Spg026714 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg026714
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Ty3-gypsy retrotransposon protein
Location	scaffold6: 19756406 .. 19758274 (-)
RNA-Seq Expression	Spg026714
Synteny	Spg026714

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGGATCCCAAGAAAAATATGATTCCATCGAAGATGAGAACGAAGGTTGGACCCTTGTCGTTCGTCGCAAAAAGCAAAAACAAAGTTACGCACAGAAAGAGTCCCGCCTATTTCGAGATAGTAAAAGAAAGGTTAAGTCTCAAAGAAAGAAGGGAGAAAAGAAGACAAGGAGGTCAAAGCCTGTCGTGAAGGAAAGTGAAGATTTCTTTTACACTCCACAACCCATAACTTTGGCAGAATACTTCCCAAGGCGCTTTCTCGATGATAGTCAAGGAGAGACACTTGAAACTGTCACGTGTCACATTGTGGACGTGGTGGAAGATGATGATGTCCCTGCTAGCTTCTCAAGAACAGTGGCAGGTCCAGGAGTCTTATCCTCCTTCAGCATAAAGGACTTATTATCACTTCCTCAGGAAGCTAAAAGTATCCTTATTAATGCATTGATAGAGTCTGATGGTACAAACATCCCAACCTCCGAGGCACGCACATGTGCTTCGTGTTGCATGTCTATAGGATTTTTTGATGAAGATTTGCTACTAGGGTCGAAGACTCATAATAGACCTTTATTCGTCTCGGGATACATCCTAGAACAAAGGGTTAGTCGGATCCTCATCGATGATGGATCAGTCGTCAATATAATGCCTAAGTCAACCATGAAGCAATTAGGCATCTCGATGGAAGAACTATCAAACAGTAAATTGGTGATTCAAGGTTTCAATCAAGGCGGACAACGATCGATTGGCATGATACGCCTCGAGCTCATCATTGGGAATTTGAAGGCCGATACTCTGTTTCATGTGATAGATTCCAAGACCACTTATAAGCTGTTATTATGTTGCCCTTGGATCCATGGCAATGGAGTGATAACTTCTACATTGCACCAGTGCTTCAAATTCTATCAAGATGGCATTAGAAAAGTTGAAGCTGACACTAACCCATTCTCAGAAGCTGAATCCCATTTCGCTGATGCAAAATTTTATATGAAGAACGAAAACACAGGGAAAACTATACCTGCAGAGATCCCCTTGATAAAAAAGAATGAGAAACTCAATTTAGAACCACAAGCTGATGCAAGAAAGGAAGTTGTTGAAGATGTGGAGGCATCTGACCTGAAAAAGGGTGAAACATCTACAAGCCTTGTGAAACCTAAGGTTGTAAAGGATGAGAAATGTTCAAATTCACCTATCCTACAATACATCCCTTTATCTCGACGTAAAAAGGGTGAATCACCTTTCACAGAATGTCCAAAAAACTTAAAGGTCGGTGACGTTGAGATTCTGAAGGAAAGTTTCACTACACCTCTTACAAAGATTACAAAGCAAGAGGTTAAGAAACCTGAGAATGACCAGATGAAGATAATGTTGCCTGAAAAACGGACTAAAGACGGGTTCGACCCCAAGGCATATAAACTTCTAGCGAAAGCGCGTTATGATTTCACAACTCACACTGAGTTTAAAAGTCTATGGGCTTTTTATGAAAGATCTGAGCTCTCTGCAACACAGAAGAAACTTCTAAAGGAAGGTTATAGTCTGCCTACAACGAGAAAAGGGCTTGGATATAAGTCGCCAGAGCCGGTTCGCATAACAAGAAGAGGGAAGGCGAAAGTGACAGACACAAATCATATAACAGTAGAGGAGGTTGATGACTCAAAAGAAAAAGAGAGTGTCGACCAACGAACTTCTAGTTTTAGGCGCATCAGGCCACCAGTTGCTCGTGCTTTAGTCTTTAAGAGATTAAGTGTCAATGAAACGGAAGAAGAAAGCGCACAACCTACCAATAGCTCCACTCGACCTTCAGTTTTTCGAAGGTTAAGTATGCCCATTGGGGAAGAAGAGAGTACACACTACAAGAAAAGAGGGCTTTAG

