Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTCTTCGGTTTAGCGATTTAGGGCAAGGAAGTTCACAGAAGTTGCTTCGTGTTTCTAGGCTGTAATGACATGAAGGAATGCCATTCCCTGAGTGGGTTCGTCAGGTAGTTGGAGTGTAAACGGGAGCGAGAGATAGAAGACAAACGAGCGAGAGCGAAAATGAGAGCCTGATCGTGAATTTAAGAGGGTGTAATTGAAATTAGGGAAAATCTATGTGTTGCCTTTTTTTTTTCCTGATGTGCGTGTGATGTTTAAAATGCATTTAGGTTCGAAATGGCACATGCTATGAAGATTGCCGAGGCCGATCAATTTTCTACCCAAGTGACCTGCCTGTACCACATTGGGAATGCCAACGAGATCGTTAGCCACAAGCTCAACGCCAGGCGGAGGAACATGTTCAGGAGGACCGTATTTGGGCGGTTTCTGGACATGAATATTGTGTTCAACAGTCACCTGGTGCATCACGTGCTGCTTAGGGAGGTTCAAACAGACCGAATTGATGCAATGAGTTTCAATATCAGGGAGAGGGTCGTGACCTTCTCGAAGGAGGAGTTCCTCTTGATGACGGGACTCTAGAGGAGCCTCGCTCCTCGAGTTCAACGGGGCTATATACCGAGAATGGGGTTGGAGAGAAAGTACTTTGGGGATACCAACCCGTCGGCCCCACTCAAATTGGAAAAGCTGGAGGAGAAGTACAAGGAACTCCAGTTTGAGACGGACGAGGATGCAGTCAGGGTCACCTTGGTTTACTACACGGAGGTGGCAATGATGGGGAAGAACAAGACCAAAAGTGTCGTCGACAAAACACTGTTCGACGATGTTGAAGACTTGGATTATTACAACAGCAGGGACTGA
mRNA sequence
ATGGGTCTTCGGTTTAGCGATTTAGGGCAAGGAAGTTCACAGAAGTTGCTTCGTGTTTCTAGGCTGTTCGAAATGGCACATGCTATGAAGATTGCCGAGGCCGATCAATTTTCTACCCAAGTGACCTGCCTGTACCACATTGGGAATGCCAACGAGATCGTTAGCCACAAGCTCAACGCCAGGCGGAGGAACATGTTCAGGAGGACCGTATTTGGGCGGTTTCTGGACATGAATATTGTGTTCAACAGTCACCTGGTGCATCACGTGCTGCTTAGGGAGAGGAGCCTCGCTCCTCGAGTTCAACGGGGCTATATACCGAGAATGGGGTTGGAGAGAAAGTACTTTGGGGATACCAACCCGTCGGCCCCACTCAAATTGGAAAAGCTGGAGGAGAAGTACAAGGAACTCCAGTTTGAGACGGACGAGGATGCAGTCAGGGTCACCTTGGTTTACTACACGGAGGTGGCAATGATGGGGAAGAACAAGACCAAAAGTGTCGTCGACAAAACACTGTTCGACGATGTTGAAGACTTGGATTATTACAACAGCAGGGACTGA
Coding sequence (CDS)
ATGGGTCTTCGGTTTAGCGATTTAGGGCAAGGAAGTTCACAGAAGTTGCTTCGTGTTTCTAGGCTGTTCGAAATGGCACATGCTATGAAGATTGCCGAGGCCGATCAATTTTCTACCCAAGTGACCTGCCTGTACCACATTGGGAATGCCAACGAGATCGTTAGCCACAAGCTCAACGCCAGGCGGAGGAACATGTTCAGGAGGACCGTATTTGGGCGGTTTCTGGACATGAATATTGTGTTCAACAGTCACCTGGTGCATCACGTGCTGCTTAGGGAGAGGAGCCTCGCTCCTCGAGTTCAACGGGGCTATATACCGAGAATGGGGTTGGAGAGAAAGTACTTTGGGGATACCAACCCGTCGGCCCCACTCAAATTGGAAAAGCTGGAGGAGAAGTACAAGGAACTCCAGTTTGAGACGGACGAGGATGCAGTCAGGGTCACCTTGGTTTACTACACGGAGGTGGCAATGATGGGGAAGAACAAGACCAAAAGTGTCGTCGACAAAACACTGTTCGACGATGTTGAAGACTTGGATTATTACAACAGCAGGGACTGA
Protein sequence
MGLRFSDLGQGSSQKLLRVSRLFEMAHAMKIAEADQFSTQVTCLYHIGNANEIVSHKLNARRRNMFRRTVFGRFLDMNIVFNSHLVHHVLLRERSLAPRVQRGYIPRMGLERKYFGDTNPSAPLKLEKLEEKYKELQFETDEDAVRVTLVYYTEVAMMGKNKTKSVVDKTLFDDVEDLDYYNSRD
