Spg029658 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg029658
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold2: 21778509 .. 21779268 (-)
RNA-Seq Expression	Spg029658
Synteny	Spg029658

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGGTAGTGGAGGATATTGCTGCAGAGGTAGTTGAAGAAGACAATCCGAAGGAACCTGAAGGACAAAACCCAGAGCAGACTGACCCAACAGTTGCGGATACGGAGGAAGTTCAAGAAGAGAACACAGAGGAAGTTCAAGAAAAATAGACTGAGGATGCGCAAGAGGGACAGACAGAGGATGTGCAGGAAAAAGGCAATGAGCAGGTGGAGCAAGAACAGGAGGCTCGAGTAGAGGTTATCATGCCGAAAGTGCCACGACGTCGCCGCCGGAAGCAAAAAGGCGGCCGTGTTAAAGTAGTCCGAACTGATACTCCCTCGCCATCGACAACGGATTCGGAGAGAGAAAATGCAGAGAGAGAAGAACAGGAGAAAAAGGAAGTCGAAGACAAAGCAAGAGAGGAAGCAGAGAAAAAAGCAGAAGAAGAACTTTTGCCCAAACAAAGGGAAGACAAAGACAAAGGTATTGCTGAAGCATCACCGGAACCAGAAGATAGTGAAACAGAGGAGCCAAGGTTACCGTATAATCGCTTCATCAACAATCTTGCCAAAGCAAAGTATGCTGAGAAGAGACTTTTTGTTTGAACGAGGATTTGGTGATGATTTTCCACGGTTCTTAAGGACTGGAATAGTGAACCATGGCTGGAGTCAATTCTGTGCAAAGCCGGACCCGGTCAACTCTAACATTGTTCGAGAGTTTTATGCCAATATTGATGATCAAGAGGAATTTCAGGCTATCGTCCGAGGAGTACCCGTTGACTAG

mRNA sequence

AAGGTAGTGGAGGATATTGCTGCAGAGGTAGTTGAAGAAGACAATCCGAAGGAACCTGAAGGACAAAACCCAGAGCAGACTGACCCAACAGTTGCGGATACGGAGGAAGAAAAAGGCAATGAGCAGGTGGAGCAAGAACAGGAGGCTCGAGTAGAGGTTATCATGCCGAAAGTGCCACGACGTCGCCGCCGGAAGCAAAAAGGCGGCCGTGTTAAAGTAGTCCGAACTGATACTCCCTCGCCATCGACAACGGATTCGGAGAGAGAAAATGCAGAGAGAGAAGAACAGGAGAAAAAGGAAGTCGAAGACAAAGCAAGAGAGGAAGCAGAGAAAAAAGCAGAAGAAGAACTTTTGCCCAAACAAAGGGAAGACAAAGACAAAGGTATTGCTGAAGCATCACCGGAACCAGAAGATAGTGAAACAGAGGAGCCAAGGTTACCGTATAATCGCTTCATCAACAATCTTGCCAAAGCAAAGACTGGAATAGTGAACCATGGCTGGAGTCAATTCTGTGCAAAGCCGGACCCGGTCAACTCTAACATTGTTCGAGAGTTTTATGCCAATATTGATGATCAAGAGGAATTTCAGGCTATCGTCCGAGGAGTACCCGTTGACTAG

Coding sequence (CDS)

AAGGTAGTGGAGGATATTGCTGCAGAGGTAGTTGAAGAAGACAATCCGAAGGAACCTGAAGGACAAAACCCAGAGCAGACTGACCCAACAGTTGCGGATACGGAGGAAGAAAAAGGCAATGAGCAGGTGGAGCAAGAACAGGAGGCTCGAGTAGAGGTTATCATGCCGAAAGTGCCACGACGTCGCCGCCGGAAGCAAAAAGGCGGCCGTGTTAAAGTAGTCCGAACTGATACTCCCTCGCCATCGACAACGGATTCGGAGAGAGAAAATGCAGAGAGAGAAGAACAGGAGAAAAAGGAAGTCGAAGACAAAGCAAGAGAGGAAGCAGAGAAAAAAGCAGAAGAAGAACTTTTGCCCAAACAAAGGGAAGACAAAGACAAAGGTATTGCTGAAGCATCACCGGAACCAGAAGATAGTGAAACAGAGGAGCCAAGGTTACCGTATAATCGCTTCATCAACAATCTTGCCAAAGCAAAGACTGGAATAGTGAACCATGGCTGGAGTCAATTCTGTGCAAAGCCGGACCCGGTCAACTCTAACATTGTTCGAGAGTTTTATGCCAATATTGATGATCAAGAGGAATTTCAGGCTATCGTCCGAGGAGTACCCGTTGACTAG

Protein sequence

KVVEDIAAEVVEEDNPKEPEGQNPEQTDPTVADTEEEKGNEQVEQEQEARVEVIMPKVPRRRRRKQKGGRVKVVRTDTPSPSTTDSERENAEREEQEKKEVEDKAREEAEKKAEEELLPKQREDKDKGIAEASPEPEDSETEEPRLPYNRFINNLAKAKTGIVNHGWSQFCAKPDPVNSNIVREFYANIDDQEEFQAIVRGVPVD

Homology

The following BLAST results are available for this feature:

BLAST of Spg029658 vs.


Match Name	E-value	Identity	Description

BLAST of Spg029658 vs.


Match Name	E-value	Identity	Description

BLAST of Spg029658 vs.


Match Name	E-value	Identity	Description

BLAST of Spg029658 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 84..124
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..146
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..145

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg029658.1	Spg029658.1	mRNA