Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCATAATTTTTCCAGGATACTTCGTATCTTGGATAAACCTGGTCCTAGCACTAAAACCCATGATGAGAGGTTGATTAGGGATCCGAGGAAGGGGAAAGAGCCCATGGAGCATAGTGTAGAATCAGGGACGAGATCGAAGGGAAAGAAAACTGACAGCATGACCAGCAAGGTCAGGGGGCTCAGACCTACAGATCGTACAATTCTGAGGAGCCCAGAACCAAGCACACTAAAGGGACGTGACCACACAGTTTCAACACCAAACTACAGTCATACCAAGACAGACCTGAGGAATCTGATCGAGGATAAGCGCAGAAGTGCCAAAATTTCCGAGGTCGAGGCCAGAGCTGCTGAAGCTGGCCAGGGCTGCTGAGGCCAAGAAGAACAATCAGGGAGACCTGCAGAAGCTAAAGGACTCGGGAGAGCAAGACCTGGAAGAACTAATCGACCAGGTCGACCCGCCCTTCACGAAAGAAGTCATGAAAGCTGAGGTACCCCAGAAGTTCAAGGTACCTGCATTCAAACCATATGATGGCAATAAAGACCCCGTGCAGCATCTAAATGCCTACAAAAGCTGGATGGACTTCCACGGCGTCTCAGATGCAATCAGGTGTCGCGCATTCTTTTTCACTCTAACAGGATCAGTCAAGCATTGGTTTGAAAGGTTGAAAAGGATCCATCAACTCTTTCAAGGAATTAGCCCGAGCATTCCTTGCACAGCTCATGGGAGCCAGAGACAGCGCAAGCCTCACATCAACCTCTTAACAGTCAAACAACAGCCAGGTGAGAGCTTGTGTGATTATATAACGCGTTTTAACGACGAAGCACTGCAGGTTGAGGGATACAGTGAGGGAGCAGCCCTAGTAGCCATCACAGCCGGACTAAAAGATGAGAGACTTCTTAATTCGATGGGTTTTTTAGAAAACTAAAGAAAAAATTGAAAAAAATTAGAAAAAAAAGGTTATTTTGAAACTAATTAGATATATGGGGTGTCGCATCTCTTTGAGATACGCGACACCCCTCCAGGTATGCTTTTTTTTTACTTTTTTTATTTTTTTAATAGATTAATAAATTAATAAATTAATGTATTATTATTATTATTATATTAAATTAATTTGGTTTAATAATTATGTTTTTTTTTTTTATAAATATTAGTTTTCATTTTTTTTTTTTGGAATCCGATGATTAAGTTTCTAAATGATTTTTTTTTTTAATTTAAAGTTTGCATTTTTTAATATATATCTACATGTTTTGAAGTTTGCATTTTCTTTTTGGTGTCTATATCATTTTTTTAATACAAAACATTACATATTAAATAGAATAGATTTTTCGAAAATTGTACATTAGTTTTACGAATTTTTCGAAAATTGTATATTAGTTTCATGAATTTTTTGATAAAACTTTATATAGTTAAAACATAATTAAATTGCATAAATAGAAAACACAATTACATTTTAAAAACTAACCATCCTTAAACAACTCCAATTCAATTTCAAGTACAGTTAATTTTAAAATCGATAATCAATTCACGAATGAGTTGTCACAAGTATTTTAACAATATCTTTCTCAAGTGAAACATATTTATATTTAAAAAAAAATGATTACAAAGCAAATTGAGAGCTTTTATTTCAAATCTATTATTGTTAGAAACAACTATTAACATATTTTAAAACATTTTAACTTCATCTCAATAATTAGATTAGACAAATTCTACAACGACAACTTTCTTTTTTCTTTCTGTTAAGAATAATGACTAGCAATTTTAGTAAACTATATAATTAATTTAGATTAGCGATTCATTGCATTATATTATAAATTCATATATATTTATTTTAAATGCAAGTAAAAATAAGTATTATCTTAAATGGACTAATACAAGTAAAAATCCATATACTTATTTTTAAATTAATTGTACTTGAAATTGAATTGAAGTTGTTTAAGGATGATTAGTTTTAAAAACGTAATTGTGTTTTCTATCTATACATAAATTTAATTATGGTTTAACTATATACAATTTTATCGAAAAATTCGTGAAACTAATATACAATTTTCGAAAAATTCGTGAAACTAATGTACAATTTTTGAAAAATCTATTTGTAACATCAGTTGAATTAAAGATGTGATATTTTGTATTAAATGATATAGACAACAAAAAGAAAATGCAAACTTTAAAACATGTAAATTACGGATATATATTAAAAAAATGCAAACTTTAAAATAAATAAAAAATCATTAAGAAATATAATCATCGGGTTCATCATACTAATATTTATTAAAAAAAACATAATTATTAAACAAAATTAATTTAATTTAATAATAATAATAATAATAAATTAATTTATTAATTTAATAATGTATTAAAAAAAAAGAAAAAAAAAGCAAACCTGGTGAGAGAAAAGGGGTGTCGCGTCTCTCAAAGAGACGCAACACCCCATATATCTAATTAGTTTCAAAAAAACCTTTTTTTTCTAATTTTTTTCAATTTTTTCTTTAGTTTTCTAAAAAACCCTAATTCGATAGGTAAGAGCCAACCTCAAACCTATGCAGAGTTTGTTTCCCGAACACAGAAATACATGAGCGCAGAGGAATTGCTCAAGTCAAAGAAGTTAGAACGAGAACACAAGAGGTCTCTTCATCTGACCACGACAATAAGAAAGACAAAAAGCAGCGGACAGACGAAGGAGGCCGAGGCCGACCAGACCGAGGAGACCACTTGAAGAAGTTTGAAAAGTACACCCCTACTTCAATCCCACAGGATCTGATCTTGATGGAGATACGGAATACAAACCTGCTCAATGTGCCTAGAAAGTTGAAGTCAAATCCTGATAACAGAGACAAAAGTCAGTATTGTCTCTTCCATCGAGATCACGGACATTCAACTAGGAACTACATTCAGCAAAAGGACGAAATTGAAGCTCTGATTCGGAACGGATACCTGAAGGAGTTCACCACAAAGGTCGAGGCAGACCAGAGATGGCCGAGGCCGACCAGAGATGACCTAGGCAAAGATGATGGTGAACCTCCTCTAGTAATGCATTGA