mRNA sequence

ATGAAGGGATCCCAAGAAAAATATGATTCCATCGAAGATGAGAACGAAGGTTGGACCCTTGTCGTTCGTCGCAAAAAGCAAAAACAAAGTTACGCACAGAAAGAGTCCCGCCTATTTCGAGATAGTAAAAGAAAGGTTAAGTCTCAAAGAAAGAAGGGAGAAAAGAAGACAAGGAGGTCAAAGCCTGTCGTGAAGGAAAGTGAAGATTTCTTTTACACTCCACAACCCATAACTTTGGCAGAATACTTCCCAAGGCGCTTTCTCGATGATAGTCAAGGAGAGACACTTGAAACTGTCACGTGTCACATTGTGGACGTGGTGGAAGATGATGATGTCCCTGCTAGCTTCTCAAGAACAGTGGCAGGTCCAGGAGTCTTATCCTCCTTCAGCATAAAGGACTTATTATCACTTCCTCAGGAAGCTAAAAGTATCCTTATTAATGCATTGATAGAGTCTGATGAACCACAAGCTGATGCAAGAAAGGAAGTTGTTGAAGATGTGGAGGCATCTGACCTGAAAAAGGGTTATAGTCTGCCTACAACGAGAAAAGGGCTTGGATATAAGTCGCCAGAGCCGGTTCGCATAACAAGAAGAGGGAAGGCGAAAGTGACAGACACAAATCATATAACAGTAGAGGAGGTTGATGACTCAAAAGAAAAAGAGAGTGTCGACCAACGAACTTCTAGTTTTAGGCGCATCAGGCCACCAGTTGCTCGTGCTTTAGTCTTTAAGAGATTAAGTGTCAATGAAACGGAAGAAGAAAGCGCACAACCTACCAATAGCTCCACTCGACCTTCAGTTTTTCGAAGGTTAAGTATGCCCATTGGGGAAGAAGAGAGTACACACTACAAGAAAAGAGGGCTTTAG

Coding sequence (CDS)

ATGAAGGGATCCCAAGAAAAATATGATTCCATCGAAGATGAGAACGAAGGTTGGACCCTTGTCGTTCGTCGCAAAAAGCAAAAACAAAGTTACGCACAGAAAGAGTCCCGCCTATTTCGAGATAGTAAAAGAAAGGTTAAGTCTCAAAGAAAGAAGGGAGAAAAGAAGACAAGGAGGTCAAAGCCTGTCGTGAAGGAAAGTGAAGATTTCTTTTACACTCCACAACCCATAACTTTGGCAGAATACTTCCCAAGGCGCTTTCTCGATGATAGTCAAGGAGAGACACTTGAAACTGTCACGTGTCACATTGTGGACGTGGTGGAAGATGATGATGTCCCTGCTAGCTTCTCAAGAACAGTGGCAGGTCCAGGAGTCTTATCCTCCTTCAGCATAAAGGACTTATTATCACTTCCTCAGGAAGCTAAAAGTATCCTTATTAATGCATTGATAGAGTCTGATGAACCACAAGCTGATGCAAGAAAGGAAGTTGTTGAAGATGTGGAGGCATCTGACCTGAAAAAGGGTTATAGTCTGCCTACAACGAGAAAAGGGCTTGGATATAAGTCGCCAGAGCCGGTTCGCATAACAAGAAGAGGGAAGGCGAAAGTGACAGACACAAATCATATAACAGTAGAGGAGGTTGATGACTCAAAAGAAAAAGAGAGTGTCGACCAACGAACTTCTAGTTTTAGGCGCATCAGGCCACCAGTTGCTCGTGCTTTAGTCTTTAAGAGATTAAGTGTCAATGAAACGGAAGAAGAAAGCGCACAACCTACCAATAGCTCCACTCGACCTTCAGTTTTTCGAAGGTTAAGTATGCCCATTGGGGAAGAAGAGAGTACACACTACAAGAAAAGAGGGCTTTAG

Protein sequence

MKGSQEKYDSIEDENEGWTLVVRRKKQKQSYAQKESRLFRDSKRKVKSQRKKGEKKTRRSKPVVKESEDFFYTPQPITLAEYFPRRFLDDSQGETLETVTCHIVDVVEDDDVPASFSRTVAGPGVLSSFSIKDLLSLPQEAKSILINALIESDEPQADARKEVVEDVEASDLKKGYSLPTTRKGLGYKSPEPVRITRRGKAKVTDTNHITVEEVDDSKEKESVDQRTSSFRRIRPPVARALVFKRLSVNETEEESAQPTNSSTRPSVFRRLSMPIGEEESTHYKKRGL

Homology

[Close]

BLAST of Spg026714 vs. NCBI nr
Match: TYK05005.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 123.6 bits (309), Expect = 2.7e-24
Identity = 141/545 (25.87%), Postives = 188/545 (34.50%), Query Frame = 0


Query: 4   SQEKYDSIEDENEGWTLVVRRKKQKQSYAQKESRLFRDSKRKVKSQRKKGEKKTRRSKPV 63
           SQEK   IE+++E WT+V RRKK+K +  QKE R +R+ +R  K+Q+ K +KKTR+ K +
Sbjct: 363 SQEKERLIEEDDERWTIVTRRKKRKSTPIQKEHRFYRNYRRWNKAQKNKKKKKTRKLKLM 422

Query: 64  VKESEDFFYTPQPITLAEYFPRRFLDDSQGETLETVTCHIVDVVEDDDVPASFSRTVAGP 123
            KE +DF  T + ITLA++FP RFL D Q E    V CH ++  E++ +P          
Sbjct: 423 HKEDKDFPRTQRLITLADFFPTRFLGDHQDENPGVVACHAINATEEESIPLRSLEEEKVS 482

Query: 124 GVLSSFSIKDLLSLPQEAKSILINALI--------------------------------- 183
             LS F++ DLLSLPQE K+ILINAL+                                 
Sbjct: 483 KDLSRFNVDDLLSLPQEIKTILINALLNSAASSSSASTVTYESTPYCMSIDFSNDDLLLG 542

Query: 184 ------------------------------------------------------------ 243
                                                                       
Sbjct: 543 SKLHNRPLYVSGYVREQRVDRILVDNGSAVNIMPKSTIRQLGILMKELSNSKLVIQGFNQ 602

Query: 244 --------------------ESDEPQADAR--------KEVV------------------ 274
                               E++   ADA+         EVV                  
Sbjct: 603 GSQRVIDGVKKVEADSNPFSEAESHFADAKFYLKNDSSPEVVSVEVPLVNREDNLQLKSL 662

[Close]

BLAST of Spg026714 vs. NCBI nr
Match: KAA0056780.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYJ97603.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 122.9 bits (307), Expect = 4.6e-24
Identity = 72/151 (47.68%), Postives = 102/151 (67.55%), Query Frame = 0


Query: 5   QEKYDSIEDENEGWTLVVRRKKQKQSYAQKESRLFRDSKRKVKSQRKKGEKKTRRSKPVV 64
           QEK  SIE ++EGWT+V RRKK+K +  QKE R +R+ +R  K+Q+ K +KKT++ K + 
Sbjct: 93  QEKERSIEKDDEGWTIVTRRKKRKSTLIQKEPRFYRNYRRGNKTQKNKKKKKTQKLKLIN 152

Query: 65  KESEDFFYTPQPITLAEYFPRRFLDDSQGETLETVTCHIVDVVEDDDVPASFSRTVAGPG 124
           +E +DF  T + +TLA +FP RFL D Q E  E V CH +D +E++ +P    R++   G
Sbjct: 153 EEDKDFPRTQRLVTLANFFPTRFLCDHQDENPEVVACHAIDAIEEESIPL---RSLEEEG 212

Query: 125 V---LSSFSIKDLLSLPQEAKSILINALIES 153
           V   L  F++ DLLSLPQE K+ILINAL+ S
Sbjct: 213 VSKDLLRFNVDDLLSLPQETKTILINALLNS 240

[Close]