Homology
BLAST of Spg028976 vs. NCBI nr
Match:
XP_038888550.1 (uncharacterized protein LOC120078361 isoform X1 [Benincasa hispida])
HSP 1 Score: 169.1 bits (427), Expect = 3.6e-38
Identity = 98/193 (50.78%), Postives = 117/193 (60.62%), Query Frame = 0
Query: 25 MAHAMKIAEADQFSTQVTCLYHIGNANEIVSHKLNARRRNMFRRTVFGRFLDMNIVFNSH 84
M ++KI E D+F QVTCL H+ NAN+IV KL R+ MF+RTVFGRFLD+ +VFN+
Sbjct: 1 MLKSLKIREVDRFPGQVTCLAHVANANKIVKQKLTERQLEMFKRTVFGRFLDIELVFNNP 60
Query: 85 LVHHVLLRE--------------------------------RSLAPRVQRGYIPRMGLER 144
L+HH+LL E RSL RV R L
Sbjct: 61 LIHHMLLWEVKNSGMDSISFFVRGKVVTFSKDDFLLITGLWRSLT-RVGRSEESSHELFT 120
Query: 145 KYFGDTNPSAPLKLEKLEEKYKELQFETDEDAVRVTLVYYTEVAMMGKNKTKSVVDKTLF 186
KYFG S L LEE+YKEL FE D+DAV++TLVYYTEVAMM KNK K+VVD+TLF
Sbjct: 121 KYFGSRLASDTFHLHLLEEEYKELVFENDDDAVKITLVYYTEVAMMSKNKQKNVVDRTLF 180
BLAST of Spg028976 vs. NCBI nr
Match:
XP_038880341.1 (uncharacterized protein LOC120071983 [Benincasa hispida])
HSP 1 Score: 167.5 bits (423), Expect = 1.1e-37
Identity = 93/192 (48.44%), Postives = 119/192 (61.98%), Query Frame = 0
Query: 25 MAHAMKIAEADQFSTQVTCLYHIGNANEIVSHKLNARRRNMFRRTVFGRFLDMNIVFNSH 84
M+ ++KI E D+F QVTCL H+ NAN+IV KL R+ MF+RTVFGRFLD+ +VFN+
Sbjct: 1 MSKSLKIREVDRFPGQVTCLAHVANANKIVKQKLTERQLEMFKRTVFGRFLDIELVFNNP 60
Query: 85 LVHHVLLRE------RSLA-------------------------PRVQRGYIPRMGLERK 144
L+HH+LLRE S++ RV+ L +
Sbjct: 61 LIHHMLLREVKNSGMNSISFFVRGKVVIFSKDEFLLITCLWRSPTRVRWSEESSHELFTR 120
Query: 145 YFGDTNPSAPLKLEKLEEKYKELQFETDEDAVRVTLVYYTEVAMMGKNKTKSVVDKTLFD 186
YFG S L LEE+YKEL FE D+DAV++TLVYYTEVAMMGKNK K+ +D+TLFD
Sbjct: 121 YFGSQLTSDAFHLHLLEEEYKELVFENDDDAVKITLVYYTEVAMMGKNKQKNAIDRTLFD 180
BLAST of Spg028976 vs. NCBI nr
Match:
XP_038896702.1 (uncharacterized protein LOC120084963 [Benincasa hispida])
HSP 1 Score: 163.3 bits (412), Expect = 2.0e-36
Identity = 92/188 (48.94%), Postives = 114/188 (60.64%), Query Frame = 0
Query: 25 MAHAMKIAEADQFSTQVTCLYHIGNANEIVSHKLNARRRNMFRRTVFGRFLDMNIVFNSH 84
M+ ++KI E D+F QVTC+ H+ NAN+IV KL R+ MF+RTVFGRFLD+ +VFNS
Sbjct: 1 MSKSLKIREVDRFLGQVTCMAHVANANKIVKQKLTERQLEMFKRTVFGRFLDIELVFNSP 60
Query: 85 LVHHVLLRERSLA---------------------------PRVQRGYIPRMGLERKYFGD 144
L+HH+LLRE + RV R L K FG
Sbjct: 61 LIHHMLLREVKNSGMDSISFFVRGKVVTFSKDDFFVDHWFVRVGRSEKSSHELFIKCFGS 120