mRNA sequence
ATGGATCATAATTTTTCCAGGATACTTCGTATCTTGGATAAACCTGGTCCTAGCACTAAAACCCATGATGAGAGGTTGATTAGGGATCCGAGGAAGGGGAAAGAGCCCATGGAGCATAGTGTAGAATCAGGGACGAGATCGAAGGGAAAGAAAACTGACAGCATGACCAGCAAGGTCAGGGGGCTCAGACCTACAGATCGTACAATTCTGAGGAGCCCAGAACCAAGCACACTAAAGGGACAAGTGCCAAAATTTCCGAGGTCGAGGCCAGAGCTGCTGAAGCTGGCCAGGGCTGCTGAGGCCAAGAAGAACAATCAGGGAGACCTGCAGAAGCTAAAGGACTCGGGAGAGCAAGACCTGGAAGAACTAATCGACCAGGTCGACCCGCCCTTCACGAAAGAAGTCATGAAAGCTGAGGTACCCCAGAAGTTCAAGGTACCTGCATTCAAACCATATGATGGCAATAAAGACCCCGTGCAGCATCTAAATGCCTACAAAAGCTGGATGGACTTCCACGGCGTCTCAGATGCAATCAGGTGTCGCGCATTCTTTTTCACTCTAACAGGATCAGTCAAGCATTGGTTTGAAAGGTTGAAAAGGATCCATCAACTCTTTCAAGGAATTAGCCCGAGCATTCCTTGCACAGCTCATGGGAGCCAGAGACAGCGCAAGCCTCACATCAACCTCTTAACAGTCAAACAACAGCCAGGTGAGAGCTTGTGTGATTATATAACGCGTTTTAACGACGAAGCACTGCAGGTTGAGGGATACAGTGAGGGAGCAGCCCTAGTAGCCATCACAGCCGGACTAAAAGATGAGAGACTTCTTAATTCGATGGAAATACATGAGCGCAGAGGAATTGCTCAAGTCAAAGAAGTTAGAACGAGAACACAAGAGGTCTCTTCATCTGACCACGACAATAAGAAAGACAAAAAGCAGCGGACAGACGAAGGAGGCCGAGGCCGACCAGACCGAGGAGACCACTTGAAGAAGTTTGAAAAGTACACCCCTACTTCAATCCCACAGGATCTGATCTTGATGGAGATACGGAATACAAACCTGCTCAATGTGCCTAGAAAGTTGAAGTCAAATCCTGATAACAGAGACAAAAGTCAGTATTGTCTCTTCCATCGAGATCACGGACATTCAACTAGGAACTACATTCAGCAAAAGGACGAAATTGAAGCTCTGATTCGGAACGGATACCTGAAGGAGTTCACCACAAAGGTCGAGGCAGACCAGAGATGGCCGAGGCCGACCAGAGATGACCTAGGCAAAGATGATGGTGAACCTCCTCTAGTAATGCATTGA
Coding sequence (CDS)
ATGGATCATAATTTTTCCAGGATACTTCGTATCTTGGATAAACCTGGTCCTAGCACTAAAACCCATGATGAGAGGTTGATTAGGGATCCGAGGAAGGGGAAAGAGCCCATGGAGCATAGTGTAGAATCAGGGACGAGATCGAAGGGAAAGAAAACTGACAGCATGACCAGCAAGGTCAGGGGGCTCAGACCTACAGATCGTACAATTCTGAGGAGCCCAGAACCAAGCACACTAAAGGGACAAGTGCCAAAATTTCCGAGGTCGAGGCCAGAGCTGCTGAAGCTGGCCAGGGCTGCTGAGGCCAAGAAGAACAATCAGGGAGACCTGCAGAAGCTAAAGGACTCGGGAGAGCAAGACCTGGAAGAACTAATCGACCAGGTCGACCCGCCCTTCACGAAAGAAGTCATGAAAGCTGAGGTACCCCAGAAGTTCAAGGTACCTGCATTCAAACCATATGATGGCAATAAAGACCCCGTGCAGCATCTAAATGCCTACAAAAGCTGGATGGACTTCCACGGCGTCTCAGATGCAATCAGGTGTCGCGCATTCTTTTTCACTCTAACAGGATCAGTCAAGCATTGGTTTGAAAGGTTGAAAAGGATCCATCAACTCTTTCAAGGAATTAGCCCGAGCATTCCTTGCACAGCTCATGGGAGCCAGAGACAGCGCAAGCCTCACATCAACCTCTTAACAGTCAAACAACAGCCAGGTGAGAGCTTGTGTGATTATATAACGCGTTTTAACGACGAAGCACTGCAGGTTGAGGGATACAGTGAGGGAGCAGCCCTAGTAGCCATCACAGCCGGACTAAAAGATGAGAGACTTCTTAATTCGATGGAAATACATGAGCGCAGAGGAATTGCTCAAGTCAAAGAAGTTAGAACGAGAACACAAGAGGTCTCTTCATCTGACCACGACAATAAGAAAGACAAAAAGCAGCGGACAGACGAAGGAGGCCGAGGCCGACCAGACCGAGGAGACCACTTGAAGAAGTTTGAAAAGTACACCCCTACTTCAATCCCACAGGATCTGATCTTGATGGAGATACGGAATACAAACCTGCTCAATGTGCCTAGAAAGTTGAAGTCAAATCCTGATAACAGAGACAAAAGTCAGTATTGTCTCTTCCATCGAGATCACGGACATTCAACTAGGAACTACATTCAGCAAAAGGACGAAATTGAAGCTCTGATTCGGAACGGATACCTGAAGGAGTTCACCACAAAGGTCGAGGCAGACCAGAGATGGCCGAGGCCGACCAGAGATGACCTAGGCAAAGATGATGGTGAACCTCCTCTAGTAATGCATTGA
