Spg027945 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg027945
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPMD domain-containing protein
Locationscaffold2: 39111618 .. 39112970 (+)
RNA-Seq ExpressionSpg027945
SyntenySpg027945
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTATAGAAGCTTACAGCCCTTGTCGATTCAGCCGTCAATTTGGCTTTCACCAGAATGTACCAAATGATTTACATAATGATCCTCCCCCGGTTAGCCTTGAGAATGTTTTTCATTCTTGGAGAATTTGTACTGCAACTTTGACTTTGTTGAAGGTATACCTCCCAGCGCGCCTACCAGATCCTCGTGATCAAACCACTCGATCTTATGATAAGTGGTGGTCGCAAAAACATGGGCGCTATTTGGAAGAAGGCATACAACTTTTAGTGAATAGTTTTACTATTCCTTCAACTAAGCCCAAACCTCATAAAGATCTGGATACCAAACAAGCTGGTAAGAGGGCGATTGAGGCGTCAACTCGTCCGACTTACAACCTTCGTGATGAAGAAGAAAGCCATAGTAGCAATGATGATCGTCATTGGAAAAGGCCAAAAAGGTAAAGAAATCATCCAACGATCAATCTTCGGTTGGCAACCCATCCTTTTTTTAAAACACATGCTGCAATTTCATTTACTTACTCTTGTATCCCTTCTTACTTTGCAGGTACCTTTGGAGGATCAATCATTAACAAGTCCCAATGTGTTTGCTTCTACCTCAAAGAATATTGGTTTCGTGTCAAAAAGCAAAGAAATCGTAATTTTGCATCCTCCCTCCACCGACAAGAATCCTCAACAAACTGGAGGGAAAAAACTATCCCAGCACCCGAAGTTTCTTATTTTTGTGCTGAGAACGTAATCTCTAACTTCTGACGACAGGCTGCTTTGTCAATGTGGAAAAGCATTCACGGGAAGATTGTACGTACCTCTTTTGAACACGTTGGTGACCTGGAGCAGGAGACGCTGAAAATATTTGGTGCAATGGTCGAAGCTAGTACAAATAATTTGGCGCCTCTACAAGAGTTTGTGGGCGGCTACTTCCAGAAACTGAGAGAATACCTTGGAATGCAATCTTCACTCTCTGCTTACCTAACTCCACAAATTAAAGATAGCCAATTGGAGGAAAAGAAGCTCCACTTAGAAAAGGCCTTATCTGTTGAAAGTCGTTTTGCTGAGGAGAAGGATGTACTTCAAAAGTGACTTGCTTGCTCTGTTTCAGAGGTTGCAAAATTAAAGGCCAAGGTCGGAGAATTAGAGGCCAAATTGAAAACTGCAGAGGCTGAGTCAGAAAAGCTTTCCAATTTGGTTTCTGAGAAGGAAAAGGACCTAGATCGAGAAAGGCTAGTGGTTTCACAAATACGCGAGGAGATTGGTAGTGTAGAGTGTGCCCCCACTATCAGCGCTTCAGATGTTCAATATCTATCGACACTCCGTGGACTTTTGGAGGGTACCCGCGATGAGCTGAAGGAACTTTAG