Query: 145 TNPSAPLKLEKLEEKYKELQFETDEDAVRVTLVYYTEVAMMGKNKTKSVVDKTLFDDVED 186
S L L+E+YKEL FE DEDAV++TL YYT+VAMMGKNK K+ +D TLFDDVED
Sbjct: 121 RLTSDAFHLHLLQEEYKELVFENDEDAVKITLAYYTKVAMMGKNKQKNAMDHTLFDDVED 180
BLAST of Spg028976 vs. NCBI nr
Match:
XP_038885808.1 (uncharacterized protein LOC120076102 [Benincasa hispida])
HSP 1 Score: 157.1 bits (396), Expect = 1.4e-34
Identity = 87/192 (45.31%), Postives = 118/192 (61.46%), Query Frame = 0
Query: 25 MAHAMKIAEADQFSTQVTCLYHIGNANEIVSHKLNARRRNMFRRTVFGRFLDMNIVFNSH 84
M+ ++KI D+FS QVT L H+ NAN+IV KL R+ MF+RTVFGRF+D+ +VFNS
Sbjct: 1 MSKSLKIHVVDRFSRQVTYLAHVANANKIVKQKLTERQLEMFKRTVFGRFIDIELVFNSP 60
Query: 85 LVHHVLLRE--------------RSLAPRVQRGYIPRMGLER-----------------K 144
L+HH+LL E + + G++ GL + +
Sbjct: 61 LIHHILLSEVKNSGMDSISFFVRGKVITFSKDGFLLITGLWQSPTRVGWSEESSHELFTR 120
Query: 145 YFGDTNPSAPLKLEKLEEKYKELQFETDEDAVRVTLVYYTEVAMMGKNKTKSVVDKTLFD 186
YFG S L L+E+YKEL FE D+DAV++TL+YY +VAMMGKNK K+VVD+T+FD
Sbjct: 121 YFGSRLTSDAFHLHLLKEEYKELVFENDDDAVKITLIYYIKVAMMGKNKQKNVVDRTIFD 180
BLAST of Spg028976 vs. NCBI nr
Match:
XP_038896011.1 (uncharacterized protein LOC120084191 [Benincasa hispida])
HSP 1 Score: 152.5 bits (384), Expect = 3.5e-33
Identity = 82/161 (50.93%), Postives = 111/161 (68.94%), Query Frame = 0
Query: 25 MAHAMKIAEADQFSTQVTCLYHIGNANEIVSHKLNARRRNMFRRTVFGRFLDMNIVFNSH 84
MA +IAEAD+F QVT L HI NAN+IV KL + +MF+RTVFGRF+D+++VFNS
Sbjct: 1 MATRFRIAEADRFPGQVTNLVHIANANKIVKEKLTPTQLDMFKRTVFGRFVDVDMVFNSP 60
Query: 85 LVHHVLLRERSLAPRVQRGYIPRMGLERKYFGDTNPSAPLKLEKLEEKYKELQFETDEDA 144
+VHH+LLR+ + +R + KYFG+ L L +LEEKYK+L+FE D+ A
Sbjct: 61 IVHHMLLRK----VKRRRSNSMSFSVYGKYFGNRVTKDTLHLRQLEEKYKDLEFENDDAA 120
Query: 145 VRVTLVYYTEVAMMGKNKTKSVVDKTLFDDVEDLDYYNSRD 186
V+++LVYYTEV MM KNK K+ + F DV++L+YYNS D
Sbjct: 121 VKISLVYYTEVTMMEKNKQKNAIYLKRFKDVQNLEYYNSLD 157
BLAST of Spg028976 vs. ExPASy TrEMBL
Match:
A0A6J1DSS5 (uncharacterized protein LOC111023969 OS=Momordica charantia OX=3673 GN=LOC111023969 PE=4 SV=1)
HSP 1 Score: 139.8 bits (351), Expect = 1.1e-29
Identity = 81/194 (41.75%), Postives = 117/194 (60.31%), Query Frame = 0
Query: 25 MAHAMKIAEADQFSTQVTCLYHIGNANEIVSHKLNARRRNMFR-RTVFGRFLDMNIVFNS 84
M H +K++EAD+F QVT L H+ N+I++ KL + +MFR RT+FGRF+D++++F S
