Spg027452 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg027452
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold7: 41818645 .. 41824961 (-)
RNA-Seq ExpressionSpg027452
SyntenySpg027452
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTCCCCGAGCACAAGGACGTGGAAGAGGTCGAGGAAGAGGACGTGGCAGGGGTCGTACAGCCCCTGAGCAAGTCGTGCCACCAGTAGAGCAGGAAGGAAATCTACCAGAAAACCCACAAGTGGAACAGCCGGGGCCTGCGGTAGGACCTGTCCCGGTGGATATTCAGGCAATAGTTCAGACCGCAGTGCAGGCTGCAGTTGCAGGCGTGCTTGCAGGGCGACAGGCCCAAGCGCCTCAGAACAACGAAGCCGCCTTATCACGGGAGGCTAGGTGCTTAAGAGATTTCAGGAAGTGGGACCCATGTCCGTTCGATGGAGCTTCAAGGGACCCCACGGTAGCAGAGTTGTGGCTGTCCTCCATCGAGACTGTTTTTCGCCACATGAACTGCCCGGAGGACCAGAAAGTGTACTGCGCCGTGTTCTTGTTACGAGATAACGCCCTGATTTGGTGGCAATCGATTGAAAGGACCTTAGACGTCAGCAACGGACCTGTCACATGGACTCAGTTCAGGGGGGAGTTTTTCAGGAAGTATTACCCTGCCGCCTCCCGATTCAAGAAGCAATCAGAGTTCGTGGCTCTTACGCAGGGAAACCGAACGGTAGAGGAGTACGAGACTGAATTTGCCAGACTGTCACGGTTTGCCCCTGCCCTGGTAGCTGTAGAGGCTGATAAGGTGGAACGTTTCATCACAGGCTTAAGGGAAGAGATTCAGGGCAATGTGGCAGCCCATGAACCCCAAGACTATGCCACGGCAGTTAGGGTGGCACAGCTGGTTGATCGACGACCGTCAGCTGTCTCTTCAGAACATTCCTCAGGTCATAAGCGAAGGTACGATCAGATGAGCTCGAACACACAGAGGGGTCATCGTTACCCTAGACGAGGTCTGCCCCAGGACCGTCGACAGAGAGCACAGAATCAGCCAGGGCCTAATCAGGATAGGCCATTATGTCAGACCTGTAGGAAGTACCACTGGGGTCGTTGCTTGGCAGGGACCCGTGTTTGCTTCAAGTGTGGTCGGGAGGGGCATATTGCTCCGAATTGTAATCAGAAGAGAGCTAATTATGCCGACCAGCCGTCCAGTTCAAATCAGGCATCTGGGGCGAGACCAGCACAACATCAGGGCAAGATATTTGCCACCACCCGACAAGAGGCCGAGGACCTTAATGCAGTAGTGACAGGTACCATCCCTATCCTCGGCCACTATGCTTTTGTGTTGTTTGATTCGGGTTCTACGCATTCCTTTATTTCTGCATCATTTGTAAGTCAAGCCAACCTAGAACTAGAGCCGCTAGGCTATGTCTTGTCAGTCTCAACCCCTGCGGGGGTAACACTACTAGCTAGTGAAGCGGTGAAAGCCTGCCAAATGTTAGTGTCTGATCGATCGATGGATGTGACATTGATCGCCCTGGATATGAGTGATTTTGATGTTATTTTGGGAATGGAATGGTTGGCTTCTAATTATGCCAACATAGACTGTCATCGTAAGGAGGTGATCTTTAACCCTCCGTCAGAGGCAAGCTTCAAGTTTAAAGGATCGATGATCAAAGGTGCTCCTAAAGTGGTCTCTGCAATAAAGGCGAGAAAATTGATTAGCCAAGGAGCCTGGGGCTTATTGGCTAGCGTGGTTGACACAAGGAAAACCGAGGCATCAATGACCTCAATTCCGGTAGTAAGGGAGTTCACAGATGTGTTCCCTGAAGATCTGACAGGACTACCACCAGCACGAGAGGTTGACTTCTGCATTGAGCTTGAGCCAGGTACTAATCCAATTTCTAAAGCTCCATACAGGATGGCTCCAGCGGAATTGAAAGAGCTTAAGGTCCAGATTCAGGAGCTGTTGGACAAAGGTTATATACGCCCCAGCGTTTCGCCGTGGGGTGCTCCAGTTTTATTCGTGAAAAAGAAGGATGGGACAATGCGTTTGTGCATCGACTACCGGGAGCTGAACAAGGTAACAATAAAGAACAGATATCCTCTACCCAGGATTGAAGACCTTTTTGATCAGCTTCAAGGTGCAGCAGTATTCTCTAAAATAGATCTACGGTCAGGTTATCATCAGTTGAGGATTAGAGAGGACGATGTACCCAAGACAGCTTTCCGAACCAGGTATGGGCATTACGAATTCACCGTGATGTCCTTTGGGCTTACTAATGCTCCTGCAGTTTTCATGGACTTGATGAACAGGGTATTCAAGGAATTCTTGGATTCATTTGTGATTGTTTTTATCGACGACATTCTTATCTACTCCAAGACAGAAGAGGAACATGAGGATCATCTCAGGAGAGTTCTAATTACCTTAAGAACGAACAAGTTGTATGCCAAATTCTCTAAATGTGAGTTCTGGCTACAACGGGTTTCCTTCTTAGGGCACGTGGTTTCGAAGGAAGGTGTTACAGTAGATCCAGCCAAAATAGAGGCAGTGACCAATTGGTCTCGACCCACTTCAGTCAGCGAGATTCGGAGTTTCTTGGGGTTAGCAGGCTATTACCGTCGCTTCGTGCAAGGTTTTTCCAGTATAGCCGCACCTCTAACTCAGTTGACTCGAAAGGGTATTCCCTTCGCGTGGAATGAAGCTTGTGAGGCAAGCTTCCAAGAGCTTAAGCAGAGACTAGTGTCAGCACCAGTACTTACAGTACCTGATGGTTCAGGAGAATTTGTTATTTACAGTGATGCTTCAAAGAAGGGACTGGGTTGTGTGTTAATGCAGCATGGTAAGGTCATTGCTTATGCGTCTCGTCAGCTGAAAGATTATGAGAAGAACTACCCGACCCATGACTTGGAATTGGCAGCAGTGGTCTTTGCGTTGAAGATTTGGAGGCACTATTTATATGGAGAGAAAATCCAAATCTTCACGGACCACAAAAGTTTGAAATACCTCTTCACCCAGAAAGAGTTGAATATGAGACAGCGAAGATGGTTAGAGTTAGTAAAAGATTATGATTGTGACATCCAGTACCACCCGGGTAAGGCAAATGTGGTTGCAGATGCCCTCAGTAGGAAGACCGCTCATGCGTCTGCTTTGATTACTACTCAGGCTCATATATTGGATGACTTGGAACGTGCAGAGATTATGATTGCAGTGGGCGAAGTTACAGCACGCCTAGCTCAGTTGACAGTTAAGTCGAGCTTGAGACAGAGGATCATAGATGAACAACCAAGTGACCCTGACCTTGTTGTTAAACGCAGTCAAGTAGAGGCGGGACAGGGGAACGAGTTTTCCTTATCTTCAGACCTCGGCTTGTGTTACCAGGGTCGCTTATGCGTACCTGGGAATGCCGATCTCAAGCAGGAATTATTAGCAGAGGCACATAATTCACCTTTTTCAATCCATCCAGGAAGTACGAAGATGTACCATGATTTGAAACAGTATTACTGGTGGCAGGGCATGAAAAGAGAGATAGCGGATTTTGTCAGTAAATGCCTTGTTTGCCAACAGGTGAAAGCCCCGAGACAGAAACCAGCAGGCTTGTTGCAGCCGCTGAGTGTCCCAGAATGGAAGTGGGAGCATATATCTATGGACTTCATTACAGGATTGCCTAGAACGGCCAAGGGTTACACCGTGATTTGGGTCATTATCGACAGACTCACCAAGTCAGCGCATTTTCTCCCTGGAAAGCCTACTTACACTGTTGAAAAGTGGGCACAGTTATACATGACGGAGATAGTCAAGCTTCATGGGGTGCCGGTATCAATCGTGTCAGATAGAGACCCTCGGTTCACATCAAATTTCTGGGGGAGTTTGCAAAGAGCCTTAGGTACGCAGTTGCATTTCAGTACTGCTTTTCACCCTCAGACAGATGGTCAAACCGAACGATTGAACCAAACTCTAGAAGACATGTTGCGAGCATGTGTCTTGGATTTCTCAGGTAGTTGGGATGCACACCTGCACTTAATGGAATTTGCTTATAACAATAGTTATCAAGCAACCATCGGTATGTCACCGTTTGAGGCCCTTTATGGGAAGAGATGCAGGTCCCCTGTTTATTGGGATGAGGTCGGAGAACGTCAGTTGTTGGGACCTGAATTGATCCAAGCCTCCAGCGAGGCTATTCGCACAATCAGGTCGAGGATGTTAACAGCTCAAAGCCGACAGAAGAGCTATGCTGATACAAGGAGAAGAGATTTAGAGTTTGACGTGGGTGATCATGTTTTCTTGAAGGTAGCTCCGATGAAAGGAGTATTGAGGTTTGGAAGGAAGGGCAAGCTCAGCCCGCGTTTCATTGGTCCGTTTGAGATTTTAGAACGGATTGGTCCGGTAGCCTACCGTTTGGCCTTGCCGCCTTCTCTTTCGGCGGTACACAACGTTTTCCATGTCTCCATGCTGCGAAAGTATTTGACAAATCCAACCCACAGAGTGGACTTCGAACCTTTACATTTGAGCGAGAACTTGTCTTATGAGGAGGAACCTGTGCTAATCCTTGACAGAGAGGTGAAGGTCCTTCGCAATCGCGAGATAGCTCTCGTGAAGGTCCTTTGGCGAAACCATTTGTCTGAAGAGGCAACGTGGGAGAGAGAAGACGAGATGATGACCAAGTATCCAGAGTTGTTCCAGTACTAGCAACTTTCGAGGACGAAAGTTCTTTTAAGGTTAGTATGATGTAGCAACCGGCGTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAATGGAGAAAAAGGGGAGTGGGCAGCCGGTCAAGGGGGGAAAGGAAAAAAGGGGGGGGAAACTTTCCCCCCAATTTTCGGTCAAAGTGACCGTTTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAATCAGTTTTTCCCCTCTCTCCCCGACTCTCTTTCTCTCCCTCGAGTTCTCTCTCTCTCGTTCGGTCTCTCCCTCGCACGCCCTCAGTCCCACGCCGTCGTCTACCTCCGCCGCGCGCCTCGCCGCCGCCTCACGTCGCCGTCTTCAGCCGCACGCTCCGCCGCCGCCGGTAACGTTCTTCTTTTCTCTCTCTCTCTCTCCTTCGAGTTCTCTCTCTTTCTCCCTCGAATTCTCTCTCTCTAACTCGTCTCTCCCTCGCAGCCTCTCTCTCCGTCTGCACCGTCTCTCTCACCTCCGCGCCGCACGCCATTGTCTTCAGCCGTGAGCCGCCGCCGTTGTTCGCAGATCGCCGCCGCCGCTGCCGTCTTCATCTAGTGGGTAAGGAGTTTATAAGTGTGGGTTATTGGTCGATTTAATGTTAAATTAAGGATACCCACTGGTTTTAGTTTTCGATTTCAAGGTGCCCGTGGCGTTGGAGGCCGAGTTGTCGAATCGGAGCGAAACTTGGAAGTTGGACAGCAAGTAGTGTTACTGTTTTAGGTGAGTTTCCGACTTTGGGTAAGTGAACTAAGTTAAGTTTTGAATGATTTAATTATGTTAAAAGAGTACCCATTAATATTAGCTATTGATTTCTAGTTACCCACGACGTTTGAAGGCCGAATTGTTGAATTGGAGCGAAGTTGGAAATTGGACAGCAAGCAGTAGCTTCATTTGGGTGAGTTTTCGGCCCTCTCAAGTCTAGTGCTTTAGGAAATTTGTTAAGTTTGGTGTGCCAATGGTGTGTGAATATATATTTATGTATGTTTTATGTGTTAATAGACGAGTATTTCGCATCACGTGGTTGGTGTTGTATCGAGTCGTTGGAGGATTTTCGATCAAGCGTAGTATCTCAAGTAAGTAGCCGTTGGAATAGATTCTCTGCTTTAAACTCATTTAAATTGAGTATGGTTGCTATAGCGTGAGTTGAACTTAAACCTTAAGTTGTCCCTTGGAATGTAAGTAGCCATTTGGATTTAAGCTCTAAGTGTCGTCGTTGGGTTAAATCAAGCATGGTTGGTCCTTTATTTCTTGAAAGCATGGAACTAGTTAAGAATGTCTGAGTTAATGGTCGCATATTAACTTTTGTCGTTGTGTAAGTAGTTATTTGGGAATAAGGATTTTGATTATGTTATGTGGCGTGTTAGTGGATTGAGTGAGTAGCTTTTTGGGCATGAAGTTGTTGTTTTGGAATCATTGTATGCTTGTTTGAATATGGTTTAAGTGTCGTTTACTTGGACATGCATTAAGTGTTGCTATGCTTGTAGGACTAAGTAAGTATGTTTGGAATGTTTGATTTATGATTGTTCTGGATTGTGTTCATGTTATGGAGGATGGGTTAAATGTTCGATGGAGTTGTGATTGGAGCTGGATTGTGATTCTGACTTGATTGTGTTCATAGAAGTGTATATTCTTACTTCCAGGTGCAAGGGAAAATTTTGGGTTACCTCTGCGTACGTCGTTATGCTGCCGAATTTTCGGTAGCCTCATGACGACTTAG