mRNA sequence

ATGACTATAGAAGCTTACAGCCCTTGTCGATTCAGCCGTCAATTTGGCTTTCACCAGAATGTACCAAATGATTTACATAATGATCCTCCCCCGGTTAGCCTTGAGAATGTTTTTCATTCTTGGAGAATTTGTACTGCAACTTTGACTTTGTTGAAGGTATACCTCCCAGCGCGCCTACCAGATCCTCGTGATCAAACCACTCGATCTTATGATAAGTGGTGGTCGCAAAAACATGGGCGCTATTTGGAAGAAGGCATACAACTTTTAGTGAATAGTTTTACTATTCCTTCAACTAAGCCCAAACCTCATAAAGATCTGGATACCAAACAAGCTGGTAAGAGGGCGATTGAGGCGTCAACTCGTCCGACTTACAACCTTCGTGATGAAGAAGAAAGCCATAGTAGCAATGATGATCGTCATTGGAAAAGGCCAAAAAGCATTCACGGGAAGATTGTACGTACCTCTTTTGAACACGTTGGTGACCTGGAGCAGGAGACGCTGAAAATATTTGGTGCAATGGTCGAAGCTAGTACAAATAATTTGGCGCCTCTACAAGAGTTTGTGGGCGGCTACTTCCAGAAACTGAGAGAATACCTTGGAATGCAATCTTCACTCTCTGCTTACCTAACTCCACAAATTAAAGATAGCCAATTGGAGGAAAAGAAGCTCCACTTAGAAAAGGCCTTATCTGTTGAAAGTCAGGTTGCAAAATTAAAGGCCAAGGTCGGAGAATTAGAGGCCAAATTGAAAACTGCAGAGGCTGAGTCAGAAAAGCTTTCCAATTTGGTTTCTGAGAAGGAAAAGGACCTAGATCGAGAAAGGCTAGTGGTTTCACAAATACGCGAGGAGATTGGTAGTGTAGAGTGTGCCCCCACTATCAGCGCTTCAGATGTTCAATATCTATCGACACTCCGTGGACTTTTGGAGGGTACCCGCGATGAGCTGAAGGAACTTTAG

Coding sequence (CDS)

ATGACTATAGAAGCTTACAGCCCTTGTCGATTCAGCCGTCAATTTGGCTTTCACCAGAATGTACCAAATGATTTACATAATGATCCTCCCCCGGTTAGCCTTGAGAATGTTTTTCATTCTTGGAGAATTTGTACTGCAACTTTGACTTTGTTGAAGGTATACCTCCCAGCGCGCCTACCAGATCCTCGTGATCAAACCACTCGATCTTATGATAAGTGGTGGTCGCAAAAACATGGGCGCTATTTGGAAGAAGGCATACAACTTTTAGTGAATAGTTTTACTATTCCTTCAACTAAGCCCAAACCTCATAAAGATCTGGATACCAAACAAGCTGGTAAGAGGGCGATTGAGGCGTCAACTCGTCCGACTTACAACCTTCGTGATGAAGAAGAAAGCCATAGTAGCAATGATGATCGTCATTGGAAAAGGCCAAAAAGCATTCACGGGAAGATTGTACGTACCTCTTTTGAACACGTTGGTGACCTGGAGCAGGAGACGCTGAAAATATTTGGTGCAATGGTCGAAGCTAGTACAAATAATTTGGCGCCTCTACAAGAGTTTGTGGGCGGCTACTTCCAGAAACTGAGAGAATACCTTGGAATGCAATCTTCACTCTCTGCTTACCTAACTCCACAAATTAAAGATAGCCAATTGGAGGAAAAGAAGCTCCACTTAGAAAAGGCCTTATCTGTTGAAAGTCAGGTTGCAAAATTAAAGGCCAAGGTCGGAGAATTAGAGGCCAAATTGAAAACTGCAGAGGCTGAGTCAGAAAAGCTTTCCAATTTGGTTTCTGAGAAGGAAAAGGACCTAGATCGAGAAAGGCTAGTGGTTTCACAAATACGCGAGGAGATTGGTAGTGTAGAGTGTGCCCCCACTATCAGCGCTTCAGATGTTCAATATCTATCGACACTCCGTGGACTTTTGGAGGGTACCCGCGATGAGCTGAAGGAACTTTAG

Protein sequence

MTIEAYSPCRFSRQFGFHQNVPNDLHNDPPPVSLENVFHSWRICTATLTLLKVYLPARLPDPRDQTTRSYDKWWSQKHGRYLEEGIQLLVNSFTIPSTKPKPHKDLDTKQAGKRAIEASTRPTYNLRDEEESHSSNDDRHWKRPKSIHGKIVRTSFEHVGDLEQETLKIFGAMVEASTNNLAPLQEFVGGYFQKLREYLGMQSSLSAYLTPQIKDSQLEEKKLHLEKALSVESQVAKLKAKVGELEAKLKTAEAESEKLSNLVSEKEKDLDRERLVVSQIREEIGSVECAPTISASDVQYLSTLRGLLEGTRDELKEL
Homology
BLAST of Spg027945 vs. NCBI nr
Match: XP_031745312.1 (uncharacterized protein LOC116405439 [Cucumis sativus])

