Spg027399 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg027399
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold7: 41916729 .. 41918333 (-)
RNA-Seq Expression	Spg027399
Synteny	Spg027399

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCTATGGTTTGCAAAAGTCATGGCCTACCAGATTAGAGATGAACAGGCTGAAGGAAGTAGAAAGTGAGGCTAAGAGGAATAAAATTGAAGAAGAAAAGCAAGCTGCTTTAGTCTTCGCAGTCGCTTGCCTGAAGGACTCAATGGATACCACAGAGAAAGAAGAAGAAGAATTTGTGCCCGTTTCTAAGGGTTATTCAAAAGATTTTGCAGGAGATTTTGCAGCCGCAAATGTGGTGGAAATAGAGCCAGAAACTGAGATTGCACTAGATCCTGAAGTGCATTCTAATGTGCAATCCCCACCACCACCAAAAGAGGATGAAAATGTGTTCGATGACCTGTTCAAACACCAGAATGAGGCAATATTCGAGGACCTATTCGAACATGGGCAAGAAGAGGAGCAACAAGCTCCAATTGATGAAGAAGAGGTCCTTGAAATCTCAAGGGACCAAATGCCCAAGAGGGGCAGAAACGAAGATGATGGCAGTGCAGCTGAAGGGAAGGCTAAGAAGAGGAAAAGAGTAGATAGTTCCCTTTGGAGGCCAAGCACTCGGGGAGCGACTTCTGTGCTTCCCCAAGCAAAGACACCACCATCACCGCCACCTATGAGGAGAGAACAATATGTTCCTCAGCCGAATAAGACTCCAACAAAGAGGCCGAGAGTTGAAGCTCACCCAGACGCTCAGACCCAACTGGCTATCATGAAGAAACGGGTCTTGACGTGTGAAAAGGAATTCTCCATAAAGACAAGTCCTCTCCCAACATTCATAGAGGATATTTTACGCAGGTATGGCTGGGAGCAGCTATGTAAAGAGCCAAAGAATGCATCTATCTCATTGGTATGAGAGTTCTATGTGCAAATAGGGGAAGAGATGCAAACGACCATGCTTCTACGTGGTCGAGTGGTGGACTTTTCAGCAAGGAAGATAAATCAGATATTTCGACTGTCATCCCTCAAATACCCAGCTGGAAACAAGGCCATTGAAGAACCAATTGATGAACAGTTGGCCAAGGCCCTTCAGATGGTGGCCCACGAGGGAATTAAGTGGCAGGAGTCCAGAACTGAAGTCAGAACTCTACTGTCAGGAGATTTGAAGCCATAAGTAGTTGTCAGGATGTACGTGATAAAGAATAGAATAATGCCAACAACACATGACACCATAATATCTCAAGAACGTGTCATGTAGTTGCACAACATGCACAAGGGATTGGATTTGAACCTTGGACGAATTATATGGATGGAGATCCTCTCTTGTGGGCACAAGAATGTGGGAAGGCTATTCTTCCCAACCTTGGTCACCAAGATATGCAGACTTGCAGGGATAAAGCCGGAGGAAAAAGAAGAAAAAGAAGTTGTCCAGACTTCGATTGACTTGAGCTTAATCAAAAAGCTCATAGCCAATTCCAAGGAGAATGTGACTTCACCTAAAAAGAAGGCTCAAGCAACCTTTCCTGCAACTCAATCACAAAATCTTCTGAAGACGCCACAACTGCAGCAGGTGATAAGAACTGTAAAATCATCACAGAATTTACAAGATGCGACCGCAAGTCAACAGCAACCTCTAGTCCCTCAACCACAACCTGAATTTGATTTGGTGGTTTAA