mRNA sequence

ATGCCTCCCCGAGCACAAGGACGTGGAAGAGGTCGAGGAAGAGGACGTGGCAGGGGTCGTACAGCCCCTGAGCAAGTCGTGCCACCAGTAGAGCAGGAAGGAAATCTACCAGAAAACCCACAAGTGGAACAGCCGGGGCCTGCGGTAGGACCTGTCCCGGTGGATATTCAGGCAATACCTCTCTCTCCGTCTGCACCGTCTCTCTCACCTCCGCGCCGCACGCCATTGTCTTCAGCCGTGAGCCGCCGCCGTTGTTCGCAGATCGCCGCCGCCGCTGCCGTCTTCATCTATTTTCGATTTCAAGGTGCCCGTGGCGTTGGAGGCCGAGTTGTCGAATCGGAGCGAAACTTGGAAGTTGGACAGCAAGTAGTACGAGTATTTCGCATCACGTGGTTGGTGTTGTATCGAGTCGTTGGAGGATTTTCGATCAAGCGTAGTATCTCAAGTGCAAGGGAAAATTTTGGGTTACCTCTGCGTACGTCGTTATGCTGCCGAATTTTCGGTAGCCTCATGACGACTTAG

Coding sequence (CDS)

ATGCCTCCCCGAGCACAAGGACGTGGAAGAGGTCGAGGAAGAGGACGTGGCAGGGGTCGTACAGCCCCTGAGCAAGTCGTGCCACCAGTAGAGCAGGAAGGAAATCTACCAGAAAACCCACAAGTGGAACAGCCGGGGCCTGCGGTAGGACCTGTCCCGGTGGATATTCAGGCAATACCTCTCTCTCCGTCTGCACCGTCTCTCTCACCTCCGCGCCGCACGCCATTGTCTTCAGCCGTGAGCCGCCGCCGTTGTTCGCAGATCGCCGCCGCCGCTGCCGTCTTCATCTATTTTCGATTTCAAGGTGCCCGTGGCGTTGGAGGCCGAGTTGTCGAATCGGAGCGAAACTTGGAAGTTGGACAGCAAGTAGTACGAGTATTTCGCATCACGTGGTTGGTGTTGTATCGAGTCGTTGGAGGATTTTCGATCAAGCGTAGTATCTCAAGTGCAAGGGAAAATTTTGGGTTACCTCTGCGTACGTCGTTATGCTGCCGAATTTTCGGTAGCCTCATGACGACTTAG

Protein sequence

MPPRAQGRGRGRGRGRGRGRTAPEQVVPPVEQEGNLPENPQVEQPGPAVGPVPVDIQAIPLSPSAPSLSPPRRTPLSSAVSRRRCSQIAAAAAVFIYFRFQGARGVGGRVVESERNLEVGQQVVRVFRITWLVLYRVVGGFSIKRSISSARENFGLPLRTSLCCRIFGSLMTT
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..76

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg027452.1Spg027452.1mRNA