Sbjct: 1 MEHTLKVSEADRFPAQVTSLSHLSTTNKIINQKLTPTQLDMFRKRTIFGRFVDLDMMFCS 60
Query: 85 HLVHHVLLRE--------------------------------RSLAPRVQRGYIPRMGLE 144
LVH+ LLRE RS + RV + + + L
Sbjct: 61 ALVHYFLLREVVDTRPDVMRFDILGTIVTFSKAEFLLMTGLWRS-SGRVLQKKVSKNRLR 120
Query: 145 RKYFGDTNPSAPLKLEKLEEKYKELQFETDEDAVRVTLVYYTEVAMMGKNKTKSVVDKTL 186
R+YF D L+LE+ E++YK++ F D+DAV+V+L+YYTE+ MMGKNK KS VDK L
Sbjct: 121 REYFKDV---VDLRLEEFEQEYKKIVFANDDDAVKVSLIYYTEIVMMGKNKGKSNVDKDL 180
BLAST of Spg028976 vs. ExPASy TrEMBL
Match:
A0A0A0KM59 (DUF1985 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G141180 PE=4 SV=1)
HSP 1 Score: 136.3 bits (342), Expect = 1.3e-28
Identity = 86/199 (43.22%), Postives = 115/199 (57.79%), Query Frame = 0
Query: 25 MAHAMKIAEADQFSTQVTCL-YHIGNANEIVSHKLNARRRNMFRRTVFGRFLDMNIVFNS 84
M +KI+ ++F Q + + HIG AN+IV KL ++ ++F+RTVFGRF+DM++VF+S
Sbjct: 1 MTRGLKISPNNRFPGQASSMSSHIGTANKIVKEKLTPKQLDLFKRTVFGRFVDMDLVFSS 60
Query: 85 HLVHHVLLRE----------------------------RSLAPRVQRGYIPRM----GLE 144
LVHH+LLRE L P + +PR+ L
Sbjct: 61 PLVHHILLREVKDERPDAMSFNLNGIIATFSKEEFLLVTGLWPSPTKP-VPRVEATKSLG 120
Query: 145 RKYFG-----DTNPSAPLKLEKLEEKYKELQFETDEDAVRVTLVYYTEVAMMGKNKTKSV 186
KYFG D NP EE+YK L F D DAV+VTLVYYTE+AMMGK++TKS+
Sbjct: 121 TKYFGNELVVDMNPLT------FEERYKNLNFYDDLDAVKVTLVYYTELAMMGKDRTKSI 180
BLAST of Spg028976 vs. ExPASy TrEMBL
Match:
A0A1S3ATU8 (uncharacterized protein LOC103482899 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482899 PE=4 SV=1)
HSP 1 Score: 134.4 bits (337), Expect = 4.8e-28
Identity = 85/198 (42.93%), Postives = 112/198 (56.57%), Query Frame = 0
Query: 25 MAHAMKIAEADQFSTQVTCL-YHIGNANEIVSHKLNARRRNMFRRTVFGRFLDMNIVFNS 84
M +KI+ ++F Q + + HIG AN+IV KL ++ ++F+RTVFGRF+DM++VF+S
Sbjct: 84 MTRGLKISPNNRFPGQASSMSSHIGTANKIVKEKLTPKQLDLFKRTVFGRFVDMDLVFSS 143
Query: 85 HLVHHVLLRE----------------------------RSLAP---RVQRGYIPRMGLER 144
LVHH+LLRE L P + R L
Sbjct: 144 PLVHHILLREVKDERPDAMSFNLNGIIATFSKEEFLLVTGLWPSPTKSVRRVEASKSLGT 203
Query: 145 KYFG-----DTNPSAPLKLEKLEEKYKELQFETDEDAVRVTLVYYTEVAMMGKNKTKSVV 186
KYFG D NP EE+YK L F D DAV+VTLVYYTE+AMMGK++TKS++
Sbjct: 204 KYFGNELVVDMNPIT------FEERYKNLNFYDDLDAVKVTLVYYTELAMMGKDRTKSII 263
BLAST of Spg028976 vs. ExPASy TrEMBL
Match:
A0A1S3AUB0 (uncharacterized protein LOC103482899 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103482899 PE=4 SV=1)