mRNA sequence

ATGCTCTATGGTTTGCAAAAGTCATGGCCTACCAGATTAGAGATGAACAGGCTGAAGGAAGTAGAAAGTGAGGCTAAGAGGAATAAAATTGAAGAAGAAAAGCAAGCTGCTTTAGTCTTCGCAGTCGCTTGCCTGAAGGACTCAATGGATACCACAGAGAAAGAAGAAGAAGAATTTGTGCCCGTTTCTAAGGGTTATTCAAAAGATTTTGCAGGAGATTTTGCAGCCGCAAATGTGGTGGAAATAGAGCCAGAAACTGAGATTGCACTAGATCCTGAAGTGCATTCTAATGTGCAATCCCCACCACCACCAAAAGAGGATGAAAATGTGTTCGATGACCTGTTCAAACACCAGAATGAGGCAATATTCGAGGACCTATTCGAACATGGGCAAGAAGAGGAGCAACAAGCTCCAATTGATGAAGAAGAGGTCCTTGAAATCTCAAGGGACCAAATGCCCAAGAGGGGCAGAAACGAAGATGATGGCAGTGCAGCTGAAGGGAAGGCTAAGAAGAGGAAAAGAGTAGATAGTTCCCTTTGGAGGCCAAGCACTCGGGGAGCGACTTCTGTGCTTCCCCAAGCAAAGACACCACCATCACCGCCACCTATGAGGAGAGAACAATATGTTCCTCAGCCGAATAAGACTCCAACAAAGAGGCCGAGAGTTGAAGCTCACCCAGACGCTCAGACCCAACTGGCTATCATGAAGAAACGGGTCTTGACGTGTGAAAAGGAATTCTCCATAAAGACAAGGGAAGAGATGCAAACGACCATGCTTCTACGTGGTCGAGTGGTGGACTTTTCAGCAAGGAAGATAAATCAGATATTTCGACTGTCATCCCTCAAATACCCAGCTGGAAACAAGGCCATTGAAGAACCAATTGATGAACAGTTGGCCAAGGCCCTTCAGATGGTGGCCCACGAGGGAATTAAGTGGCAGGAGTCCAGAACTGAATTGCACAACATGCACAAGGGATTGGATTTGAACCTTGGACGAATTATATGGATGGAGATCCTCTCTTGTGGGCACAAGAATGTGGGAAGGCTATTCTTCCCAACCTTGGTCACCAAGATATGCAGACTTGCAGGGATAAAGCCGGAGGAAAAAGAAGAAAAAGAAGTTGTCCAGACTTCGATTGACTTGAGCTTAATCAAAAAGCTCATAGCCAATTCCAAGGAGAATGTGACTTCACCTAAAAAGAAGGCTCAAGCAACCTTTCCTGCAACTCAATCACAAAATCTTCTGAAGACGCCACAACTGCAGCAGGTGATAAGAACTGTAAAATCATCACAGAATTTACAAGATGCGACCGCAAGTCAACAGCAACCTCTAGTCCCTCAACCACAACCTGAATTTGATTTGGTGGTTTAA

Coding sequence (CDS)

ATGCTCTATGGTTTGCAAAAGTCATGGCCTACCAGATTAGAGATGAACAGGCTGAAGGAAGTAGAAAGTGAGGCTAAGAGGAATAAAATTGAAGAAGAAAAGCAAGCTGCTTTAGTCTTCGCAGTCGCTTGCCTGAAGGACTCAATGGATACCACAGAGAAAGAAGAAGAAGAATTTGTGCCCGTTTCTAAGGGTTATTCAAAAGATTTTGCAGGAGATTTTGCAGCCGCAAATGTGGTGGAAATAGAGCCAGAAACTGAGATTGCACTAGATCCTGAAGTGCATTCTAATGTGCAATCCCCACCACCACCAAAAGAGGATGAAAATGTGTTCGATGACCTGTTCAAACACCAGAATGAGGCAATATTCGAGGACCTATTCGAACATGGGCAAGAAGAGGAGCAACAAGCTCCAATTGATGAAGAAGAGGTCCTTGAAATCTCAAGGGACCAAATGCCCAAGAGGGGCAGAAACGAAGATGATGGCAGTGCAGCTGAAGGGAAGGCTAAGAAGAGGAAAAGAGTAGATAGTTCCCTTTGGAGGCCAAGCACTCGGGGAGCGACTTCTGTGCTTCCCCAAGCAAAGACACCACCATCACCGCCACCTATGAGGAGAGAACAATATGTTCCTCAGCCGAATAAGACTCCAACAAAGAGGCCGAGAGTTGAAGCTCACCCAGACGCTCAGACCCAACTGGCTATCATGAAGAAACGGGTCTTGACGTGTGAAAAGGAATTCTCCATAAAGACAAGGGAAGAGATGCAAACGACCATGCTTCTACGTGGTCGAGTGGTGGACTTTTCAGCAAGGAAGATAAATCAGATATTTCGACTGTCATCCCTCAAATACCCAGCTGGAAACAAGGCCATTGAAGAACCAATTGATGAACAGTTGGCCAAGGCCCTTCAGATGGTGGCCCACGAGGGAATTAAGTGGCAGGAGTCCAGAACTGAATTGCACAACATGCACAAGGGATTGGATTTGAACCTTGGACGAATTATATGGATGGAGATCCTCTCTTGTGGGCACAAGAATGTGGGAAGGCTATTCTTCCCAACCTTGGTCACCAAGATATGCAGACTTGCAGGGATAAAGCCGGAGGAAAAAGAAGAAAAAGAAGTTGTCCAGACTTCGATTGACTTGAGCTTAATCAAAAAGCTCATAGCCAATTCCAAGGAGAATGTGACTTCACCTAAAAAGAAGGCTCAAGCAACCTTTCCTGCAACTCAATCACAAAATCTTCTGAAGACGCCACAACTGCAGCAGGTGATAAGAACTGTAAAATCATCACAGAATTTACAAGATGCGACCGCAAGTCAACAGCAACCTCTAGTCCCTCAACCACAACCTGAATTTGATTTGGTGGTTTAA