Protein sequence
MDHNFSRILRILDKPGPSTKTHDERLIRDPRKGKEPMEHSVESGTRSKGKKTDSMTSKVRGLRPTDRTILRSPEPSTLKGQVPKFPRSRPELLKLARAAEAKKNNQGDLQKLKDSGEQDLEELIDQVDPPFTKEVMKAEVPQKFKVPAFKPYDGNKDPVQHLNAYKSWMDFHGVSDAIRCRAFFFTLTGSVKHWFERLKRIHQLFQGISPSIPCTAHGSQRQRKPHINLLTVKQQPGESLCDYITRFNDEALQVEGYSEGAALVAITAGLKDERLLNSMEIHERRGIAQVKEVRTRTQEVSSSDHDNKKDKKQRTDEGGRGRPDRGDHLKKFEKYTPTSIPQDLILMEIRNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNYIQQKDEIEALIRNGYLKEFTTKVEADQRWPRPTRDDLGKDDGEPPLVMH
Homology
BLAST of Spg028561 vs. NCBI nr
Match:
XP_022158830.1 (uncharacterized protein LOC111025293 [Momordica charantia])
HSP 1 Score: 251.5 bits (641), Expect = 1.3e-62
Identity = 156/412 (37.86%), Postives = 228/412 (55.34%), Query Frame = 0
Query: 26 LIRDPRKGKEPMEHSVESGTRSKGKK-----TDSMTSKVRGLRPTDRTILRSPEPSTLKG 85
L+RDP+KGK P E E T S G K +++ R T + +SP P+ G
Sbjct: 74 LVRDPKKGKGPTESDTEESTNSVGSKLRIGGNTRQRTRIFDPRKTKKQ-HKSPAPN---G 133
Query: 86 QVPKFPRSRPELLKLARAAEAKKNNQGDLQKLKDSGEQDLEELIDQVDPPFTKEVMKAEV 145
E + L + A + + + DLEEL+DQ D PFT+E+M+ +V
Sbjct: 134 GKSDHDDRNSEPISLDKGKPADRPESSEKRHSHKEKGFDLEELLDQADSPFTEEIMREKV 193
Query: 146 PQKFKVPAFKPYDGNKDPVQHLNAYKSWMDFHGVSDAIRCRAFFFTLTGSVKHWFERLKR 205
P KFK+P K +D DPV HL+AY+ WMD +GVS+A+RCR F TL GS + WF +LKR
Sbjct: 194 PPKFKLPTVKQFDXTTDPVDHLDAYREWMDIYGVSEAVRCRVFSTTLNGSARIWFRQLKR 253
Query: 206 -IHQLFQGISPSIPCTAHGSQRQRKPHINLLTVKQQPGESLCDYITRFNDEALQVEGYSE 265
F+ ++ + G + + +P LLT+KQ+ ESL DY+ RFN+E LQVEG ++
Sbjct: 254 GSISSFKSLARAFVTQFVGGRCRSRPVAYLLTIKQRTTESLRDYVARFNEEKLQVEGLTD 313
Query: 266 GAALVAITAGLKDERLLNSMEIHERRGIAQVKEVRTRTQEVSSS--------DHDNKK-- 325
+L+A +G++DE L S +R E +R Q S+ + D K+
Sbjct: 314 AVSLLAFMSGVRDEHLSFSF---GKRTPNTFSEALSRAQRYMSAGEFFYSKREPDGKRTD 373
Query: 326 -------DKKQRTDEGGRGRPDRGDHLKKFEKYTPTSIPQDLILMEIRNTNLLNVPRKLK 385
DK Q + R R + D +KFEKYTPT++P + +LMEI++ LL P ++K
Sbjct: 374 PKRERSGDKPQGSRWEKRDRSSQKDPPRKFEKYTPTTVPIEQVLMEIKDQRLLKWPERMK 433
Query: 386 SNPDNRDKSQYCLFHRDHGHSTRNYIQQKDEIEALIRNGYLKEFTTKVEADQ 415
++ R K +YCLFHRDHGH+T++ K+E+E LIR GYLKE+ + +A Q
Sbjct: 434 ASSAKRSKGRYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEEPKATQ 478
BLAST of Spg028561 vs. NCBI nr
Match:
XP_024041095.1 (uncharacterized protein LOC112098853 [Citrus clementina])
HSP 1 Score: 193.0 bits (489), Expect = 5.5e-45
Identity = 129/385 (33.51%), Postives = 205/385 (53.25%), Query Frame = 0