BLAST of Spg026714 vs. NCBI nr
Match: KAA0039557.1 (uncharacterized protein E6C27_scaffold744G00270 [Cucumis melo var. makuwa] >TYK01742.1 uncharacterized protein E5676_scaffold775G00710 [Cucumis melo var. makuwa])

HSP 1 Score: 122.5 bits (306), Expect = 6.0e-24
Identity = 72/159 (45.28%), Postives = 106/159 (66.67%), Query Frame = 0


Query: 4   SQEKYDSIEDENEGWTLVVRRKKQKQSYAQKESRLFRDSKRKVKSQRKKGEKKTRRSKPV 63
           SQEK   IE+++EGWT+V RRKK+K +  QKE R +R+ ++  K+Q+ K +KKTR+ K +
Sbjct: 116 SQEKERLIEEDDEGWTIVTRRKKRKSTLIQKEHRFYRNYRKGNKAQKNKKKKKTRKLKLM 175

Query: 64  VKESEDFFYTPQPITLAEYFPRRFLDDSQGETLETVTCHIVDVVEDDDVPASFSRTVAGP 123
            +E +DF  T + +TLA++FP RFL D Q E    V CH ++ +E++++P    R++   
Sbjct: 176 HEEDKDFPQTQRLVTLADFFPTRFLGDHQDENPRVVECHAINAIEEENIPL---RSLEEE 235

Query: 124 GV---LSSFSIKDLLSLPQEAKSILINALIESDEPQADA 160
           GV   LS F++ DLLSLPQE K ILINAL+ S    + A
Sbjct: 236 GVSKDLSRFNVNDLLSLPQETKIILINALLNSTASSSSA 271

[Close]

BLAST of Spg026714 vs. NCBI nr
Match: KAA0039557.1 (uncharacterized protein E6C27_scaffold744G00270 [Cucumis melo var. makuwa] >TYK01742.1 uncharacterized protein E5676_scaffold775G00710 [Cucumis melo var. makuwa])

HSP 1 Score: 118.2 bits (295), Expect = 1.1e-22
Identity = 61/108 (56.48%), Postives = 81/108 (75.00%), Query Frame = 0


Query: 172 LKKGYSLPTTRKGLGYKSPEPVRITRRGKAKVTDTNHITVEEVDDSKEKESVDQRTSSFR 231
           L++G+ +P +RKGLGYKSPEP+RITR+GK KV D+NHITV+EVD  +E E   QRTS+F 
Sbjct: 592 LREGHVIPMSRKGLGYKSPEPIRITRKGKEKVVDSNHITVKEVDSMEEYEGDSQRTSAFD 651

Query: 232 RIRPPVARALVFKRLSVNETEEESAQPTNSSTRPSVFRRLSMPIGEEE 280
           RI P VAR  VF+RLS+ E E +  Q T++  R SVF+RL++   EE+
Sbjct: 652 RISPHVARTPVFERLSMTEAERKDHQSTSNLDRRSVFQRLTITFKEEK 699

HSP 2 Score: 121.7 bits (304), Expect = 1.0e-23
Identity = 65/112 (58.04%), Postives = 82/112 (73.21%), Query Frame = 0


Query: 172  LKKGYSLPTTRKGLGYKSPEPVRITRRGKAKVTDTNHITVEEVDDSKEKESVDQRTSSFR 231
            L++G+S+P +RKGLGYKSPEP+RIT++GK KV D NHIT+EE D++  KE  +QR S F 
Sbjct: 1059 LREGHSIPVSRKGLGYKSPEPIRITKKGKEKVVDINHITIEEDDNTDVKEGDNQRISVFD 1118

Query: 232  RIRPPVARALVFKRLSVNETEEESAQPTNSSTRPSVFRRL-SMPIGEEESTH 283
            RIRP VAR +VF+RLS+ E E E  Q   S  R SVFRRL + PI EE + H
Sbjct: 1119 RIRPSVARPVVFERLSMTEAERERLQSVPSLERHSVFRRLTTTPIKEESTCH 1170

[Close]

BLAST of Spg026714 vs. NCBI nr
Match: XP_031735972.1 (uncharacterized protein LOC116401693 [Cucumis sativus])