HSP 1 Score: 157.1 bits (396), Expect = 2.4e-34
Identity = 141/519 (27.17%), Postives = 190/519 (36.61%), Query Frame = 0

Query: 3   IEAYSPCRFSRQFGFHQNVPNDLHNDPPPVSLENVFHSWRICTATLTLLKVYLPARLPDP 62
           IE YSPCRFSRQFGF+Q+VP DL  + P  +  NV + W IC    TL +VYLP   P+P
Sbjct: 479 IEPYSPCRFSRQFGFYQDVPYDLGEEIPEANFFNVRYCWMICIRENTLSQVYLPVSAPNP 538

Query: 63  RDQTTRSYDKWWSQKHGRYLEEGIQLLVNSFTIPSTKPKPHKDLD-----------TKQA 122
               T  Y  WW  KHG YL+EG+Q L++  T P  K K  K ++           + + 
Sbjct: 539 DTHVTSHYKVWWLAKHGDYLQEGVQHLIDRPTPPHIKSKTTKKIEHNFGSGNQKICSDET 598

Query: 123 GKRAIEASTRPTYNLRDE-----------------------------------EESHSSN 182
            +R +E     T  L D                                    E+S SSN
Sbjct: 599 DERLVEKIEGGTKRLVDNLSLSTRFKHLIKGGIDNVGKDNRLSIATKHPSKRIEDSQSSN 658

Query: 183 DDRHWKRPK--------------------------------------------------- 242
           DDRHWKRPK                                                   
Sbjct: 659 DDRHWKRPKKPNKQSIDDEESPIRVPDAAQFFDVPSPMVSFRLPFYLFIYCIFSPLLLLF 718

Query: 243 ------------------------------------------------------------ 302
                                                                       
Sbjct: 719 LVVNIILQSSLGDHDLHIEDTLESMPNLEDCNVVLSYNGNSKEPIGANIVSACPPVIKGP 778

Query: 303 -------------------------------------SIHGKIVRTSFEHVGDLEQETLK 317
                                                ++  KI+RT FE +  LE E  K
Sbjct: 779 PQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLSSLEPEMHK 838

BLAST of Spg027945 vs. NCBI nr
Match: KAA0050733.1 (uncharacterized protein E6C27_scaffold560G00370 [Cucumis melo var. makuwa] >TYJ95697.1 uncharacterized protein E5676_scaffold726G00240 [Cucumis melo var. makuwa])

HSP 1 Score: 155.6 bits (392), Expect = 7.1e-34
Identity = 124/396 (31.31%), Postives = 161/396 (40.66%), Query Frame = 0

Query: 1   MTIEAYSPCRFSRQFGFHQNVPNDLHNDPPPVSLENVFHSWRICTATLTLLKVYLPARLP 60
           M I   +PCRF RQFGF+Q+VP DL    P  +L NV + W IC    TL +VYLPA   
Sbjct: 321 MHIHKGNPCRFGRQFGFYQDVPYDLSEKIPKANLANVRYHWMICVRESTLSQVYLPAPTL 380

Query: 61  DPRDQTTRSYDKWWSQKHGRYLEEGIQLLVNSFTIPSTKPKPHKDLDTKQAGKRAIEAST 120
            P +  T  Y  WW  KHG YL+EG+Q L++  T    K K  K ++     K     + 
Sbjct: 381 HPCNHITSHYKAWWLAKHGDYLQEGLQNLIDRPTPSLIKSKTTKKIEHNPDKKICFSKTK 440

Query: 121 RP-----------------------TYNLRDE---EESHSSNDDRHWKRPK--------- 180
            P                       T + R     E+SHSSNDDRHWKRPK         
Sbjct: 441 EPVDAQFKFAARSGADNMHKDLLKLTTDKRPSTHTEDSHSSNDDRHWKRPKRPDKQSIDD 500

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 501 EKPPIEVPDVPMASPEDLSASENSKTPIGATIMSTCPLVTKASPQRVGGTEPITTSEISH 560

