiss-Prot
Match: Q9CAN5 (Pentatricopeptide repeat-containing protein At1g63080, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g63080 PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.0e-17
Identity = 54/184 (29.35%), Postives = 92/184 (50.00%), Query Frame = 0


Query: 1   MTIRGISHDVVSYASIISGYSKARNLYKVLRLFDNMKQIKIDPNRKVYNAVIHALAKSGL 60
           M  R I+ +VV++ S+I  ++K   L +  +LFD M Q  IDPN   YN++I+       
Sbjct: 301 MLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDR 360

Query: 61  LKEAKNLIKTMEEKGIIANAVTYNSIVKPLCKARKFDEARAIFYVLLQRGL--------- 120
           L EA+ +   M  K  + + VTYN+++   CKA+K  +   +F  + +RGL         
Sbjct: 361 LDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTT 420

Query: 121 -----------DNVSKIWHEMSENGISPNRSSYIVLIHGLFLNGNLEDAYKYYLEMKEKE 165
                      DN   ++ +M  +G+ PN  +Y  L+ GL  NG LE A   +  +++ +
Sbjct: 421 LIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSK 480

[Close]

BLAST of Spg030227 vs. ExPASy TrEMBL
Match: A0A6J1CVY6 (pentatricopeptide repeat-containing protein At5g15010, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC111014876 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 4.6e-69
Identity = 158/257 (61.48%), Postives = 174/257 (67.70%), Query Frame = 0


Query: 1   MTIRGISHDVVSYASIISGYSKARNLYKVLRLFDNMKQIKIDPNRKVYNAVIHALAKSGL 60
           MT RGISHD VSYASIIS YSKAR+LYKVLRLFDNMKQ+KI+P+RKVYNAVIHALAK GL
Sbjct: 336 MTQRGISHDAVSYASIISCYSKARHLYKVLRLFDNMKQMKIEPDRKVYNAVIHALAKGGL 395

Query: 61  LKEAKNLIKTMEEKGIIANAVTYNSIVKPLCKARKFDEARAIFYVLLQRG---------- 120
           LKEA +LIK MEEKGIIA+ VTYNS++KPLCKARKFDEARA+F  LLQRG          
Sbjct: 396 LKEASHLIKCMEEKGIIADVVTYNSVIKPLCKARKFDEARAVFEELLQRGLFPTIQTYHA 455

Query: 121 ------------------------------------------LDNVSKIWHEMSENGISP 180
                                                     LDNVSKIW EMSE+GISP
Sbjct: 456 FLRFLRTEEEIFELLERMRRMGCNPTTDTYIMLIRKFCRWRQLDNVSKIWREMSESGISP 515

Query: 181 NRSSYIVLIHGLFLNGNLEDAYKYYLEMKEKELLPEPKIDEVHDINRSFECAL-GSTLGF 205
           +RSSYIVLIHGLFLNG LEDAYKYYLEMKEKELLPEPKIDEV     + +  + G T G 
Sbjct: 516 DRSSYIVLIHGLFLNGKLEDAYKYYLEMKEKELLPEPKIDEVLQAWLAGKPMIQGYTNGL 575

[Close]

BLAST of Spg030227 vs. ExPASy TrEMBL
Match: A0A6J1IVL9 (pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111479025 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 2.3e-68
Identity = 154/257 (59.92%), Postives = 171/257 (66.54%), Query Frame = 0


Query: 1   MTIRGISHDVVSYASIISGYSKARNLYKVLRLFDNMKQIKIDPNRKVYNAVIHALAKSGL 60
           MT RGI HD VSYASIIS YSK RNLY+VLRLFDNMKQ+KIDP+RKVYNAVIHALAK GL
Sbjct: 337 MTQRGIGHDAVSYASIISCYSKLRNLYRVLRLFDNMKQMKIDPDRKVYNAVIHALAKGGL 396