Query: 87 RSRPELLK--LARAAEAKKNNQGDLQKLKDSGEQ--DLEELIDQVDPPFTKEVMKAEVPQ 146
RSR + + L + E + Q +Q+L+ + L+++ + +PPFT ++M A+ P
Sbjct: 129 RSRRRMTREVLNQGEEVDRGLQERMQRLEQMVREMGPLDDVTAEHEPPFTSDIMVAKYPP 188
Query: 147 KFKVPAFKPYDGNKDPVQHLNAYKSWMDFHGVSDAIRCRAFFFTLTGSVKHWFERLKRIH 206
+F +P +PYDG +DP +HL Y++ M+ G S AI CRAF TL G+ + WF RL+ H
Sbjct: 189 RFHLPQMEPYDGQRDPTEHLELYRTLMEVQGASQAILCRAFPLTLVGAARRWFRRLQP-H 248
Query: 207 QLFQGISPSIPCTAH-GSQRQR-KPHINLLTVKQQPGESLCDYITRFNDEALQVEGYSEG 266
+ S T+H S RQR KP LLTVKQQ GE+L DYI R+N+E QV+GY +G
Sbjct: 249 SISSFGDLSREFTSHFRSARQRGKPVTYLLTVKQQEGETLRDYIRRYNNEITQVDGYDDG 308
Query: 267 AALVAITAGLKDERLLNSMEIHERRGIAQVKEVRTRTQEVSSSDH----------DNKKD 326
AL I GL+ +L S+ +R E+ R ++ ++++ ++ K
Sbjct: 309 IALSGIMEGLRMGKLWWSV---SKRPPTSYSEMLARAEKYANAEERFKNRNQEKGESTKG 368
Query: 327 KKQRTDEGGRG--RPD-------------------RGDHLKKFEKYTPTSIPQDLILMEI 386
KK++ D+ R RPD R +F +T + P++ ILM++
Sbjct: 369 KKKKDDQRERRVVRPDQSLRRNQFRPGERSEVRDTRPRLASQFTNFTELNTPREQILMQV 428
Query: 387 RNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNYIQQKDEIEALIRNGYLKEFT-- 431
RN L P +K+NP R+ ++YC FH+DHGH T + K++IE+L+R G L+E+
Sbjct: 429 RNPTLFRTPPPMKTNPSRRNPNKYCHFHKDHGHDTSECFELKEQIESLVRQGQLQEYVRN 488
BLAST of Spg028561 vs. NCBI nr
Match:
XP_030959077.1 (uncharacterized protein LOC115981028 [Quercus lobata])
HSP 1 Score: 191.0 bits (484), Expect = 2.1e-44
Identity = 124/372 (33.33%), Postives = 192/372 (51.61%), Query Frame = 0
Query: 65 TDRTILRSPEPSTLKGQVPKFPRSRPELLKL------ARAAEAKKNNQGDLQKLKDSGEQ 124
T+R +PE S + + + S P L L A K+ + + LK
Sbjct: 62 TERRERENPEDSNIPSRQERQNESLPSLTDLTPPPIIAEMQAMKEQMEVMMNALKGRVSS 121
Query: 125 DLEELIDQVDPPFTKEVMKAEVPQKFKVPAFKPYDGNKDPVQHLNAYKSWMDFHGVSDAI 184
DL++L+++ D PFT V + +P KF++P + YDG DP+ HL +K+ M GV D I
Sbjct: 122 DLDDLVNRTDSPFTASVNSSPLPPKFRMPQIESYDGVNDPLDHLETFKTLMHLQGVPDEI 181
Query: 185 RCRAFFFTLTGSVKHWFERL-KRIHQLFQGISPSIPCTAHGSQRQRKPHINLLTVKQQPG 244
CRAF TL G + WF RL F+ +S G ++ L+++KQ+
Sbjct: 182 MCRAFPTTLKGPARVWFSRLTPNSINTFKELSAQFTSHFIGGHWYKRSTACLMSIKQRED 241
Query: 245 ESLCDYITRFNDEALQVEGYSEGAALVAITAGLKDERLLNSMEIHERRGIAQVKEVRTRT 304
E+L YITRFN EAL ++ + + A T+GL+ + L S+ ++ + +A V T+
Sbjct: 242 ETLRAYITRFNKEALSIDEADDKILVAAFTSGLRKGKFLFSLYKNDPKTMADVLYKATKY 301
Query: 305 QEVSSS--DHDNKKDKKQRTDE--GGRGRP------DRGD-HLK----KFEKYTPTSIPQ 364
V + H+ K K++R ++ RGR R + H + +F +TP + P
Sbjct: 302 MNVEDALLAHEEKPKKRERQEDMLQDRGRKVVRTGYQRDERHFRPPTGRFTNFTPLTAPI 361
Query: 365 DLILMEIRNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNYIQQKDEIEALIRNGY 415
D +LM+I++ L P KLK +P+ R + +YC FHRDHGH T NY K +IEALIR G
Sbjct: 362 DQVLMQIKDEGALTFPGKLKGDPNKRPRDKYCRFHRDHGHDTANYYDLKQQIEALIRQGK 421
BLAST of Spg028561 vs. NCBI nr
Match:
MQL77781.1 (hypothetical protein [Colocasia esculenta])
