Spg029328 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCGGAATAATGGGCTGCGTCGATGCTGCTCGGTGCGCCATGATCGGGTCCGAGCAGCAGCGAGTGATCAACAAGCAGTTTGATCAGTTTCAGATGCCTCTTCACTACCCAAGGTACAAGAGGAGTGACTATGAGGGCATGCCGGAGTGGAAACTGGACTGTCTTCTCAAAGAATACGGCCTCCCGGTCGCCGGAGACGTCGCCCAGAAGCGGAAGTTTGCCATGGGAGCTTTCCTTTGGCCTTGTGAAATGTATTGA ATGAGCGGAATAATGGGCTGCGTCGATGCTGCTCGGTGCGCCATGATCGGGTCCGAGCAGCAGCGAGTGATCAACAAGCAGTTTGATCAGTTTCAGATGCCTCTTCACTACCCAAGGTACAAGAGGAGTGACTATGAGGGCATGCCGGAGTGGAAACTGGACTGTCTTCTCAAAGAATACGGCCTCCCGGTCGCCGGAGACGTCGCCCAGAAGCGGAAGTTTGCCATGGGAGCTTTCCTTTGGCCTTGTGAAATGTATTGA ATGAGCGGAATAATGGGCTGCGTCGATGCTGCTCGGTGCGCCATGATCGGGTCCGAGCAGCAGCGAGTGATCAACAAGCAGTTTGATCAGTTTCAGATGCCTCTTCACTACCCAAGGTACAAGAGGAGTGACTATGAGGGCATGCCGGAGTGGAAACTGGACTGTCTTCTCAAAGAATACGGCCTCCCGGTCGCCGGAGACGTCGCCCAGAAGCGGAAGTTTGCCATGGGAGCTTTCCTTTGGCCTTGTGAAATGTATTGA MSGIMGCVDAARCAMIGSEQQRVINKQFDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGDVAQKRKFAMGAFLWPCEMY Homology
BLAST of Spg029328 vs. NCBI nr
Match: XP_022958391.1 (uncharacterized protein LOC111459627 [Cucurbita moschata]) HSP 1 Score: 157.5 bits (397), Expect = 5.1e-35 Identity = 76/92 (82.61%), Postives = 80/92 (86.96%), Query Frame = 0
BLAST of Spg029328 vs. NCBI nr
Match: KAE8647840.1 (hypothetical protein Csa_000107 [Cucumis sativus]) HSP 1 Score: 156.8 bits (395), Expect = 8.6e-35 Identity = 69/81 (85.19%), Postives = 74/81 (91.36%), Query Frame = 0
BLAST of Spg029328 vs. NCBI nr
Match: KAA0042696.1 (hypothetical protein E6C27_scaffold44G001940 [Cucumis melo var. makuwa] >TYK06100.1 hypothetical protein E5676_scaffold376G002010 [Cucumis melo var. makuwa]) HSP 1 Score: 156.8 bits (395), Expect = 8.6e-35 Identity = 69/82 (84.15%), Postives = 73/82 (89.02%), Query Frame = 0
BLAST of Spg029328 vs. NCBI nr
Match: KAG6606051.1 (hypothetical protein SDJN03_03368, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 154.5 bits (389), Expect = 4.3e-34 Identity = 75/91 (82.42%), Postives = 79/91 (86.81%), Query Frame = 0
BLAST of Spg029328 vs. NCBI nr
Match: KAG7035999.1 (hypothetical protein SDJN02_02799, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 153.7 bits (387), Expect = 7.3e-34 Identity = 75/93 (80.65%), Postives = 79/93 (84.95%), Query Frame = 0
BLAST of Spg029328 vs. ExPASy TrEMBL
Match: A0A0A0KMG0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G151500 PE=4 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 1.8e-38 Identity = 75/86 (87.21%), Postives = 79/86 (91.86%), Query Frame = 0
BLAST of Spg029328 vs. ExPASy TrEMBL
Match: A0A6J1H1Y5 (uncharacterized protein LOC111459627 OS=Cucurbita moschata OX=3662 GN=LOC111459627 PE=4 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 2.4e-35 Identity = 76/92 (82.61%), Postives = 80/92 (86.96%), Query Frame = 0
BLAST of Spg029328 vs. ExPASy TrEMBL
Match: A0A5D3C447 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G002010 PE=4 SV=1) HSP 1 Score: 156.8 bits (395), Expect = 4.2e-35 Identity = 69/82 (84.15%), Postives = 73/82 (89.02%), Query Frame = 0
BLAST of Spg029328 vs. ExPASy TrEMBL
Match: A0A6J1CXF4 (uncharacterized protein LOC111015321 OS=Momordica charantia OX=3673 GN=LOC111015321 PE=4 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 3.8e-28 Identity = 60/84 (71.43%), Postives = 69/84 (82.14%), Query Frame = 0
BLAST of Spg029328 vs. ExPASy TrEMBL
Match: A0A2P6P6E1 (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0195541 PE=4 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 1.1e-22 Identity = 50/69 (72.46%), Postives = 56/69 (81.16%), Query Frame = 0
BLAST of Spg029328 vs. TAIR 10
Match: AT5G41761.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 92.8 bits (229), Expect = 1.4e-19 Identity = 40/58 (68.97%), Postives = 47/58 (81.03%), Query Frame = 0
BLAST of Spg029328 vs. TAIR 10
Match: AT3G55570.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41761.1); Has 128 Blast hits to 128 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 83.2 bits (204), Expect = 1.1e-16 Identity = 35/57 (61.40%), Postives = 43/57 (75.44%), Query Frame = 0
BLAST of Spg029328 vs. TAIR 10
Match: AT5G55620.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G09950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 70.9 bits (172), Expect = 5.8e-13 Identity = 29/55 (52.73%), Postives = 40/55 (72.73%), Query Frame = 0
BLAST of Spg029328 vs. TAIR 10
Match: AT3G09950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41761.1); Has 128 Blast hits to 128 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 70.1 bits (170), Expect = 9.9e-13 Identity = 31/54 (57.41%), Postives = 38/54 (70.37%), Query Frame = 0
BLAST of Spg029328 vs. TAIR 10
Match: AT3G11405.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 61.6 bits (148), Expect = 3.5e-10 Identity = 29/52 (55.77%), Postives = 38/52 (73.08%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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