Query: 241 --------------------SIHGKIVRTSFEHVGDLEQETLKIFGAMVEASTNNLAPLQ 271
                               S+  KI+RT FE V  LE E  KIF A+  + +NNL  L+
Sbjct: 561 FCADNLISDLRQKTAITLWESLRQKIIRTPFERVSSLEPEMRKIFAAIATSGSNNLTFLK 620

BLAST of Spg027945 vs. NCBI nr
Match: KAA0053466.1 (hypothetical protein E6C27_scaffold190G00140 [Cucumis melo var. makuwa])

HSP 1 Score: 147.1 bits (370), Expect = 2.5e-31
Identity = 115/452 (25.44%), Postives = 192/452 (42.48%), Query Frame = 0

Query: 3   IEAYSPCRFSRQFGFHQNVPNDLHNDPPPVSLENVFHSWRICTATLTLLKVYLPARLPDP 62
           I +YSP RF RQFGF+Q++PND+   PP ++L+N+ + WRIC    TL ++YLP R  +P
Sbjct: 493 ITSYSPYRFGRQFGFYQDLPNDIGGMPPAITLDNILYHWRICMRRNTLSELYLPVRSLEP 552

Query: 63  RDQTTRSYDKWWSQKHGRYLEEGIQLLVNSFTIPSTKPKPHKDLDTKQAGK--RAIEAST 122
               T+ +  WW+ KH  Y E+    LV+S   P ++P+  K+  +   GK  R +EA  
Sbjct: 553 CKHVTQRFTDWWTTKHMNYFEDNRHHLVSSAIPPPSQPRLPKNRGSNLGGKEIRLVEAMA 612

Query: 123 RPTYNLRDEEESHSSNDDRHWKRP------------------------------------ 182
               +  +E ES S+  DRHWKRP                                    
Sbjct: 613 PNLEDEVNEHESDSNKSDRHWKRPLKKAKVSGDHPDGRGLSALEVPDVPPLSPLNDHLEG 672

Query: 183 -------KSIHG-KIVRTSFEHVG---------------------------------DLE 242
                  +S+ G   V ++FE VG                                 DLE
Sbjct: 673 LIEPDSDESLTGPHAVDSAFEEVGTSRTPVNKPAEQSLRPSTLLEEIRRGKMTVGGKDLE 732

Query: 243 QETLK------------------------------------------------IFGAMVE 302
             + K                                                +   + +
Sbjct: 733 SPSSKEGACPKASLQKVSSAHAPLKFSELPLGVSNKQTMRNPEPSQLRPEIATVLSGIEK 792

Query: 303 ASTNNLAPLQEFVGGYFQKLREYLGMQSSLSAYLTPQIKDSQLEEKKLHLEKALS----- 317
              + LA L+E++  Y +++  +  +QSS SA L+   K  QL EK   +++AL+     
Sbjct: 793 IHADGLASLEEYLNSYLKRVENFNDVQSSYSAQLSSTDKACQLNEKTSAIKEALTLVKQL 852

BLAST of Spg027945 vs. NCBI nr
Match: TYK06433.1 (hypothetical protein E5676_scaffold163G001360 [Cucumis melo var. makuwa])

HSP 1 Score: 145.2 bits (365), Expect = 9.6e-31
Identity = 116/473 (24.52%), Postives = 189/473 (39.96%), Query Frame = 0

Query: 3   IEAYSPCRFSRQFGFHQNVPNDLHNDPPPVSLENVFHSWRICTATLTLLKVYLPARLPDP 62
           I +YSP RF RQFGF+Q++PND+   PP ++L+N+ + WRICT   TL ++YL  R  +P
Sbjct: 508 ITSYSPYRFGRQFGFYQDLPNDIGGMPPAITLDNILYHWRICTRRNTLFELYLSVRSLEP 567

Query: 63  RDQTTRSYDKWWSQKHGRYLEEGIQLLVNSFTIPSTKPKPHKDLDTKQAGKR--AIEAST 122
               T+ +  WW+ KH  Y E+    LV+S   P ++P+  K+  +   GK+   +EA  
Sbjct: 568 CKHVTQRFTDWWTTKHMTYFEDNRHHLVSSAISPPSQPRLPKNRGSNLGGKKIGLVEAMA 627

