Spg027633 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAGCGAAAAAGTTTGGAGTTACTGAGTTTGTTCATTCTGGAAGTCTTGGGGGATAAATCTGTGAGTCAGGAATGTAGGTTTTCAACGACACATCAAACGTGCGACCTTTGCAACAAATAATTTCTTACAATTCACTATTGTTTAAGCAAATTTACTTGAAGAGTTTTGCTGGATATTATGCAGTCATACCATTGGATTCTAAACATTATTTAGAAATTAAGTTAAGAAGGAGAATAGATATACATTGTTGCTAACTTATTGAAGTGTATGTGAATTGAGATGCTACTTCATGAATGGTTAAGGGGTTTTGTAACCCTTTGGCTTATTAGTGTCCAATAAAGGCTCTAAAACTAGAGCAAATACGTATGATATATCCCATATATTTTTTTAAGGCTTTTGCATTGCAAGTGCTACCATTATAGCCAATAAGAGCATAACTCAACTAGCATAAAGTTGTACTGATGATCAGAAGTCTGGGGTTTGAATCCCCTGCCATCCCTCATATTGTCAAGTGCTATCATTATATATACTTTGTGAATTTGTACATGGTAAGATTGATTCTAACTAAATAACCTTTTTTCTTAACCCCTTTCAATCTCAATGCTGATCAGGTAATTATTGAAATGACTAGTGGTGGTGCAGACTATTGCTTTGAATGTGTGGGAATGGCTTCCTTAGTTCACGAAGCATTTAATTTGCATGCTGCAGACAGGTCCTCCAACCCTTCTTTGTTGACATTTTCTTTGATCATCTTGATTATACCTTTTGTTTGACATCAATTGGATTGAATGTGATAGATATGCTTGGCATTGGTGATACTTATATAACTTTTTCCAATATTCTTTAATAAACTAAAAAAAATTAGCAAAAATTGCAAAAACTGTTAGGATTGTTGTAAATTTAAGTAACCTCTCCCTCAAACTTACGAAATTGTCTTGAAACTGCAACAATTAATTTCAAGCATCCTTATAAGAACTCTTATGGTACAAAACATTATATCTCATGCCCGATGATATAATGCAATTTTGTAGTATGGTCGACGTATCAAATACTTGTGTATTGGTCTATATTGCGTAAGTATACTATTTTAATAATATTATAACTTTATTCATAGTTATTTAATAGTATATAGTCTTATATATTTATGAAAAATTGTGTGTGCTATAGGTTCCTTTGGAAGCATTTTGAGGAGACTGGTAGACTAGACAATTTTAAGGTCGTGGACTCAAACGACATTGCACCGATGTTTGGGACGCTAGAAAAACGTGCAAGAAGTTTAACTACCGTCTTTTCTTTACTACAACCAGGGCAAATGATATTCATTCCATATAATCCTGGGTAAGAGTAAATATATATACGAATTTTTGTTAGATTTATACAAGTTTTGATAGTTGGTAATTAATTGATTGTATTTCTTTGGTCTTGATAGGAATCACTGGATATTGTGTGTTGTAAATGTAAGAGACAACACCGTTTATCTATTGGACTCCTTACATCCTAATCTCTTGGATGACCTCAAACATGTTGTAAACACGTAAGTTTATTAGTTAAGCTAGTATGTGCTTTTGTATGTTTGTTCATTACTTATGTATTTCTTTTGTATGTTTAATTTCTTTTTAACTTCATATATAGAGCATTGAGGGTTTGTATGGCACAAAGTACATCGAATAAGCAACAACAAAAGACTTCTTGAATACCTGTAAAGGTAAGTAGTAAATTTTAATTACTGTGTATGGGGTTTAAATATATTTTAAATATTGTTATGGGTTTTTTTTTTAAGTGTCCTCGCCAACAAGGTTGTGTTGAATGTGGGTACTACGTGATGAAGTTTATGAGAGAAATTCTACATAATCCAGAGACCCCCATCACTGCTCTCGTAAGTTTGATATTTCTAAACTTAGAATTGTGTGTATATATACGGTACTTTTTCTTAAATATAATTGTAATATCTATTTTTTGTTTTTTTTGTAGTTTAATACTAAGAATTCGTTCACACAAGAAAAGCTGGACGAGGTACGAGTTGAATGGGTGGGACATGTGTCAAACTTCACGTGAAGTATCCATCCTTGTGGTAGCTAGTTAGCTAGCTCATACGGAATAAACCTTAGAACAGTGTGATGAAAGAGTTTGAATCGTTCGAACTCGAATTAGGAAGTAAACATTAAATGATATTCGATATATTTAATATTATAGTTTAAATTACGAATTAAAACTACATCGAGAGAGTTGGAAATATTTAAATATGATTTAAATATTATACACGTGGATAGGGATTCACGTTCGAGAAACCGGGATTGAAAGAAATCGGAATTGGTGCTAGATATATTTAATATTGGATATTAAATTAAATAATAATTAAAATGTTTATTTATTTATTTAGTTAAAATTAATTGTATTTTTAGTGGATGGATTTGAGAAATTCATTTAACTTATAAAATTAGTTTTTTAATTTTAATTTGATTAAAATTAATTAGGAGGCAAAATACATCTTATATTTGCCACCAAACTTATATTCTTATCTTCACCGTAAGACACCTCTCAATACACTTCATCAAAAGACAATGAGTTATCTTGGTTTTAAGAGTGTAATTTGCATGTGATTCTTCTTTATAAGAAGAAGAAAAACGTGGAGTTGAGGGATGATGAAGCTGTTAATTCTCTCTCAAAAATTACAAGCTCAAACCCTCAAGATACAATCTTCTCTCTCCCTAATTTCATCATAAACAGCTCCCACAAGCTCGTTCTAAGGCTAGAGAATAGCGGGGAAGATCAAGGTGGTTGTCTCGAGCCCGTTCGTGAGAAGAAAACAACAAAGGAGTTGCTTGATTCAGCCATAAAAGGTTGGTTTATCGAAACTCTGTTTTCGGTTTAG