HSP 1 Score: 185.7 bits (470), Expect = 8.8e-43
Identity = 131/412 (31.80%), Postives = 204/412 (49.51%), Query Frame = 0
Query: 36 PMEHSVESGTRSKGKKTDSMTSKVRGLRPTDRTILRSPEPSTLKGQVPKFPRSRP----- 95
P E +S RS ++ + RG P P S ++G R P
Sbjct: 148 PQEQQADSPRRSHRAPSEERAPERRGRSPRHSVASPRPPRSVVEGNSHASGRGGPTNSEQ 207
Query: 96 ELL-KLARAAEAKKNNQGDLQKLKDSGEQDLEELIDQVDPPFTKEVMKAEVPQKFKVPAF 155
EL +L R + ++ +Q+ + G+ E+ +D PF++E+++A+V K +P
Sbjct: 208 ELARRLRRVVDLERRMDAMVQRAE--GKTPAEDDLD-FRSPFSREILEAQVSSKLPLPTI 267
Query: 156 KPYDGNKDPVQHLNAYKSWMDFHGVSDAIRCRAFFFTLTGSVKHWFERL-----KRIHQL 215
PYDG DPV H++ ++S M FHG SDA +CRAF TL + + W E L HQL
Sbjct: 268 APYDGTTDPVDHIHGFESHMVFHGASDAAKCRAFPATLKETARAWLETLPAGSITSFHQL 327
Query: 216 FQGISPSIPCTAHGSQRQRKPHINLLTVKQQPGESLCDYITRFNDEALQVEGYSEGAALV 275
+ + G + Q + +LL V+Q+ GE+L D++ RF EAL++ A
Sbjct: 328 KKSFWDNF----LGGRSQPRTAASLLAVRQKKGEALWDFVKRFRTEALRISHLDVPLATS 387
Query: 276 AITAGLKDERLLNSMEIHERRGIAQVKEVRTR------TQEVSSSDHDNKKDKKQRTDEG 335
A+ G +D L ++ + + +A++ + R + S+++ + DKK+ +D G
Sbjct: 388 ALIQGTRDGFLQRTLGVQQPTTLAELLSIAQRHAACEESLAASTAEQGEQSDKKRPSDNG 447
Query: 336 -------GRGRPDRGDHLKKFEKYTPTSIPQDLILMEIRNTNLLNVPRKLKSNPDNRDKS 395
GR D L+ F YTP ++ + IL EIRN L P++++S+P RD++
Sbjct: 448 SDRDRKKGRRNGDSPRRLRPFTNYTPLTVAPEQILAEIRNEAFLRWPQRMRSDPRKRDQN 507
Query: 396 QYCLFHRDHGHSTRNYIQQKDEIEALIRNGYLKEFTTKVEADQRWPRPTRDD 424
+YC FHRDHGH T Q KDEIE LI+ GYL F + E RP R D
Sbjct: 508 KYCRFHRDHGHDTSECRQLKDEIEDLIKRGYLGRFVRRNE-----ERPRRRD 547
BLAST of Spg028561 vs. NCBI nr
Match:
XP_030941654.1 (uncharacterized protein LOC115966587 [Quercus lobata])
HSP 1 Score: 184.9 bits (468), Expect = 1.5e-42
Identity = 113/341 (33.14%), Postives = 179/341 (52.49%), Query Frame = 0
Query: 109 LQKLKDSGEQDLEELIDQVDPPFTKEVMKAEVPQKFKVPAFKPYDGNKDPVQHLNAYKSW 168
+ LK DL++L+++ D PFT V + +P KF++P + YDG KDP+ HL +K+
Sbjct: 12 MNALKGRVSSDLDDLVNRTDSPFTASVNSSPLPPKFRMPQIESYDGVKDPLDHLETFKTL 71
Query: 169 MDFHGVSDAIRCRAFFFTLTGSVKHWFERL-KRIHQLFQGISPSIPCTAHGSQRQRKPHI 228
M GV D I CRAF TL G + WF RL F+ +S G R ++
Sbjct: 72 MHLQGVPDEIMCRAFPTTLKGPARVWFSRLTPNSINTFKELSAQFTSHFIGGHRYKRSTA 131
Query: 229 NLLTVKQQPGESLCDYITRFNDEALQVEGYSEGAALVAITAGLKDERLLNSMEIHERRGI 288
L+++KQ+ E+L YITRFN EAL ++ + + T+GL+ + L S+ ++ + +
Sbjct: 132 CLMSIKQREDETLRAYITRFNKEALSIDEADDKILVATFTSGLRKGKFLFSLYKNDPKTM 191
Query: 289 AQVKEVRTRTQEVSSS----DHDNKKDKKQRTDEGGRGRP-----DRGDHLK------KF 348
A V T+ + + KK ++Q RGR D+ D + +F
Sbjct: 192 ADVLYRATKYMNAEDALLAREEKPKKRERQEDMRQDRGRKVARTGDQRDERRFRPPTGRF 251
Query: 349 EKYTPTSIPQDLILMEIRNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNYIQQKD 408
+TP + P D +LM+I++ L P KLK +P+ R + +YC FHRDHGH T N K
Sbjct: 252 TNFTPLTAPIDQVLMQIKDEGALTFPGKLKGDPNKRPRDKYCRFHRDHGHDTANCYDLKQ 311
