Spg027429 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg027429
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Ty3-gypsy retrotransposon protein
Location	scaffold7: 42016749 .. 42025128 (+)
RNA-Seq Expression	Spg027429
Synteny	Spg027429

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAAACTCCTGTCATTGCAAACAAGATGCTGAGACGCATGACAGAATCTGCTCAACTTGAAATCGCCACTGCAGAAGATCTGATGCTTGGCAAATTCATCTCTTCTTCTCAGCAACCAAACGAAACATCCAGTCCTGATGTGATGTCTGTTATGATGACTGATGCTGGAACTAGTGAAGAACGAATGGCTGAAGTTGAGAAGAAAATCAGCATGTTACTGAAGATGGTCGAAGAGAAAGACCAAGAAATCGCCTCTCTCAGGAACCAGATGGAAAGTCGGGATGTTGCTGAATCGAGTCAGACCCCTGCCATCAAAGATAAGGGAAAGATTATTGCACAAGATCAGTCCCAACATTCCGCTTCTATTGCTTCACTGTCCGTCCAGCAACTCCAGGATATGATCATGAATTACATCAGAGCTCAATATGGTGGACCGACTCAGAACTCTCTCTTGTATTCCAAGCCATATACCAAGAGAATCGACAATCTGAGAATGCCTCATGGATACCAGCCACCGAAGTTTCAACAATTTGACGGGAATGGCAATCCCAAACAGCACGTTGCTCATTTCGTCGAGACATGTGAAAACGCTGGTACTATAGGAGACTTACTAGTCAGGCAGTTCGTACGAACACTGAAGGGGAATGCTTTCGACTGGTATACCGACCTTGAGCCTAAGACTATCGATAGTTGGGAACAACTTGAGAAGGAGTTCCTCAACCGCTTCTACAGCAGAAGACGAACCGTTAGTATGACGGAGCTCACCAGCGCTAAACAACGGAAAGGTGAACCAGTTGTTGACTACATCAACCGTTGGAGAGCTTTGAACTTAGATTGCAAGGACCGACTCACCAAATTGTTTGCTGTTGAAATGTGCACCCAAGGCATGCATTGGGGACTCCTTTATATCCTGCAAGGAATAAAGCCCCGCACTTTCGAGGAGTTGGCAACCCGCGCTCATGACATGGAATTGAGCATTGCTACTAGAGGGAACAAAGATTCTATTGTCCCCGATGGCAGTAAAGAAAAGAAAGAAGTTAAGAATACTGAGAAAACTACCAAAAGCACTACGAAAGAGTCAATGGTAGTCAATGCAGCTCCTTTCAAGTTTTCTTCGAAAGGAAAAGAAAAGAAGATAGAGAAACAACAAGAGGGAGGTGAGAGATGTCGTCTGACCTTGAAAGAAAGGCAAGAGAAAGTTTACCCTTTTCCAGATTCTGACATCTCAGATATGTTAGAAAAACTTCTGGAAAAACAACTTATTGAACTACCAGAATGCAAGCGACCAGAAGAGATGGGGAGAGTTAATGATCCCAACTACTACAAATATCACCGAGTCATCAGCCACCCGGTGGAAAAGTGCTTCGTTCTGAAGGAGCTAATTTTGAAGTTAGCTAAAGAAAAGAAGATTGAGTTAGATCTTGATGAGGTAGCTCAATCAAATCATGCGACGATAGCAACAAATCTGAACAACCGAGTAGCTCCAAGCCCGATTCATGATTCAATAGCAAGTTTGATCCAGTTCGGGACATTAGAGCCGATTGTTATTTGGCTTCAGCAAGAATCTGAAAGAGACATCTTCCAAGACCAACTTGAGTCTGTTGAAAATGAAGACGAACGATGGACTTTGGTAACTCGTCGAAAGAAGCAAAAGAAACATTCCGTTCAAAGAGAGCCTCACATGTTCCGTAACTACAGAAGAAAGAACATGTCACAAAAGCAGAAGAGAAAGATCAAAGGTTCAAGAAAGCCTAAACTAGTTGTCGAAGAGAATCAAGATTTTGTTCTGTCTCGACATCCGGTAACCCTTAAAGATTTCTTCCCAAAGAACTTTCTTAATGATGATCATGAGGACATCCCTGAGATAGTCGCATGTCATGCTGTCAATACACTTGAAGAAGGCAATTCTTCCTCAAGTCCATCTCAGGTGATGACAAGGCCAGAAGATTCACCTTCATTTACAATAGATGATTTGTTGTCACTTCCTCAAGCAACCAAAGATGCTATTGTTGAAACATTGAAAAGATCTAACGTTTCAGACATTCCAGACTTGCAAGAACACAGATGTGCCTCATGTTGTATGTCCATTAGCTTCACAGATGAAGACTTGATGTTGGGATCGAAGCCTCATAATAGGCCATTATTCGTCTCGGGATATATTCGAGAGCAAAAAGTTGGTCGAATTCTCATCGACGATGGATCTGCGGTAAATATAATGCCTAAGTCAACCATGACACAAATAGGAATTTCAATAAATGAACTATCAAATAGTAGGTTGGTTATTCAAGGCTTCAACCAAGGCGGCCAACGAGCAATCGGTATGATCCGTTTGGAGCTTGTTATTGGAGATTTGAAGGCCAACACTTTATTCCATATCATAGATTCCAAGACCACTTACAAGTTATTGTTAGGTCGTCCTTGGATTCATGGAAATGGAGTAATATCTTCTACACTTCATCAGTGTTCCAAGTTCTATCAAGACGGTGTCAAGAAAGTTGAAGCCGACACTAATCCATTCTCAGAGGCAGAATCTCACTTTGCAGATGCAAATTTTTATATGCAGAATGATAAAGCAGGAGAGATCATCCCAGGTGAGATTCCTCTGATTGAAAGTCAGAAAGTAGAGCATCCAAAGAATGCGAAGAAGGAGTCGATCGAAGAAGTAGATGCTTGTGAAGTTCAATCAAAGGAAGCATCCGCTCACCCTGAAAAATCGAAAGCTCCAAAGGAAGAGGCATCGTCAAATGTCCCTATTGATGCGCAAATTGCTAACCGCAAGTGTACGAGTCAAGTAATAATATAGTGTTTTCGTGTAAAACGAGTGTCGTCCTCTGGATTGGTTTTCTAGCAAATTAAGTATCGTGAATACTTTTGTCCAATTTTATTTAGGGAGCAAAACTCAATGATAAAGATAAAAGTAAAGACTAAAAGCATAAAAATAAAAGTGGAGACTCAAATGGAAAGACTCTTAGGGAATTGATTTCATTGATTAAGATTGAGGATTGATTAATAGGAATGAATTGACCGTGCAATTATTCTACAAGCCAAGGAAACTTTATCACGATTACCTCTCCCGAGTATAATTGATTCTCATGCATATAAACTAACTTGATATCCCTATCTAAGTTCATTAACATGCAAGGCATTATTCGGTTCGGTCCTTGTTACGCTTCTAAAGATATTCCAAATCCCGTCACAAACTTAGACTTTCTACTCTAGTCATGCAATTAAACAAAGTAAGTCTTAGGCCAAATCCTCCCTCACGAGTTAGATTCAACACTTAAATCATTCAATTAGTGATCAAGTAATTGAAAGCATTACACATAAAATTGCATGAATAGAATAAGAACACATTCATACTCAAAATTCAATCCAACAATTTAAGCAACTACATCAATCCCTAAGACAAACAACTAGCAATTCATAGTCTTTAAACTACAAACACTAATTGAAAGAAAAGCCATAAAAACTACAAGAGTTAAGGGAAAGAGAAAGGAAAACTCGAATCCGCCGACACCGCATGTCCCCGTCACGATCTCCACGTCTTCTCGCTTGATTCTCGCTCCTTGGCCTTGCCTTTAGCTCCCACAAAAGGTCTCTAGTCGAAATTAGGGCTAAAATCTAACCAATTGGACTCCCCTTGGCCGTAGCATGAAAAGATGAATTTATAGAAAATCTGGCGACAGCGTCGAGACGCTATGGACAGCGTCGCGACGCTGTCGCGATACCGCATTTTTGGAAATTTTTCCTATATTTTTTTTTAATTTTTAGATTGAAGACTCTATTTGACTCTAATTGCTGAATTAAGCTTCAAACACATACTTCCTACAAATAAAACATAAAAATGCATAAATTTGGGCAAATAATTGTAAAAGACTAGCTTAATTAATCAGAGAAAAATAGCTAGCTAGGCTCGCTATCAAATACCCCCAAACTTAAGCTTTTGCTAGTCCTCGAGCAAACTAAAAATCAAGCATACAGTGGAAGAATGGATGCAACAAACATGACTCAATCCTCAAGGCTCAAAAGTCAATAGTCAAGCAATCAAGAGACATGCACATAAAGACCAATGAGGGAGACAAATCAAAAGTTTTCCAAAATTAACTTGCACAAGCGAGATCTAACTCAACTAGATCAGACTCTACTAGCCCGGGATTGGATTATTAAACTCTCAACTCATCTTCCCTCTACACTGGCACTAAGGATTCACTAACGAGTCAATGGAACAAATTAGTTTGTTTTCATCCACACTTAGGTGCTTATAATTGAAAATTTAATCAAGCATTTATATGTGGCACTAGCTTTCACACACCTATTGCAGGGACCCTTAACCTGAGTTTTCTCTGGTTGGCCTAACTGATCACAACAGGGGTAGCTCTTTTTGCCTAAATCATTATTACTCATTGCAAACTGTGCACAGGCCATGACTTTTTTTTTTTTTTTTCCTTTCAAATTGTGACAACAAGAATGATTTTTCTTTAAGAGCATGATAAGCATATATTCTTTTCTTTCCTCCTAAGCAAGATCAAACATGCTAATTTGCAAAAAATTAACTCTTTAGCTCTTCCCTACACCTATCGAGGTGACAACAAGCATATGAACCTAATAATTCGCTCCTAAGCATTCAAATCCAAATCTAGCCAAGAAAAATACTCTACTCATGCAAGACATCTCATAGAAAAAGTTTAAAAAGTCTCCCTTTTTGGGCACTCATGCTTACAACTCATCTTGAAAATTGACAAGAAAGCCTATCCTAGGAAATCATAGTCATGCAAAAATAGCATCCAGAAAACAACCATATGCTCAATTCAAAGAAAGCTCAAAACTATAGCCCGAACTCAGATGCTCAAGGGCTCCACAAACATGCTATTCCACCCCCAAACTTAAAACATGGATTGTCCTCAATGTATAAATCAATAAAGCATACATAAGCATGAGAAAAAGAAAAGAATGGAAGGGGTGAACAATACTGCCCTGGAATGATGACCTTTTCATGAATGCTTGGCAAAGGCGAGAACACGGGAACACCTACAAAACAAAAACAACAAAAAGATCAAAGACATAAAAGAGAAAAAACAAACTAACTTGGGTTGCCTCCCATAAGCGCTTGTTTAACGTCTTTAGCTCGACGTGCTCGTGCAGTCTGTCAAGGCACATAAAAATTCTCGTATTTCTCTGGACCCTTCTTTCTTGAATCGATAAAACCAACGATCGCTAGCAAACTTACTAGCTTCTCATGGGCCCCTGAAATAGGATTAGTTTTTGAATTTTTGAACAAAATAAACATAAAAGGAGAAATATCAAAATAAAGAGACTCTGACTCTATAATTGACTCGTGAGAATAGAAAAAAGAACAATCAAAATCTACAAAGGATGAAGAAGATAAAACAGACGAAAGCTTTTCAACCTCAAACTCTACCTCCTGAACTTCCTCTGTCACTGCAAGCTCATTTTCTTTTTCTTCCTCACAAACATGCTCTTGATAGGTGCTACAACTCTCCAATTCTTCCCCACTATTCATGCAACTCACCCCTAAATGCTCAACCATAGCAAAATCGAAAGAATTATGCTCCTGGATAGGTGCCAATGAATCATCGGCCACATGACTCACTAGATATCCTATGGAAGTCGATCCCACCTCACTAACTTCCTTTGGGGTCTGAAGTCCTTTTATAATTTCATCAAATTTTAGACTCCTCGCTCTAGACTCCTCAATATAATTTTGAATTATGCTTTCTAAGGAAGAATTTTCTTTTAAAGGGGTAAAACTTGAAGATGAAAAATTGGAATATGGTGTTGAATAAAAAGCCATTCAATTAAAGCATCAATGATAATTAGGCTTCCAATCAAATAATAACCCAACAAGAACAAAGGACTAAGACTCAAACAAAAAAGGAAAGAAAGAAAAAAAAATAAAAAATAAAAACAAAAGCAAATAAGGGGAAAAAAATCAAACAAGTAAGGAAAGAACTAAAATAGGAAACTAACAAATATGGAAAGAAAACAAATAAGGAAAAAGAAAAGTAATCTATCTACAAAATAAAAATAAAAATAAAAAATAAAAAATAAAAATAAAGAATGCAAAAACAAATATGGCAAAAACAAATAAGGAAACTAGCAAATAAGGAAAAACTATACTAAAAAGGAAAAAACTAAAAAGAAAAATTATATCTATGGAAAACTCAAACAAATATGGAAAAATCTAAATATGGAAAACAAACCAACAAAGGAAAAAAAATGCAATCTACCTAAAAACAAAACTAACAAAAATAACAAAAAATAAAATACACCCTAAACTAAGACCGGACAATTTTTCCACAATATTAATTTAACTAAATATACCAATCCCCGGCAACGGCGCCAAAAACTTGATGAGCAAATTGCTAACCGCAAGTGTACGGGTCAAGTAATAATATAGTGTTTTCGTGTAAAACGAGTGTCATTCTCTGGATTGGTTTTCTAGCAAATTAAGTATCGTGAATACTTTTGTCCAATTTTATTTAGGGAGCAAAACTCAATGATAAAGATAAAAGTAAAGACTAAAAGCATAAAAATAAAAGTGGAGACTCAAATGGAAAGACTCTTAGGGAATTGATTTCATTGATTAAGATTGAGGATTGATTAATAGGAATGAATTGACCGTGCAATTATTCTACAAGCCAAGGAAACTTTTATCACGATTACCTCTCCCGAGTATAATTGATTCTCATGCATATAAACTAACTTGATATCCCTATCTAAGTTCATTAACATGCAAGGCATTATTCAGTTCGGTCCTTGTTACGTTTCTAAAGATATTCCAAATCCCGTCACAAACTTAGAATTTCTACTCTAGTCATGCAATTAAACAAAGTAAGTCTTAGGCCAAATCCTCCCTCCCGAGTTAGATTCAACACTTAAATCATTCAATTAGTGATCAAGTAATTGAAAGCATTACACATAAAATTGCATGAATAGAATAAGAACACATTCATACCCAAAATTCAATCCAACAATTTAAGCAACTACATCAATCCCTATGACAAACAACTAGCAATTCATAGTCTTTAAACTACAAACACTAATTGAAAGAAAAGCCATAAAAACTACAAGAGTTAAGGGAAAAAGAAAGGAAAACTCGAATCCGCCGACACCGCACGTCCCCGTCACGATCTCCACGTCTTCTCGCTTGATTCCCGCTCCTTGGCCTTGCCTTTAGCTCCCACAAAAGGTCTCTAGTCGAAATTAGGGCTAAAATCTAACCAATTGGACTCCCCTTGGTCGTAGCATGAAAAGATGAATTTATAGAAAATCTGGCGACAGCGTCGAGACGCTATGGACAGCGTCGCGACGCTGTCGCGATACCGCATTTTTGGAAATTTTTCCTATAGCGTCGCAACGCTATGAATTTTTTTTTTTTTTTTTTAGATTGAAGACTCCATTTGACTCCAATTGCTGAATTAAGCTTCAAACACATACTTCCTACAAATAAAACATAAAAATGCATAAATTTGGGCAAATAATTGTAAAAGACTAGCTTAATTAATCAGAGAAAAATAGCTAGCTATGCTCGCTATCACCTATATTGTGCTACGTTCCTTTATCTCGACGCAAGAAAGGGGAATCACCATTCACAGAATGTTCAGAAATTTTGAAGGTTGGTGATGTGGAGATTTTAAAAGAAAATTTCACCACACCTCTGACAGCAATTACCAAGCAAGAGATTCAGGAATCAAAGACTGATCGTACCAAAGTAACTTTGCCGGAAAGACGAACGAAGGCTGGATTTGACCCAAATGCATACAAACTCCTAGAAAAGGCAGGATACGACTTTACAACTCATACTGAGTTTGAAAGTCTAAAAATCTTTGATGGGAGATCTGAGCTTTCTCCGACACAGAAGAAGCTCCAAAAAGAAGGTTATACCATACCATCCTCGAGAGTCGGACTAGGGTACAATCCCCCAAAGCCAGTTCGTATAACCAGAAAATGGAAAGTTGCAGATGCACATCACATAACGATAGAAGAGATGAGCGATCCAGAAGATAAAAAGAACGATGATAGCCAGAAAATCTCTGTCTTCGATCGCATTAAAGCGCCGACTACTCGTCTTTCAGTTCATCAGCGGCTGAAATATTCATCTTCGGAAAAGGAAGGTCAGAGCAAAACTTCTGCTCCTGCCCGACGTTCAGTGTTTCATCGTTTGAGTGTGTCTACATCAAAGAAAGTAGATGAACCTTCGAGATCCGTGTTCGACCGCCTTCGAGCAACATATGGCCAATGCAAGGGAAAGTTGAAAAGTTTTGAAACAGAAGAATCCGACGAGATGAATGACAACAACGAATTTTCCAGTACTGTTCCTTCACGGATGAAGAGAAAACCTTTTGTTCTCATAAATACA

