Spg027536 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg027536
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold11: 4582422 .. 4583364 (+)
RNA-Seq Expression	Spg027536
Synteny	Spg027536

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAAAAGCAAGGAAAGAAAGAGAGACGAAAGAAGAGGTGCCAGTAGATGAGGATACAATGGAAGAGAAGGTTGAAGAGGCTTCGTAGAGACCAAAGAAAAAGAAGAATAGGTCTGAGAGAAAAAAAAAGTAAGAACCCCTGCCCCAACCCCTTTTCCTGACCATCTGTTTTTGAAAAAAAAAGAGCCAGAAAAGGAAAAAAAAGGAACTGAGTGAAGAAGTTGAGCTTGATGAAGGATTTCGATACGGGAGGTTCATTAATGAAGAGGCAAGACAAAAATATCAAGAAGTCCTGAAGCGAGATTTCCTAATGGAGCGCGGCTTCGATGGTGGCGAAGAGCTCCCACATTTTCTTTAAGTGGACATCACTAATCACAGTTGGAAACGGTTGTGCGCAAAGACGGAGCCCACTGTTGATCAACTAGAACGAGAGTTTTACGCCAACATCGATGAAAATGAAGGATTCTTGGTTATTGTTCGTAGAGTTGTTGTCGAATGGAGCCCTGGAGTGATTAATTCTCTATTAAATTTGAAAGACTTCTCCCACGCTGTTTTCAATGAAATATTAGTTGCTTCCTCAAACGAGCAACTGAATGCCCAGTGGAGGTTGTCTAGGATGAGGGCAAAAAAATTCCAGACAGCATACCTGAAGTGTGAGGCTAACACTTGGCTAAGCTTTGTCAAGCAGAAATTATTGACTACAACGTACGCCTCCACTATCCCCCGTGATCGAGTGCACTTGAAGGTTCAGAGTCCCAAAGAGTTCCAATGATATAAACTTGTTTGATAAGGGGATTATTGACACTACCAATCTGGCTAGGCTTCAAAAAGTTGAGGCGTGCGAAGGTGGTTTGTTGTGCGGTGTCCACAGAGCGCTGGAGCAGCTTGAGATGGTTCTCAGTAGGCTAGAATTCACTGAGAGACAACTTCAAACCTACTAG

mRNA sequence

ATGACAAAAGCAAGGAAAGAAAGAGAGACGAAAGAAGAGGTGCCAGTAGATGAGGATACAATGGAAGAGAAGAGCCAGAAAAGGAAAAAAAAGGAACTGAGTGAAGAAGTTGAGCTTGATGAAGGATTTCGATACGGGAGTTGGAAACGGTTGTGCGCAAAGACGGAGCCCACTGTTGATCAACTAGAACGAGAGTTTTACGCCAACATCGATGAAAATGAAGGATTCTTGGTTATTGTTCGTAGAGTTGTTGTCGAATGGAGCCCTGGAGTGATTAATTCTCTATTAAATTTGAAAGACTTCTCCCACGCTGTTTTCAATGAAATATTAGTTGCTTCCTCAAACGAGCAACTGAATGCCCAGTGGAGAGTCCCAAAGAGTTCCAATGATATAAACTTGTTTGATAAGGGGATTATTGACACTACCAATCTGGCTAGGCTTCAAAAAGTTGAGGCGTGCGAAGGTGGTTTGTTGTGCGGTGTCCACAGAGCGCTGGAGCAGCTTGAGATGGTTCTCAGTAGGCTAGAATTCACTGAGAGACAACTTCAAACCTACTAG

Coding sequence (CDS)

ATGACAAAAGCAAGGAAAGAAAGAGAGACGAAAGAAGAGGTGCCAGTAGATGAGGATACAATGGAAGAGAAGAGCCAGAAAAGGAAAAAAAAGGAACTGAGTGAAGAAGTTGAGCTTGATGAAGGATTTCGATACGGGAGTTGGAAACGGTTGTGCGCAAAGACGGAGCCCACTGTTGATCAACTAGAACGAGAGTTTTACGCCAACATCGATGAAAATGAAGGATTCTTGGTTATTGTTCGTAGAGTTGTTGTCGAATGGAGCCCTGGAGTGATTAATTCTCTATTAAATTTGAAAGACTTCTCCCACGCTGTTTTCAATGAAATATTAGTTGCTTCCTCAAACGAGCAACTGAATGCCCAGTGGAGAGTCCCAAAGAGTTCCAATGATATAAACTTGTTTGATAAGGGGATTATTGACACTACCAATCTGGCTAGGCTTCAAAAAGTTGAGGCGTGCGAAGGTGGTTTGTTGTGCGGTGTCCACAGAGCGCTGGAGCAGCTTGAGATGGTTCTCAGTAGGCTAGAATTCACTGAGAGACAACTTCAAACCTACTAG

Protein sequence

MTKARKERETKEEVPVDEDTMEEKSQKRKKKELSEEVELDEGFRYGSWKRLCAKTEPTVDQLEREFYANIDENEGFLVIVRRVVVEWSPGVINSLLNLKDFSHAVFNEILVASSNEQLNAQWRVPKSSNDINLFDKGIIDTTNLARLQKVEACEGGLLCGVHRALEQLEMVLSRLEFTERQLQTY

Homology

The following BLAST results are available for this feature:

BLAST of Spg027536 vs.


Match Name	E-value	Identity	Description

BLAST of Spg027536 vs.


Match Name	E-value	Identity	Description

BLAST of Spg027536 vs.


Match Name	E-value	Identity	Description

BLAST of Spg027536 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 161..181
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg027536.1	Spg027536.1	mRNA