Query: 123 RPTYNLRDE-----EESHSSNDDRHWKRP------------------------------- 182
               NL +E     +ES SS  DRHWKRP                               
Sbjct: 628 P---NLEEEVKEHKDESDSSKSDRHWKRPLKKAKVSGDHPDWFARLIEPDSDESLTGPHV 687

Query: 183 ------------------------------------------------------------ 242
                                                                       
Sbjct: 688 VDSAFEEVGTSKTPVNKPAEQSLRPSALFEEIRRGKMTVGGKDLESHSSKEGVCPKASLP 747

Query: 243 --------------------------------------------------KSIHGKIVRT 302
                                                             + I  KI+RT
Sbjct: 748 KVSSTHAPLKFSELPLGTSNKQTMRNSEPSQWVGEKVVSNFFQKTALCMWEDIQDKIMRT 807

Query: 303 SFEHVGDLEQETLKIFGAMVEASTNNLAPLQEFVGGYFQKLREYLGMQSSLSAYLTPQIK 317
            FE++  L  E   +   + +   + L  L+E++  Y +++  +  +QSS SA L    K
Sbjct: 808 PFEYIPRLRPEIATVLSGIEKIHADGLTSLEEYLNSYLKRVDNFNDVQSSYSAQLLSTDK 867

BLAST of Spg027945 vs. NCBI nr
Match: XP_031739998.1 (uncharacterized protein LOC116403342 [Cucumis sativus] >XP_031745415.1 uncharacterized protein LOC105434487 [Cucumis sativus])

HSP 1 Score: 145.2 bits (365), Expect = 9.6e-31
Identity = 127/462 (27.49%), Postives = 173/462 (37.45%), Query Frame = 0

Query: 3   IEAYSPCRFSRQFGFHQNVPNDLHNDPPPVSLENVFHSWRICTATLTLLKVYLPARLPDP 62
           IE YSPCRFSRQFGF+Q+VP DL  + P  +  NV + W IC    TL +VYLP   P+P
Sbjct: 75  IEPYSPCRFSRQFGFYQDVPYDLGEEIPEANFFNVRYCWMICIRENTLSQVYLPVSAPNP 134

Query: 63  RDQTTRSYDKWWSQKHGRYLEEGIQLLVNSFTIPSTKPKPHKDLD-----------TKQA 122
               T  Y  WW  KHG YL+EG+Q L++  T P  K K  K ++           + + 
Sbjct: 135 DTHVTSHYKVWWLAKHGDYLQEGVQHLIDRPTPPHIKSKTTKKIEHNFGSGNQKICSDET 194

Query: 123 GKRAIEASTRPTYNLRDE-----------------------------------EESHSSN 182
            +R +E     T  L D                                    E+S SSN
Sbjct: 195 DERLVEKIEGGTKRLVDNLSLSTRFKHLIKGGIDNVGKDNRLSIATKHPSKRIEDSQSSN 254

Query: 183 DDRHWKRPK--------------------------------------------------- 242
           DDRHWKRPK                                                   
Sbjct: 255 DDRHWKRPKKPNKQSIDDEESPIRSSLGDHDLHIEDTLESMPNLEDCNIVLPNLEDCNIV 314

Query: 243 ------------------------------------------------------------ 294
                                                                       
Sbjct: 315 LSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAIT 374

BLAST of Spg027945 vs. ExPASy TrEMBL
Match: A0A5A7U4C3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold726G00240 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 3.4e-34
Identity = 124/396 (31.31%), Postives = 161/396 (40.66%), Query Frame = 0

Query: 1   MTIEAYSPCRFSRQFGFHQNVPNDLHNDPPPVSLENVFHSWRICTATLTLLKVYLPARLP 60
           M I   +PCRF RQFGF+Q+VP DL    P  +L NV + W IC    TL +VYLPA   
Sbjct: 321 MHIHKGNPCRFGRQFGFYQDVPYDLSEKIPKANLANVRYHWMICVRESTLSQVYLPAPTL 380