Query: 409 EIEALIRNGYLKEFTTKVEADQRWPRPTRDDLGKDDGEPPL 434
+IEALIR G L++F ++ + D++ + R + + PP+
Sbjct: 312 QIEALIRQGKLQKFVSREKTDKQEEQTPRRE--NERPRPPI 350
BLAST of Spg028561 vs. ExPASy TrEMBL
Match:
A0A6J1DWY0 (uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025293 PE=4 SV=1)
HSP 1 Score: 251.5 bits (641), Expect = 6.3e-63
Identity = 156/412 (37.86%), Postives = 228/412 (55.34%), Query Frame = 0
Query: 26 LIRDPRKGKEPMEHSVESGTRSKGKK-----TDSMTSKVRGLRPTDRTILRSPEPSTLKG 85
L+RDP+KGK P E E T S G K +++ R T + +SP P+ G
Sbjct: 74 LVRDPKKGKGPTESDTEESTNSVGSKLRIGGNTRQRTRIFDPRKTKKQ-HKSPAPN---G 133
Query: 86 QVPKFPRSRPELLKLARAAEAKKNNQGDLQKLKDSGEQDLEELIDQVDPPFTKEVMKAEV 145
E + L + A + + + DLEEL+DQ D PFT+E+M+ +V
Sbjct: 134 GKSDHDDRNSEPISLDKGKPADRPESSEKRHSHKEKGFDLEELLDQADSPFTEEIMREKV 193
Query: 146 PQKFKVPAFKPYDGNKDPVQHLNAYKSWMDFHGVSDAIRCRAFFFTLTGSVKHWFERLKR 205
P KFK+P K +D DPV HL+AY+ WMD +GVS+A+RCR F TL GS + WF +LKR
Sbjct: 194 PPKFKLPTVKQFDXTTDPVDHLDAYREWMDIYGVSEAVRCRVFSTTLNGSARIWFRQLKR 253
Query: 206 -IHQLFQGISPSIPCTAHGSQRQRKPHINLLTVKQQPGESLCDYITRFNDEALQVEGYSE 265
F+ ++ + G + + +P LLT+KQ+ ESL DY+ RFN+E LQVEG ++
Sbjct: 254 GSISSFKSLARAFVTQFVGGRCRSRPVAYLLTIKQRTTESLRDYVARFNEEKLQVEGLTD 313
Query: 266 GAALVAITAGLKDERLLNSMEIHERRGIAQVKEVRTRTQEVSSS--------DHDNKK-- 325
+L+A +G++DE L S +R E +R Q S+ + D K+
Sbjct: 314 AVSLLAFMSGVRDEHLSFSF---GKRTPNTFSEALSRAQRYMSAGEFFYSKREPDGKRTD 373
Query: 326 -------DKKQRTDEGGRGRPDRGDHLKKFEKYTPTSIPQDLILMEIRNTNLLNVPRKLK 385
DK Q + R R + D +KFEKYTPT++P + +LMEI++ LL P ++K
Sbjct: 374 PKRERSGDKPQGSRWEKRDRSSQKDPPRKFEKYTPTTVPIEQVLMEIKDQRLLKWPERMK 433
Query: 386 SNPDNRDKSQYCLFHRDHGHSTRNYIQQKDEIEALIRNGYLKEFTTKVEADQ 415
++ R K +YCLFHRDHGH+T++ K+E+E LIR GYLKE+ + +A Q
Sbjct: 434 ASSAKRSKGRYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEEPKATQ 478
BLAST of Spg028561 vs. ExPASy TrEMBL
Match:
A0A7N2N9G0 (Reverse transcriptase OS=Quercus lobata OX=97700 PE=4 SV=1)
HSP 1 Score: 193.7 bits (491), Expect = 1.6e-45
Identity = 138/420 (32.86%), Postives = 206/420 (49.05%), Query Frame = 0
Query: 39 HSVESGTRSKGKKTDSMTSKVRGLRPTDRTILRSPEPSTLKGQVPKFPRSRPEL------ 98
H +E R K ++ + G DR P+ S + + S P L
Sbjct: 400 HDLEEQLRQKNAAPNNQGADQEG-TSADRRNQEGPQASNAPSKPERQNTSIPSLAEIAPP 459
Query: 99 LKLARAAEAKKNNQGDLQKLKDSGEQDLEELIDQVDPPFTKEVMKAEVPQKFKVPAFKPY 158
L +A K+ + + LK DL++L+++ D PFT V +P KF++P Y
Sbjct: 460 LVIAEMQAMKEQMEVMMNALKGRVSSDLDDLVNRTDSPFTATVNSYPLPSKFRMPQIDSY 519
Query: 159 DGNKDPVQHLNAYKSWMDFHGVSDAIRCRAFFFTLTGSVKHWFERL-KRIHQLFQGISPS 218
DG KDP+ HL +K+ M GV+DAI CRAF TL G+ + WF RL F+ +S
Sbjct: 520 DGVKDPLDHLETFKTLMHLQGVADAIMCRAFPTTLKGAARIWFSRLAPNSIGTFKELSAQ 579
Query: 219 IPCTAHGSQRQRKPHINLLTVKQQPGESLCDYITRFNDEALQVEGYSEGAALVAITAGLK 278