Query: 61  LKEAKNLIKTMEEKGIIANAVTYNSIVKPLCKARKFDEARAIFYVLLQRG---------- 120
           LKEA +LIKTMEEKGII N VTYNS++KPLCKARKFD+AR +   LL+RG          
Sbjct: 397 LKEAIDLIKTMEEKGIIPNVVTYNSVIKPLCKARKFDDARVVLEELLERGLCPTIQTYHA 456

Query: 121 ------------------------------------------LDNVSKIWHEMSENGISP 180
                                                     LD VS+IWHEMSENGISP
Sbjct: 457 FLRFLRTEEEIFEVLEKMRTMGCNPTTETYIMLIRKFCRWRQLDIVSRIWHEMSENGISP 516

Query: 181 NRSSYIVLIHGLFLNGNLEDAYKYYLEMKEKELLPEPKIDEVHDINRSFECALGSTLGF- 205
           +RSSYIVLIHGLFLNG LEDAYKYYLEMKEKELLPEPKIDEV    +++        G+ 
Sbjct: 517 DRSSYIVLIHGLFLNGKLEDAYKYYLEMKEKELLPEPKIDEV---LKAWLAGKPVIQGYM 576

[Close]

BLAST of Spg030227 vs. ExPASy TrEMBL
Match: A0A6J1IW50 (pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111479025 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 2.3e-68
Identity = 154/257 (59.92%), Postives = 171/257 (66.54%), Query Frame = 0


Query: 1   MTIRGISHDVVSYASIISGYSKARNLYKVLRLFDNMKQIKIDPNRKVYNAVIHALAKSGL 60
           MT RGI HD VSYASIIS YSK RNLY+VLRLFDNMKQ+KIDP+RKVYNAVIHALAK GL
Sbjct: 305 MTQRGIGHDAVSYASIISCYSKLRNLYRVLRLFDNMKQMKIDPDRKVYNAVIHALAKGGL 364

Query: 61  LKEAKNLIKTMEEKGIIANAVTYNSIVKPLCKARKFDEARAIFYVLLQRG---------- 120
           LKEA +LIKTMEEKGII N VTYNS++KPLCKARKFD+AR +   LL+RG          
Sbjct: 365 LKEAIDLIKTMEEKGIIPNVVTYNSVIKPLCKARKFDDARVVLEELLERGLCPTIQTYHA 424

Query: 121 ------------------------------------------LDNVSKIWHEMSENGISP 180
                                                     LD VS+IWHEMSENGISP
Sbjct: 425 FLRFLRTEEEIFEVLEKMRTMGCNPTTETYIMLIRKFCRWRQLDIVSRIWHEMSENGISP 484

Query: 181 NRSSYIVLIHGLFLNGNLEDAYKYYLEMKEKELLPEPKIDEVHDINRSFECALGSTLGF- 205
           +RSSYIVLIHGLFLNG LEDAYKYYLEMKEKELLPEPKIDEV    +++        G+ 
Sbjct: 485 DRSSYIVLIHGLFLNGKLEDAYKYYLEMKEKELLPEPKIDEV---LKAWLAGKPVIQGYM 544

[Close]

BLAST of Spg030227 vs. ExPASy TrEMBL
Match: A0A6J1E902 (pentatricopeptide repeat-containing protein At5g15010, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111431896 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 4.3e-67
Identity = 151/257 (58.75%), Postives = 170/257 (66.15%), Query Frame = 0


Query: 1   MTIRGISHDVVSYASIISGYSKARNLYKVLRLFDNMKQIKIDPNRKVYNAVIHALAKSGL 60
           MT RGI HD VSYASIIS YSK RNLY+V+RLFDNMKQ+KIDP+RKVYNAVIHALAK GL
Sbjct: 300 MTQRGIGHDAVSYASIISCYSKLRNLYRVVRLFDNMKQMKIDPDRKVYNAVIHALAKGGL 359