ATGCAGCGAAAAAGTTTGGAGTTACTGAGTTTGTTCATTCTGGAAGTCTTGGGGGATAAATCTGTAATTATTGAAATGACTAGTGGTGGTGCAGACTATTGCTTTGAATGTGTGGGAATGGCTTCCTTAGTTCACGAAGCATTTAATTTGCATGCTGCAGACAGTATGGTCGACGTATCAAATACTTGTGTATTGGTCTATATTGCGTTCCTTTGGAAGCATTTTGAGGAGACTGGTAGACTAGACAATTTTAAGGTCGTGGACTCAAACGACATTGCACCGATGTTTGGGACGCTAGAAAAACGTGCAAGAAGTTTAACTACCGTCTTTTCTTTACTACAACCAGGGCAAATGATATTCATTCCATATAATCCTGGGAATCACTGGATATTGTGTGTTGTAAATGTAAGAGACAACACCGTTTATCTATTGGACTCCTTACATCCTAATCTCTTGGATGACCTCAAACATGTTGTAAACACCTCCCACAAGCTCGTTCTAAGGCTAGAGAATAGCGGGGAAGATCAAGGTGGTTGTCTCGAGCCCGTTCGTGAGAAGAAAACAACAAAGGAGTTGCTTGATTCAGCCATAAAAGGTTGGTTTATCGAAACTCTGTTTTCGGTTTAG ATGCAGCGAAAAAGTTTGGAGTTACTGAGTTTGTTCATTCTGGAAGTCTTGGGGGATAAATCTGTAATTATTGAAATGACTAGTGGTGGTGCAGACTATTGCTTTGAATGTGTGGGAATGGCTTCCTTAGTTCACGAAGCATTTAATTTGCATGCTGCAGACAGTATGGTCGACGTATCAAATACTTGTGTATTGGTCTATATTGCGTTCCTTTGGAAGCATTTTGAGGAGACTGGTAGACTAGACAATTTTAAGGTCGTGGACTCAAACGACATTGCACCGATGTTTGGGACGCTAGAAAAACGTGCAAGAAGTTTAACTACCGTCTTTTCTTTACTACAACCAGGGCAAATGATATTCATTCCATATAATCCTGGGAATCACTGGATATTGTGTGTTGTAAATGTAAGAGACAACACCGTTTATCTATTGGACTCCTTACATCCTAATCTCTTGGATGACCTCAAACATGTTGTAAACACCTCCCACAAGCTCGTTCTAAGGCTAGAGAATAGCGGGGAAGATCAAGGTGGTTGTCTCGAGCCCGTTCGTGAGAAGAAAACAACAAAGGAGTTGCTTGATTCAGCCATAAAAGGTTGGTTTATCGAAACTCTGTTTTCGGTTTAG MQRKSLELLSLFILEVLGDKSVIIEMTSGGADYCFECVGMASLVHEAFNLHAADSMVDVSNTCVLVYIAFLWKHFEETGRLDNFKVVDSNDIAPMFGTLEKRARSLTTVFSLLQPGQMIFIPYNPGNHWILCVVNVRDNTVYLLDSLHPNLLDDLKHVVNTSHKLVLRLENSGEDQGGCLEPVREKKTTKELLDSAIKGWFIETLFSV Homology
BLAST of Spg027633 vs. NCBI nr
Match: XP_022136080.1 (uncharacterized protein LOC111007859 isoform X4 [Momordica charantia]) HSP 1 Score: 92.0 bits (227), Expect = 6.3e-15 Identity = 41/111 (36.94%), Postives = 68/111 (61.26%), Query Frame = 0
BLAST of Spg027633 vs. NCBI nr
Match: XP_022136076.1 (uncharacterized protein LOC111007859 isoform X1 [Momordica charantia]) HSP 1 Score: 92.0 bits (227), Expect = 6.3e-15 Identity = 41/111 (36.94%), Postives = 68/111 (61.26%), Query Frame = 0
BLAST of Spg027633 vs. NCBI nr
Match: XP_022136077.1 (uncharacterized protein LOC111007859 isoform X2 [Momordica charantia]) HSP 1 Score: 92.0 bits (227), Expect = 6.3e-15 Identity = 41/111 (36.94%), Postives = 68/111 (61.26%), Query Frame = 0
BLAST of Spg027633 vs. NCBI nr
Match: XP_038895930.1 (uncharacterized protein LOC120084092 isoform X2 [Benincasa hispida]) HSP 1 Score: 84.0 bits (206), Expect = 1.7e-12 Identity = 38/109 (34.86%), Postives = 65/109 (59.63%), Query Frame = 0
BLAST of Spg027633 vs. NCBI nr
Match: TYK03389.1 (uncharacterized protein E5676_scaffold84663G00280 [Cucumis melo var. makuwa]) HSP 1 Score: 83.2 bits (204), Expect = 2.9e-12 Identity = 43/131 (32.82%), Postives = 69/131 (52.67%), Query Frame = 0
BLAST of Spg027633 vs. ExPASy Swiss-Prot