G R +K L+++KQ+ E+L YI+RFN EAL V+ + + A T GLK
Sbjct: 580 FTAHFIGGHRYKKSTACLMSMKQREDETLRAYISRFNKEALSVDEADDKILVAAFTNGLK 639
Query: 279 DERLLNSMEIHERRGIAQV----------------KEVRTRTQEVSSSDHDNKKDKKQRT 338
+ L S+ ++ + +++V +E + R +E + ++ KK RT
Sbjct: 640 KGKFLFSLYKNDPKTMSEVLYRATKYMNAEDALLAREEKPRKRERQEDNRQDQGRKKTRT 699
Query: 339 D---EGGRGRPDRGDHLKKFEKYTPTSIPQDLILMEIRNTNLLNVPRKLKSNPDNRDKSQ 398
E R RP G +F +TP + P D +LM+I++ L P KLKS+P+ R + +
Sbjct: 700 GDRREERRPRPMGG----RFTSFTPLTAPVDQVLMQIKDEEALTFPGKLKSDPNKRSRDK 759
Query: 399 YCLFHRDHGHSTRNYIQQKDEIEALIRNGYLKEFTTKVEADQRWPRPTRDDLGKDDGEPP 433
YC FHRDHGH T + K +IEALIR G L+ F +K AD P +D + D E P
Sbjct: 760 YCRFHRDHGHDTADCYDLKQQIEALIRQGKLQRFVSKERADP----PAQDQHPRRDNERP 810
BLAST of Spg028561 vs. ExPASy TrEMBL
Match:
A0A7N2LNH8 (Ribonuclease H OS=Quercus lobata OX=97700 PE=4 SV=1)
HSP 1 Score: 191.8 bits (486), Expect = 5.9e-45
Identity = 120/339 (35.40%), Postives = 180/339 (53.10%), Query Frame = 0
Query: 109 LQKLKDSGEQDLEELIDQVDPPFTKEVMKAEVPQKFKVPAFKPYDGNKDPVQHLNAYKSW 168
+ LK DL++L+++ D PFT V +P KF++P+ YDG KDP+ HL +K+
Sbjct: 116 MSALKGRVSSDLDDLVNRTDSPFTAAVNSFPLPNKFRMPSMDSYDGVKDPLDHLETFKTL 175
Query: 169 MDFHGVSDAIRCRAFFFTLTGSVKHWFERL-KRIHQLFQGISPSIPCTAHGSQRQRKPHI 228
M GV+DAI CRAF TL G+ + WF R+ F+ +S G R +K
Sbjct: 176 MHLQGVADAIMCRAFPTTLKGAARIWFSRIAPNSISTFKELSAQFTTHFIGGHRYKKSTA 235
Query: 229 NLLTVKQQPGESLCDYITRFNDEALQVEGYSEGAALVAITAGLKDERLLNSMEIHERRGI 288
L+ +KQ+ E+L YI+RFN EAL ++ + + A T GLK + L S+ ++ + +
Sbjct: 236 CLMNIKQREEETLRAYISRFNKEALSIDEADDKILVAAFTNGLKGGKFLFSLYKNDPKTM 295
Query: 289 AQV-----KEVRTRTQEVSSSDHDNKKDKKQ--RTDEG---GRGRPDRGDHLKK-----F 348
++V K + +S D K+D+++ R D+G GR R D K F
Sbjct: 296 SEVLYRATKYMNAEDALLSREDRPKKRDRQEDSRQDQGRKKGRMGDRREDRRPKPMGGRF 355
Query: 349 EKYTPTSIPQDLILMEIRNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNYIQQKD 408
+TP + P D +LM+I++ L P KLKS+P R + +YC FHRDHGH T + K
Sbjct: 356 ASFTPLNAPIDQVLMQIKDEGSLTFPGKLKSDPSKRPRDKYCRFHRDHGHDTADCYDLKQ 415
Query: 409 EIEALIRNGYLKEFTTKVEADQRWPRPTRDDLGKDDGEP 432
+IEALIR G L++F K DQ P L +++ P
Sbjct: 416 QIEALIRQGKLQKFVNKGRTDQ---PPQEQHLRRENERP 451
BLAST of Spg028561 vs. ExPASy TrEMBL
Match:
A0A7N2MG20 (Ribonuclease H OS=Quercus lobata OX=97700 PE=4 SV=1)
HSP 1 Score: 191.8 bits (486), Expect = 5.9e-45
Identity = 120/339 (35.40%), Postives = 180/339 (53.10%), Query Frame = 0
Query: 109 LQKLKDSGEQDLEELIDQVDPPFTKEVMKAEVPQKFKVPAFKPYDGNKDPVQHLNAYKSW 168
+ LK DL++L+++ D PFT V +P KF++P+ YDG KDP+ HL +K+
Sbjct: 116 MSALKGRVSSDLDDLVNRTDSPFTAAVNSFPLPNKFRMPSMDSYDGVKDPLDHLETFKTL 175
Query: 169 MDFHGVSDAIRCRAFFFTLTGSVKHWFERL-KRIHQLFQGISPSIPCTAHGSQRQRKPHI 228
M GV+DAI CRAF TL G+ + WF R+ F+ +S G R +K
Sbjct: 176 MHLQGVADAIMCRAFPTTLKGAARIWFSRIAPNSISTFKELSAQFTTHFIGGHRYKKSTA 235
