Spg029764 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACGAGCAAGAATGTTAGTAGACCACTCGAGACTAAATGTGGGAGAATCCTTGGTGTTGTTTCCACAAAGTCTCTTGGGAACTACCTTGGGATGCCATCCACTAACAACAAAAGCAAAAATAGGATGTTCACTAAGATCAAAGATAGTGTTTGGAAAGTGCTCCAAAGCTGGAAGGAAAAGCTTTTCTCAGCGGGTGGCAAAGAGGTTTTGATCAAAGCGGTGGCTCAAGCCATCCCGGTGTACACTATGAGTTGCTTCAGGCTTCCAAATGGTATTTGCAAAGAAATCAACAGCATTTGCTCCAAGTTTTGGTGGGGCTCCACTAGTGGGAAAAGGAAAATTCATTGGAAAAGCTAGAAGTTTTTGTGCAAGAGCAAGGAGATGGGCGGTTTAGGTTTTAGAGATATCCTCTCTTTAACCAAGCCATGCTTGCTACATTGAGTTGGCGTGTTATCAAAGACCCTTCCAGTCTTCTTGCTAGAACGTTGAAAGGAAGATATTTTCATGACAAACCGTTCCTTGAGGCCTCTTTGGGTTCCAATCCTTCCCTCACTTGGAAGAGCATCATGTGGGGAAAGACTTGTTCCTTAAAGGATATCGGTGGAGAGTGGGGAATGGAAAAAGTACATCGAGATTGATAAAGACCCTTGGATCAATAGAGGGCAGGCCATGATTCCTAGGCTTACCGGTGATGATTTAAAGGGCAGCAAGGTCAATAGCCTTATTGATGATAACAACAATTGGACAGAAGAAAAAGTGAGAGCCCATTTCAATCGGGAAGATGCTAATTACATCCTAAACACTCCCCTTGGGGATCCTAGTCCTAAGGATGAAATCATTTGGAGCCTTGACAAGAAAGGGATCTTTAAAGTTAAGAGTGCCTACCATTTGGCCCTCTTTTGCTCATCAGTTAGTGAGACTTCTGTTTCCGACCCTAGTAAACTGAAATCGGTGTGGCAGAGGCTGTGGAAAATTAAATCGATCCCAAAGGCCAAAATATGCACATGGAAATTTCTCAATGACATTCTTCCTAACATCCCCAATCTCCAAAAGAAAAACATTGATTCTAATCCCCTCTGTGTGTTGTGCAGGAAAAACAAGGAGTCTACAAGTCATACTTTTTGGGGCTGCAAGGTAGCTATTGAGATATGGAACCAGTTTATTCCCTCCTCATGCAGAGAAGATTGGACAAGCTTGGATTTCTGGAGCTAGTTGGTTAAGAAGCGGAGTGAGAAGGAGTTAAAGGTTGCTGTCATCCTAATTTGGAGTATATGGACTCTCAGGAACAAAATTCTCAATGACCCAAATAAATCAAAACCAGAGTCGATACAGATTTTCAATCAAATCAGCAGGAGCATGCATGATCTTGAAGGAAAGAATAGGCCTTACCAGTCCCCTGTTGATTTGGGGAGATGCGAGAGCTTCCGGAAGTCAGGTTTCTTGGAATCCCCGCCCCAAAACTGCTGGAAGCTAAATTCAAATGCCTCTTGGAATGAATCAGGCAGAGGTGGTTTAGGTTGGATCGTTCGTGACTCCCACGGGTCTCCCATCTGCGCCGGAATGAAATCAGTTACTCAACTTTGGCCCATTAAAGTGCTCGAAGCGAAGGTGATGTGGGAAGGTCTGAAATCATTGCTTACCTTGTCTGTAGACCGCCTCTGATTGAAGCAGAGTCTGACTGCTTAGAGCTCATCGCCGCCTTTAATGAAGATGAAGATGATCAATCGGAGATGAAGAGTTGCACTGAAGCTATTCGTCTCCTGTTCCCTGATCAGGGAGTGCTCGTCTTCAAGCACTGA ATGACGAGCAAGAATGTCAATAGCCTTATTGATGATAACAACAATTGGACAGAAGAAAAAGTGAGAGCCCATTTCAATCGGGAAGATGCTAATTACATCCTAAACACTCCCCTTGGGGATCCTAGTCCTAAGGATGAAATCATTTGGAGCCTTGACAAGAAAGGGATCTTTAAAGTTAAGAGTGCCTACCATTTGGCCCTCTTTTGCTCATCAGTTAGTGAGACTTCTGTTTCCGACCCTAGTAAACTGAAATCGGAAAAACAAGGAGTCTACAAGAACAAAATTCTCAATGACCCAAATAAATCAAAACCAGAGTCGATACAGATTTTCAATCAAATCAGCAGGAGCATGCATGATCTTGAAGGAAAGAATAGGCCTTACCAGTCCCCTGTTGATTTGGGGAGATGCGAGAGCTTCCGGAAGTCAGGTTTCTTGGAATCCCCGCCCCAAAACTGCTGGAAGCTAAATTCAAATGCCTCTTGGAATGAATCAGGCAGAGGTGATGTGGGAAGGTCTGAAATCATTGCTTACCTTGTCTGTAGACCGCCTCTGATTGAAGCAGAGTCTGACTGCTTAGAGCTCATCGCCGCCTTTAATGAAGATGAAGATGATCAATCGGAGATGAAGAGTTGCACTGAAGCTATTCGTCTCCTGTTCCCTGATCAGGGAGTGCTCGTCTTCAAGCACTGA ATGACGAGCAAGAATGTCAATAGCCTTATTGATGATAACAACAATTGGACAGAAGAAAAAGTGAGAGCCCATTTCAATCGGGAAGATGCTAATTACATCCTAAACACTCCCCTTGGGGATCCTAGTCCTAAGGATGAAATCATTTGGAGCCTTGACAAGAAAGGGATCTTTAAAGTTAAGAGTGCCTACCATTTGGCCCTCTTTTGCTCATCAGTTAGTGAGACTTCTGTTTCCGACCCTAGTAAACTGAAATCGGAAAAACAAGGAGTCTACAAGAACAAAATTCTCAATGACCCAAATAAATCAAAACCAGAGTCGATACAGATTTTCAATCAAATCAGCAGGAGCATGCATGATCTTGAAGGAAAGAATAGGCCTTACCAGTCCCCTGTTGATTTGGGGAGATGCGAGAGCTTCCGGAAGTCAGGTTTCTTGGAATCCCCGCCCCAAAACTGCTGGAAGCTAAATTCAAATGCCTCTTGGAATGAATCAGGCAGAGGTGATGTGGGAAGGTCTGAAATCATTGCTTACCTTGTCTGTAGACCGCCTCTGATTGAAGCAGAGTCTGACTGCTTAGAGCTCATCGCCGCCTTTAATGAAGATGAAGATGATCAATCGGAGATGAAGAGTTGCACTGAAGCTATTCGTCTCCTGTTCCCTGATCAGGGAGTGCTCGTCTTCAAGCACTGA