HSP 1 Score: 101.7 bits (252), Expect = 1.1e-17
Identity = 61/145 (42.07%), Postives = 95/145 (65.52%), Query Frame = 0


Query: 11  IEDENEGWTLVVRRKKQKQSYAQKESRLFRDSKRKVKSQRKKGEKKTRRSKPVVKESEDF 70
           IE+++EGW +V  RKK++    Q+ESR +++ +R  K+Q+ K +KKT + K V  E  +F
Sbjct: 569 IEEDDEGWIVVTHRKKRQSIPTQRESRSYQNYRRGNKTQKNKKKKKTHKLKLVHNEDMNF 628

Query: 71  FYTPQPITLAEYFPRRFLDDSQGETLETVTCHIVDVVEDDDVPASFSRTVAGPGV---LS 130
               + +TLA++ P+ FL D Q E  E V CH ++  E++ +P    R++ G GV   LS
Sbjct: 629 SRPQRLVTLADFLPKSFLCDHQDEDPEVVACHAINTTEEEIIP---PRSLEGEGVSKDLS 688

Query: 131 SFSIKDLLSLPQEAKSILINALIES 153
            F+++DLLSLPQE K+ILI+AL+ S
Sbjct: 689 RFNVEDLLSLPQETKTILIDALLNS 710

HSP 2 Score: 121.7 bits (304), Expect = 1.0e-23
Identity = 65/112 (58.04%), Postives = 82/112 (73.21%), Query Frame = 0


Query: 172 LKKGYSLPTTRKGLGYKSPEPVRITRRGKAKVTDTNHITVEEVDDSKEKESVDQRTSSFR 231
           L++G+S+P +RKGLGYKSPEP+RIT++GK KV D NHIT+EE D++  KE  +QR S F 
Sbjct: 221 LREGHSIPVSRKGLGYKSPEPIRITKKGKEKVVDINHITIEEDDNTDVKEGDNQRISVFD 280

Query: 232 RIRPPVARALVFKRLSVNETEEESAQPTNSSTRPSVFRRL-SMPIGEEESTH 283
           RIRP VAR +VF+RLS+ E E E  Q   S  R SVFRRL + PI EE + H
Sbjct: 281 RIRPSVARPVVFERLSMTEAERERLQSVPSLERHSVFRRLTTTPIKEESTCH 332

[Close]

BLAST of Spg026714 vs. ExPASy TrEMBL
Match: A0A5D3C0W6 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G002360 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.3e-24
Identity = 141/545 (25.87%), Postives = 188/545 (34.50%), Query Frame = 0


Query: 4   SQEKYDSIEDENEGWTLVVRRKKQKQSYAQKESRLFRDSKRKVKSQRKKGEKKTRRSKPV 63
           SQEK   IE+++E WT+V RRKK+K +  QKE R +R+ +R  K+Q+ K +KKTR+ K +
Sbjct: 363 SQEKERLIEEDDERWTIVTRRKKRKSTPIQKEHRFYRNYRRWNKAQKNKKKKKTRKLKLM 422

Query: 64  VKESEDFFYTPQPITLAEYFPRRFLDDSQGETLETVTCHIVDVVEDDDVPASFSRTVAGP 123
            KE +DF  T + ITLA++FP RFL D Q E    V CH ++  E++ +P          
Sbjct: 423 HKEDKDFPRTQRLITLADFFPTRFLGDHQDENPGVVACHAINATEEESIPLRSLEEEKVS 482

Query: 124 GVLSSFSIKDLLSLPQEAKSILINALI--------------------------------- 183
             LS F++ DLLSLPQE K+ILINAL+                                 
Sbjct: 483 KDLSRFNVDDLLSLPQEIKTILINALLNSAASSSSASTVTYESTPYCMSIDFSNDDLLLG 542

Query: 184 ------------------------------------------------------------ 243
                                                                       
Sbjct: 543 SKLHNRPLYVSGYVREQRVDRILVDNGSAVNIMPKSTIRQLGILMKELSNSKLVIQGFNQ 602

Query: 244 --------------------ESDEPQADAR--------KEVV------------------ 274
                               E++   ADA+         EVV                  
Sbjct: 603 GSQRVIDGVKKVEADSNPFSEAESHFADAKFYLKNDSSPEVVSVEVPLVNREDNLQLKSL 662