Protein sequence

MLYGLQKSWPTRLEMNRLKEVESEAKRNKIEEEKQAALVFAVACLKDSMDTTEKEEEEFVPVSKGYSKDFAGDFAAANVVEIEPETEIALDPEVHSNVQSPPPPKEDENVFDDLFKHQNEAIFEDLFEHGQEEEQQAPIDEEEVLEISRDQMPKRGRNEDDGSAAEGKAKKRKRVDSSLWRPSTRGATSVLPQAKTPPSPPPMRREQYVPQPNKTPTKRPRVEAHPDAQTQLAIMKKRVLTCEKEFSIKTREEMQTTMLLRGRVVDFSARKINQIFRLSSLKYPAGNKAIEEPIDEQLAKALQMVAHEGIKWQESRTELHNMHKGLDLNLGRIIWMEILSCGHKNVGRLFFPTLVTKICRLAGIKPEEKEEKEVVQTSIDLSLIKKLIANSKENVTSPKKKAQATFPATQSQNLLKTPQLQQVIRTVKSSQNLQDATASQQQPLVPQPQPEFDLVV

Homology

[Close]

BLAST of Spg027399 vs. NCBI nr
Match: PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii])

HSP 1 Score: 58.2 bits (139), Expect = 2.2e-04
Identity = 55/220 (25.00%), Postives = 88/220 (40.00%), Query Frame = 0


Query: 244 KEFSIKTREEMQTTMLLRGRVVDFSARKINQIFRLSSLKYPAGNKAIEEPIDEQLAKALQ 303
           +EF     +  + T+ +RG  V +S   IN +F L        ++ I+    + L   L+
Sbjct: 88  REFYANLTDPEENTVYVRGVQVSWSEEAINAVFGLGD-PVDEHSEFIQNITQQDLITVLE 147

Query: 304 MVAHEGIKWQESRTE----------------------------------------LHNMH 363
            VA  G +W  S                                           LH+M 
Sbjct: 148 TVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKTVSKDRMLLLHSML 207

Query: 364 KGLDLNLGRIIWMEILSCGHKNVGRLFFPTLVTKICRLAGIKPEEKEEKEVVQTSIDLSL 423
            G  +N+GR+I  EI +C  +  G LFFP+L+T++CR A       EEK      ID   
Sbjct: 208 IGKSINVGRMIHSEIRACAARKTGALFFPSLITRLCRNARAPFLVNEEKLHNTGEIDAIA 267

[Close]

BLAST of Spg027399 vs. NCBI nr
Match: PON35554.1 (hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii])

HSP 1 Score: 58.2 bits (139), Expect = 2.2e-04
Identity = 55/220 (25.00%), Postives = 89/220 (40.45%), Query Frame = 0


Query: 244 KEFSIKTREEMQTTMLLRGRVVDFSARKINQIFRLSSLKYPAGNKAIEEPIDEQLAKALQ 303
           +EF     + ++ T+ +RG  V +S   IN +F L        ++ IE   +  L   L+
Sbjct: 79  REFYANLTDPVENTVYVRGVQVSWSEEAINAVFGLGD-PVDEHSEFIENITEHDLITVLE 138

