Spg028541 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg028541
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold7: 12250839 .. 12253817 (-)
RNA-Seq Expression	Spg028541
Synteny	Spg028541

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGTGTCGATTGGGAGATCAAGAACGATCAAGAACGAGAATCTTGGAGCATCGTGCTGTATTCTTCGAAAATCCAAGTAAGTGTTCCTGATCTTGAATATATTTACAGCATGCTTAATCTTAGTAATTTAGAAATTGTTTCTAATTTTGTTGCCAACGTATTGGTTTTTCTGAAATTGAAATTTAATTCGAGATTGGTCTTGTTTGCTTCCGCTGCCAAAGGGATTTCAACCCTTCAACACCTTTAGGAGCCATTTGAATGCAAAGGAAATGGTTTAATTCTTGCTGTTTTTAGTTTAAAAGCATGCTAAGTAGGTTTCCATTAATTATCTTAGGCCCTAGTAGCATTGCCTAATCTCTAGGAGCCCTTAGAATTCTAAAATGTGACTTTTTACTTGCTGTCCAGCAGCTGAAAAGCCTTATCTGGGGCCATTCGGCGAATACCCATTGCCCGTTGTGCCTTAGACATGGTTGCCCATGGTCTAAAGGTTTTGGGTTTTTAATTGGGGGAATTTTGAGTGGTTTTCCAGCAAGGAAATAGTTCTTTCGCGATTGTGTAACGACCCTGTTGGTATAGAAAATTTTCTTCAAATAATTGTCGAAGTTCGTGAAATTAAAATATGCTAATTTCATGAAATTAAATTGAATTTGGTTTAATTTAAACCCAAATTCATTAAGGATATTGGGTCAAAAGCCCAAATGCATTTCAAGCCCAAACCCATGGATGAGCCCAAATGGATTTTAGGCCCAAGCCCATGGATGGGCCCAATTGCAACCAAGCCCAAGCCCAAGCCCACGGAGGCCTTTAGGAAACTCTATAAATAGGTGGCATGACTTTGTTGGGTTTAATGTCCTATAAACTCGTAGTTTGTAAATCATTAAACATATTCTATTTCCAATAAAGACGTTATTGAGGTTATTCAGTAAGAGATGTTATTGAATATGTAAATTGCAAATGATTAACCTAAATCCAATAAACTAAGATCCTTGGCTATAAAATGAATACTCGAACTATATGTAGAGACATATCGTAGGATCAAGTTCAAGTTTATAGCCAAAATAGTCTATAGTATAAGGATACGGTTGGGTGCCTTATCCTGGGGACACTATGGACGCGGCCCACTTTGTATTAAGTACAAACGATGAGATCCTAAATCGTTCATGTAGAGACATGCGAGTGGGGGCATCCTATGCAATGAGTTTGCATAAGACTGGACCACGAAATAAGTCAATTTCTCTTTATAACGCCGTTTACTGAAGAAACTGACTGTTTCTCATAGATGACCTAGGTAACTCGTTCTTAATCATGAGCTAACTATGAACTCCTGTTTATACGAGATTATCCTTTGATCTGCATGGGTGAGAGTGGCCAGCATCGCCGACTCAACAAGCCTACCATTTTGGGGATAAGATCGAATAGATAGCTGGGGACATAGTTTCGCAAGACGGAATTCACTCCTACCCATTTCAGGGATAGCAGAGAGGTTGTTCCCTTAAGTACTAACTCCAGGACTTGAACAAGGGGCCCCACCCTCTCGTTGGATCGAGAGGGACTTAGGTTTGATGGTTGGACCACAAACCGATTGTTCATTAGAGGATTAGTGGAACTTAAGGAACAAGAAGTACTATAGGGGTGAAACGGTTATTTGACCTAGCTATAGCTACGAACAACCTGTGAAGGAACGACTTACTGAACATGGTTAAATCAAGTGGACGTAAATATATCTATAGTGAGGGGAGTGCAACTATCGGGCTATAGTGGAGTGTCCCGGTAGTTAACGAATGTTGGCTAGCTTAGATAATGAGATTAGTCGGTTAGCCTCGAATCGTTGGAGCCCATGATCTATAGGTCCATTAGGTCCCTCTACTAGCTCATATTGTATTAATGCTTAGATCATAATGATAGGAATCTTTGAATCGTTCAAAAACGGGAAATAGGGCTTTATCGTAAAAATGTGTTTGACACAATTTTTAATTATGAATTAAATAAGGAATTGAGAGATAAGGTATTTAAAAGTGTTTTAAATACCATGTATATGTATTAGGAATCATATACTATTAATGGCACTAGGTAAGAATGATTAATTAGATTAATCATGATAAATTACTTGGAAATGTCTCAATTAATAACCTAGAAATCAAATTCAATTTCAAATTGAATTAGGGAAAATTGCAAGCTGAAAATTCAAGAATGAAGATTCAATTAAGTGGATTTAGTGGCATTCCCACTCTTGCATGTTGATGCATAGTGGAAAACAACACAACCATGCACTAGTTGCATGTGTTGTGAATTAAACACCTAGAATCCACTTTGAGTTGCATTTTCACCATGTGTCTAGTGTCATGAAGCTTGTCTTTGCATGGAAGAGGTCTTTATAAGGAACTTGAATCAAATTCAAAAGATAGAGAGCAATTTACCTACTGTTATGCTGCTGGTTTTTCCTCTCAAACACACACACTTCCATAGATCTCTCAAAAGCTTGTTCCTCCAAGCATTCCCTTCCCTTTCCTTATCACTATAGACTCCCACAAGTCATTCTAGGCAAGGAGAATAGTAGAGAAGACACTAAAGGTTGTCCAAGAGAAGTTGGAGAAGGAAAACATCACAAGGAGTTCCTCTCAAGTGAGCTACAAAGAGGTTGGTACTCCTTTACTTTCTGTTCTGTTTTCTAGAACATGCATGCTTTAGGTACAAAATTGAATGTCTTAAGTGCTTTCGATCTTCAATTGCTTCCGCATGTGTTATATGAAAACCTTCAGACTTCTCATTTGAGGAGGGCAAAAAGAAAGGAAGAAGAGAAAGCTCTCAGAAGAAACCGAAGATTGAAGCTCCTTCGGCAGAACCGAAGATCGAAGCTCAGATCCTCATCAAATCCAGCTGCAGAACTGAAGAACAAGGCTCCGATCATCTTCAAATCCCGACCCAGAACTGAACAACGAAGTCTAGATCCTCTTCAAATCCCGCTGCTGAATTGA