mRNA sequence

ATGCTGAGACGCATGACAGAATCTGCTCAACTTGAAATCGCCACTGCAGAAGATCTGATGCTTGGCAAATTCATCTCTTCTTCTCAGCAACCAAACGAAACATCCAGTCCTGATGTGATGTCTGTTATGATGACTGATGCTGGAACTAGTGAAGAACGAATGGCTGAAGTTGAGAAGAAAATCAGCATGTTACTGAAGATGGTCGAAGAGAAAGACCAAGAAATCGCCTCTCTCAGGAACCAGATGGAAAGTCGGGATGTTGCTGAATCGAAATCTGAAAGAGACATCTTCCAAGACCAACTTGAGTCTGTTGAAAATGAAGACGAACGATGGACTTTGGTAACTCGTCGAAAGAAGCAAAAGAAACATTCCGTTCAAAGAGAGCCTCACATGTTCCGTAACTACAGAAGAAAGAACATGTCACAAAAGCAGAAGAGAAAGATCAAAGGTTCAAGAAAGCCTAAACTAGTTGTCGAAGAGAATCAAGATTTTGTTCTGTCTCGACATCCGGTAACCCTTAAAGATTTCTTCCCAAAGAACTTTCTTAATGATGATCATGAGGACATCCCTGAGATAGTCGCATGTCATGCTGTCAATACACTTGAAGAAGGCAATTCTTCCTCAAGTCCATCTCAGAATGCGAAGAAGGAGTCGATCGAAGAAGTAGATGCTTGTGAAGTTCAATCAAAGGAAGCATCCGCTCACCCTGAAAAATCGAAAGCTCCAAAGGAAGAGGCATCGTCAAATGTCCCTATTGATGCGCAAATTGCTAACCGCAAGTGTACGAGTCAAAAAGGGGAATCACCATTCACAGAATGTTCAGAAATTTTGAAGGTTGGTGATGTGGAGATTTTAAAAGAAAATTTCACCACACCTCTGACAGCAATTACCAAGCAAGAGATTCAGGAATCAAAGACTGATCGTACCAAAGTAACTTTGCCGGAAAGACGAACGAAGGCTGGATTTGACCCAAATGCATACAAACTCCTAGAAAAGGCAGGATACGACTTTACAACTCATACTGAGTTTGAAAGTCTAAAAATCTTTGATGGGAGATCTGAGCTTTCTCCGACACAGAAGAAGCTCCAAAAAGAAGGTTATACCATACCATCCTCGAGAGTCGGACTAGGGTACAATCCCCCAAAGCCAGTTCGTATAACCAGAAAATGGAAAGTTGCAGATGCACATCACATAACGATAGAAGAGATGAGCGATCCAGAAGATAAAAAGAACGATGATAGCCAGAAAATCTCTGTCTTCGATCGCATTAAAGCGCCGACTACTCGTCTTTCAGTTCATCAGCGGCTGAAATATTCATCTTCGGAAAAGGAAGGTCAGAGCAAAACTTCTGCTCCTGCCCGACGTTCAGTGTTTCATCGTTTGAGTGTGTCTACATCAAAGAAAGTAGATGAACCTTCGAGATCCGTGTTCGACCGCCTTCGAGCAACATATGGCCAATGCAAGGGAAAGTTGAAAAGTTTTGAAACAGAAGAATCCGACGAGATGAATGACAACAACGAATTTTCCAGTACTGTTCCTTCACGGATGAAGAGAAAACCTTTTGTTCTCATAAATACA