Match: Q9FH04 (Alcohol dehydrogenase-like 7 OS=Arabidopsis thaliana OX=3702 GN=At5g42250 PE=2 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 1.8e-04 Identity = 21/27 (77.78%), Postives = 23/27 (85.19%), Query Frame = 0
BLAST of Spg027633 vs. ExPASy TrEMBL
Match: A0A6J1C2V2 (uncharacterized protein LOC111007859 isoform X4 OS=Momordica charantia OX=3673 GN=LOC111007859 PE=3 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 3.1e-15 Identity = 41/111 (36.94%), Postives = 68/111 (61.26%), Query Frame = 0
BLAST of Spg027633 vs. ExPASy TrEMBL
Match: A0A6J1C2H7 (uncharacterized protein LOC111007859 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007859 PE=3 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 3.1e-15 Identity = 41/111 (36.94%), Postives = 68/111 (61.26%), Query Frame = 0
BLAST of Spg027633 vs. ExPASy TrEMBL
Match: A0A6J1C4J7 (uncharacterized protein LOC111007859 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007859 PE=3 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 3.1e-15 Identity = 41/111 (36.94%), Postives = 68/111 (61.26%), Query Frame = 0
BLAST of Spg027633 vs. ExPASy TrEMBL
Match: A0A5D3BZ91 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84663G00280 PE=3 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 1.4e-12 Identity = 43/131 (32.82%), Postives = 69/131 (52.67%), Query Frame = 0
BLAST of Spg027633 vs. ExPASy TrEMBL
Match: A0A5A7U441 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold673G001120 PE=3 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 2.4e-12 Identity = 39/109 (35.78%), Postives = 62/109 (56.88%), Query Frame = 0
BLAST of Spg027633 vs. TAIR 10
Match: AT5G42250.1 (Zinc-binding alcohol dehydrogenase family protein ) HSP 1 Score: 47.8 bits (112), Expect = 1.3e-05 Identity = 21/27 (77.78%), Postives = 23/27 (85.19%), Query Frame = 0
BLAST of Spg027633 vs. TAIR 10
Match: AT1G22430.1 (GroES-like zinc-binding dehydrogenase family protein ) HSP 1 Score: 45.1 bits (105), Expect = 8.2e-05 Identity = 20/27 (74.07%), Postives = 23/27 (85.19%), Query Frame = 0
BLAST of Spg027633 vs. TAIR 10
Match: AT1G22430.2 (GroES-like zinc-binding dehydrogenase family protein ) HSP 1 Score: 45.1 bits (105), Expect = 8.2e-05 Identity = 20/27 (74.07%), Postives = 23/27 (85.19%), Query Frame = 0
BLAST of Spg027633 vs. TAIR 10
Match: AT1G22440.1 (Zinc-binding alcohol dehydrogenase family protein ) HSP 1 Score: 42.4 bits (98), Expect = 5.3e-04 Identity = 19/27 (70.37%), Postives = 22/27 (81.48%), Query Frame = 0
BLAST of Spg027633 vs. TAIR 10
Match: AT4G22110.1 (GroES-like zinc-binding dehydrogenase family protein ) HSP 1 Score: 42.4 bits (98), Expect = 5.3e-04 Identity = 19/28 (67.86%), Postives = 22/28 (78.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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