Query: 61  LKEAKNLIKTMEEKGIIANAVTYNSIVKPLCKARKFDEARAIFYVLLQRG---------- 120
           LKEA +LIKTMEEKGII N VTYNS++KPLCKA+KFD+AR +F  LL+RG          
Sbjct: 360 LKEAIDLIKTMEEKGIIPNVVTYNSVIKPLCKAQKFDDARVVFEELLERGLCPTIQTYHA 419

Query: 121 ------------------------------------------LDNVSKIWHEMSENGISP 180
                                                     LD VS+IWHEMSENGI P
Sbjct: 420 FLRFLRTEEEIFEVLEKMRRMGCNPITETYIMLIRKFCRWRQLDIVSRIWHEMSENGIGP 479

Query: 181 NRSSYIVLIHGLFLNGNLEDAYKYYLEMKEKELLPEPKIDEVHDINRSFECALGSTLGF- 205
           +RSSYIVLIHGLFLNG LEDAYKYYLEMKEKELLPEPKIDEV    +++        G+ 
Sbjct: 480 DRSSYIVLIHGLFLNGKLEDAYKYYLEMKEKELLPEPKIDEV---LKAWLAGKPVIQGYM 539

[Close]

BLAST of Spg030227 vs. ExPASy TrEMBL
Match: A0A0A0L308 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G118150 PE=4 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 1.4e-65
Identity = 149/257 (57.98%), Postives = 169/257 (65.76%), Query Frame = 0


Query: 1   MTIRGISHDVVSYASIISGYSKARNLYKVLRLFDNMKQIKIDPNRKVYNAVIHALAKSGL 60
           MT RGISHD VSYAS IS YSK RNL+KVLRLF++MK++KIDP+RKVYNAVIH+LAK   
Sbjct: 326 MTRRGISHDAVSYASCISCYSKVRNLHKVLRLFEDMKRMKIDPDRKVYNAVIHSLAKGRC 385

Query: 61  LKEAKNLIKTMEEKGIIANAVTYNSIVKPLCKARKFDEARAIFYVLLQRG---------- 120
           LKEA +LIKTMEEKGIIAN VTYNS++KPLCKAR+FDEARA+F  LLQRG          
Sbjct: 386 LKEAADLIKTMEEKGIIANVVTYNSVIKPLCKARRFDEARAVFEELLQRGLCPTIQTYHA 445

Query: 121 ------------------------------------------LDNVSKIWHEMSENGISP 180
                                                     LDNVS+IWHEMSENGISP
Sbjct: 446 FLRFLRTEEEIFELLKKMRTMGCNPTTDTYIMLIRKFCRWRQLDNVSRIWHEMSENGISP 505

Query: 181 NRSSYIVLIHGLFLNGNLEDAYKYYLEMKEKELLPEPKIDEVHDINRSFECALGSTLGFG 206
           +RSSYIVLIHGLFLNG LEDA+KYYLEMKEK+LLPEPKIDEV       +  L     F 
Sbjct: 506 DRSSYIVLIHGLFLNGKLEDAHKYYLEMKEKDLLPEPKIDEV------LQTWLAGKSVF- 565

[Close]

BLAST of Spg030227 vs. TAIR 10
Match: AT5G15010.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 182.6 bits (462), Expect = 9.2e-46
Identity = 99/219 (45.21%), Postives = 132/219 (60.27%), Query Frame = 0


Query: 5   GISHDVVSYASIISGYSKARNLYKVLRLFDNMKQIKIDPNRKVYNAVIHALAKSGLLKEA 64
           G+ HDVVSY+S+IS YSK  +L KVL+LFD MK+  I+P+RKVYNAV+HALAK+  + EA
Sbjct: 297 GVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEA 356

Query: 65  KNLIKTM-EEKGIIANAVTYNSIVKPLCKARKFDEARAIFYVLLQRGL------------ 124
           +NL+KTM EEKGI  N VTYNS++KPLCKARK +EA+ +F  +L++GL            
Sbjct: 357 RNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMR 416

Query: 125 ----------------------------------------DNVSKIWHEMSENGISPNRS 171
                                                   DNV  +W EM E  + P+ S
Sbjct: 417 ILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLS 476