mRNA sequence

ATGGTGGTGTCGATTGGGAGATCAAGAACGATCAAGAACGAGAATCTTGGAGCATCGTGCTGTATTCTTCGAAAATCCAAACTCCCACAAGTCATTCTAGGCAAGGAGAATAGTAGAGAAGACACTAAAGGTTGTCCAAGAGAAGTTGGAGAAGGAAAACATCACAAGGAGTTCCTCTCAAGTACAAAATTGAATGTCTTAAGTGCTTTCGATCTTCAATTGCTTCCGCATGTGTTATATGAAAACCTTCAGACTTCTCATTTGAGGAGGGCAAAAAGAAAGGAAGAAGAGAAAGCTCTCAGAAGAAACCGAAGATTGAAGCTCCTTCGGCAGAACCGAAGATCGAAGCTCAGATCCTCATCAAATCCAGCTGCAGAACTGAAGAACAAGGCTCCGATCATCTTCAAATCCCGACCCAGAACTGAACAACGAAGTCTAGATCCTCTTCAAATCCCGCTGCTGAATTGA

Coding sequence (CDS)

ATGGTGGTGTCGATTGGGAGATCAAGAACGATCAAGAACGAGAATCTTGGAGCATCGTGCTGTATTCTTCGAAAATCCAAACTCCCACAAGTCATTCTAGGCAAGGAGAATAGTAGAGAAGACACTAAAGGTTGTCCAAGAGAAGTTGGAGAAGGAAAACATCACAAGGAGTTCCTCTCAAGTACAAAATTGAATGTCTTAAGTGCTTTCGATCTTCAATTGCTTCCGCATGTGTTATATGAAAACCTTCAGACTTCTCATTTGAGGAGGGCAAAAAGAAAGGAAGAAGAGAAAGCTCTCAGAAGAAACCGAAGATTGAAGCTCCTTCGGCAGAACCGAAGATCGAAGCTCAGATCCTCATCAAATCCAGCTGCAGAACTGAAGAACAAGGCTCCGATCATCTTCAAATCCCGACCCAGAACTGAACAACGAAGTCTAGATCCTCTTCAAATCCCGCTGCTGAATTGA

Protein sequence

MVVSIGRSRTIKNENLGASCCILRKSKLPQVILGKENSREDTKGCPREVGEGKHHKEFLSSTKLNVLSAFDLQLLPHVLYENLQTSHLRRAKRKEEEKALRRNRRLKLLRQNRRSKLRSSSNPAAELKNKAPIIFKSRPRTEQRSLDPLQIPLLN

Homology

The following BLAST results are available for this feature:

BLAST of Spg028541 vs.


Match Name	E-value	Identity	Description

BLAST of Spg028541 vs.


Match Name	E-value	Identity	Description

BLAST of Spg028541 vs.


Match Name	E-value	Identity	Description

BLAST of Spg028541 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 111..141

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg028541.1	Spg028541.1	mRNA