Coding sequence (CDS)

ATGCTGAGACGCATGACAGAATCTGCTCAACTTGAAATCGCCACTGCAGAAGATCTGATGCTTGGCAAATTCATCTCTTCTTCTCAGCAACCAAACGAAACATCCAGTCCTGATGTGATGTCTGTTATGATGACTGATGCTGGAACTAGTGAAGAACGAATGGCTGAAGTTGAGAAGAAAATCAGCATGTTACTGAAGATGGTCGAAGAGAAAGACCAAGAAATCGCCTCTCTCAGGAACCAGATGGAAAGTCGGGATGTTGCTGAATCGAAATCTGAAAGAGACATCTTCCAAGACCAACTTGAGTCTGTTGAAAATGAAGACGAACGATGGACTTTGGTAACTCGTCGAAAGAAGCAAAAGAAACATTCCGTTCAAAGAGAGCCTCACATGTTCCGTAACTACAGAAGAAAGAACATGTCACAAAAGCAGAAGAGAAAGATCAAAGGTTCAAGAAAGCCTAAACTAGTTGTCGAAGAGAATCAAGATTTTGTTCTGTCTCGACATCCGGTAACCCTTAAAGATTTCTTCCCAAAGAACTTTCTTAATGATGATCATGAGGACATCCCTGAGATAGTCGCATGTCATGCTGTCAATACACTTGAAGAAGGCAATTCTTCCTCAAGTCCATCTCAGAATGCGAAGAAGGAGTCGATCGAAGAAGTAGATGCTTGTGAAGTTCAATCAAAGGAAGCATCCGCTCACCCTGAAAAATCGAAAGCTCCAAAGGAAGAGGCATCGTCAAATGTCCCTATTGATGCGCAAATTGCTAACCGCAAGTGTACGAGTCAAAAAGGGGAATCACCATTCACAGAATGTTCAGAAATTTTGAAGGTTGGTGATGTGGAGATTTTAAAAGAAAATTTCACCACACCTCTGACAGCAATTACCAAGCAAGAGATTCAGGAATCAAAGACTGATCGTACCAAAGTAACTTTGCCGGAAAGACGAACGAAGGCTGGATTTGACCCAAATGCATACAAACTCCTAGAAAAGGCAGGATACGACTTTACAACTCATACTGAGTTTGAAAGTCTAAAAATCTTTGATGGGAGATCTGAGCTTTCTCCGACACAGAAGAAGCTCCAAAAAGAAGGTTATACCATACCATCCTCGAGAGTCGGACTAGGGTACAATCCCCCAAAGCCAGTTCGTATAACCAGAAAATGGAAAGTTGCAGATGCACATCACATAACGATAGAAGAGATGAGCGATCCAGAAGATAAAAAGAACGATGATAGCCAGAAAATCTCTGTCTTCGATCGCATTAAAGCGCCGACTACTCGTCTTTCAGTTCATCAGCGGCTGAAATATTCATCTTCGGAAAAGGAAGGTCAGAGCAAAACTTCTGCTCCTGCCCGACGTTCAGTGTTTCATCGTTTGAGTGTGTCTACATCAAAGAAAGTAGATGAACCTTCGAGATCCGTGTTCGACCGCCTTCGAGCAACATATGGCCAATGCAAGGGAAAGTTGAAAAGTTTTGAAACAGAAGAATCCGACGAGATGAATGACAACAACGAATTTTCCAGTACTGTTCCTTCACGGATGAAGAGAAAACCTTTTGTTCTCATAAATACA

Protein sequence

MLRRMTESAQLEIATAEDLMLGKFISSSQQPNETSSPDVMSVMMTDAGTSEERMAEVEKKISMLLKMVEEKDQEIASLRNQMESRDVAESKSERDIFQDQLESVENEDERWTLVTRRKKQKKHSVQREPHMFRNYRRKNMSQKQKRKIKGSRKPKLVVEENQDFVLSRHPVTLKDFFPKNFLNDDHEDIPEIVACHAVNTLEEGNSSSSPSQNAKKESIEEVDACEVQSKEASAHPEKSKAPKEEASSNVPIDAQIANRKCTSQKGESPFTECSEILKVGDVEILKENFTTPLTAITKQEIQESKTDRTKVTLPERRTKAGFDPNAYKLLEKAGYDFTTHTEFESLKIFDGRSELSPTQKKLQKEGYTIPSSRVGLGYNPPKPVRITRKWKVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSEKEGQSKTSAPARRSVFHRLSVSTSKKVDEPSRSVFDRLRATYGQCKGKLKSFETEESDEMNDNNEFSSTVPSRMKRKPFVLINT

Homology

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BLAST of Spg027429 vs. NCBI nr
Match: TYK05005.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 244.2 bits (622), Expect = 2.5e-60
Identity = 208/637 (32.65%), Postives = 282/637 (44.27%), Query Frame = 0


Query: 98  QDQLESVENEDERWTLVTRRKKQKKHSVQREPHMFRNYRRKNMSQKQKRKIKGSRKPKLV 157
           Q++   +E +DERWT+VTRRKK+K   +Q+E   +RNYRR N +QK K+K K +RK KL+
Sbjct: 364 QEKERLIEEDDERWTIVTRRKKRKSTPIQKEHRFYRNYRRWNKAQKNKKK-KKTRKLKLM 423

Query: 158 VEENQDFVLSRHPVTLKDFFPKNFLNDDHEDIPEIVACHAVNTLEEG------------- 217
            +E++DF  ++  +TL DFFP  FL D  ++ P +VACHA+N  EE              
Sbjct: 424 HKEDKDFPRTQRLITLADFFPTRFLGDHQDENPGVVACHAINATEEESIPLRSLEEEKVS 483

Query: 218 ---------------------------NSSSSPSQNA----------------------- 277
                                      NS++S S  +                       
Sbjct: 484 KDLSRFNVDDLLSLPQEIKTILINALLNSAASSSSASTVTYESTPYCMSIDFSNDDLLLG 543

Query: 278 ------------------------------------------------------------ 337
                                                                       
Sbjct: 544 SKLHNRPLYVSGYVREQRVDRILVDNGSAVNIMPKSTIRQLGILMKELSNSKLVIQGFNQ 603

Query: 338 ---------------------------------KKESIEEVDACEV-------------- 397
                                            K +S  EV + EV              
Sbjct: 604 GSQRVIDGVKKVEADSNPFSEAESHFADAKFYLKNDSSPEVVSVEVPLVNREDNLQLKSL 663

Query: 398 QSKE-----ASAHPEKSKAPKEEASSNVPIDAQIANRK-------CTSQKGESPFTECSE 457
            SKE      + H EKS+A    A S + +D + +N            +KGESPF E  +
Sbjct: 664 ASKEPHISIGTFHSEKSEASTSTAKSVILMDEKTSNPSILRYVPLSRRKKGESPFVESPQ 723