Query: 61  DPRDQTTRSYDKWWSQKHGRYLEEGIQLLVNSFTIPSTKPKPHKDLDTKQAGKRAIEAST 120
            P +  T  Y  WW  KHG YL+EG+Q L++  T    K K  K ++     K     + 
Sbjct: 381 HPCNHITSHYKAWWLAKHGDYLQEGLQNLIDRPTPSLIKSKTTKKIEHNPDKKICFSKTK 440

Query: 121 RP-----------------------TYNLRDE---EESHSSNDDRHWKRPK--------- 180
            P                       T + R     E+SHSSNDDRHWKRPK         
Sbjct: 441 EPVDAQFKFAARSGADNMHKDLLKLTTDKRPSTHTEDSHSSNDDRHWKRPKRPDKQSIDD 500

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 501 EKPPIEVPDVPMASPEDLSASENSKTPIGATIMSTCPLVTKASPQRVGGTEPITTSEISH 560

Query: 241 --------------------SIHGKIVRTSFEHVGDLEQETLKIFGAMVEASTNNLAPLQ 271
                               S+  KI+RT FE V  LE E  KIF A+  + +NNL  L+
Sbjct: 561 FCADNLISDLRQKTAITLWESLRQKIIRTPFERVSSLEPEMRKIFAAIATSGSNNLTFLK 620

BLAST of Spg027945 vs. ExPASy TrEMBL
Match: A0A5A7UGW6 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold190G00140 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.2e-31
Identity = 115/452 (25.44%), Postives = 192/452 (42.48%), Query Frame = 0

Query: 3   IEAYSPCRFSRQFGFHQNVPNDLHNDPPPVSLENVFHSWRICTATLTLLKVYLPARLPDP 62
           I +YSP RF RQFGF+Q++PND+   PP ++L+N+ + WRIC    TL ++YLP R  +P
Sbjct: 493 ITSYSPYRFGRQFGFYQDLPNDIGGMPPAITLDNILYHWRICMRRNTLSELYLPVRSLEP 552

Query: 63  RDQTTRSYDKWWSQKHGRYLEEGIQLLVNSFTIPSTKPKPHKDLDTKQAGK--RAIEAST 122
               T+ +  WW+ KH  Y E+    LV+S   P ++P+  K+  +   GK  R +EA  
Sbjct: 553 CKHVTQRFTDWWTTKHMNYFEDNRHHLVSSAIPPPSQPRLPKNRGSNLGGKEIRLVEAMA 612

Query: 123 RPTYNLRDEEESHSSNDDRHWKRP------------------------------------ 182
               +  +E ES S+  DRHWKRP                                    
Sbjct: 613 PNLEDEVNEHESDSNKSDRHWKRPLKKAKVSGDHPDGRGLSALEVPDVPPLSPLNDHLEG 672

Query: 183 -------KSIHG-KIVRTSFEHVG---------------------------------DLE 242
                  +S+ G   V ++FE VG                                 DLE
Sbjct: 673 LIEPDSDESLTGPHAVDSAFEEVGTSRTPVNKPAEQSLRPSTLLEEIRRGKMTVGGKDLE 732

Query: 243 QETLK------------------------------------------------IFGAMVE 302
             + K                                                +   + +
Sbjct: 733 SPSSKEGACPKASLQKVSSAHAPLKFSELPLGVSNKQTMRNPEPSQLRPEIATVLSGIEK 792

Query: 303 ASTNNLAPLQEFVGGYFQKLREYLGMQSSLSAYLTPQIKDSQLEEKKLHLEKALS----- 317
              + LA L+E++  Y +++  +  +QSS SA L+   K  QL EK   +++AL+     
Sbjct: 793 IHADGLASLEEYLNSYLKRVENFNDVQSSYSAQLSSTDKACQLNEKTSAIKEALTLVKQL 852

BLAST of Spg027945 vs. ExPASy TrEMBL
Match: A0A5D3C3D7 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G001360 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 4.7e-31
Identity = 116/473 (24.52%), Postives = 189/473 (39.96%), Query Frame = 0

Query: 3   IEAYSPCRFSRQFGFHQNVPNDLHNDPPPVSLENVFHSWRICTATLTLLKVYLPARLPDP 62
           I +YSP RF RQFGF+Q++PND+   PP ++L+N+ + WRICT   TL ++YL  R  +P
Sbjct: 508 ITSYSPYRFGRQFGFYQDLPNDIGGMPPAITLDNILYHWRICTRRNTLFELYLSVRSLEP 567