HSP 1 Score: 134.4 bits (337), Expect = 4.8e-28
Identity = 85/198 (42.93%), Postives = 112/198 (56.57%), Query Frame = 0
Query: 25 MAHAMKIAEADQFSTQVTCL-YHIGNANEIVSHKLNARRRNMFRRTVFGRFLDMNIVFNS 84
M +KI+ ++F Q + + HIG AN+IV KL ++ ++F+RTVFGRF+DM++VF+S
Sbjct: 82 MTRGLKISPNNRFPGQASSMSSHIGTANKIVKEKLTPKQLDLFKRTVFGRFVDMDLVFSS 141
Query: 85 HLVHHVLLRE----------------------------RSLAP---RVQRGYIPRMGLER 144
LVHH+LLRE L P + R L
Sbjct: 142 PLVHHILLREVKDERPDAMSFNLNGIIATFSKEEFLLVTGLWPSPTKSVRRVEASKSLGT 201
Query: 145 KYFG-----DTNPSAPLKLEKLEEKYKELQFETDEDAVRVTLVYYTEVAMMGKNKTKSVV 186
KYFG D NP EE+YK L F D DAV+VTLVYYTE+AMMGK++TKS++
Sbjct: 202 KYFGNELVVDMNPIT------FEERYKNLNFYDDLDAVKVTLVYYTELAMMGKDRTKSII 261
BLAST of Spg028976 vs. ExPASy TrEMBL
Match:
A0A5A7TGU0 (Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001140 PE=4 SV=1)
HSP 1 Score: 133.7 bits (335), Expect = 8.1e-28
Identity = 85/198 (42.93%), Postives = 112/198 (56.57%), Query Frame = 0
Query: 25 MAHAMKIAEADQFSTQVTCL-YHIGNANEIVSHKLNARRRNMFRRTVFGRFLDMNIVFNS 84
M +KI+ ++F Q + + HIG AN+IV KL ++ ++F+RTVFGRF+DM++VF+S
Sbjct: 7 MTRGLKISPNNRFPGQASSMSSHIGTANKIVKEKLTPKQLDLFKRTVFGRFVDMDLVFSS 66
Query: 85 HLVHHVLLRE----------------------------RSLAP---RVQRGYIPRMGLER 144
LVHH+LLRE L P + R L
Sbjct: 67 PLVHHILLREVKDERPDAMSFNLNGIIATFSKEEFLLVTGLWPSPTKSVRRVEASKSLGT 126
Query: 145 KYFG-----DTNPSAPLKLEKLEEKYKELQFETDEDAVRVTLVYYTEVAMMGKNKTKSVV 186
KYFG D NP EE+YK L F D DAV+VTLVYYTE+AMMGK++TKS++
Sbjct: 127 KYFGNELVVDMNPIT------FEERYKNLNFCDDLDAVKVTLVYYTELAMMGKDRTKSII 186
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DSS5 | 1.1e-29 | 41.75 | uncharacterized protein LOC111023969 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A0A0KM59 | 1.3e-28 | 43.22 | DUF1985 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G141180 PE=... | [more] |
A0A1S3ATU8 | 4.8e-28 | 42.93 | uncharacterized protein LOC103482899 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
A0A1S3AUB0 | 4.8e-28 | 42.93 | uncharacterized protein LOC103482899 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
A0A5A7TGU0 | 8.1e-28 | 42.93 | Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G... | [more] |
Match Name | E-value | Identity | Description | |