Query: 458 ILKVGDVEILKENFTTPLTAITKQEIQESKTDRTKVTLPERRTKAGFDPNAYKLLEKAGY 517
            LKVGD+E+LKE+FTTPLT ITKQEI   K D T+ +LP+RRTK  FDP AYKL+ KAGY
Sbjct: 724 GLKVGDIEVLKESFTTPLTKITKQEI---KIDLTEASLPQRRTKDEFDPKAYKLMAKAGY 783

Query: 518 DFTTHTEFESLKIFDGRSELSPTQKKLQKEGYTIPSSRVGLGYNPPKPVRITRKW--KVA 526
           DFTTHTEF+SLKI + + +LS TQKKL +EG+ IP SR GLGY  P+P+RITRK   K+ 
Sbjct: 784 DFTTHTEFKSLKIHE-QPKLSSTQKKLLREGHAIPMSRKGLGYKLPEPIRITRKGKEKMV 843

[Close]

BLAST of Spg027429 vs. NCBI nr
Match: KAA0061113.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK03782.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 231.5 bits (589), Expect = 1.7e-56
Identity = 186/513 (36.26%), Postives = 259/513 (50.49%), Query Frame = 0


Query: 63  MLLKMVEEKDQEIASLRNQMESRDVAESKSERDIFQDQLESVENEDERWTLVTRRKKQKK 122
           ++L++  EK      ++  +E     E   E++        +E +DE WT+VTRRKK+K 
Sbjct: 444 LILRLAREK-----KIKLDLEEEVTPEDSQEKE------RLIEEDDEGWTVVTRRKKRKS 503

Query: 123 HSVQREPHMFRNYRRKNMSQKQKRKIKGSRKPKLVVEENQDFVLSRHPVTLKDFFPKNFL 182
             +Q+E  ++ NYRR N +QK K+K K +RK KLV E+++DF  ++  VTL DFFP  FL
Sbjct: 504 TLIQKESRLYINYRRGNKTQKNKKK-KKTRKLKLVHEKDKDFPRTQRVVTLADFFPTRFL 563

Query: 183 NDDHEDIPEIVAC----------------------------------------------- 242
            D  ++ P +VA                                                
Sbjct: 564 GDHQDENPGVVASASSSSAPIATYESTPYCMSIDFSDEDLLLGSKLHNRPLYVSGYVQEQ 623

Query: 243 ----------HAVN------------TLEEGNSSSSPSQNAKKESIEEVDA--------- 302
                      AVN             +EE ++S    Q   + S   +DA         
Sbjct: 624 RVERILVDNGSAVNIMPKSTMRQLGILMEELSNSKLVIQGFNQGSQRVIDAKFYLKNDGS 683

Query: 303 CEVQSKE------------------------ASAHPEKSKAPKEEASSNVPIDAQIANRK 362
            EV S E                         + H  KS+A    A S + +D + +N  
Sbjct: 684 PEVVSVEVPLVNKEDNLQLKSLASRESHKSTGTFHSGKSEASTSTAKSVIVMDEKTSNPP 743

Query: 363 -------CTSQKGESPFTECSEILKVGDVEILKENFTTPLTAITKQEIQESKTDRTKVTL 422
                     +KGESPF E  + LKVGD+E+LKE+FTTPLT ITKQEI   K D  + +L
Sbjct: 744 ILRYVPLSRRKKGESPFVEFPQGLKVGDIEVLKESFTTPLTKITKQEI---KIDLIEASL 803

Query: 423 PERRTKAGFDPNAYKLLEKAGYDFTTHTEFESLKIFDGRSELSPTQKKLQKEGYTIPSSR 465
           P+RRTK GFDP AYK + KAGYDFTTHTEF+SLKI + + +LS TQKKL +EG+ IP SR
Sbjct: 804 PQRRTKDGFDPKAYKSMAKAGYDFTTHTEFKSLKIHE-QPKLSSTQKKLLREGHAIPMSR 863

[Close]

BLAST of Spg027429 vs. NCBI nr
Match: KAA0055891.1 (uncharacterized protein E6C27_scaffold438G00090 [Cucumis melo var. makuwa])

HSP 1 Score: 229.6 bits (584), Expect = 6.4e-56
Identity = 158/355 (44.51%), Postives = 206/355 (58.03%), Query Frame = 0


Query: 187 EDIPEIVACHAVNTLEEGNSSSSPSQNAKKESIEEVDACEVQSKEASAHPEKSKAPKEE- 246
           ED+ EI++     T  +G   +       K+S  + DA   Q    S    K +AP+ E 
Sbjct: 360 EDVSEIISTEVPVT--KGTFKNEQEMITSKKS-NKGDALNSQQNGESTTETKLRAPEAEK 419

Query: 247 ------ASSNVPIDAQIANRKCTSQKGESPFTECSEILKVGDVEILKENFTTPLTAITKQ 306
                   SN+P+   I+  +   +KGESPF ECS+ L V + EILKENFT PLT I K 
Sbjct: 420 IATLQKEVSNLPVLCYISFSR--HKKGESPFAECSKNLTVKNTEILKENFTAPLTKIEKG 479

Query: 307 EIQESKTDRTKVTLPERRTKAGFDPNAYKLLEKAGYDFTTHTEFESLKIFDGRSELSPTQ 366
           E ++ +    +  LPERRT  GFDP AYKL+ KAGYDFTT TE +S+KIFD R ELSPTQ
Sbjct: 480 EAKKIEKKDLEAYLPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFDERPELSPTQ 539

Query: 367 KKLQKEGYTIPSSRVGLGYNPPKPVRIT--RKWKVADAHHITIEEMSDPEDKKNDDSQKI 426
           KKLQK+GY+IP+SR G+GY   +PVRIT  RK KVA+  HIT+EE  D E+ KND SQ+ 
Sbjct: 540 KKLQKQGYSIPNSRAGIGYQSSEPVRITGKRKVKVANTCHITVEESKDSEEGKNDRSQRS 599

Query: 427 SVFDRIKAPTTRLSVHQRLKYSSSEKEGQSKTSAPARRSVFHRLSVSTSKKVDEPS---- 486
           SVFDRI     R SV QR+  S ++   Q  T +  R S F RL+ + +KKV   S    
Sbjct: 600 SVFDRIAFSAIRPSVFQRVSTSIAKDSNQVSTCSSTRLSAFQRLN-TNAKKVQSISPTPT 659

Query: 487 --RSVFDRLRATYGQCKGKLKSFETEESDEMNDNNEFSSTVPSRMKRKPFVLINT 527
             +S F RL  +  + + K       +S  + ++ E  S  PSRMKRK  V +NT
Sbjct: 660 TRKSAFKRLSVSVTRGQKKASISVLNKSSLVTEDEEIRSAFPSRMKRKMSVSVNT 708

[Close]

BLAST of Spg027429 vs. NCBI nr
Match: TYJ98225.1 (uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa])