Query: 229 NLLTVKQQPGESLCDYITRFNDEALQVEGYSEGAALVAITAGLKDERLLNSMEIHERRGI 288
L+ +KQ+ E+L YI+RFN EAL ++ + + A T GLK + L S+ ++ + +
Sbjct: 236 CLMNIKQREEETLRAYISRFNKEALSIDEADDKILVAAFTNGLKGGKFLFSLYKNDPKTM 295
Query: 289 AQV-----KEVRTRTQEVSSSDHDNKKDKKQ--RTDEG---GRGRPDRGDHLKK-----F 348
++V K + +S D K+D+++ R D+G GR R D K F
Sbjct: 296 SEVLYRATKYMNAEDALLSREDRPKKRDRQEDSRQDQGRKKGRMGDRREDRRPKPMGGRF 355
Query: 349 EKYTPTSIPQDLILMEIRNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNYIQQKD 408
+TP + P D +LM+I++ L P KLKS+P R + +YC FHRDHGH T + K
Sbjct: 356 ASFTPLNAPIDQVLMQIKDEGSLTFPGKLKSDPSKRPRDKYCRFHRDHGHDTADCYDLKQ 415
Query: 409 EIEALIRNGYLKEFTTKVEADQRWPRPTRDDLGKDDGEP 432
+IEALIR G L++F K DQ P L +++ P
Sbjct: 416 QIEALIRQGKLQKFVNKGRTDQ---PPQEQHLRRENERP 451
BLAST of Spg028561 vs. ExPASy TrEMBL
Match:
A0A7N2N013 (Ribonuclease H OS=Quercus lobata OX=97700 PE=4 SV=1)
HSP 1 Score: 191.4 bits (485), Expect = 7.8e-45
Identity = 120/339 (35.40%), Postives = 179/339 (52.80%), Query Frame = 0
Query: 109 LQKLKDSGEQDLEELIDQVDPPFTKEVMKAEVPQKFKVPAFKPYDGNKDPVQHLNAYKSW 168
+ LK DL++L+++ D PFT V +P KF++P+ YDG KDP+ HL +K+
Sbjct: 116 MSALKGRVSSDLDDLVNRTDSPFTAAVNSFPLPSKFRMPSMDSYDGVKDPLDHLETFKTL 175
Query: 169 MDFHGVSDAIRCRAFFFTLTGSVKHWFERL-KRIHQLFQGISPSIPCTAHGSQRQRKPHI 228
M GV+DAI CRAF TL G+ + WF R+ F+ +S G R +K
Sbjct: 176 MHLQGVADAIMCRAFPTTLKGAARIWFSRIAPNSISTFKELSAQFTTHFIGGHRYKKSTA 235
Query: 229 NLLTVKQQPGESLCDYITRFNDEALQVEGYSEGAALVAITAGLKDERLLNSMEIHERRGI 288
L+ +KQ+ E+L YI+RFN EAL ++ + + A T GLK + L S+ ++ + +
Sbjct: 236 CLMNIKQREEETLRAYISRFNKEALSIDEADDKILVAAFTNGLKGGKFLFSLYKNDPKTM 295
Query: 289 AQV-----KEVRTRTQEVSSSDHDNKKDKKQ--RTDEG---GRGRPDRGDHLKK-----F 348
++V K + +S D K+D+ + R D+G GR R D K F
Sbjct: 296 SEVLYRATKYMNAEDALLSREDRPKKRDRPEDSRQDQGRKKGRMGDRREDRRPKPMSGRF 355
Query: 349 EKYTPTSIPQDLILMEIRNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNYIQQKD 408
+TP + P D +LM+I++ L P KLKS+P R + +YC FHRDHGH T + K
Sbjct: 356 ANFTPLNAPIDQVLMQIKDEGSLTFPGKLKSDPSKRSRDKYCRFHRDHGHDTADCYDLKQ 415
Query: 409 EIEALIRNGYLKEFTTKVEADQRWPRPTRDDLGKDDGEP 432
+IEALIR G L++F K DQ P L +++ P
Sbjct: 416 QIEALIRQGKLQKFVNKGRTDQ---PPQEQHLRRENERP 451
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DWY0 | 6.3e-63 | 37.86 | uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025... | [more] |
A0A7N2N9G0 | 1.6e-45 | 32.86 | Reverse transcriptase OS=Quercus lobata OX=97700 PE=4 SV=1 | [more] |
A0A7N2LNH8 | 5.9e-45 | 35.40 | Ribonuclease H OS=Quercus lobata OX=97700 PE=4 SV=1 | [more] |
A0A7N2MG20 | 5.9e-45 | 35.40 | Ribonuclease H OS=Quercus lobata OX=97700 PE=4 SV=1 | [more] |
A0A7N2N013 | 7.8e-45 | 35.40 | Ribonuclease H OS=Quercus lobata OX=97700 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |