Spg026251 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCGGATCAAAAGTAATGAGGATTCTTCTTCTTTGGATAGAAATCGACGGTGGTCTCCTCCGAATGGCGTATTTTGGAAGCTTAACTCTGATGCTGCATGTTCGAAAGAGGTCTCGATGACAAGTCTTGGGATGATCTGCAGAAATTTTGAGGGTAAAGTTATGGTAGTTGCGTCAAAGGCTTTGGACGTGAGGTTGGAGGCCCATATTGCTCAATTATGGGCCATCCTTGAAGGTTTAAAGCTGGTTATTTCATTGGGCTGCACTATGTTAGTTGTGGAGTCCGATTGTCAACTTGCTATCAATTTCATCAATAAGGTTTCTCTTATTTGGTCAGATTCAGAGGCCATAGTTCTGTCTATTTGGAGCCTCTTACCTTTTTTTTAGGGATATCTCTTTCAATTTTGCTCCTAGATCTTGTAATAGGGTTGCCCATGAGATTGCTCGATATGGGAAATATGTAAATAGCCATGACGTTTGGGTCTCTAATTTCTCAAACTGGATGTGTATGTGGGTCGAGTATGACCGTTCATTTTTAGCCCATGTGGCGTTATAATATGAGGTATTATTTTTCAAAAAAAAAAAAAAAAAAAGCTTAAGGTTCCTTAAAGAGTGAAAGTTTTCCTCTAGACTTTTGCTTACAAGAATTCAAATTCTCGTTGATCACTTTTTTTTTTTTTTTTTATAGAAAACCAGCTTTCATGGAGAAAACATGAAAGAATACAAGGGCATACAAAAAGACCAAGCCCATAGAAGGGAGTCCTCTTAAAGGAAGGGGCTCCAATCCAATAAGAAAAGACCTAAAGGATAATTACAAAATAAATTTGTAACCGAGGCCCAAAAGGAAGCATGGAATCTGGATAAAGACCATACATCGCCCGGGCTTCTAACTATCCCCCTAAACACTCTGTTATTTCTCTCCCCCCATAAGTTCCATAAGAGCGCACACATGTCGGCCTACCATAAAAATCTTCCTTTGCCATGGAGGGTCAGATTGAGGAGGAACTCTTGACACTCTCAGATCTAGGTAGTTGATCCGTTGCTGCCCAAACGCATCAAAGAAAAGGTCCCAACGGGAGCGAACAAAGTCACAGCTCCAAAGAATATGATCCAAATCTTCCTCCACCTTCTGACAAAGGATGGAACAAAAGGGGCCAAACAAATGGGCATTCCTTCTCAAGAGCCTACCAAAGGTATTAACCCTACCATGGAGAACTTTCCAGACAAAAATCCTTACCTTCTTCGACACTTTCACCTTCCACATGAAAGAAAAGATAGACTTGCTATAGGGAGGATGATTCAACAAAGAAGTGAAGTAGGATTTACATGAGAACCCGACAGAAGGATCAGGGCTTCAACAACGAAAATCTCTCCTCCCCAACCAAAAGATAGACTCGCATTTTTGGAATGCTCCTTGACTATATCTTCGAGCTCAAACTCTCGAAGATATAGTTGTTGATCACCCAAGTCTTTTCAGATTGTGGTATCAAGTTAGTTGGTCCAGACTTTTGCAAAATCTTTTGGAATGTCTACGTGCACAGTGATGTGGATATTGTCCTTCCTGAACTCTCATTAAGTGAGTGGATCAAGGGAAAGGCTAGGTTCACGTGGAAGAGTGCGGCTAGAACTATTCCTTTGGTCTCTTTGGATTGA ATGCGGATCAAAAGTAATGAGGATTCTTCTTCTTTGGATAGAAATCGACGGTGGTCTCCTCCGAATGGCGTATTTTGGAAGCTTAACTCTGATGCTGCATGTTCGAAAGAGGTCTCGATGACAAGTCTTGGGATGATCTGCAGAAATTTTGAGGGTAAAGTTATGGTAGTTGCGTCAAAGGCTTTGGACGTGAGGTTGGAGGCCCATATTGCTCAATTATGGGCCATCCTTGAAGGTTTAAAGCTGGTTATTTCATTGGGCTGCACTATGTTAGTTGTGGAGTCCGATTGTCAACTTGCTATCAATTTCATCAATAAGGTAGTTGATCCGTTGCTGCCCAAACGCATCAAAGAAAAGGTCCCAACGGGAGCGAACAAAGTCACAGCTCCAAAGAATATGATCCAAATCTTCCTCCACCTTCTGACAAAGGATGGAACAAAAGGGGCCAAACAAATGGGCATTCCTTCTCAAGAGCCTACCAAAGATTGTGGTATCAAGTTAGTTGGTCCAGACTTTTGCAAAATCTTTTGGAATGTCTACGTGCACAGTGATGTGGATATTGTCCTTCCTGAACTCTCATTAAGTGAGTGGATCAAGGGAAAGGCTAGGTTCACGTGGAAGAGTGCGGCTAGAACTATTCCTTTGGTCTCTTTGGATTGA ATGCGGATCAAAAGTAATGAGGATTCTTCTTCTTTGGATAGAAATCGACGGTGGTCTCCTCCGAATGGCGTATTTTGGAAGCTTAACTCTGATGCTGCATGTTCGAAAGAGGTCTCGATGACAAGTCTTGGGATGATCTGCAGAAATTTTGAGGGTAAAGTTATGGTAGTTGCGTCAAAGGCTTTGGACGTGAGGTTGGAGGCCCATATTGCTCAATTATGGGCCATCCTTGAAGGTTTAAAGCTGGTTATTTCATTGGGCTGCACTATGTTAGTTGTGGAGTCCGATTGTCAACTTGCTATCAATTTCATCAATAAGGTAGTTGATCCGTTGCTGCCCAAACGCATCAAAGAAAAGGTCCCAACGGGAGCGAACAAAGTCACAGCTCCAAAGAATATGATCCAAATCTTCCTCCACCTTCTGACAAAGGATGGAACAAAAGGGGCCAAACAAATGGGCATTCCTTCTCAAGAGCCTACCAAAGATTGTGGTATCAAGTTAGTTGGTCCAGACTTTTGCAAAATCTTTTGGAATGTCTACGTGCACAGTGATGTGGATATTGTCCTTCCTGAACTCTCATTAAGTGAGTGGATCAAGGGAAAGGCTAGGTTCACGTGGAAGAGTGCGGCTAGAACTATTCCTTTGGTCTCTTTGGATTGA MRIKSNEDSSSLDRNRRWSPPNGVFWKLNSDAACSKEVSMTSLGMICRNFEGKVMVVASKALDVRLEAHIAQLWAILEGLKLVISLGCTMLVVESDCQLAINFINKVVDPLLPKRIKEKVPTGANKVTAPKNMIQIFLHLLTKDGTKGAKQMGIPSQEPTKDCGIKLVGPDFCKIFWNVYVHSDVDIVLPELSLSEWIKGKARFTWKSAARTIPLVSLD Homology
BLAST of Spg026251 vs. NCBI nr
Match: XP_040996092.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC121242268 [Juglans microcarpa x Juglans regia]) HSP 1 Score: 76.6 bits (187), Expect = 2.9e-10 Identity = 40/93 (43.01%), Postives = 58/93 (62.37%), Query Frame = 0
BLAST of Spg026251 vs. NCBI nr
Match: OMO72757.1 (hypothetical protein CCACVL1_17615 [Corchorus capsularis]) HSP 1 Score: 70.9 bits (172), Expect = 1.6e-08 Identity = 39/89 (43.82%), Postives = 53/89 (59.55%), Query Frame = 0
BLAST of Spg026251 vs. NCBI nr
Match: XP_023888246.1 (uncharacterized protein LOC112000364 [Quercus suber]) HSP 1 Score: 68.6 bits (166), Expect = 7.9e-08 Identity = 36/102 (35.29%), Postives = 58/102 (56.86%), Query Frame = 0
BLAST of Spg026251 vs. NCBI nr
Match: XP_024037110.1 (uncharacterized protein LOC112097050 [Citrus clementina] >XP_024037144.1 uncharacterized protein LOC112097050 [Citrus clementina] >XP_024037175.1 uncharacterized protein LOC112097050 [Citrus clementina]) HSP 1 Score: 67.0 bits (162), Expect = 2.3e-07 Identity = 37/89 (41.57%), Postives = 51/89 (57.30%), Query Frame = 0
BLAST of Spg026251 vs. NCBI nr
Match: XP_018815747.1 (uncharacterized protein LOC108987311 [Juglans regia] >KAF5465179.1 hypothetical protein F2P56_015208 [Juglans regia]) HSP 1 Score: 67.0 bits (162), Expect = 2.3e-07 Identity = 37/103 (35.92%), Postives = 60/103 (58.25%), Query Frame = 0
BLAST of Spg026251 vs. ExPASy TrEMBL
Match: A0A1R3HQR7 (Ribonuclease H OS=Corchorus capsularis OX=210143 GN=CCACVL1_17615 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 7.7e-09 Identity = 39/89 (43.82%), Postives = 53/89 (59.55%), Query Frame = 0
BLAST of Spg026251 vs. ExPASy TrEMBL
Match: A0A1S8ABJ9 (Ribonuclease H-like superfamily protein (Fragment) OS=Citrus limon OX=2708 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 1.1e-07 Identity = 37/89 (41.57%), Postives = 51/89 (57.30%), Query Frame = 0
BLAST of Spg026251 vs. ExPASy TrEMBL
Match: A0A2I4E8M5 (uncharacterized protein LOC108987311 OS=Juglans regia OX=51240 GN=LOC108987311 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 1.1e-07 Identity = 37/103 (35.92%), Postives = 60/103 (58.25%), Query Frame = 0
BLAST of Spg026251 vs. ExPASy TrEMBL
Match: A0A6J1DJL6 (uncharacterized protein LOC111021711 OS=Momordica charantia OX=3673 GN=LOC111021711 PE=4 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 1.4e-07 Identity = 39/105 (37.14%), Postives = 60/105 (57.14%), Query Frame = 0
BLAST of Spg026251 vs. ExPASy TrEMBL
Match: A0A6J1BQ49 (uncharacterized protein LOC111004786 OS=Momordica charantia OX=3673 GN=LOC111004786 PE=4 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 2.5e-07 Identity = 43/100 (43.00%), Postives = 55/100 (55.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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