HSP 1 Score: 225.3 bits (573), Expect = 1.2e-54
Identity = 153/352 (43.47%), Postives = 205/352 (58.24%), Query Frame = 0


Query: 187  EDIPEIVACH---AVNTLEEGNSSSSPSQNAKKESIEEVDACEVQSKEASAHPEKSK-AP 246
            ED+ EI++        T +      +  +++K +++      E+ ++     PE  K A 
Sbjct: 861  EDVSEIISTEVPVTKGTFKNEQEMITSKKSSKGDALNSQQNGELTTETKLRAPEAEKIAT 920

Query: 247  KEEASSNVPIDAQIANRKCTSQKGESPFTECSEILKVGDVEILKENFTTPLTAITKQEIQ 306
             ++  SN P+   I   +   +KGESPFTECS+ L V + EILKENFT PLT I K E +
Sbjct: 921  LQKEVSNPPVLRYIPLSR--RKKGESPFTECSKNLTVKNTEILKENFTAPLTKIEKGEAK 980

Query: 307  ESKTDRTKVTLPERRTKAGFDPNAYKLLEKAGYDFTTHTEFESLKIFDGRSELSPTQKKL 366
            + +    +  LPERRT  GFDP AYKL+ KAGYDFTT TE +S+KIFD R ELSPTQKKL
Sbjct: 981  KIEKKDLQAYLPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFDERPELSPTQKKL 1040

Query: 367  QKEGYTIPSSRVGLGYNPPKPVRITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVF 426
            QK+GY+IP+SR G+GY   +PVRIT K   KVA+  HIT+EE  D E+ K   SQ+ SVF
Sbjct: 1041 QKQGYSIPNSRAGIGYQSSEPVRITGKGKAKVANTCHITVEESKDSEEGKKVRSQRSSVF 1100

Query: 427  DRIKAPTTRLSVHQRLKYSSSEKEGQSKTSAPARRSVFHRLSVSTSKKVDEPS------R 486
            DRI     R SV QR+  S ++   Q  T +  R S F RL+ S +KKV   S      +
Sbjct: 1101 DRIAFSAIRPSVFQRVSTSIAKDSNQVSTCSSTRLSAFQRLNTS-AKKVRSISPTPTTRK 1160

Query: 487  SVFDRLRATYGQCKGKLKSFETEESDEMNDNNEFSSTVPSRMKRKPFVLINT 527
            S F RL  +  + + K     + +S  +  + E  S  PSRMKRK FV +NT
Sbjct: 1161 SAFKRLSVSVTRDQKKASMSVSNKSSLVTGDEEIRSAFPSRMKRKMFVSVNT 1209

[Close]

BLAST of Spg027429 vs. NCBI nr
Match: TYJ98225.1 (uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa])

HSP 1 Score: 63.2 bits (152), Expect = 7.9e-06
Identity = 40/85 (47.06%), Postives = 56/85 (65.88%), Query Frame = 0


Query: 13  IATAEDLMLGKFISSSQQPN-ETSSPDVMSVMMTDAGTSEERMAEVEKKISMLLKMVEEK 72
           I   E+  + +  S S++ N E   P++MSVM+TD  TSE+RM  +EKK++M +K VEE+
Sbjct: 54  IVIKENPAIDEHNSLSERSNEEVPQPNIMSVMVTDVDTSEDRMVVLEKKVNMHMKAVEER 113

Query: 73  DQEIASLRNQMESRDVAESKSERDI 97
           D EIA L+N +ESRD AES     I
Sbjct: 114 DFEIALLKNHIESRDAAESSHTHTI 138

HSP 2 Score: 225.3 bits (573), Expect = 1.2e-54
Identity = 153/352 (43.47%), Postives = 205/352 (58.24%), Query Frame = 0


Query: 187  EDIPEIVACH---AVNTLEEGNSSSSPSQNAKKESIEEVDACEVQSKEASAHPEKSK-AP 246
            ED+ EI++        T +      +  +++K +++      E+ ++     PE  K A 
Sbjct: 883  EDVSEIISTEVPVTKGTFKNEQEMITSKKSSKGDALNSQQNGELTTETKLRAPEAEKIAT 942

Query: 247  KEEASSNVPIDAQIANRKCTSQKGESPFTECSEILKVGDVEILKENFTTPLTAITKQEIQ 306
             ++  SN P+   I   +   +KGESPFTECS+ L V + EILKENFT PLT I K E +
Sbjct: 943  LQKEVSNPPVLRYIPLSR--RKKGESPFTECSKNLTVKNTEILKENFTAPLTKIEKGEAK 1002

Query: 307  ESKTDRTKVTLPERRTKAGFDPNAYKLLEKAGYDFTTHTEFESLKIFDGRSELSPTQKKL 366
            + +    +  LPERRT  GFDP AYKL+ KAGYDFTT TE +S+KIFD R ELSPTQKKL
Sbjct: 1003 KIEKKDLQAYLPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFDERPELSPTQKKL 1062

Query: 367  QKEGYTIPSSRVGLGYNPPKPVRITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVF 426
            QK+GY+IP+SR G+GY   +PVRIT K   KVA+  HIT+EE  D E+ K   SQ+ SVF
Sbjct: 1063 QKQGYSIPNSRAGIGYQSSEPVRITGKGKAKVANTCHITVEESKDSEEGKKVRSQRSSVF 1122

Query: 427  DRIKAPTTRLSVHQRLKYSSSEKEGQSKTSAPARRSVFHRLSVSTSKKVDEPS------R 486
            DRI     R SV QR+  S ++   Q  T +  R S F RL+ S +KKV   S      +
Sbjct: 1123 DRIAFSAIRPSVFQRVSTSIAKDSNQVSTCSSTRLSAFQRLNTS-AKKVRSISPTPTTRK 1182

Query: 487  SVFDRLRATYGQCKGKLKSFETEESDEMNDNNEFSSTVPSRMKRKPFVLINT 527
            S F RL  +  + + K     + +S  +  + E  S  PSRMKRK FV +NT
Sbjct: 1183 SAFKRLSVSVTRDQKKASMSVSNKSSLVTGDEEIRSAFPSRMKRKMFVSVNT 1231

[Close]

BLAST of Spg027429 vs. ExPASy TrEMBL
Match: A0A5D3C0W6 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G002360 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 1.2e-60
Identity = 208/637 (32.65%), Postives = 282/637 (44.27%), Query Frame = 0


Query: 98  QDQLESVENEDERWTLVTRRKKQKKHSVQREPHMFRNYRRKNMSQKQKRKIKGSRKPKLV 157
           Q++   +E +DERWT+VTRRKK+K   +Q+E   +RNYRR N +QK K+K K +RK KL+
Sbjct: 364 QEKERLIEEDDERWTIVTRRKKRKSTPIQKEHRFYRNYRRWNKAQKNKKK-KKTRKLKLM 423

Query: 158 VEENQDFVLSRHPVTLKDFFPKNFLNDDHEDIPEIVACHAVNTLEEG------------- 217
            +E++DF  ++  +TL DFFP  FL D  ++ P +VACHA+N  EE              
Sbjct: 424 HKEDKDFPRTQRLITLADFFPTRFLGDHQDENPGVVACHAINATEEESIPLRSLEEEKVS 483