[Close]

BLAST of Spg030227 vs. TAIR 10
Match: AT1G80880.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 97.8 bits (242), Expect = 3.0e-20
Identity = 51/172 (29.65%), Postives = 92/172 (53.49%), Query Frame = 0


Query: 12  SYASIISGYSKARNLYKVLRLFDNMKQIKIDPNRKVYNAVIHALAKSGLLKEAKNLIKTM 71
           SY+ +IS +SK  NL+  LRL+D MK+  + P  +VYN++++ L +     EA  L+K +
Sbjct: 296 SYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKL 355

Query: 72  EEKGIIANAVTYNSIVKPLCKARKFDEARAIFYVLLQRGLDNVSKIWH------------ 131
            E+G+  ++VTYNS+++PLC+A K D AR +   ++   L      +H            
Sbjct: 356 NEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAVNFEKTL 415

Query: 132 ----EMSENGISPNRSSYIVLIHGLFLNGNLEDAYKYYLEMKEKELLPEPKI 168
               +M  + + P   ++++++  LF     E+A K + EM   E++  P +
Sbjct: 416 EVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPAL 467

[Close]

BLAST of Spg030227 vs. TAIR 10
Match: AT1G12775.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 94.0 bits (232), Expect = 4.3e-19
Identity = 52/184 (28.26%), Postives = 93/184 (50.54%), Query Frame = 0


Query: 1   MTIRGISHDVVSYASIISGYSKARNLYKVLRLFDNMKQIKIDPNRKVYNAVIHALAKSGL 60
           M I+G   D+++Y ++I G+  A       +L  +M + KI PN   ++ +I +  K G 
Sbjct: 289 MEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGK 348

Query: 61  LKEAKNLIKTMEEKGIIANAVTYNSIVKPLCKARKFDEARAIFYVLLQRG---------- 120
           L+EA  L+K M ++GI  N +TYNS++   CK  + +EA  +  +++ +G          
Sbjct: 349 LREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNI 408

Query: 121 ----------LDNVSKIWHEMSENGISPNRSSYIVLIHGLFLNGNLEDAYKYYLEMKEKE 165
                     +D+  +++ EMS  G+  N  +Y  L+ G   +G LE A K + EM  + 
Sbjct: 409 LINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRR 468

[Close]

BLAST of Spg030227 vs. TAIR 10
Match: AT1G63080.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 93.2 bits (230), Expect = 7.3e-19
Identity = 54/184 (29.35%), Postives = 92/184 (50.00%), Query Frame = 0


Query: 1   MTIRGISHDVVSYASIISGYSKARNLYKVLRLFDNMKQIKIDPNRKVYNAVIHALAKSGL 60
           M  R I+ +VV++ S+I  ++K   L +  +LFD M Q  IDPN   YN++I+       
Sbjct: 301 MLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDR 360

Query: 61  LKEAKNLIKTMEEKGIIANAVTYNSIVKPLCKARKFDEARAIFYVLLQRGL--------- 120
           L EA+ +   M  K  + + VTYN+++   CKA+K  +   +F  + +RGL         
Sbjct: 361 LDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTT 420

Query: 121 -----------DNVSKIWHEMSENGISPNRSSYIVLIHGLFLNGNLEDAYKYYLEMKEKE 165
                      DN   ++ +M  +G+ PN  +Y  L+ GL  NG LE A   +  +++ +
Sbjct: 421 LIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSK 480

[Close]

BLAST of Spg030227 vs. TAIR 10
Match: AT1G64583.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 93.2 bits (230), Expect = 7.3e-19
Identity = 57/180 (31.67%), Postives = 87/180 (48.33%), Query Frame = 0


Query: 1   MTIRGISHDVVSYASIISGYSKARNLYKVLRLFDNMKQIKIDPNRKVYNAVIHALAKSGL 60
           M  R I+ DVV++ ++I  + K  NL +   L+  M Q  +DPN   YN++I+ L   G 
Sbjct: 237 MMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGR 296

