Spg024840 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGGAAGTAAGCGAATCAATCGGAAATGGAGGATCAACTCGTTGGAGCTAGCGGCAATTAAGGAAGGGCTAGAGGCGTACCTGTCTCTGGTTCGAAGAGGGCGTGGCGCGTTGATCGTTGAAGCGGACGCCATGGAGGTGATTAAAGCTCTAAATTTTGAAATCAGCGATATCTCCGAAGCCAAGGCAATCGTGATTGATATTGAGGATCTGGCGACTAGGTTGGGAGATGTTTCCTTCGTAAAATGCCCAAGAGAGGGCAATAGAGTGGCGCACTGTCTTGCGCGAGCTGCAGCGGGATTTCTGCAGCTTTCTTCTCCGTCGACCGGTGCTGTGGACAGCTTTTCTGACTGTATTTCTTCTTCTTCCATGCTGGAAGGGTCTACTTTTTGTAGGGAAGCTTTTATTCCCATTTGGTTATCCTCGCTGATCTCTGAGGATGGTAGTTGTAACGAACCCTTTCGTGTTTAA ATGGCCGGAAGTAAGCGAATCAATCGGAAATGGAGGATCAACTCGTTGGAGCTAGCGGCAATTAAGGAAGGGCTAGAGGCGTACCTGTCTCTGGTTCGAAGAGGGCGTGGCGCGTTGATCGTTGAAGCGGACGCCATGGAGGTGATTAAAGCTCTAAATTTTGAAATCAGCGATATCTCCGAAGCCAAGGCAATCGTGATTGATATTGAGGATCTGGCGACTAGGTTGGGAGATGTTTCCTTCGTAAAATGCCCAAGAGAGGGCAATAGAGTGGCGCACTGTCTTGCGCGAGCTGCAGCGGGATTTCTGCAGCTTTCTTCTCCGTCGACCGGTGCTGTGGACAGCTTTTCTGACTGTATTTCTTCTTCTTCCATGCTGGAAGGGTCTACTTTTTGTAGGGAAGCTTTTATTCCCATTTGGTTATCCTCGCTGATCTCTGAGGATGGTAGTTGTAACGAACCCTTTCGTGTTTAA ATGGCCGGAAGTAAGCGAATCAATCGGAAATGGAGGATCAACTCGTTGGAGCTAGCGGCAATTAAGGAAGGGCTAGAGGCGTACCTGTCTCTGGTTCGAAGAGGGCGTGGCGCGTTGATCGTTGAAGCGGACGCCATGGAGGTGATTAAAGCTCTAAATTTTGAAATCAGCGATATCTCCGAAGCCAAGGCAATCGTGATTGATATTGAGGATCTGGCGACTAGGTTGGGAGATGTTTCCTTCGTAAAATGCCCAAGAGAGGGCAATAGAGTGGCGCACTGTCTTGCGCGAGCTGCAGCGGGATTTCTGCAGCTTTCTTCTCCGTCGACCGGTGCTGTGGACAGCTTTTCTGACTGTATTTCTTCTTCTTCCATGCTGGAAGGGTCTACTTTTTGTAGGGAAGCTTTTATTCCCATTTGGTTATCCTCGCTGATCTCTGAGGATGGTAGTTGTAACGAACCCTTTCGTGTTTAA MAGSKRINRKWRINSLELAAIKEGLEAYLSLVRRGRGALIVEADAMEVIKALNFEISDISEAKAIVIDIEDLATRLGDVSFVKCPREGNRVAHCLARAAAGFLQLSSPSTGAVDSFSDCISSSSMLEGSTFCREAFIPIWLSSLISEDGSCNEPFRV Homology
BLAST of Spg024840 vs. NCBI nr
Match: XP_024195627.1 (uncharacterized protein LOC112198738 [Rosa chinensis]) HSP 1 Score: 57.4 bits (137), Expect = 1.3e-04 Identity = 32/81 (39.51%), Postives = 50/81 (61.73%), Query Frame = 0
BLAST of Spg024840 vs. NCBI nr
Match: KAG8379865.1 (hypothetical protein BUALT_Bualt07G0133800 [Buddleja alternifolia]) HSP 1 Score: 57.0 bits (136), Expect = 1.7e-04 Identity = 32/85 (37.65%), Postives = 46/85 (54.12%), Query Frame = 0
BLAST of Spg024840 vs. NCBI nr
Match: XP_023887146.1 (uncharacterized protein LOC111999255 [Quercus suber]) HSP 1 Score: 56.2 bits (134), Expect = 2.9e-04 Identity = 37/93 (39.78%), Postives = 49/93 (52.69%), Query Frame = 0
BLAST of Spg024840 vs. NCBI nr
Match: XP_023889222.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC112001275 [Quercus suber]) HSP 1 Score: 55.1 bits (131), Expect = 6.5e-04 Identity = 40/110 (36.36%), Postives = 55/110 (50.00%), Query Frame = 0
BLAST of Spg024840 vs. NCBI nr
Match: VAI60256.1 (unnamed protein product [Triticum turgidum subsp. durum]) HSP 1 Score: 54.7 bits (130), Expect = 8.4e-04 Identity = 37/81 (45.68%), Postives = 47/81 (58.02%), Query Frame = 0
BLAST of Spg024840 vs. ExPASy TrEMBL
Match: A0A446WJF0 (RNase H domain-containing protein OS=Triticum turgidum subsp. durum OX=4567 GN=TRITD_6Bv1G167780 PE=4 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 4.1e-04 Identity = 37/81 (45.68%), Postives = 47/81 (58.02%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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