Query: 218 ---------------------------NSSSSPSQNA----------------------- 277
                                      NS++S S  +                       
Sbjct: 484 KDLSRFNVDDLLSLPQEIKTILINALLNSAASSSSASTVTYESTPYCMSIDFSNDDLLLG 543

Query: 278 ------------------------------------------------------------ 337
                                                                       
Sbjct: 544 SKLHNRPLYVSGYVREQRVDRILVDNGSAVNIMPKSTIRQLGILMKELSNSKLVIQGFNQ 603

Query: 338 ---------------------------------KKESIEEVDACEV-------------- 397
                                            K +S  EV + EV              
Sbjct: 604 GSQRVIDGVKKVEADSNPFSEAESHFADAKFYLKNDSSPEVVSVEVPLVNREDNLQLKSL 663

Query: 398 QSKE-----ASAHPEKSKAPKEEASSNVPIDAQIANRK-------CTSQKGESPFTECSE 457
            SKE      + H EKS+A    A S + +D + +N            +KGESPF E  +
Sbjct: 664 ASKEPHISIGTFHSEKSEASTSTAKSVILMDEKTSNPSILRYVPLSRRKKGESPFVESPQ 723

Query: 458 ILKVGDVEILKENFTTPLTAITKQEIQESKTDRTKVTLPERRTKAGFDPNAYKLLEKAGY 517
            LKVGD+E+LKE+FTTPLT ITKQEI   K D T+ +LP+RRTK  FDP AYKL+ KAGY
Sbjct: 724 GLKVGDIEVLKESFTTPLTKITKQEI---KIDLTEASLPQRRTKDEFDPKAYKLMAKAGY 783

Query: 518 DFTTHTEFESLKIFDGRSELSPTQKKLQKEGYTIPSSRVGLGYNPPKPVRITRKW--KVA 526
           DFTTHTEF+SLKI + + +LS TQKKL +EG+ IP SR GLGY  P+P+RITRK   K+ 
Sbjct: 784 DFTTHTEFKSLKIHE-QPKLSSTQKKLLREGHAIPMSRKGLGYKLPEPIRITRKGKEKMV 843

[Close]

BLAST of Spg027429 vs. ExPASy TrEMBL
Match: A0A5D3BY54 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G001700 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 8.2e-57
Identity = 186/513 (36.26%), Postives = 259/513 (50.49%), Query Frame = 0


Query: 63  MLLKMVEEKDQEIASLRNQMESRDVAESKSERDIFQDQLESVENEDERWTLVTRRKKQKK 122
           ++L++  EK      ++  +E     E   E++        +E +DE WT+VTRRKK+K 
Sbjct: 444 LILRLAREK-----KIKLDLEEEVTPEDSQEKE------RLIEEDDEGWTVVTRRKKRKS 503

Query: 123 HSVQREPHMFRNYRRKNMSQKQKRKIKGSRKPKLVVEENQDFVLSRHPVTLKDFFPKNFL 182
             +Q+E  ++ NYRR N +QK K+K K +RK KLV E+++DF  ++  VTL DFFP  FL
Sbjct: 504 TLIQKESRLYINYRRGNKTQKNKKK-KKTRKLKLVHEKDKDFPRTQRVVTLADFFPTRFL 563

Query: 183 NDDHEDIPEIVAC----------------------------------------------- 242
            D  ++ P +VA                                                
Sbjct: 564 GDHQDENPGVVASASSSSAPIATYESTPYCMSIDFSDEDLLLGSKLHNRPLYVSGYVQEQ 623

Query: 243 ----------HAVN------------TLEEGNSSSSPSQNAKKESIEEVDA--------- 302
                      AVN             +EE ++S    Q   + S   +DA         
Sbjct: 624 RVERILVDNGSAVNIMPKSTMRQLGILMEELSNSKLVIQGFNQGSQRVIDAKFYLKNDGS 683

Query: 303 CEVQSKE------------------------ASAHPEKSKAPKEEASSNVPIDAQIANRK 362
            EV S E                         + H  KS+A    A S + +D + +N  
Sbjct: 684 PEVVSVEVPLVNKEDNLQLKSLASRESHKSTGTFHSGKSEASTSTAKSVIVMDEKTSNPP 743

Query: 363 -------CTSQKGESPFTECSEILKVGDVEILKENFTTPLTAITKQEIQESKTDRTKVTL 422
                     +KGESPF E  + LKVGD+E+LKE+FTTPLT ITKQEI   K D  + +L
Sbjct: 744 ILRYVPLSRRKKGESPFVEFPQGLKVGDIEVLKESFTTPLTKITKQEI---KIDLIEASL 803

Query: 423 PERRTKAGFDPNAYKLLEKAGYDFTTHTEFESLKIFDGRSELSPTQKKLQKEGYTIPSSR 465
           P+RRTK GFDP AYK + KAGYDFTTHTEF+SLKI + + +LS TQKKL +EG+ IP SR
Sbjct: 804 PQRRTKDGFDPKAYKSMAKAGYDFTTHTEFKSLKIHE-QPKLSSTQKKLLREGHAIPMSR 863

[Close]

BLAST of Spg027429 vs. ExPASy TrEMBL
Match: A0A5A7UQP2 (Integrase catalytic domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold438G00090 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 3.1e-56
Identity = 158/355 (44.51%), Postives = 206/355 (58.03%), Query Frame = 0


Query: 187 EDIPEIVACHAVNTLEEGNSSSSPSQNAKKESIEEVDACEVQSKEASAHPEKSKAPKEE- 246
           ED+ EI++     T  +G   +       K+S  + DA   Q    S    K +AP+ E 
Sbjct: 360 EDVSEIISTEVPVT--KGTFKNEQEMITSKKS-NKGDALNSQQNGESTTETKLRAPEAEK 419

Query: 247 ------ASSNVPIDAQIANRKCTSQKGESPFTECSEILKVGDVEILKENFTTPLTAITKQ 306
                   SN+P+   I+  +   +KGESPF ECS+ L V + EILKENFT PLT I K 
Sbjct: 420 IATLQKEVSNLPVLCYISFSR--HKKGESPFAECSKNLTVKNTEILKENFTAPLTKIEKG 479

Query: 307 EIQESKTDRTKVTLPERRTKAGFDPNAYKLLEKAGYDFTTHTEFESLKIFDGRSELSPTQ 366
           E ++ +    +  LPERRT  GFDP AYKL+ KAGYDFTT TE +S+KIFD R ELSPTQ
Sbjct: 480 EAKKIEKKDLEAYLPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFDERPELSPTQ 539

Query: 367 KKLQKEGYTIPSSRVGLGYNPPKPVRIT--RKWKVADAHHITIEEMSDPEDKKNDDSQKI 426
           KKLQK+GY+IP+SR G+GY   +PVRIT  RK KVA+  HIT+EE  D E+ KND SQ+ 
Sbjct: 540 KKLQKQGYSIPNSRAGIGYQSSEPVRITGKRKVKVANTCHITVEESKDSEEGKNDRSQRS 599