MTSKNVNSLIDDNNNWTEEKVRAHFNREDANYILNTPLGDPSPKDEIIWSLDKKGIFKVKSAYHLALFCSSVSETSVSDPSKLKSEKQGVYKNKILNDPNKSKPESIQIFNQISRSMHDLEGKNRPYQSPVDLGRCESFRKSGFLESPPQNCWKLNSNASWNESGRGDVGRSEIIAYLVCRPPLIEAESDCLELIAAFNEDEDDQSEMKSCTEAIRLLFPDQGVLVFKH Homology
BLAST of Spg029764 vs. NCBI nr
Match: XP_040363828.1 (uncharacterized protein LOC112169513 [Rosa chinensis]) HSP 1 Score: 64.7 bits (156), Expect = 1.2e-06 Identity = 47/130 (36.15%), Postives = 73/130 (56.15%), Query Frame = 0
BLAST of Spg029764 vs. NCBI nr
Match: XP_015388020.1 (uncharacterized protein LOC107177951 [Citrus sinensis]) HSP 1 Score: 63.9 bits (154), Expect = 2.0e-06 Identity = 38/104 (36.54%), Postives = 54/104 (51.92%), Query Frame = 0
BLAST of Spg029764 vs. NCBI nr
Match: XP_024162452.1 (uncharacterized protein LOC112169623 [Rosa chinensis]) HSP 1 Score: 63.5 bits (153), Expect = 2.6e-06 Identity = 29/61 (47.54%), Postives = 37/61 (60.66%), Query Frame = 0
BLAST of Spg029764 vs. NCBI nr
Match: BAH93942.1 (Os07g0501200 [Oryza sativa Japonica Group]) HSP 1 Score: 63.2 bits (152), Expect = 3.5e-06 Identity = 51/178 (28.65%), Postives = 78/178 (43.82%), Query Frame = 0
BLAST of Spg029764 vs. NCBI nr
Match: XP_030502714.1 (uncharacterized protein LOC115717884 [Cannabis sativa]) HSP 1 Score: 62.4 bits (150), Expect = 5.9e-06 Identity = 31/74 (41.89%), Postives = 41/74 (55.41%), Query Frame = 0
BLAST of Spg029764 vs. ExPASy TrEMBL
Match: A0A1S8AC01 (Ribonuclease H-like superfamily protein OS=Citrus limon OX=2708 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 7.5e-07 Identity = 29/62 (46.77%), Postives = 41/62 (66.13%), Query Frame = 0
BLAST of Spg029764 vs. ExPASy TrEMBL
Match: A0A803QSV1 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 1.3e-06 Identity = 31/74 (41.89%), Postives = 43/74 (58.11%), Query Frame = 0
BLAST of Spg029764 vs. ExPASy TrEMBL
Match: C7J4L5 (Os07g0501200 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0501200 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 1.7e-06 Identity = 51/178 (28.65%), Postives = 78/178 (43.82%), Query Frame = 0
BLAST of Spg029764 vs. ExPASy TrEMBL
Match: A0A803QI38 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 2.9e-06 Identity = 31/77 (40.26%), Postives = 44/77 (57.14%), Query Frame = 0
BLAST of Spg029764 vs. ExPASy TrEMBL
Match: A0A5D3CRR9 (Putative non-LTR retroelement reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G00630 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 3.7e-06 Identity = 37/107 (34.58%), Postives = 54/107 (50.47%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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