Query: 61  LKEAKNLIKTMEEKGIIANAVTYNSIVKPLCKARKFDEARAIF--------------YVL 120
           L +AK     M  KG   N VTYN+++   CK R  DE   +F              Y  
Sbjct: 297 LYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNT 356

Query: 121 LQRGLDNVSK------IWHEMSENGISPNRSSYIVLIHGLFLNGNLEDAYKYYLEMKEKE 161
           L  G   V K      I+  M    ++P+  ++ +L+HGL +NG +E A   + +M+E E
Sbjct: 357 LIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESE 416

The following BLAST results are available for this feature:

BLAST of Spg030227 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895025.1	2.5e-69	67.12	pentatricopeptide repeat-containing protein At5g15010, mitochondrial-like [Benin...	[more]
XP_022145432.1	9.5e-69	61.48	pentatricopeptide repeat-containing protein At5g15010, mitochondrial-like [Momor...	[more]
XP_022979235.1	4.7e-68	59.92	pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X1 ...	[more]
XP_022979239.1	4.7e-68	59.92	pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X2 ...	[more]
XP_023527399.1	1.4e-67	59.69	pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X2 ...	[more]

BLAST of Spg030227 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LFQ4	1.3e-44	45.21	Pentatricopeptide repeat-containing protein At5g15010, mitochondrial OS=Arabidop...	[more]
Q9SAH2	4.2e-19	29.65	Pentatricopeptide repeat-containing protein At1g80880, mitochondrial OS=Arabidop...	[more]
Q9LPX2	6.0e-18	28.26	Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidop...	[more]
P0C7R3	1.0e-17	31.67	Pentatricopeptide repeat-containing protein At1g64583, mitochondrial OS=Arabidop...	[more]
Q9CAN5	1.0e-17	29.35	Pentatricopeptide repeat-containing protein At1g63080, mitochondrial OS=Arabidop...	[more]

BLAST of Spg030227 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CVY6	4.6e-69	61.48	pentatricopeptide repeat-containing protein At5g15010, mitochondrial-like OS=Mom...	[more]
A0A6J1IVL9	2.3e-68	59.92	pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X1 ...	[more]
A0A6J1IW50	2.3e-68	59.92	pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X2 ...	[more]
A0A6J1E902	4.3e-67	58.75	pentatricopeptide repeat-containing protein At5g15010, mitochondrial OS=Cucurbit...	[more]
A0A0A0L308	1.4e-65	57.98	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G118150 PE=4 SV=1	[more]

BLAST of Spg030227 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G15010.1	9.2e-46	45.21	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G80880.1	3.0e-20	29.65	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G12775.1	4.3e-19	28.26	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G63080.1	7.3e-19	29.35	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G64583.1	7.3e-19	31.67	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 47..79 e-value: 5.1E-6 score: 24.3 coord: 132..163 e-value: 2.7E-5 score: 22.0 coord: 11..38 e-value: 8.2E-5 score: 20.5 coord: 81..110 e-value: 0.0014 score: 16.7
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 11..39 e-value: 1.6E-4 score: 21.7
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 116..163 e-value: 5.3E-6 score: 26.4
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 43..92 e-value: 1.5E-10 score: 41.1
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 9..43 score: 11.070971
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 44..78 score: 11.224429
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 79..113 score: 10.632519
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 129..163 score: 10.358486
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 105..171 e-value: 1.3E-8 score: 36.7
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 1..104 e-value: 1.9E-27 score: 97.8
None	No IPR available	PANTHER	PTHR45613	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 110..170
None	No IPR available	PANTHER	PTHR45613:SF57	OS01G0816000 PROTEIN	coord: 110..170
None	No IPR available	PANTHER	PTHR45613:SF57	OS01G0816000 PROTEIN	coord: 1..111
None	No IPR available	PANTHER	PTHR45613	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 1..111

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg030227.1	Spg030227.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding