Spg027447 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg027447
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionProtein FAR1-RELATED SEQUENCE 2-like
Locationscaffold7: 42220065 .. 42228156 (-)
RNA-Seq ExpressionSpg027447
SyntenySpg027447
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAACTACACGAACGCGTTGGATCATTGCGTTTGTATCCAAATACAAAGCGGGTCGTATCCATAGTGTCACTAGGATAAGGTACCCAGCCTTATCCCTATACTACAGACCGTTTAGGCTAAAACTTGAACATCGATCTCTGTATGTCCCTACATACTAGTTCAAGCCTCATTCTATTAGCCTTGGATGTTTAGTTTATTGGATTAGGGTTAATAAGACAAGATATAATACAAACATAGATTAAATGAATAATTCATCAATTTTTTTAATGTTCGGTCAAAAGTACACTTACTATCTACGAGTTTTAGGGCATAAAACCCAACACAAGTATGTCATCAAAATATACGACAATAAATTTGTTTATAAATGGAAGTAATACCTGGTTCATTAGCCTCATGAAGGTGCTTAGAGCATTGGATAACCCAAATGGAATTACAAGCTATTCAAAGAGGCCTTCATTTGTTTTGAACGCAATTTTCCATTCATCACCCAGACGTATTCTTATTTGATGGTAGCCACTCTTCAAATCAACCTTTGAGAATATTGTTGCCCCTCCTAATTGGTCCAAAAGATCACTAATTCGTGGAATTGGGAATCGGTATTTGATAGTAATTTTGTTGATTGCCCGACTATCGACGCACATCTGCCAAGTGCCATCTTTTTTAGGAGTGAGGAGTGCTGGAACCGCACATGGGCTGAGACTAGGTTGAATATGGCCTTTGTTTAGCAACTCTTGTATTTGATCATGAAGGATTTGGTACTCGGTTGGGCTCATTTTATAGTGTGGAAGGTTGGGAAGTGTTGCTCCAGGAATTAGGTCAATAGAATGTTGAATGTCTCTTAATCAGGGAAGTTCTGTTGGGCTGTCCACGATGGCTTTGTGTTCTTGCAGCAAGTTTTGAACCTCATTCGGTATAAAGGTTTCAGAAACAGAATTATCAAAGTGTTTGACAACAAAACCAATAATAGGTTGTTCTTTCTCACAGATAAATGATTTCCCAGAAGATAAGGTAAAAAGCTGACCTTTTTTAGTTGGAGTGTTGTCAATTGGATTCTGTTTTGCCAGATTTAGTGGGAGGAGCACAATTTTCTTTCCCATCCATAGAAATTCGTAGGTGTTGTCGCGACCCTTATGTGTTGCTTGGACATCATATTGCCATGGACTGCCTAAAAGTATGTGACAAGCATCCATGTCTAAGACATCACAAATTATTTGGTCCTTGTAGCTTGCCCCAATGGATAAAGGAATAGTACTAGTATGTGTGACTTGAGCCTCACCCCCTTTCTTGATCCAACTAACCTTGTAAGGTGCTGAATGTGGATGTAAGGGTAGATTTAATGTGGATAATAACTTGTGACAATATTTTTTGTACTCCCGCTGTCAATAATGACCGTACAAATTTTTCCATTGATAGTGCATCTTGTCTTGAAAAGAGCATGTCTTTGATAGCTTGGGTCTATCTTTGGGGCTAGCAAGAGTCTTTGAATGACTAAAGATAGTGGTTCTCCTTCATCCGGTTCAAGAAAATCAATGTTTTCTTCGGAGTCATCTTCATCTCTTTCATCCACATAATCCACATTATCCGTAATTGTTAGGGTTCTTCTTTGCGGCATTCATTTGAAAGATGCCCAGTTTGATTGCACCTAAAACACTTGCCCAAGGTTGGTCTTGAATATGTATTTGTAGGTCTTCTTGTATTGTCAAGATTCTTGGAATCTTTATTTGGCCCATTGTCAACTTGTTTACCTTTCAAGATTGTCGATGAGGTTTGTGGAGGAATTCTTTCACCCAAAGCAACTTTGTTGGCAATTGCACCTTGTTCATTTGGTACCCGTCGTGAGTATTGGCGCTTGTAGCGGTTTGTAATTTGTTCTTCTATAGTTGCAGCTGTGGAAATTGCTTCATTGAGATAGACAATTGGTTGTAAAGAGATCTGTTCCTTAATATCATTCCTTAGACCTCCCTTATATCGTGCCACAAGGTATTGTTGACTTTCTCCCAAGTTTGTACGAGCACCTAACCGATGGAATTGCTCCGTATATTCCATAATAGAACGACTTCCTTGGCGAAAATTTTGGTATTGATCATAAAGAATCTGTTCATAATTTATTGGCAAGAACCGTTCTTTCATCAATTTTTTCATTCTTTCCCAACTTCTAATCGGTCTTTTCCCATACCTTTGGCGATTTAGTTCTAATTGATCCCACCAAGCTTGAGCTCCACCCTTGAGTTTCAATGCTACCAATCTAACTTTCTTGCTGTCCGGTGTGTTCATATAGTTGAAAAAGTTTTCCACGTGCCTGCTCCACTCCAATAAAGCTTCTATTTCCATTTTTCCACTGTATGTAGGGATATCCACCTTCATTTTGAAATCATTTTCTTGCTGTTGGTATTGGTATCGATGGTTTCTTTGTCTCTCAACTTGATTCTCAAAGAATTCATCTTCTTCCTCACTTGAAGTATCATCATTCCACTCTTGTCGCTTCCTATATAAAGGATTATTCTTGAGATATTAATGTATCATACGGTGTTCTTGGTAGAATCTTGGAGCTAAATCCATATCTTGAGTCATTTTCTACTCCACAGTGGGTCTTTGTTGTTGATATCCTTGTTGATATTTTGTCTTGCTGCTTTCTCCTTGGCGGTATTGTTGATCTTTCCCCCAATCTGTTTGTGCCATCAGGTTTGTAGCCGTTTGATCAGTCTTGATGCCAATCTTTTCCCATATCAACTCTAAAATCTTTTTAATCTCATCCACGTCGTTTTCAACTGACAGCAAGCGTGCAGTTGTTTCTTGTGGTGAGAGGACGAGAATAGTTTTCGTCTCTTTTTCGACCAAAGGTGAATCTCCACTCACATTTGTCGAGATTTTCTTGGTCGTCATGGAGGAAGCGCCAAAAAATCGTGCGCTCTGATACCAAATATGGTGTAGCCGAATCTTTAAGAAATAACAATAATGAGATGATCCTCTATTAATGAAGTTCCAACCCTTAAATAGGCAAAGGAACTAACTAAAAGTGGTTACAAGGCACATGTTTCTCACATGGCATACTAAAGAGATGATTAATTAAATAATACATATAAAGGCTACACCAGATTCATTATGGCATGAAATAAAATCGGTACAATAATATTTTTCTAAAATTAAGGAATTTGTTTAGATAATATTTTATATAATAATTGATCCTACAATTTTAATTGAAGAGAAATTATAACAAAAATGGTATAATGGTAACAAAAACTGCTAAAAATCTAATCTTGAAAATCTTCAAAACTATTGACATATATGAAAATATGCATCGCTCAAACAGTCCATCCACCAAAATTTCTCTTGATTTTATAGGACCAATCTAGCAGTTGATTATGTGTCCAAATGGATCAAGGCAATTGCCAGTAATGATATTCTTTTCTTAGTACTCATAATGATACCCTGGTAGTGTCCAAATTTCTGGAGAAGCATAACTTACTAGATTCGAGACACCGTGAGTGCTGATTAGAAATGAGGGAGTCATTCTATGAATAATGGAGAAGTTGTTAGCCAAGTATACAATCAAACACAAGGTTACTATAATATATAGTGGCAGATCTAGAAATTAATGTTAGGGGGTTTGAATTTGTATAAAAATTATTTTGAACACATTGATATTAATTTGGTTAAAATACCATTTTTTGTTCATGTATTTGTGTTTCATCCCATTTTAGCCTTACACTTTCAAATGTCCAAATTTAGGCTCCATACTCTAAAAAAATCTTAAAAAGAGTCATTATTGTTAGTTTTGGAGTCTATTTTTATCAAAGTTGGCAAAAAAATAATAATAATAATTTCATTTAAGTTTTCTTAAAAAAAAAAACATTTAAAAGAAAGATATAGTTTGCATATATTTCTAAAATTTATAGACAAAAGGCTAATAGATTATATATATTTTTTCTTAGAAAAGTTAACACTAAAAAAATATGGTGAACTAAGTTGATGATTTATTGAGAGTATAGAGACTAAATTTAGACATTATCTATATAAAAAAATAGAGCAATGAAAAGTATAAGAACTAAAATAGAACAAATCTCAAACTACATGAACCAAAATGATAGTTTAGCCTGTTCGTTTTTTTTTTTTTTTCCTTTTATAAGCATATGTAGAATTGTAGTTTCTTTTTAGGTAATTAATTTTTAATCATATTCATAAATATATTATAAATTTATTTAAATTATTTATAAGAAGTCGAAAAATATGATTTGTAAGATTTGTTTAAAAGGGAGTTTAAATTTCGTACATAAAAAATTGAAATATATAATAAAAAAGACATATTTGCAAAATTTGTGTGTTTCGCGGGGTTTGAGCCTCGACCTAATGAAGCTTTGCAAAGTATCGAAGTATAAATTGAGTTTTTTCCCTAAATATTATATCATCTAAGCTTACCAACCAATTTTCAATGAACTAAATTAGAAAATGTCAAAATAGATGACTCTAATTTAGAAAAATAATACCCAAGCATATATTTAGCCATTCTATATTTTTGAAAAAAGCCATTCTATTTCGATAAATAACCAAACACCATAAAATAGAAATTGTGCTAGATGACAAGAAAAAATAAGGCATTCAGTTTTTTTGCTAAAAAGTTTTCGTATTCTTGGTGGTGGCTACCGCAAATCATAGGGCCTCCAGACGGGTGGTGATTTTCCATTTTTACCTCTGGGTATATCCGTGCATATACAAATGCCGTTTATAATGCCGTTACATGTACAAGATCTTTTTTGTTCCACATTTCGTGGGATCCTCGCATTGCCTATAACTGATTTCACCAGATCCCGTTTTCCACTCCTTCTAACAGTCAAAATTAGTTTTTGTTCATATGCTCGATTTGTACTCAATCTCCAACCTCTCTCTCAATTAGTTCAAATATATAGCTTATTCCAGGTCTTCTTTATACCACTCTTGGAATAGTGTCTGGTGTATTTTTATCAAAAAATTTACCATTAAGGCAAAATGGCGGGATATCAAATTACAATTTTGTTCGGTGGTGTTTGGGACGTGGCGGGACCTCTACAGTGGTTTCAAGTCTGGTGTTGTGATGTGTCCTTGTGATGCTAACCTCTCTCAACTCAAGGTATGTGCTGCGAAGTACCTCAATTTGGTTGAACAGTAATAGTATCTGTCGGTTGACACTCTTTAGGAACTGGTCAAGCAACTCGATAAATATCCTTTCAGAAGATAGAGATGTTTTTTTGATGGTAAACGGGTTTCAGAATGGCACGTACAAGGATTGTTGTGTAGTTGTGGACGTGTAGGGGTAGATACTGCTATACACAACGGGGGGCAGTCGCAAGCTCATCCTGAGGGGAGTCAAATTTTGTGTTTGTTAACTCAGATGGGATGGACGCATTGACCGACATAGTACCTGTATCGGAGGGGTGCGTATTTTCGTGCAAAAAAATCTCAAGAATGTAGTCTTTTTACTGGCCCTTAAAGGGAGTTTCCAATTCAAGACAATTAAATCCAATAGCAAGCAGTATACAGTGGCATGCATAGACGATGTTGGGTTTCATGCCCTAAAACTCATAGATCGTAAATGTAACATTTGACTTGCTTTAATGAAGTATTATTTCTATATATTTGTTTTGCCTAAATATAACCACAAATCCAATAAACTAAGAACCCATGGCTATATTATGTATACTTGAAGTGTATGTGTGACATAAGTATGGATCAAGTTCAAGTAAATAGTCTAAACGATCTATAGTATATGGATAAGGTTGGGTACCTTAATCCTGGGGACACTATTGGCGCGACTCGCTTTGTTCTTTAAAGACAGACGATGTGATCCTAATCGTTCATGTATAAGACATGTGAGTGAGGGCGTCTTGTGCAAAGAGTTTGCATAGAGATTGGACCAGGAGATAAGTCACTTTCACTTTACAACACCGTTTACTGTTGAAACTAAACATCTCATACATATAACCTAGGTAACTCGATCTTAATCCTGAGCTAACTATGAACTCTTGTTTATTTAGGATTATCCTTTGATTTGCATGGGTGAGAGTGGCCAAACATCGCCGACTCAATAAGCCTACCATTTTGGGGATAAGACTAAATGGATAGCTGGGGACATAACTTTGCAAGATGGAATTCATTGCTACCTGTTTTAGGGTTAGTAAAGGTTGTTCCCTTAAGTACTGTCTTCAAGTCTTGAACAAGGGGCCTCGCCCTCTCATAACCTTGAGAGGGACTTGGTTCAGTGATTGTATCGTGAACTAATTGTTCATTAGAGGATCAGTGGAACTTAAGGAACAATATGTAACTATAGGGGTAAAACGGACATTTGACCTAGCTCTAGTTACGAACAACCGGTGAAGGGTCGAATTACTAATCATGGTTATCGAAAGTGGACAAGAAATATATCTATAGTGAGGGGAGTTCAGCTACGGGCTATAGTGGAGTGTCTCGGAAGCTAACGAACGATGAATGACTTGATTAATTGAGATTAACCGGTTATCACCATTTCGTTGGAGCCCATGATCTGTAGGTCCATTAGGTCCCTCTACTAGCTCAATAGGAATTAAACTTGGAACAATATGATAGGTTAATATTTGAAACGTTCAAAATTGGAAAAGGATACAAAAGTCGGTTATATGCGATATTTAACGACATATTAGTTTAATTACGAATTAAACTTAAAAATGAGAGTTTTTTTTTTTTAGTACAAAAAAAATGAGAGTTGGATATATTTAAATATGATTTAAATATTAAACACGTGAATAAAGATTCATGTTCGAGAAATTTCGTTGGGAGAAAAACCAAGATTGCACAAGTGGTATTAATTTAATATAAGATATTAAATTAAATGATTTTATTTAAAATTAAATAAAGTTTTATTTAAATTAAAATAAAATTATAATTGAGTGGGATTGTTCAGATTTTATATTTAAAGTTATAAATTTTGAGTTTAAAAGAAATTTAAAATTTTGGTAATTTTTGGAGGTGGTGCTTAATGACTAATCACCTTAGATTAGCCTTCTTGCACCACCTAATCCATGACTCAAATAACTCCCAAATTGCTATCAATGTTTTGTGCAATTCTTGTGCATGATTTTTCTCTATATATAGAGGATGAGCTGATGAAAATTGGTAGGATTTCTTCAACCTAAAATGTTGCCAAAATTCTCCCAAGAACTTCCACGTTCATACTTTCAAGCTTGCTTATACCCATAAGCTTTCCTTTCCAATTCCTATCAATTGAGGATCCCACAATCCGTTCCAAGGCCTGAGGATAGTAGAGAAGATCCAAGTGGTTGTCCAAAAGCTGTTCGTGTGAATTATAAAGCATCGAATTATACGAATTGGGAGCTTCAAGAGGTAGGTACCTTATTACTCTGTTTTTTTGTTCTTATGAACAACATGACTTCAAGGATTAAATTGATCAAATTGTGTGCCTAAGATCCAAAATTGCTTCTGCATGTGTGATATTAACACCTACAGACGACTCATGCCCATGGTATATACGCGCTTTTACCTATCGCATGGGGTAGTTGTGGATTGTGAGGAAGTTTATCGACGAACACACTTGTTCTTTTGATGTCGTTCAGAATGATCACAGGCAAGCGACGACGAGTGTTGCGTGTGAGTATGCGAAGACTATAATGAGGATCACTAATAGGTTGCACTGTACACCTCGGGACATAATAGAGTATGCTAGGAAAACGCACGGGATCAATATTAGTTATGACAAAGCATGGAGAGGTAGAGAAAAGACGTTAAATGAGTTGAGAGGATCTCCTGAAGAGTCTTATGCTCAAATTCCAGCGTTTGCAGCTAGGTTGATCGAAAGAAATCCAGGTATATACCATTTGTATTAACAGTTTATAAGATTCCGTATTTAGTATATAATAATATTTACTATCAACATTTTTAGGTACGTACACCGCCCATGATATTGATTCAAATGACAGGTTCAAATTCTTCTTCATGAGTACTGCAGCATTCATAGACGGGTGGAAACACTGTCTCTCGGTTATTTTTGTAGATGGTACATCTTTGAAGAATAAATTCAGTGGCACCCTTTTGACGGCCTGCACATTTGAGGTGAGATTTTAA

mRNA sequence

ATGCCAACTACACGAACGCGTTGGATCATTGCGTTTGTATCCAAATACAAAGCGGGTCGTATCCATAGTGTCACTAGGATAAGAATCTTGGAGCTAAATCCATATCTTGAGTCATTTTCTACTCCACAGTGGGTCTTTGTTGTTGATATCCTTGTTGATATTTTGTCTTGCTGCTTTCTCCTTGGCGGTATTGTTGATCTTTCCCCCAATCTGTTTGTGCCATCAGATGGGATGGACGCATTGACCGACATAGTACCTGTATCGGAGGGGATCCCACAATCCGTTCCAAGGCCTGAGGATAGTAGAGAAGATCCAAGTGGTTGTCCAAAAGCTGTTCGTGTGAATTATAAAGCATCGAATTATACGAATTGGGAGCTTCAAGAGAATGATCACAGGCAAGCGACGACGAGTGTTGCGTGTGAGTATGCGAAGACTATAATGAGGATCACTAATAGGTTGCACTGTACACCTCGGGACATAATAGAGTATGCTAGGAAAACGCACGGGATCAATATTAGTTATGACAAAGCATGGAGAGGTAGAGAAAAGACGTTAAATGAGTTGAGAGGATCTCCTGAAGAGTCTTATGCTCAAATTCCAGCGTTTGCAGCTAGGTTGATCGAAAGAAATCCAGGTACGTACACCGCCCATGATATTGATTCAAATGACAGGTTCAAATTCTTCTTCATGAGTACTGCAGCATTCATAGACGGGTGGAAACACTGTCTCTCGGTTATTTTTGTAGATGGTACATCTTTGAAGAATAAATTCAGTGGCACCCTTTTGACGGCCTGCACATTTGAGGTGAGATTTTAA

Coding sequence (CDS)

ATGCCAACTACACGAACGCGTTGGATCATTGCGTTTGTATCCAAATACAAAGCGGGTCGTATCCATAGTGTCACTAGGATAAGAATCTTGGAGCTAAATCCATATCTTGAGTCATTTTCTACTCCACAGTGGGTCTTTGTTGTTGATATCCTTGTTGATATTTTGTCTTGCTGCTTTCTCCTTGGCGGTATTGTTGATCTTTCCCCCAATCTGTTTGTGCCATCAGATGGGATGGACGCATTGACCGACATAGTACCTGTATCGGAGGGGATCCCACAATCCGTTCCAAGGCCTGAGGATAGTAGAGAAGATCCAAGTGGTTGTCCAAAAGCTGTTCGTGTGAATTATAAAGCATCGAATTATACGAATTGGGAGCTTCAAGAGAATGATCACAGGCAAGCGACGACGAGTGTTGCGTGTGAGTATGCGAAGACTATAATGAGGATCACTAATAGGTTGCACTGTACACCTCGGGACATAATAGAGTATGCTAGGAAAACGCACGGGATCAATATTAGTTATGACAAAGCATGGAGAGGTAGAGAAAAGACGTTAAATGAGTTGAGAGGATCTCCTGAAGAGTCTTATGCTCAAATTCCAGCGTTTGCAGCTAGGTTGATCGAAAGAAATCCAGGTACGTACACCGCCCATGATATTGATTCAAATGACAGGTTCAAATTCTTCTTCATGAGTACTGCAGCATTCATAGACGGGTGGAAACACTGTCTCTCGGTTATTTTTGTAGATGGTACATCTTTGAAGAATAAATTCAGTGGCACCCTTTTGACGGCCTGCACATTTGAGGTGAGATTTTAA

Protein sequence

MPTTRTRWIIAFVSKYKAGRIHSVTRIRILELNPYLESFSTPQWVFVVDILVDILSCCFLLGGIVDLSPNLFVPSDGMDALTDIVPVSEGIPQSVPRPEDSREDPSGCPKAVRVNYKASNYTNWELQENDHRQATTSVACEYAKTIMRITNRLHCTPRDIIEYARKTHGINISYDKAWRGREKTLNELRGSPEESYAQIPAFAARLIERNPGTYTAHDIDSNDRFKFFFMSTAAFIDGWKHCLSVIFVDGTSLKNKFSGTLLTACTFEVRF
Homology
[Close]
BLAST of Spg027447 vs. NCBI nr
Match: KAA0061274.1 (uncharacterized protein E6C27_scaffold455G001170 [Cucumis melo var. makuwa])

HSP 1 Score: 172.6 bits (436), Expect = 4.8e-39
Identity = 75/144 (52.08%), Postives = 104/144 (72.22%), Query Frame = 0 

Query: 125 ELQENDHRQATTSVACEYAKTIMRITNRLHCTPRDIIEYARKTHGINISYDKAWRGREKT 184
           ++ +NDH+QAT+ +  E  K I ++ ++  C P D+I Y +  HG+NISYDKAWRGRE  
Sbjct: 188 DVVKNDHKQATSWIVSECTKLIFKMNDKAPCRPSDVINYMKIHHGVNISYDKAWRGREIA 247

Query: 185 LNELRGSPEESYAQIPAFAARLIERNPGTYTAHDIDSNDRFKFFFMSTAAFIDGWKHCLS 244
           LN +RG+PE+SYA + AF+  LI  NPGTYTA + D   RFKF+FM+ AA ID W +C+ 
Sbjct: 248 LNSIRGTPEDSYAMLSAFSDALIRNNPGTYTAEEADDEGRFKFYFMALAASIDAWNYCVL 307

Query: 245 VIFVDGTSLKNKFSGTLLTACTFE 269
           VI VDG ++KNK+ GTL++ACT +
Sbjct: 308 VISVDGAAMKNKYLGTLISACTID 331

[Close]
BLAST of Spg027447 vs. NCBI nr
Match: TYK29863.1 (MuDRA-like transposase [Cucumis melo var. makuwa])

HSP 1 Score: 172.2 bits (435), Expect = 6.3e-39
Identity = 75/144 (52.08%), Postives = 103/144 (71.53%), Query Frame = 0 

Query: 125 ELQENDHRQATTSVACEYAKTIMRITNRLHCTPRDIIEYARKTHGINISYDKAWRGREKT 184
           ++ +NDH+QAT+ +  E  K I +  ++  C P D+I Y +  HG+NISYDKAWRGRE  
Sbjct: 136 DVVKNDHKQATSWIVSECTKLIFKTNDKAPCRPSDVINYMKIHHGVNISYDKAWRGREIA 195

Query: 185 LNELRGSPEESYAQIPAFAARLIERNPGTYTAHDIDSNDRFKFFFMSTAAFIDGWKHCLS 244
           LN +RG+PE+SYA + AF+  LI  NPGTYTA + D   RFKF+FM+ AA ID W +C+ 
Sbjct: 196 LNSIRGTPEDSYAMLSAFSDALIRNNPGTYTAEEADDEGRFKFYFMALAASIDAWNYCVP 255

Query: 245 VIFVDGTSLKNKFSGTLLTACTFE 269
           VI VDG ++KNK+ GTL++ACT +
Sbjct: 256 VISVDGAAMKNKYLGTLISACTID 279

[Close]
BLAST of Spg027447 vs. NCBI nr
Match: TYK21259.1 (protein FAR1-RELATED SEQUENCE 4 [Cucumis melo var. makuwa])

HSP 1 Score: 168.7 bits (426), Expect = 6.9e-38
Identity = 84/200 (42.00%), Postives = 122/200 (61.00%), Query Frame = 0 

Query: 74  PSDGMDALTDIVPVSE-----GIPQSVPRPEDSREDPSGCPKAVRVNYKASNYTNWELQE 133
           P + +  + D VPV++      +   +PR EDSR +               +  + ++ +
Sbjct: 72  PDNDLLIVVDTVPVTDIGNTPYMSSELPRTEDSRTE-------------NIHMCSVDVVK 131

Query: 134 NDHRQATTSVACEYAKTIMRITNRLHCTPRDIIEYARKTHGINISYDKAWRGREKTLNEL 193
           NDH+QAT+ +  E  K I +  ++  C P D+I Y +  HG NISYDKAWRG E  LN +
Sbjct: 132 NDHKQATSWIVSECTKLIFKTNDKAPCCPSDVINYMKIHHGGNISYDKAWRGHEIALNSI 191

Query: 194 RGSPEESYAQIPAFAARLIERNPGTYTAHDIDSNDRFKFFFMSTAAFIDGWKHCLSVIFV 253
           RG+PE+SYA + AF+  LI  NPGTYTA + D   RFKF+FM+ AA ID W +C+ VI V
Sbjct: 192 RGTPEDSYAMLSAFSDALIRNNPGTYTAEEADDEGRFKFYFMALAASIDAWNYCVPVISV 251

Query: 254 DGTSLKNKFSGTLLTACTFE 269
           +G ++KNK+ GTL++ACT +
Sbjct: 252 NGAAMKNKYLGTLISACTID 258

[Close]
BLAST of Spg027447 vs. NCBI nr
Match: XP_008455803.1 (PREDICTED: uncharacterized protein LOC103495899 [Cucumis melo])

HSP 1 Score: 167.2 bits (422), Expect = 2.0e-37
Identity = 82/178 (46.07%), Postives = 117/178 (65.73%), Query Frame = 0 

Query: 103 EDPSGCPKAVRVN-YKASN--------YTNW---ELQENDHRQATTSVACEYAKTIMRIT 162
           +DPS CP  +R + +K S+        YT+    ++ +NDH+QAT+ +  E  K I +  
Sbjct: 178 KDPS-CPWYLRASVFKRSDIWIVRKFIYTHMCSVDVVKNDHKQATSWIVSECTKLIFKTN 237

Query: 163 NRLHCTPRDIIEYARKTHGINISYDKAWRGREKTLNELRGSPEESYAQIPAFAARLIERN 222
           +++ C P D+I Y +  H +NISYDKAW GRE  LN +RG+PE+SYA + AF+  LI  N
Sbjct: 238 DKVPCRPSDVINYMKIHHSVNISYDKAWGGREIALNSIRGTPEDSYAMLSAFSDALIRNN 297

Query: 223 PGTYTAHDIDSNDRFKFFFMSTAAFIDGWKHCLSVIFVDGTSLKNKFSGTLLTACTFE 269
           PGTYTA + D   RFKF+FM+ AA ID W +C+ VI VDG ++KNK+ GTL++ CT +
Sbjct: 298 PGTYTAEEADDEGRFKFYFMALAASIDAWNYCVPVISVDGAAMKNKYLGTLISTCTID 354

[Close]
BLAST of Spg027447 vs. NCBI nr
Match: KAA0064137.1 (MuDRA-like transposase [Cucumis melo var. makuwa] >TYK28603.1 MuDRA-like transposase [Cucumis melo var. makuwa])

HSP 1 Score: 163.7 bits (413), Expect = 2.2e-36
Identity = 71/144 (49.31%), Postives = 101/144 (70.14%), Query Frame = 0 

Query: 125 ELQENDHRQATTSVACEYAKTIMRITNRLHCTPRDIIEYARKTHGINISYDKAWRGREKT 184
           ++ +NDH+QAT+ +  E  K I ++ ++  C P ++I Y +  H +N+SYDKAWRGRE  
Sbjct: 216 DVVKNDHKQATSWIVSECTKLIFKMNDKAPCCPSNVINYMKIHHDVNVSYDKAWRGREIA 275

Query: 185 LNELRGSPEESYAQIPAFAARLIERNPGTYTAHDIDSNDRFKFFFMSTAAFIDGWKHCLS 244
           LN +RG+PE+SYA + AF+  LI  NPGTYTA + D    FKF+FM  AA ID W +C+ 
Sbjct: 276 LNSIRGTPEDSYAMLSAFSDALIRNNPGTYTAEEADDEGWFKFYFMVLAASIDAWNYCVP 335

Query: 245 VIFVDGTSLKNKFSGTLLTACTFE 269
           VI VDG ++KNK+ GTL++ACT +
Sbjct: 336 VISVDGAAMKNKYLGTLISACTID 359

[Close]
BLAST of Spg027447 vs. ExPASy TrEMBL
Match: A0A5A7V1Z6 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold455G001170 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 2.3e-39
Identity = 75/144 (52.08%), Postives = 104/144 (72.22%), Query Frame = 0 

Query: 125 ELQENDHRQATTSVACEYAKTIMRITNRLHCTPRDIIEYARKTHGINISYDKAWRGREKT 184
           ++ +NDH+QAT+ +  E  K I ++ ++  C P D+I Y +  HG+NISYDKAWRGRE  
Sbjct: 188 DVVKNDHKQATSWIVSECTKLIFKMNDKAPCRPSDVINYMKIHHGVNISYDKAWRGREIA 247

Query: 185 LNELRGSPEESYAQIPAFAARLIERNPGTYTAHDIDSNDRFKFFFMSTAAFIDGWKHCLS 244
           LN +RG+PE+SYA + AF+  LI  NPGTYTA + D   RFKF+FM+ AA ID W +C+ 
Sbjct: 248 LNSIRGTPEDSYAMLSAFSDALIRNNPGTYTAEEADDEGRFKFYFMALAASIDAWNYCVL 307

Query: 245 VIFVDGTSLKNKFSGTLLTACTFE 269
           VI VDG ++KNK+ GTL++ACT +
Sbjct: 308 VISVDGAAMKNKYLGTLISACTID 331

[Close]
BLAST of Spg027447 vs. ExPASy TrEMBL
Match: A0A5D3E198 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold208G001100 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 3.0e-39
Identity = 75/144 (52.08%), Postives = 103/144 (71.53%), Query Frame = 0 

Query: 125 ELQENDHRQATTSVACEYAKTIMRITNRLHCTPRDIIEYARKTHGINISYDKAWRGREKT 184
           ++ +NDH+QAT+ +  E  K I +  ++  C P D+I Y +  HG+NISYDKAWRGRE  
Sbjct: 136 DVVKNDHKQATSWIVSECTKLIFKTNDKAPCRPSDVINYMKIHHGVNISYDKAWRGREIA 195

Query: 185 LNELRGSPEESYAQIPAFAARLIERNPGTYTAHDIDSNDRFKFFFMSTAAFIDGWKHCLS 244
           LN +RG+PE+SYA + AF+  LI  NPGTYTA + D   RFKF+FM+ AA ID W +C+ 
Sbjct: 196 LNSIRGTPEDSYAMLSAFSDALIRNNPGTYTAEEADDEGRFKFYFMALAASIDAWNYCVP 255

Query: 245 VIFVDGTSLKNKFSGTLLTACTFE 269
           VI VDG ++KNK+ GTL++ACT +
Sbjct: 256 VISVDGAAMKNKYLGTLISACTID 279

[Close]
BLAST of Spg027447 vs. ExPASy TrEMBL
Match: A0A5D3DDB9 (Protein FAR1-RELATED SEQUENCE 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold101G00090 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 3.3e-38
Identity = 84/200 (42.00%), Postives = 122/200 (61.00%), Query Frame = 0 

Query: 74  PSDGMDALTDIVPVSE-----GIPQSVPRPEDSREDPSGCPKAVRVNYKASNYTNWELQE 133
           P + +  + D VPV++      +   +PR EDSR +               +  + ++ +
Sbjct: 72  PDNDLLIVVDTVPVTDIGNTPYMSSELPRTEDSRTE-------------NIHMCSVDVVK 131

Query: 134 NDHRQATTSVACEYAKTIMRITNRLHCTPRDIIEYARKTHGINISYDKAWRGREKTLNEL 193
           NDH+QAT+ +  E  K I +  ++  C P D+I Y +  HG NISYDKAWRG E  LN +
Sbjct: 132 NDHKQATSWIVSECTKLIFKTNDKAPCCPSDVINYMKIHHGGNISYDKAWRGHEIALNSI 191

Query: 194 RGSPEESYAQIPAFAARLIERNPGTYTAHDIDSNDRFKFFFMSTAAFIDGWKHCLSVIFV 253
           RG+PE+SYA + AF+  LI  NPGTYTA + D   RFKF+FM+ AA ID W +C+ VI V
Sbjct: 192 RGTPEDSYAMLSAFSDALIRNNPGTYTAEEADDEGRFKFYFMALAASIDAWNYCVPVISV 251

Query: 254 DGTSLKNKFSGTLLTACTFE 269
           +G ++KNK+ GTL++ACT +
Sbjct: 252 NGAAMKNKYLGTLISACTID 258

[Close]
BLAST of Spg027447 vs. ExPASy TrEMBL
Match: A0A1S3C300 (uncharacterized protein LOC103495899 OS=Cucumis melo OX=3656 GN=LOC103495899 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 9.7e-38
Identity = 82/178 (46.07%), Postives = 117/178 (65.73%), Query Frame = 0 

Query: 103 EDPSGCPKAVRVN-YKASN--------YTNW---ELQENDHRQATTSVACEYAKTIMRIT 162
           +DPS CP  +R + +K S+        YT+    ++ +NDH+QAT+ +  E  K I +  
Sbjct: 178 KDPS-CPWYLRASVFKRSDIWIVRKFIYTHMCSVDVVKNDHKQATSWIVSECTKLIFKTN 237

Query: 163 NRLHCTPRDIIEYARKTHGINISYDKAWRGREKTLNELRGSPEESYAQIPAFAARLIERN 222
           +++ C P D+I Y +  H +NISYDKAW GRE  LN +RG+PE+SYA + AF+  LI  N
Sbjct: 238 DKVPCRPSDVINYMKIHHSVNISYDKAWGGREIALNSIRGTPEDSYAMLSAFSDALIRNN 297

Query: 223 PGTYTAHDIDSNDRFKFFFMSTAAFIDGWKHCLSVIFVDGTSLKNKFSGTLLTACTFE 269
           PGTYTA + D   RFKF+FM+ AA ID W +C+ VI VDG ++KNK+ GTL++ CT +
Sbjct: 298 PGTYTAEEADDEGRFKFYFMALAASIDAWNYCVPVISVDGAAMKNKYLGTLISTCTID 354

[Close]
BLAST of Spg027447 vs. ExPASy TrEMBL
Match: A0A5A7VAU3 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2030G00150 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.1e-36
Identity = 71/144 (49.31%), Postives = 101/144 (70.14%), Query Frame = 0 

Query: 125 ELQENDHRQATTSVACEYAKTIMRITNRLHCTPRDIIEYARKTHGINISYDKAWRGREKT 184
           ++ +NDH+QAT+ +  E  K I ++ ++  C P ++I Y +  H +N+SYDKAWRGRE  
Sbjct: 216 DVVKNDHKQATSWIVSECTKLIFKMNDKAPCCPSNVINYMKIHHDVNVSYDKAWRGREIA 275

Query: 185 LNELRGSPEESYAQIPAFAARLIERNPGTYTAHDIDSNDRFKFFFMSTAAFIDGWKHCLS 244
           LN +RG+PE+SYA + AF+  LI  NPGTYTA + D    FKF+FM  AA ID W +C+ 
Sbjct: 276 LNSIRGTPEDSYAMLSAFSDALIRNNPGTYTAEEADDEGWFKFYFMVLAASIDAWNYCVP 335

Query: 245 VIFVDGTSLKNKFSGTLLTACTFE 269
           VI VDG ++KNK+ GTL++ACT +
Sbjct: 336 VISVDGAAMKNKYLGTLISACTID 359

The following BLAST results are available for this feature:
BLAST of Spg027447 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0061274.14.8e-3952.08uncharacterized protein E6C27_scaffold455G001170 [Cucumis melo var. makuwa][more]
TYK29863.16.3e-3952.08MuDRA-like transposase [Cucumis melo var. makuwa][more]
TYK21259.16.9e-3842.00protein FAR1-RELATED SEQUENCE 4 [Cucumis melo var. makuwa][more]
XP_008455803.12.0e-3746.07PREDICTED: uncharacterized protein LOC103495899 [Cucumis melo][more]
KAA0064137.12.2e-3649.31MuDRA-like transposase [Cucumis melo var. makuwa] >TYK28603.1 MuDRA-like transpo... [more]
BLAST of Spg027447 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg027447 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7V1Z62.3e-3952.08CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6... [more]
A0A5D3E1983.0e-3952.08MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2... [more]
A0A5D3DDB93.3e-3842.00Protein FAR1-RELATED SEQUENCE 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A1S3C3009.7e-3846.07uncharacterized protein LOC103495899 OS=Cucumis melo OX=3656 GN=LOC103495899 PE=... [more]
A0A5A7VAU31.1e-3649.31MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2... [more]
BLAST of Spg027447 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 89..109
NoneNo IPR availablePANTHERPTHR31973POLYPROTEIN, PUTATIVE-RELATEDcoord: 149..266
NoneNo IPR availablePANTHERPTHR31973:SF153FAMILY TRANSPOSASE, PUTATIVE ISOFORM 1-RELATEDcoord: 149..266

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg027447.1Spg027447.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009987 cellular process
molecular_function GO:0003676 nucleic acid binding