[Close]

BLAST of Spg026714 vs. ExPASy TrEMBL
Match: A0A5D3BE72 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold690G00360 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 2.2e-24
Identity = 72/151 (47.68%), Postives = 102/151 (67.55%), Query Frame = 0


Query: 5   QEKYDSIEDENEGWTLVVRRKKQKQSYAQKESRLFRDSKRKVKSQRKKGEKKTRRSKPVV 64
           QEK  SIE ++EGWT+V RRKK+K +  QKE R +R+ +R  K+Q+ K +KKT++ K + 
Sbjct: 93  QEKERSIEKDDEGWTIVTRRKKRKSTLIQKEPRFYRNYRRGNKTQKNKKKKKTQKLKLIN 152

Query: 65  KESEDFFYTPQPITLAEYFPRRFLDDSQGETLETVTCHIVDVVEDDDVPASFSRTVAGPG 124
           +E +DF  T + +TLA +FP RFL D Q E  E V CH +D +E++ +P    R++   G
Sbjct: 153 EEDKDFPRTQRLVTLANFFPTRFLCDHQDENPEVVACHAIDAIEEESIPL---RSLEEEG 212

Query: 125 V---LSSFSIKDLLSLPQEAKSILINALIES 153
           V   L  F++ DLLSLPQE K+ILINAL+ S
Sbjct: 213 VSKDLLRFNVDDLLSLPQETKTILINALLNS 240

[Close]

BLAST of Spg026714 vs. ExPASy TrEMBL
Match: A0A5D3BSG5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold775G00710 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 2.9e-24
Identity = 72/159 (45.28%), Postives = 106/159 (66.67%), Query Frame = 0


Query: 4   SQEKYDSIEDENEGWTLVVRRKKQKQSYAQKESRLFRDSKRKVKSQRKKGEKKTRRSKPV 63
           SQEK   IE+++EGWT+V RRKK+K +  QKE R +R+ ++  K+Q+ K +KKTR+ K +
Sbjct: 116 SQEKERLIEEDDEGWTIVTRRKKRKSTLIQKEHRFYRNYRKGNKAQKNKKKKKTRKLKLM 175

Query: 64  VKESEDFFYTPQPITLAEYFPRRFLDDSQGETLETVTCHIVDVVEDDDVPASFSRTVAGP 123
            +E +DF  T + +TLA++FP RFL D Q E    V CH ++ +E++++P    R++   
Sbjct: 176 HEEDKDFPQTQRLVTLADFFPTRFLGDHQDENPRVVECHAINAIEEENIPL---RSLEEE 235

Query: 124 GV---LSSFSIKDLLSLPQEAKSILINALIESDEPQADA 160
           GV   LS F++ DLLSLPQE K ILINAL+ S    + A
Sbjct: 236 GVSKDLSRFNVNDLLSLPQETKIILINALLNSTASSSSA 271

[Close]

BLAST of Spg026714 vs. ExPASy TrEMBL
Match: A0A5D3BSG5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold775G00710 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 5.5e-23
Identity = 61/108 (56.48%), Postives = 81/108 (75.00%), Query Frame = 0


Query: 172 LKKGYSLPTTRKGLGYKSPEPVRITRRGKAKVTDTNHITVEEVDDSKEKESVDQRTSSFR 231
           L++G+ +P +RKGLGYKSPEP+RITR+GK KV D+NHITV+EVD  +E E   QRTS+F 
Sbjct: 592 LREGHVIPMSRKGLGYKSPEPIRITRKGKEKVVDSNHITVKEVDSMEEYEGDSQRTSAFD 651

Query: 232 RIRPPVARALVFKRLSVNETEEESAQPTNSSTRPSVFRRLSMPIGEEE 280
           RI P VAR  VF+RLS+ E E +  Q T++  R SVF+RL++   EE+
Sbjct: 652 RISPHVARTPVFERLSMTEAERKDHQSTSNLDRRSVFQRLTITFKEEK 699

HSP 2 Score: 120.9 bits (302), Expect = 8.5e-24
Identity = 119/408 (29.17%), Postives = 168/408 (41.18%), Query Frame = 0


Query: 4   SQEKYDSIEDENEGWTLVVRRKKQKQSYAQKESRLFRDSKRKVKSQRKKGEKKTRRSKPV 63
           SQ K  SIE+++E W +V RRKK+K +  QKES  + + +R  K+++ K +KKTR+ K V
Sbjct: 13  SQVKERSIEEDDEWWIVVTRRKKRKSTPTQKESCFYINYRRGNKAKKNKKKKKTRKPKLV 72

Query: 64  VKESEDFFYTPQP---ITLAEYFPRRFLDDSQGETLETVTCHIVDVVEDDDVPASFSRTV 123
            +E +DF   P+P   +TL ++FP R L D Q E LE V CH ++ +E++ +    SR++
Sbjct: 73  HEEDKDF---PRPQCLVTLVDFFPTRLLYDHQNENLEVVECHAINAIEEESI---LSRSL 132

Query: 124 AGPGVL---SSFSIKDLLSLPQEAKSILINALIES------------------------- 183
              GV    S  ++ DLLSLPQE K+ LINAL+ S                         
Sbjct: 133 EEEGVSKDPSRSNVDDLLSLPQETKTDLINALLNSVASSSSTPIATYESLPYYMSINFSD 192

Query: 184 ----------DEP----------------------------------------------- 243
                     + P                                               
Sbjct: 193 DDLLLGSKLHNRPLYVSGYFREQRVDRILIDNGSGINVMLKSTMRQLGILMEEFSNSKLV 252

[Close]

BLAST of Spg026714 vs. ExPASy TrEMBL
Match: A0A5A7UDR5 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold131G00770 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.1e-23
Identity = 72/159 (45.28%), Postives = 105/159 (66.04%), Query Frame = 0


Query: 4   SQEKYDSIEDENEGWTLVVRRKKQKQSYAQKESRLFRDSKRKVKSQRKKGEKKTRRSKPV 63
           SQEK   IE+++EGWT+V RRKK+K +  QK+ R +++ +R  K+Q+ K +KKTR+ K V
Sbjct: 150 SQEKERLIEEDDEGWTIVTRRKKRKSTLIQKKPRFYKNYRRGNKAQKNKKKKKTRKVKLV 209

Query: 64  VKESEDFFYTPQPITLAEYFPRRFLDDSQGETLETVTCHIVDVVEDDDVPASFSRTVAGP 123
            +E +DF  T + +TLA++FP RFL D Q E    V CH ++  E++ +P    R++   
Sbjct: 210 HEEDKDFPRTQRLVTLADFFPTRFLGDHQDENPGVVACHAINTTEEESIPL---RSLEEE 269

Query: 124 GV---LSSFSIKDLLSLPQEAKSILINALIESDEPQADA 160
           GV   LS F++ DLLSLPQE K+ILINAL+ S    + A
Sbjct: 270 GVSKGLSRFNVDDLLSLPQETKTILINALLNSTTSSSSA 305

The following BLAST results are available for this feature:

BLAST of Spg026714 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK05005.1	2.7e-24	25.87	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0056780.1	4.6e-24	47.68	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYJ97603.1 ty3-gyp...	[more]
KAA0039557.1	6.0e-24	45.28	uncharacterized protein E6C27_scaffold744G00270 [Cucumis melo var. makuwa] >TYK0...	[more]
KAA0039557.1	1.1e-22	56.48	uncharacterized protein E6C27_scaffold744G00270 [Cucumis melo var. makuwa] >TYK0...	[more]
XP_031735972.1	1.1e-17	42.07	uncharacterized protein LOC116401693 [Cucumis sativus]	[more]

BLAST of Spg026714 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg026714 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C0W6	1.3e-24	25.87	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3BE72	2.2e-24	47.68	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3BSG5	2.9e-24	45.28	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3BSG5	5.5e-23	56.48	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7UDR5	1.1e-23	45.28	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]

BLAST of Spg026714 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 284..288
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 252..268
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 249..288
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..42

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg026714.1	Spg026714.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090304	nucleic acid metabolic process