Query: 304 MVAHEGIKWQESRTE----------------------------------------LHNMH 363
            VA  G +W  S                                           LH+M 
Sbjct: 139 TVAVAGAEWNVSAQGAYTCIRSALTPAAKVWFHFLKSHLLPTTHGKTVSKDRMLLLHSML 198

Query: 364 KGLDLNLGRIIWMEILSCGHKNVGRLFFPTLVTKICRLAGIKPEEKEEKEVVQTSIDLSL 423
            G  +N+GR+I  EI +C  +  G LFFP+L+T++CR A       EEK      ID   
Sbjct: 199 IGKSINVGRMIHSEIRACAARKTGALFFPSLITRLCRNARAPFLVNEEKLHNTGEIDAIA 258

[Close]

BLAST of Spg027399 vs. NCBI nr
Match: PON78020.1 (hypothetical protein PanWU01x14_023740 [Parasponia andersonii])

HSP 1 Score: 57.8 bits (138), Expect = 2.9e-04
Identity = 63/254 (24.80%), Postives = 105/254 (41.34%), Query Frame = 0


Query: 231 QLAIMKKRV--LTCEKEFSIKTREEMQTTMLLRGRVVDFSARKINQIFRLSSLKYPAGNK 290
           QL  + +R+  L   +EF     +  + T+ +RG  V +S   IN +F L        ++
Sbjct: 3   QLPFIAQRIQFLPLVREFYANLTDPEENTIYVRGVQVSWSEEAINAVFGLGD-PVDEHSE 62

Query: 291 AIEEPIDEQLAKALQMVAHEGIKWQESRTE------------------------------ 350
            IE   + +L   L+ VA  G +W  S                                 
Sbjct: 63  FIENITEPELITVLETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHG 122

Query: 351 ----------LHNMHKGLDLNLGRIIWMEILSCGHKNVGRLFFPTLVTKICRLAGIKPEE 410
                     LH+M  G  +N+GR+I  EI +C  +  G LFFP+L+T++CR A      
Sbjct: 123 KIVSKDRMLLLHSMLNGKSINVGRMIHSEIRACAAQKTGALFFPSLITRLCRNAPFL--V 182

Query: 411 KEEKEVVQTSIDLSLIKKLIANSKENVTSPKKKAQATFPATQSQNLLKTPQLQQVIRTVK 443
            EEK      ID   + ++   ++E  T   ++  ++ PA  S +      LQQ ++ ++
Sbjct: 183 NEEKLHNTGEIDAIAVARI---TQEGPTESTQQPSSSRPAAASSSRTNGDVLQQ-LKALE 242

[Close]

BLAST of Spg027399 vs. ExPASy TrEMBL
Match: A0A2P5AGA5 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_335450 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.1e-04
Identity = 55/220 (25.00%), Postives = 89/220 (40.45%), Query Frame = 0


Query: 244 KEFSIKTREEMQTTMLLRGRVVDFSARKINQIFRLSSLKYPAGNKAIEEPIDEQLAKALQ 303
           +EF     + ++ T+ +RG  V +S   IN +F L        ++ IE   +  L   L+
Sbjct: 79  REFYANLTDPVENTVYVRGVQVSWSEEAINAVFGLGD-PVDEHSEFIENITEHDLITVLE 138

Query: 304 MVAHEGIKWQESRTE----------------------------------------LHNMH 363
            VA  G +W  S                                           LH+M 
Sbjct: 139 TVAVAGAEWNVSAQGAYTCIRSALTPAAKVWFHFLKSHLLPTTHGKTVSKDRMLLLHSML 198

Query: 364 KGLDLNLGRIIWMEILSCGHKNVGRLFFPTLVTKICRLAGIKPEEKEEKEVVQTSIDLSL 423
            G  +N+GR+I  EI +C  +  G LFFP+L+T++CR A       EEK      ID   
Sbjct: 199 IGKSINVGRMIHSEIRACAARKTGALFFPSLITRLCRNARAPFLVNEEKLHNTGEIDAIA 258

[Close]

BLAST of Spg027399 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.1e-04
Identity = 55/220 (25.00%), Postives = 88/220 (40.00%), Query Frame = 0


Query: 244 KEFSIKTREEMQTTMLLRGRVVDFSARKINQIFRLSSLKYPAGNKAIEEPIDEQLAKALQ 303
           +EF     +  + T+ +RG  V +S   IN +F L        ++ I+    + L   L+
Sbjct: 88  REFYANLTDPEENTVYVRGVQVSWSEEAINAVFGLGD-PVDEHSEFIQNITQQDLITVLE 147