Query: 427 SVFDRIKAPTTRLSVHQRLKYSSSEKEGQSKTSAPARRSVFHRLSVSTSKKVDEPS---- 486
           SVFDRI     R SV QR+  S ++   Q  T +  R S F RL+ + +KKV   S    
Sbjct: 600 SVFDRIAFSAIRPSVFQRVSTSIAKDSNQVSTCSSTRLSAFQRLN-TNAKKVQSISPTPT 659

Query: 487 --RSVFDRLRATYGQCKGKLKSFETEESDEMNDNNEFSSTVPSRMKRKPFVLINT 527
             +S F RL  +  + + K       +S  + ++ E  S  PSRMKRK  V +NT
Sbjct: 660 TRKSAFKRLSVSVTRGQKKASISVLNKSSLVTEDEEIRSAFPSRMKRKMSVSVNT 708

[Close]

BLAST of Spg027429 vs. ExPASy TrEMBL
Match: A0A5A7U2W9 (Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold355G00060 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 5.9e-55
Identity = 144/307 (46.91%), Postives = 188/307 (61.24%), Query Frame = 0


Query: 228 QSKEASAHPEKSKAPKEEASSNVPIDAQIANRKCTSQKGESPFTECSEILKVGDVEILKE 287
           +SK  +   EK    ++E  SN  +   I   +C  +KGESPF ECS+ L + + EILKE
Sbjct: 24  ESKLRTLEAEKIATLRKEV-SNPSVLRYIPLSRC--KKGESPFAECSKNLTIKNTEILKE 83

Query: 288 NFTTPLTAITKQEIQESKTDRTKVTLPERRTKAGFDPNAYKLLEKAGYDFTTHTEFESLK 347
           NFT PLT I K E ++ +    +  LPERRT  GFDP AYKL+ KAGYDFTT TE +S+K
Sbjct: 84  NFTAPLTKIEKGEAKKIEKKDLEAYLPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVK 143

Query: 348 IFDGRSELSPTQKKLQKEGYTIPSSRVGLGYNPPKPVRIT--RKWKVADAHHITIEEMSD 407
           IFD R ELSPTQKKLQK+GY+IP+S+ G+GY   +PVRIT   K KVA+  HIT+EE  D
Sbjct: 144 IFDERPELSPTQKKLQKQGYSIPNSKAGIGYQSSEPVRITGKGKTKVANTCHITVEESKD 203

Query: 408 PEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSEKEGQSKTSAPARRSVFHRLSVST 467
            ++ K D SQ+ SVFDRI  P  R SV QR+  S ++   Q  T +  R S F RL+ + 
Sbjct: 204 SKEGKKDRSQRSSVFDRIAFPAIRPSVFQRVSTSITKDSNQVSTCSSTRLSAFQRLN-TN 263

Query: 468 SKKVDEPS------RSVFDRLRATYGQCKGKLKSFETEESDEMNDNNEFSSTVPSRMKRK 527
           +KKV   S      +S F RL  +  + + K     + +S  +  + E  S  PSRMKRK
Sbjct: 264 AKKVQSISPTPTTRKSAFKRLSVSVTRGQKKASISVSNKSSLVTRDEEIRSAFPSRMKRK 323

[Close]

BLAST of Spg027429 vs. ExPASy TrEMBL
Match: A0A5A7TZU9 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 5.9e-55
Identity = 153/352 (43.47%), Postives = 205/352 (58.24%), Query Frame = 0


Query: 187  EDIPEIVACH---AVNTLEEGNSSSSPSQNAKKESIEEVDACEVQSKEASAHPEKSK-AP 246
            ED+ EI++        T +      +  +++K +++      E+ ++     PE  K A 
Sbjct: 883  EDVSEIISTEVPVTKGTFKNEQEMITSKKSSKGDALNSQQNGELTTETKLRAPEAEKIAT 942

Query: 247  KEEASSNVPIDAQIANRKCTSQKGESPFTECSEILKVGDVEILKENFTTPLTAITKQEIQ 306
             ++  SN P+   I   +   +KGESPFTECS+ L V + EILKENFT PLT I K E +
Sbjct: 943  LQKEVSNPPVLRYIPLSR--RKKGESPFTECSKNLTVKNTEILKENFTAPLTKIEKGEAK 1002

Query: 307  ESKTDRTKVTLPERRTKAGFDPNAYKLLEKAGYDFTTHTEFESLKIFDGRSELSPTQKKL 366
            + +    +  LPERRT  GFDP AYKL+ KAGYDFTT TE +S+KIFD R ELSPTQKKL
Sbjct: 1003 KIEKKDLQAYLPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFDERPELSPTQKKL 1062

Query: 367  QKEGYTIPSSRVGLGYNPPKPVRITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVF 426
            QK+GY+IP+SR G+GY   +PVRIT K   KVA+  HIT+EE  D E+ K   SQ+ SVF
Sbjct: 1063 QKQGYSIPNSRAGIGYQSSEPVRITGKGKAKVANTCHITVEESKDSEEGKKVRSQRSSVF 1122

Query: 427  DRIKAPTTRLSVHQRLKYSSSEKEGQSKTSAPARRSVFHRLSVSTSKKVDEPS------R 486
            DRI     R SV QR+  S ++   Q  T +  R S F RL+ S +KKV   S      +
Sbjct: 1123 DRIAFSAIRPSVFQRVSTSIAKDSNQVSTCSSTRLSAFQRLNTS-AKKVRSISPTPTTRK 1182

Query: 487  SVFDRLRATYGQCKGKLKSFETEESDEMNDNNEFSSTVPSRMKRKPFVLINT 527
            S F RL  +  + + K     + +S  +  + E  S  PSRMKRK FV +NT
Sbjct: 1183 SAFKRLSVSVTRDQKKASMSVSNKSSLVTGDEEIRSAFPSRMKRKMFVSVNT 1231

The following BLAST results are available for this feature:

BLAST of Spg027429 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK05005.1	2.5e-60	32.65	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0061113.1	1.7e-56	36.26	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK03782.1 ty3-gyp...	[more]
KAA0055891.1	6.4e-56	44.51	uncharacterized protein E6C27_scaffold438G00090 [Cucumis melo var. makuwa]	[more]
TYJ98225.1	1.2e-54	43.47	uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa]	[more]
TYJ98225.1	7.9e-06	47.06	uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa]	[more]

Pages

BLAST of Spg027429 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg027429 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C0W6	1.2e-60	32.65	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3BY54	8.2e-57	36.26	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7UQP2	3.1e-56	44.51	Integrase catalytic domain-containing protein OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5A7U2W9	5.9e-55	46.91	Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A5A7TZU9	5.9e-55	43.47	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940...	[more]

Pages

BLAST of Spg027429 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 87..107
None	No IPR available	COILS	Coil	Coil	coord: 54..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 401..419
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 431..459
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 216..244
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 443..459
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 202..255
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 401..420

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg027429.1	Spg027429.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090304	nucleic acid metabolic process