Query: 63  RDQTTRSYDKWWSQKHGRYLEEGIQLLVNSFTIPSTKPKPHKDLDTKQAGKR--AIEAST 122
               T+ +  WW+ KH  Y E+    LV+S   P ++P+  K+  +   GK+   +EA  
Sbjct: 568 CKHVTQRFTDWWTTKHMTYFEDNRHHLVSSAISPPSQPRLPKNRGSNLGGKKIGLVEAMA 627

Query: 123 RPTYNLRDE-----EESHSSNDDRHWKRP------------------------------- 182
               NL +E     +ES SS  DRHWKRP                               
Sbjct: 628 P---NLEEEVKEHKDESDSSKSDRHWKRPLKKAKVSGDHPDWFARLIEPDSDESLTGPHV 687

Query: 183 ------------------------------------------------------------ 242
                                                                       
Sbjct: 688 VDSAFEEVGTSKTPVNKPAEQSLRPSALFEEIRRGKMTVGGKDLESHSSKEGVCPKASLP 747

Query: 243 --------------------------------------------------KSIHGKIVRT 302
                                                             + I  KI+RT
Sbjct: 748 KVSSTHAPLKFSELPLGTSNKQTMRNSEPSQWVGEKVVSNFFQKTALCMWEDIQDKIMRT 807

Query: 303 SFEHVGDLEQETLKIFGAMVEASTNNLAPLQEFVGGYFQKLREYLGMQSSLSAYLTPQIK 317
            FE++  L  E   +   + +   + L  L+E++  Y +++  +  +QSS SA L    K
Sbjct: 808 PFEYIPRLRPEIATVLSGIEKIHADGLTSLEEYLNSYLKRVDNFNDVQSSYSAQLLSTDK 867

BLAST of Spg027945 vs. ExPASy TrEMBL
Match: A0A5A7SHN8 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1204G00400 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 5.7e-29
Identity = 123/452 (27.21%), Postives = 191/452 (42.26%), Query Frame = 0

Query: 3   IEAYSPCRFSRQFGFHQNVPNDLHNDPPPVSLENVFHSWRICTATLTLLKVYLPARLPDP 62
           I +YSP +F RQFGF+Q++PND+   PP ++L+N+ + WRICT   TL ++YLPAR  +P
Sbjct: 459 ITSYSPYKFERQFGFYQDLPNDIGGMPPAITLDNILYHWRICTRRNTLSELYLPARSLEP 518

Query: 63  RDQTTRSYDKWWSQKHGRYLEEGIQLLVNSFTIPSTKPKPHKDLDTKQAGK--RAIEAST 122
               T+ +  WW+ KHG Y E+    LV+S   P ++ +  K+      GK  R +EA  
Sbjct: 519 CKHVTQRFTDWWTTKHGTYFEDNRHHLVSSAIPPPSQSRLPKNRGRNLGGKEIRLVEAMA 578

Query: 123 RPTYNLRDE-----EESHSSNDDRHWKRP------------------------------- 182
               NL +E     +ES SS  DRHWKRP                               
Sbjct: 579 P---NLEEEVKEHKDESDSSKSDRHWKRPLKKAEVSGDHPNERGLSALEVPDVPLVSPLN 638

Query: 183 ------------KSIHG-KIVRTSFEHVG------------------------------- 242
                       +S+ G   V  +FE VG                               
Sbjct: 639 DHLEGLIEPDSDESLTGPHAVDLAFEEVGTSKTPVNKPAEQSLRPSALLEEIRRGKMTVG 698

Query: 243 --DLEQETLKIFGAMVEASTNNL----APLQEF-----------------------VGGY 302
             DLE  + K  G  ++AS   +    APL E                        V  +
Sbjct: 699 GKDLESPSSK-EGVCLKASLQKVSSARAPLSELPLGAFNKQTARNPEPSQWVGEKVVSNF 758