Query: 304 MVAHEGIKWQESRTE----------------------------------------LHNMH 363
            VA  G +W  S                                           LH+M 
Sbjct: 148 TVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKTVSKDRMLLLHSML 207

Query: 364 KGLDLNLGRIIWMEILSCGHKNVGRLFFPTLVTKICRLAGIKPEEKEEKEVVQTSIDLSL 423
            G  +N+GR+I  EI +C  +  G LFFP+L+T++CR A       EEK      ID   
Sbjct: 208 IGKSINVGRMIHSEIRACAARKTGALFFPSLITRLCRNARAPFLVNEEKLHNTGEIDAIA 267

[Close]

BLAST of Spg027399 vs. ExPASy TrEMBL
Match: A0A2P5DXM3 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.4e-04
Identity = 63/254 (24.80%), Postives = 105/254 (41.34%), Query Frame = 0


Query: 231 QLAIMKKRV--LTCEKEFSIKTREEMQTTMLLRGRVVDFSARKINQIFRLSSLKYPAGNK 290
           QL  + +R+  L   +EF     +  + T+ +RG  V +S   IN +F L        ++
Sbjct: 3   QLPFIAQRIQFLPLVREFYANLTDPEENTIYVRGVQVSWSEEAINAVFGLGD-PVDEHSE 62

Query: 291 AIEEPIDEQLAKALQMVAHEGIKWQESRTE------------------------------ 350
            IE   + +L   L+ VA  G +W  S                                 
Sbjct: 63  FIENITEPELITVLETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHG 122

Query: 351 ----------LHNMHKGLDLNLGRIIWMEILSCGHKNVGRLFFPTLVTKICRLAGIKPEE 410
                     LH+M  G  +N+GR+I  EI +C  +  G LFFP+L+T++CR A      
Sbjct: 123 KIVSKDRMLLLHSMLNGKSINVGRMIHSEIRACAAQKTGALFFPSLITRLCRNAPFL--V 182

Query: 411 KEEKEVVQTSIDLSLIKKLIANSKENVTSPKKKAQATFPATQSQNLLKTPQLQQVIRTVK 443
            EEK      ID   + ++   ++E  T   ++  ++ PA  S +      LQQ ++ ++
Sbjct: 183 NEEKLHNTGEIDAIAVARI---TQEGPTESTQQPSSSRPAAASSSRTNGDVLQQ-LKALE 242

[Close]

BLAST of Spg027399 vs. ExPASy TrEMBL
Match: W9RPD1 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_026905 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 9.1e-04
Identity = 34/101 (33.66%), Postives = 58/101 (57.43%), Query Frame = 0


Query: 306 AHEGIKWQESRTELHNMHKGLDLNLGRIIWMEILSC-GHKNVGRLFFPTLVTKICRLAGI 365
           +H  +  +E    LH M KG  LN+GR+I  ++  C GH+N G L+FP+L+T++C   G+
Sbjct: 27  SHYRLVHKERAILLHCMMKGRPLNVGRMIHQQVGVCAGHRN-GGLWFPSLITQLCIAHGV 86

Query: 366 KPEEKEEKEVVQTSIDLSLIKKLI-ANSKENVTSPKKKAQA 405
             E+ E KE    +I   ++ +L+  +++E   +P   A A
Sbjct: 87  SVEKHETKEPPSAAISTFVLARLLHDDAQEEEAAPAPAANA 126

The following BLAST results are available for this feature:

BLAST of Spg027399 vs. NCBI nr


Match Name	E-value	Identity	Description
PON46472.1	2.2e-04	25.00	hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]	[more]
PON35554.1	2.2e-04	25.00	hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]	[more]
PON78020.1	2.9e-04	24.80	hypothetical protein PanWU01x14_023740 [Parasponia andersonii]	[more]

BLAST of Spg027399 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg027399 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2P5AGA5	1.1e-04	25.00	Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1...	[more]
A0A2P5BCG4	1.1e-04	25.00	Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1...	[more]
A0A2P5DXM3	1.4e-04	24.80	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE...	[more]
W9RPD1	9.1e-04	33.66	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_026905 PE=4 SV=1	[more]

BLAST of Spg027399 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 15..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..134
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 90..225
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 142..179

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg027399.1	Spg027399.1	mRNA