Query: 303 FQKLR----------------EYLGMQSSLSAYLTPQIKDSQLEEKKLHLEKALS----- 317
           FQK                  EY+       A L    K  QL EK   +++AL+     
Sbjct: 759 FQKTALCMWEDIQDKIMQTPFEYIPRLRPEIAMLLSTDKTRQLNEKTSAIKEALTLVKQL 818

BLAST of Spg027945 vs. ExPASy TrEMBL
Match: A0A5A7U8L3 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G001600 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 7.7e-26
Identity = 105/451 (23.28%), Postives = 174/451 (38.58%), Query Frame = 0

Query: 3   IEAYSPCRFSRQFGFHQNVPNDLHNDPPPVSLENVFHSWRICTATLTLLKVYLPARLPDP 62
           I +YS  RF RQFGF+Q++PND+   PP ++L+N+ +  RICT   TL ++YLPAR  +P
Sbjct: 487 ITSYSSYRFGRQFGFYQDLPNDIGGMPPAITLDNILYHLRICTRCNTLSELYLPARSLEP 546

Query: 63  RDQTTRSYDKWWSQKHGRYLEEGIQLLVNSFTIPSTKPKPHKDLDTKQAGK--RAIEAST 122
               T+ +  WW+ KHG Y E+    LV S     ++P+  K+  +   GK  R +EA  
Sbjct: 547 CKHVTQQFTDWWTTKHGTYFEDNRHHLVTSVIPSPSQPRLPKNRGSNLGGKEIRLVEAMA 606

Query: 123 RPTYNLRDE-----EESHSSNDDRHWKRP------------------------------- 182
               NL +E     +ES++S  DRHWKRP                               
Sbjct: 607 P---NLEEEVKEHKDESNNSKSDRHWKRPLKKAKVSGDHPNGRGLSALEVPDVPPLSPLN 666

Query: 183 ------------------------------------------------------------ 242
                                                                       
Sbjct: 667 DHLEGLIEPDSDKSLTGPHAVDSAFEEVGTSKTLVNKPAEQSLHPSALLEEIRRGKMTVG 726

Query: 243 ---------------------------------------KSIHGKIVRTSFEHVGDLEQE 302
                                                  + I  KI+RT FE++  L  E
Sbjct: 727 EKTLRALHPKKTARSPEPSQWVGEKVVSNFFQKTALCMWEDIQDKIMRTPFEYIPRLRPE 786

Query: 303 TLKIFGAMVEASTNNLAPLQEFVGGYFQKLREYLGMQSSLSAYLTPQIKDSQLEEKKLHL 317
              +F  + +   + L  L+E++  Y +++  +  +QSS SA L    K  QL EK   +
Sbjct: 787 IATVFSGIEKIHADGLTSLEEYLNSYLKRVDNFNDVQSSYSAQLLSTDKAHQLNEKTSAI 846

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_031745312.12.4e-3427.17uncharacterized protein LOC116405439 [Cucumis sativus][more]
KAA0050733.17.1e-3431.31uncharacterized protein E6C27_scaffold560G00370 [Cucumis melo var. makuwa] >TYJ9... [more]
KAA0053466.12.5e-3125.44hypothetical protein E6C27_scaffold190G00140 [Cucumis melo var. makuwa][more]
TYK06433.19.6e-3124.52hypothetical protein E5676_scaffold163G001360 [Cucumis melo var. makuwa][more]
XP_031739998.19.6e-3127.49uncharacterized protein LOC116403342 [Cucumis sativus] >XP_031745415.1 uncharact... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7U4C33.4e-3431.31Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7UGW61.2e-3125.44PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... [more]
A0A5D3C3D74.7e-3124.52PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... [more]
A0A5A7SHN85.7e-2927.21PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... [more]
A0A5A7U8L37.7e-2623.28PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 228..283
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 100..114
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 123..143
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 99..143
NoneNo IPR availablePANTHERPTHR366071,2-DIHYDROXY-3-KETO-5-METHYLTHIOPENTENE DIOXYGENASE 4coord: 2..291
NoneNo IPR availablePANTHERPTHR36607:SF201,2-DIHYDROXY-3-KETO-5-METHYLTHIOPENTENE DIOXYGENASE 4coord: 2..291

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg027945.1Spg027945.1mRNA